AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0170010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170010 MtrunA17_Chr1g0187241 96.687 483 16 0 1 483 111 593 0.0 968
Msa0170010 MtrunA17_Chr1g0166711 81.053 475 87 2 3 476 112 584 0.0 783
Msa0170010 MtrunA17_Chr1g0166731 79.830 471 92 2 2 471 8 476 0.0 765
Msa0170010 MtrunA17_Chr1g0166791 70.613 473 135 2 3 473 111 581 0.0 712
Msa0170010 MtrunA17_Chr1g0166741 68.763 477 138 3 1 475 112 579 0.0 667
Msa0170010 MtrunA17_Chr1g0166771 67.086 477 146 3 1 475 76 543 0.0 653
Msa0170010 MtrunA17_Chr7g0261661 61.635 477 176 4 4 475 1 475 0.0 627
Msa0170010 MtrunA17_Chr7g0261811 61.603 474 177 4 3 473 114 585 0.0 619
Msa0170010 MtrunA17_Chr7g0261881 59.213 483 190 4 3 480 114 594 0.0 615
Msa0170010 MtrunA17_Chr7g0261771 60.291 481 185 4 3 481 118 594 0.0 608
Msa0170010 MtrunA17_Chr7g0261791 56.198 484 205 4 1 479 114 595 0.0 567
Msa0170010 MtrunA17_Chr7g0261851 60.965 456 174 3 3 456 115 568 0.0 557
Msa0170010 MtrunA17_Chr3g0114501 48.958 480 234 5 3 477 109 582 1.27e-155 454
Msa0170010 MtrunA17_Chr7g0261751 53.944 393 141 4 3 357 118 508 6.56e-146 427
Msa0170010 MtrunA17_Chr8g0375311 44.760 458 241 4 3 453 127 579 2.41e-138 410
Msa0170010 MtrunA17_Chr3g0104011 45.591 465 238 7 3 459 109 566 8.21e-136 403
Msa0170010 MtrunA17_Chr8g0375291 43.929 453 242 3 3 448 127 574 3.13e-132 395
Msa0170010 MtrunA17_Chr7g0241741 42.612 467 253 6 3 462 109 567 4.12e-131 391
Msa0170010 MtrunA17_Chr8g0375351 41.304 460 254 4 3 453 127 579 5.90e-129 386
Msa0170010 MtrunA17_Chr8g0375341 41.048 458 258 3 3 453 127 579 8.55e-126 378
Msa0170010 MtrunA17_Chr4g0005901 42.082 461 252 6 3 456 119 571 1.52e-125 377
Msa0170010 MtrunA17_Chr8g0375321 40.393 458 261 3 3 453 124 576 1.96e-125 377
Msa0170010 MtrunA17_Chr8g0375331 41.266 458 257 3 3 453 111 563 3.87e-124 373
Msa0170010 MtrunA17_Chr8g0375361 42.576 458 251 3 3 453 126 578 3.35e-121 366
Msa0170010 MtrunA17_Chr5g0422881 41.685 463 256 8 3 456 107 564 3.21e-120 364
Msa0170010 MtrunA17_Chr3g0112611 40.302 464 258 9 1 456 117 569 4.87e-115 351
Msa0170010 MtrunA17_Chr7g0240381 39.525 463 255 8 1 456 114 558 6.17e-114 348
Msa0170010 MtrunA17_Chr5g0399061 39.957 463 265 5 3 456 114 572 1.93e-113 346
Msa0170010 MtrunA17_Chr3g0112671 37.474 475 267 7 1 469 118 568 1.98e-111 341
Msa0170010 MtrunA17_Chr4g0008651 38.013 463 268 7 1 456 119 569 2.78e-111 341
Msa0170010 MtrunA17_Chr3g0142091 40.426 470 261 9 3 466 113 569 2.59e-108 333
Msa0170010 MtrunA17_Chr5g0400371 37.723 448 265 5 16 453 212 655 4.71e-108 335
Msa0170010 MtrunA17_Chr7g0261731 63.675 234 82 2 3 235 118 349 6.91e-108 324
Msa0170010 MtrunA17_Chr3g0077151 39.110 427 239 6 36 456 132 543 1.29e-107 330
Msa0170010 MtrunA17_Chr1g0213711 37.199 457 271 6 3 453 108 554 3.96e-107 330
Msa0170010 MtrunA17_Chr7g0214461 37.740 469 274 7 3 463 165 623 1.25e-106 330
Msa0170010 MtrunA17_Chr7g0218851 37.716 464 273 7 16 472 146 600 1.26e-106 329
Msa0170010 MtrunA17_Chr4g0056431 39.630 487 279 5 3 479 112 593 1.67e-106 329
Msa0170010 MtrunA17_Chr7g0217461 37.267 483 285 7 3 473 111 587 3.76e-106 328
Msa0170010 MtrunA17_Chr4g0054891 37.093 461 271 5 3 453 197 648 9.06e-106 329
Msa0170010 MtrunA17_Chr3g0142101 38.274 452 260 8 3 449 122 559 1.65e-104 323
Msa0170010 MtrunA17_Chr3g0133341 36.943 471 281 5 3 465 101 563 2.64e-104 322
Msa0170010 MtrunA17_Chr5g0399071 39.394 462 269 5 3 456 112 570 3.19e-104 323
Msa0170010 MtrunA17_Chr4g0014791 38.411 453 251 8 8 456 121 549 4.07e-104 322
Msa0170010 MtrunA17_Chr4g0014861 38.353 425 249 5 36 456 13 428 2.17e-103 315
Msa0170010 MtrunA17_Chr7g0255611 35.892 482 281 11 3 465 116 588 5.45e-102 317
Msa0170010 MtrunA17_Chr2g0284701 35.639 477 281 8 3 458 119 590 6.57e-102 317
Msa0170010 MtrunA17_Chr4g0014781 36.761 457 263 7 8 460 121 555 1.46e-101 315
Msa0170010 MtrunA17_Chr7g0255621 36.752 468 273 9 3 456 107 565 1.60e-101 316
Msa0170010 MtrunA17_Chr5g0415791 37.166 487 292 6 3 478 116 599 3.59e-101 315
Msa0170010 MtrunA17_Chr4g0063591 38.829 461 259 5 3 453 109 556 7.91e-101 313
Msa0170010 MtrunA17_Chr3g0082631 38.105 475 248 8 1 456 12 459 9.03e-101 310
Msa0170010 MtrunA17_Chr4g0014801 37.011 435 258 6 25 455 128 550 1.39e-100 312
Msa0170010 MtrunA17_Chr4g0014871 36.522 460 267 7 1 456 115 553 2.75e-100 311
Msa0170010 MtrunA17_Chr7g0255601 37.155 471 267 10 3 456 114 572 3.43e-100 313
Msa0170010 MtrunA17_Chr5g0439381 36.420 486 271 8 3 471 115 579 1.75e-99 310
Msa0170010 MtrunA17_Chr4g0014841 37.097 434 255 6 26 455 129 548 6.91e-99 308
Msa0170010 MtrunA17_Chr8g0353031 39.318 440 247 6 39 462 121 556 2.39e-98 307
Msa0170010 MtrunA17_Chr4g0011471 35.914 465 273 6 3 453 103 556 9.39e-94 295
Msa0170010 MtrunA17_Chr7g0214731 33.939 495 300 9 1 481 146 627 5.54e-92 292
Msa0170010 MtrunA17_Chr2g0276751 37.179 468 263 9 1 460 123 567 1.92e-90 287
Msa0170010 MtrunA17_Chr4g0069581 35.391 486 289 9 3 481 73 540 3.28e-90 286
Msa0170010 MtrunA17_Chr8g0362711 34.322 472 283 8 3 457 111 572 7.70e-90 285
Msa0170010 MtrunA17_Chr8g0362801 33.689 469 295 7 4 460 1 465 8.55e-89 279
Msa0170010 MtrunA17_Chr7g0271221 34.034 476 294 7 5 472 99 562 2.86e-86 276
Msa0170010 MtrunA17_Chr1g0193391 33.115 459 284 8 6 458 107 548 3.76e-85 274
Msa0170010 MtrunA17_Chr4g0059981 34.382 477 295 7 3 465 118 590 6.20e-84 270
Msa0170010 MtrunA17_Chr4g0011041 32.548 467 288 7 3 453 123 578 2.97e-83 268
Msa0170010 MtrunA17_Chr4g0060001 36.245 458 267 8 3 446 116 562 4.81e-83 268
Msa0170010 MtrunA17_Chr8g0379971 34.959 492 279 11 3 458 107 593 6.68e-83 268
Msa0170010 MtrunA17_Chr4g0059991 33.333 474 299 7 3 462 109 579 1.11e-82 267
Msa0170010 MtrunA17_Chr5g0415961 31.064 470 304 6 3 458 111 574 2.96e-82 265
Msa0170010 MtrunA17_Chr4g0059971 33.333 471 290 8 3 456 121 584 1.04e-81 264
Msa0170010 MtrunA17_Chr7g0235521 33.194 479 294 7 4 462 1 473 4.34e-81 259
Msa0170010 MtrunA17_Chr7g0261721 58.500 200 83 0 260 459 5 204 9.96e-80 248
Msa0170010 MtrunA17_Chr7g0240181 32.985 479 295 7 4 462 1 473 1.86e-79 255
Msa0170010 MtrunA17_Chr7g0240211 32.985 479 295 7 4 462 1 473 2.07e-79 255
Msa0170010 MtrunA17_Chr7g0240271 32.245 490 308 7 3 480 111 588 2.35e-79 258
Msa0170010 MtrunA17_Chr8g0390331 31.749 463 293 7 3 453 102 553 2.69e-79 258
Msa0170010 MtrunA17_Chr7g0240131 32.777 479 296 7 4 462 1 473 2.94e-79 254
Msa0170010 MtrunA17_Chr8g0379991 33.069 505 284 11 3 458 67 566 5.47e-78 254
Msa0170010 MtrunA17_Chr6g0451841 33.410 434 249 11 50 462 127 541 5.66e-78 253
Msa0170010 MtrunA17_Chr7g0240151 32.150 479 281 8 4 462 1 455 2.45e-74 241
Msa0170010 MtrunA17_Chr1g0157601 32.265 468 284 10 3 453 102 553 7.85e-74 243
Msa0170010 MtrunA17_Chr2g0331511 32.323 495 303 13 3 477 108 590 8.28e-74 244
Msa0170010 MtrunA17_Chr2g0331471 31.515 495 310 11 3 480 175 657 4.62e-73 244
Msa0170010 MtrunA17_Chr8g0362781 31.078 473 301 7 3 457 117 582 4.00e-72 239
Msa0170010 MtrunA17_Chr1g0147631 31.330 466 292 10 3 453 112 564 5.56e-72 239
Msa0170010 MtrunA17_Chr7g0240281 32.759 464 296 5 3 454 111 570 1.00e-70 235
Msa0170010 MtrunA17_Chr2g0331521 29.032 465 306 9 3 453 109 563 1.73e-70 234
Msa0170010 MtrunA17_Chr5g0415841 30.851 470 303 8 4 459 1 462 8.90e-70 229
Msa0170010 MtrunA17_Chr2g0331481 31.855 496 307 13 3 480 112 594 1.59e-69 233
Msa0170010 MtrunA17_Chr4g0003761 31.393 481 306 10 3 470 117 586 3.30e-69 231
Msa0170010 MtrunA17_Chr1g0157621 32.604 457 275 12 9 447 73 514 6.66e-69 230
Msa0170010 MtrunA17_Chr3g0112631 37.584 298 171 6 193 482 3 293 1.56e-66 216
Msa0170010 MtrunA17_Chr2g0326211 27.706 462 288 9 12 456 115 547 3.03e-63 214
Msa0170010 MtrunA17_Chr1g0157611 30.501 459 286 11 12 453 112 554 3.86e-63 214
Msa0170010 MtrunA17_Chr2g0331461 30.101 495 318 10 3 481 112 594 2.27e-62 214
Msa0170010 MtrunA17_Chr7g0234381 31.878 458 270 8 1 458 1 416 4.09e-61 205
Msa0170010 MtrunA17_Chr7g0234151 32.314 458 268 8 1 458 1 416 2.57e-60 203
Msa0170010 MtrunA17_Chr2g0325961 28.009 457 288 9 15 456 118 548 5.30e-60 206
Msa0170010 MtrunA17_Chr1g0177611 29.330 433 277 8 33 453 20 435 1.17e-58 199
Msa0170010 MtrunA17_Chr2g0325951 29.310 464 296 8 3 456 106 547 2.19e-58 201
Msa0170010 MtrunA17_Chr1g0177591 28.942 463 290 10 3 453 129 564 5.58e-58 201
Msa0170010 MtrunA17_Chr7g0261831 59.615 156 59 3 146 299 1 154 7.42e-58 190
Msa0170010 MtrunA17_Chr7g0234181 31.938 454 265 8 6 458 1 411 2.37e-57 195
Msa0170010 MtrunA17_Chr1g0177631 30.275 436 269 11 33 453 20 435 1.18e-55 192
Msa0170010 MtrunA17_Chr4g0060071 33.333 297 195 2 162 457 5 299 1.57e-55 187
Msa0170010 MtrunA17_Chr3g0142121 36.923 260 151 5 194 449 11 261 5.05e-52 177
Msa0170010 MtrunA17_Chr3g0142111 40.704 199 112 3 3 200 133 326 3.30e-44 158
Msa0170010 MtrunA17_Chr3g0112651 39.548 177 102 1 2 178 20 191 1.63e-43 152
Msa0170010 MtrunA17_Chr1g0147591 32.995 197 106 5 47 228 10 195 4.74e-27 107
Msa0170010 MtrunA17_Chr4g0060061 40.496 121 72 0 29 149 8 128 1.23e-24 99.0
Msa0170010 MtrunA17_Chr7g0261821 56.716 67 29 0 394 460 1 67 1.77e-22 90.9
Msa0170010 MtrunA17_Chr2g0326221 26.577 222 133 4 236 456 31 223 1.07e-17 82.0
Msa0170010 MtrunA17_Chr7g0261841 55.556 54 23 1 4 56 1 54 4.01e-13 65.1
Msa0170010 MtrunA17_Chr8g0382601 38.356 73 44 1 99 170 1 73 5.59e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170010 AT5G46050.1 70.105 475 137 4 2 474 111 582 0.0 678
Msa0170010 AT5G46050.2 70.190 473 136 4 4 474 1 470 0.0 676
Msa0170010 AT5G46040.1 65.625 480 157 5 3 480 112 585 0.0 621
Msa0170010 AT2G40460.1 51.092 458 213 6 3 458 109 557 3.85e-159 464
Msa0170010 AT3G54140.1 43.803 468 248 6 1 460 107 567 2.15e-135 402
Msa0170010 AT3G54140.2 43.803 468 248 6 1 460 107 567 2.15e-135 402
Msa0170010 AT2G02040.1 43.545 457 245 5 3 451 126 577 1.07e-134 401
Msa0170010 AT1G62200.1 43.077 455 242 4 3 450 137 581 9.39e-133 397
Msa0170010 AT5G01180.2 43.590 468 240 6 1 456 108 563 6.59e-131 391
Msa0170010 AT5G01180.3 43.590 468 240 6 1 456 108 563 6.59e-131 391
Msa0170010 AT5G01180.1 43.590 468 240 6 1 456 108 563 6.59e-131 391
Msa0170010 AT1G62200.2 40.871 482 243 5 3 450 137 610 8.83e-128 385
Msa0170010 AT1G62200.3 40.871 482 243 5 3 450 151 624 1.20e-127 385
Msa0170010 AT3G54450.1 40.798 451 249 7 32 469 109 554 3.99e-120 363
Msa0170010 AT3G53960.1 40.586 478 261 7 1 468 120 584 3.10e-119 362
Msa0170010 AT2G02020.1 40.889 450 224 6 3 448 127 538 7.53e-116 352
Msa0170010 AT2G37900.2 37.284 464 267 5 1 457 42 488 5.44e-110 335
Msa0170010 AT2G37900.1 37.284 464 267 5 1 457 121 567 3.46e-109 335
Msa0170010 AT1G32450.1 38.085 449 265 5 16 453 135 581 2.30e-108 335
Msa0170010 AT1G12110.1 40.546 476 263 8 3 464 112 581 6.88e-107 330
Msa0170010 AT1G68570.2 38.211 492 289 6 3 483 78 565 8.08e-107 329
Msa0170010 AT1G68570.1 38.211 492 289 6 3 483 108 595 1.76e-106 329
Msa0170010 AT2G26690.3 39.535 473 259 6 3 464 64 520 4.24e-106 326
Msa0170010 AT2G26690.2 39.535 473 259 6 3 464 76 532 6.65e-106 326
Msa0170010 AT2G26690.1 39.535 473 259 6 3 464 109 565 1.02e-105 327
Msa0170010 AT1G22540.1 37.821 468 258 10 3 464 115 555 4.04e-101 314
Msa0170010 AT3G21670.1 38.166 469 257 5 3 459 114 561 6.20e-99 309
Msa0170010 AT1G72140.1 37.367 471 247 9 1 457 117 553 3.84e-98 306
Msa0170010 AT2G02020.2 37.556 450 218 7 3 448 127 517 6.86e-98 305
Msa0170010 AT1G22550.1 38.785 428 233 9 39 456 151 559 8.54e-98 306
Msa0170010 AT1G22570.2 38.732 426 240 7 39 456 111 523 3.96e-95 298
Msa0170010 AT1G22570.1 38.732 426 240 7 39 456 148 560 1.11e-94 298
Msa0170010 AT4G21680.1 35.805 472 283 6 3 460 113 578 3.29e-94 297
Msa0170010 AT5G19640.1 36.461 469 269 10 3 463 144 591 1.02e-93 296
Msa0170010 AT1G69870.1 36.559 465 278 6 3 456 136 594 1.26e-93 296
Msa0170010 AT5G13400.1 36.596 470 285 7 3 461 149 616 5.47e-93 295
Msa0170010 AT1G59740.1 36.134 476 287 7 1 469 124 589 3.77e-92 292
Msa0170010 AT1G27040.3 33.775 453 296 2 3 455 80 528 7.46e-92 289
Msa0170010 AT1G27040.2 33.775 453 296 2 3 455 108 556 9.89e-92 290
Msa0170010 AT1G27040.1 33.775 453 296 2 3 455 112 560 1.22e-91 290
Msa0170010 AT1G72130.2 35.092 436 248 7 28 455 6 414 2.36e-91 285
Msa0170010 AT1G72130.3 35.092 436 248 7 28 455 6 414 2.36e-91 285
Msa0170010 AT1G72130.1 34.273 461 257 9 3 455 110 532 3.51e-90 285
Msa0170010 AT1G69850.1 33.333 483 292 7 3 462 110 585 2.17e-89 285
Msa0170010 AT1G33440.1 36.585 492 273 12 1 472 121 593 2.53e-89 285
Msa0170010 AT1G72125.1 37.002 427 250 6 38 456 141 556 3.63e-87 278
Msa0170010 AT1G72120.1 37.500 424 246 6 39 456 142 552 2.81e-86 276
Msa0170010 AT1G18880.1 33.472 481 293 9 3 465 104 575 4.82e-82 265
Msa0170010 AT3G16180.1 32.265 468 290 8 3 453 108 565 1.40e-81 264
Msa0170010 AT1G52190.1 32.340 470 290 10 3 453 106 566 9.43e-81 263
Msa0170010 AT3G45650.1 33.262 469 294 7 1 468 105 555 3.31e-80 259
Msa0170010 AT5G62680.1 32.716 486 300 8 3 469 128 605 6.88e-78 255
Msa0170010 AT1G27080.2 33.906 466 282 8 3 457 57 507 1.11e-76 250
Msa0170010 AT1G27080.1 33.906 466 282 8 3 457 99 549 2.33e-76 250
Msa0170010 AT5G14940.1 32.080 452 274 10 34 464 110 549 2.65e-75 247
Msa0170010 AT3G47960.1 33.966 474 284 11 3 457 146 609 3.87e-75 248
Msa0170010 AT3G45720.1 32.909 471 277 11 3 462 104 546 4.61e-75 246
Msa0170010 AT3G45650.2 31.515 495 294 8 1 468 105 581 9.85e-75 246
Msa0170010 AT3G45700.1 32.043 465 286 9 1 461 99 537 2.56e-74 244
Msa0170010 AT3G45710.1 31.601 481 294 10 1 471 104 559 7.54e-74 243
Msa0170010 AT3G45680.1 31.957 460 285 10 3 456 105 542 2.16e-71 236
Msa0170010 AT3G45660.1 30.921 456 294 8 3 456 106 542 4.10e-71 236
Msa0170010 AT3G45660.3 30.921 456 294 8 3 456 106 542 4.10e-71 236
Msa0170010 AT3G45660.2 30.921 456 294 8 3 456 127 563 6.95e-71 236
Msa0170010 AT5G28470.2 31.838 468 288 10 3 456 102 552 4.62e-70 233
Msa0170010 AT5G62730.2 31.002 429 277 4 43 458 106 528 1.86e-68 228
Msa0170010 AT5G62730.1 31.002 429 277 4 43 458 165 587 5.84e-68 228
Msa0170010 AT5G28470.1 31.624 468 287 11 3 456 102 550 4.06e-67 225
Msa0170010 AT3G25260.1 33.111 450 253 11 3 447 106 512 9.40e-67 223
Msa0170010 AT3G01350.1 30.512 449 275 9 41 461 117 556 1.17e-64 219
Msa0170010 AT3G25280.1 31.718 454 273 9 1 453 104 521 8.43e-63 213
Msa0170010 AT1G69860.1 32.112 464 288 9 3 456 103 549 2.86e-61 210
Msa0170010 AT3G45690.1 29.847 459 255 13 3 456 103 499 4.18e-58 200
Msa0170010 AT5G11570.1 27.549 461 246 12 1 453 96 476 3.36e-50 178
Msa0170010 AT2G38100.2 26.846 447 288 10 36 469 76 496 5.97e-39 148
Msa0170010 AT2G38100.1 26.846 447 288 10 36 469 92 512 1.25e-38 147
Msa0170010 AT2G38100.3 26.846 447 288 10 36 469 98 518 1.57e-38 147

Find 128 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATACTCTTCATGCTTTC+TGG 0.066053 1_4:+53571873 None:intergenic
GCTTCCTCAGTTTATACTTA+TGG 0.141612 1_4:-53571952 Msa0170010:CDS
AATTAATTATATTGTTATTT+AGG 0.191032 1_4:-53576075 Msa0170010:five_prime_UTR
GTTAAGGATGATTCCAATAT+TGG 0.212614 1_4:-53572336 Msa0170010:CDS
ATGGCATTGTGGTGGCTTTA+AGG 0.213261 1_4:+53573524 None:intergenic
GGTAATCCCTCTTGGATTCT+TGG 0.231736 1_4:+53572121 None:intergenic
TTGTTCCTTGTTTAACAAAA+AGG 0.237451 1_4:+53572270 None:intergenic
AGGCAATTTGTGTCTATAAA+AGG 0.238778 1_4:+53573176 None:intergenic
TAGTTGCTTCTTTGAGAAAA+TGG 0.249907 1_4:-53573119 Msa0170010:CDS
TTGCAGCATGCTCAATGTTT+TGG 0.251636 1_4:-53576148 Msa0170010:five_prime_UTR
CTTCCTCAGTTTATACTTAT+GGG 0.256695 1_4:-53571951 Msa0170010:CDS
CATCTGTGACAGAAAATTAT+AGG 0.263662 1_4:-53572043 Msa0170010:CDS
TGTTCTTCACACAATTATTA+TGG 0.272669 1_4:-53572072 Msa0170010:CDS
CTAGAACAGTATTAGCAAAA+AGG 0.279901 1_4:+53573292 None:intergenic
TTACAAGGCTTTATGTATAT+AGG 0.285350 1_4:-53571656 Msa0170010:CDS
TGGATGTTTAGCATCTTCTT+TGG 0.287426 1_4:-53573318 Msa0170010:CDS
AATATCAATTATGATATTCT+TGG 0.288500 1_4:-53573208 Msa0170010:CDS
ACAAATGTAGCAACCAATAT+TGG 0.292977 1_4:+53572323 None:intergenic
AAAAGATGGATAATACTAAT+AGG 0.304893 1_4:-53576110 Msa0170010:five_prime_UTR
ATGCAATAACTTATTCTATA+AGG 0.305469 1_4:+53571562 None:intergenic
TCCTGTGAGGCTAGTGGGTT+GGG 0.316028 1_4:-53576256 Msa0170010:five_prime_UTR
TACAAGGCTTTATGTATATA+GGG 0.319432 1_4:-53571655 Msa0170010:CDS
TAGGGTGAAAATCATCAAAT+TGG 0.324030 1_4:+53573376 None:intergenic
AGAACTATATGAACTTGATA+TGG 0.329187 1_4:-53573070 Msa0170010:CDS
ACTAAGGAACATGGTCATAA+AGG 0.332144 1_4:-53571774 Msa0170010:CDS
GTCTCTGCTTTATAGTTTGT+AGG 0.334105 1_4:+53575996 None:intergenic
GATAATGTTGGTTGGACTCT+TGG 0.338277 1_4:-53573258 Msa0170010:CDS
GGATGTTTAGCATCTTCTTT+GGG 0.346262 1_4:-53573317 Msa0170010:CDS
TGTATATAGGGCTGAAGTTT+CGG 0.360555 1_4:-53571643 Msa0170010:CDS
ATGAATAGAATGAGCTCAAA+AGG 0.367880 1_4:+53571367 None:intergenic
AAAGTCAATCCTGCTATAAC+TGG 0.384241 1_4:-53576050 Msa0170010:five_prime_UTR
TCTATGACCGTTTCTTTGTA+AGG 0.389056 1_4:-53572160 Msa0170010:CDS
CTCCTGTGAGGCTAGTGGGT+TGG 0.392286 1_4:-53576257 Msa0170010:five_prime_UTR
GACTGGACCAAGGGTTCTTA+AGG 0.396237 1_4:-53576386 Msa0170010:five_prime_UTR
CTTCTTCAAAGAATGGGAAT+TGG 0.397785 1_4:-53572098 Msa0170010:CDS
ATAAGTTATTGCATCTATAT+AGG 0.409064 1_4:-53571553 Msa0170010:exon
TTTAATTGTTTGATCTATGT+TGG 0.409105 1_4:-53573593 Msa0170010:five_prime_UTR
TCATATTCTTCGACTACATT+AGG 0.409286 1_4:-53571846 Msa0170010:CDS
ACTTGAGCCATCATTGTACT+TGG 0.409568 1_4:+53572299 None:intergenic
TATAGTTCTTTAGTATCATC+AGG 0.412300 1_4:+53573084 None:intergenic
AAAGATGGATAATACTAATA+GGG 0.412441 1_4:-53576109 Msa0170010:five_prime_UTR
CAATTCCCATTCTTTGAAGA+AGG 0.415294 1_4:+53572099 None:intergenic
GCACCAATGGTTGATATGTT+GGG 0.427910 1_4:+53573402 None:intergenic
CTAAGGAACATGGTCATAAA+GGG 0.428252 1_4:-53571773 Msa0170010:CDS
AGCACCAATGGTTGATATGT+TGG 0.430741 1_4:+53573401 None:intergenic
TGAAGAAGGGTAATCCCTCT+TGG 0.431813 1_4:+53572113 None:intergenic
GAACATGGTTTAGTTGAAAG+TGG 0.432350 1_4:-53572005 Msa0170010:CDS
GATTACCCTTCTTCAAAGAA+TGG 0.435756 1_4:-53572105 Msa0170010:CDS
GCACTTTACACTCTAGCAAT+AGG 0.438872 1_4:-53573441 Msa0170010:CDS
ATATATACATATAACAACTT+TGG 0.440781 1_4:+53571506 None:intergenic
TCTCTGCTTTATAGTTTGTA+GGG 0.449613 1_4:+53575997 None:intergenic
ATGGAAGAGTATGCTAAGAA+AGG 0.449915 1_4:-53573051 Msa0170010:CDS
ATTACCCTTCTTCAAAGAAT+GGG 0.450564 1_4:-53572104 Msa0170010:CDS
ATCGCGACACTGTCGACAAA+AGG 0.462571 1_4:+53571799 None:intergenic
AAGAGACAAAACAAATGTTA+AGG 0.463617 1_4:-53572352 Msa0170010:CDS
TAACATTCAATCTCAAGATA+AGG 0.464695 1_4:-53576288 Msa0170010:five_prime_UTR
TGGAAGAGTATGCTAAGAAA+GGG 0.468058 1_4:-53573050 Msa0170010:CDS
TACACTCTAGCAATAGGAAC+AGG 0.472265 1_4:-53573435 Msa0170010:CDS
TCTTTAGTATCATCAGGAAC+AGG 0.472294 1_4:+53573090 None:intergenic
GGCAATTTGTGTCTATAAAA+GGG 0.473662 1_4:+53573177 None:intergenic
CCAGAAAGCATGAAGAGTAT+TGG 0.475085 1_4:-53571873 Msa0170010:CDS
GACAGTGTCGCGATTAACTA+AGG 0.475675 1_4:-53571790 Msa0170010:CDS
GACAAGGCAAGTGTCAAAAC+AGG 0.476830 1_4:-53572416 Msa0170010:CDS
ATCAAATTGGTCAGCACCAA+TGG 0.477753 1_4:+53573389 None:intergenic
ATTTGTTCCAAGTACAATGA+TGG 0.478629 1_4:-53572306 Msa0170010:CDS
TCATATTAAAGATTCGATAG+TGG 0.482661 1_4:-53576408 Msa0170010:five_prime_UTR
TCTTCGACTACATTAGGCAT+TGG 0.484306 1_4:-53571840 Msa0170010:CDS
TCTTCTTCGCGATTGTTACA+AGG 0.486697 1_4:-53571671 Msa0170010:CDS
GAGTCCAACCAACATTATCT+TGG 0.490599 1_4:+53573262 None:intergenic
TGTTGGACCTTAAGAACCCT+TGG 0.492753 1_4:+53576379 None:intergenic
ACAAATGCAGCTAAACTTGC+CGG 0.493144 1_4:+53572212 None:intergenic
TATAGACACAAATTGCCTGC+AGG 0.499408 1_4:-53573171 Msa0170010:CDS
GCATAATCCTTACAAAGAAA+CGG 0.503299 1_4:+53572153 None:intergenic
GGATATGCTTTACCAACTCT+AGG 0.512162 1_4:-53573237 Msa0170010:CDS
TCAATTATGATATTCTTGGC+AGG 0.514039 1_4:-53573204 Msa0170010:CDS
TACTTTCACTAGAATGGCTA+GGG 0.514636 1_4:-53573145 Msa0170010:CDS
GATATTGCTAATCCTAGAGT+TGG 0.517407 1_4:+53573225 None:intergenic
ATAGTTAAACCAGTTATAGC+AGG 0.517679 1_4:+53576041 None:intergenic
AGGGAGTACTTTCACTAGAA+TGG 0.522005 1_4:-53573151 Msa0170010:CDS
TCCCAACCCACTAGCCTCAC+AGG 0.523338 1_4:+53576255 None:intergenic
TGATCTATGTTGGAACATGC+AGG 0.525135 1_4:-53573583 Msa0170010:exon
GTACTTTCACTAGAATGGCT+AGG 0.525257 1_4:-53573146 Msa0170010:CDS
AATTCCCATTCTTTGAAGAA+GGG 0.526526 1_4:+53572100 None:intergenic
TGGTGCTCCTGTGAGGCTAG+TGG 0.530279 1_4:-53576262 Msa0170010:five_prime_UTR
GGTGCTCCTGTGAGGCTAGT+GGG 0.532930 1_4:-53576261 Msa0170010:five_prime_UTR
CTTAGAGTGGCAAAAGAACA+TGG 0.538649 1_4:-53572020 Msa0170010:CDS
CATTGTGGTGGCTTTAAGGT+AGG 0.540910 1_4:+53573528 None:intergenic
TTGATTCCACTCCAACATTG+AGG 0.553607 1_4:-53573011 Msa0170010:intron
CACAGCTAATTGTAATGTAG+AGG 0.555926 1_4:+53573473 None:intergenic
GTTTATATCCAAGATAATGT+TGG 0.556894 1_4:-53573270 Msa0170010:CDS
TAGAAGAATCTTATAGCTAA+CGG 0.559085 1_4:-53576193 Msa0170010:five_prime_UTR
CTTATTCTATAAGGTTCGCA+TGG 0.561389 1_4:+53571571 None:intergenic
ACTTGAAAATTTGCTGCATG+TGG 0.561436 1_4:+53576333 None:intergenic
ATATCCAAGATAATGTTGGT+TGG 0.562801 1_4:-53573266 Msa0170010:CDS
ATAGACACAAATTGCCTGCA+GGG 0.564786 1_4:-53573170 Msa0170010:CDS
CTAGTGAAAGTACTCCCTGC+AGG 0.565881 1_4:+53573156 None:intergenic
AAATATATATACCTCAATGT+TGG 0.566219 1_4:+53573000 None:intergenic
AAACCCAACATATCAACCAT+TGG 0.569968 1_4:-53573405 Msa0170010:CDS
ACAACACTTGACAGACACAT+TGG 0.573195 1_4:-53572251 Msa0170010:CDS
TGAATAGAATGAGCTCAAAA+GGG 0.577618 1_4:+53571368 None:intergenic
TGGAAGCTTCAAAATTCCAC+CGG 0.581545 1_4:-53572231 Msa0170010:CDS
AAACAGGCTCAACTAGTCCA+TGG 0.584333 1_4:-53572400 Msa0170010:CDS
AGCAAAATGAAAATACTCAA+AGG 0.587653 1_4:+53571972 None:intergenic
CATGCTTGCCAATGAACTGA+AGG 0.590151 1_4:-53571610 Msa0170010:CDS
TTCGATAGTGGACTGGACCA+AGG 0.592734 1_4:-53576396 Msa0170010:five_prime_UTR
TTAAAGATTCGATAGTGGAC+TGG 0.592983 1_4:-53576403 Msa0170010:five_prime_UTR
ATTATTTAGGTTCCTAGACA+AGG 0.594422 1_4:-53572432 Msa0170010:intron
GATCTATGTTGGAACATGCA+GGG 0.606754 1_4:-53573582 Msa0170010:exon
TCGATAGTGGACTGGACCAA+GGG 0.608087 1_4:-53576395 Msa0170010:five_prime_UTR
GTAACTGTGCATAACATCCA+TGG 0.611443 1_4:+53572383 None:intergenic
AGGAACATGGTCATAAAGGG+TGG 0.616187 1_4:-53571770 Msa0170010:CDS
CTTGAAAATTTGCTGCATGT+GGG 0.617399 1_4:+53576334 None:intergenic
TATATACCTCAATGTTGGAG+TGG 0.619929 1_4:+53573005 None:intergenic
TCTAATTCATGGCATTGTGG+TGG 0.621164 1_4:+53573516 None:intergenic
ACTCTAGCAATAGGAACAGG+TGG 0.624774 1_4:-53573432 Msa0170010:CDS
AGAAAATTATAGGCTTAGAG+TGG 0.632729 1_4:-53572033 Msa0170010:CDS
ACATCTAATTCATGGCATTG+TGG 0.635027 1_4:+53573513 None:intergenic
CATGGTTTAGTTGAAAGTGG+AGG 0.662978 1_4:-53572002 Msa0170010:CDS
GAGCACTACACAAACAAGCA+AGG 0.664656 1_4:+53572181 None:intergenic
TGAACTGAAGGAAAAGAAAG+CGG 0.669979 1_4:-53571598 Msa0170010:CDS
AAGGACATGGTGCTCCTGTG+AGG 0.673969 1_4:-53576269 Msa0170010:five_prime_UTR
AATGCAGCTAAACTTGCCGG+TGG 0.674199 1_4:+53572215 None:intergenic
TCGCGATTAACTAAGGAACA+TGG 0.676462 1_4:-53571783 Msa0170010:CDS
GATTAACCAAGAATCCAAGA+GGG 0.678167 1_4:-53572127 Msa0170010:CDS
AGATTAACCAAGAATCCAAG+AGG 0.693948 1_4:-53572128 Msa0170010:CDS
TCAATCTCAAGATAAGGACA+TGG 0.696523 1_4:-53576282 Msa0170010:five_prime_UTR
GTTCCCATAAGTATAAACTG+AGG 0.698344 1_4:+53571948 None:intergenic
AAGAATCTTATAGCTAACGG+TGG 0.704740 1_4:-53576190 Msa0170010:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATATATATATATATAT+GGG + chr1_4:53572293-53572312 None:intergenic 0.0%
!! AAAATATATATATATATATA+TGG + chr1_4:53572294-53572313 None:intergenic 0.0%
!!! ATTTTATATTGTTAATAAAG+TGG + chr1_4:53571994-53572013 None:intergenic 10.0%
!! TTAATATATAAACCAAAAAA+AGG - chr1_4:53572344-53572363 Msa0170010:CDS 10.0%
!!! TAATTTTCTCAAATTATTTT+TGG - chr1_4:53574837-53574856 Msa0170010:intron 10.0%
!! ATTCAAAAATAATAACAATA+TGG + chr1_4:53576229-53576248 None:intergenic 10.0%
!!! TTTTTTTTGAAAAGAAACTA+TGG + chr1_4:53573323-53573342 None:intergenic 15.0%
!!! ATAAACTTTCATTTTTCAAT+TGG - chr1_4:53574351-53574370 Msa0170010:intron 15.0%
!! AATATCAATTATGATATTCT+TGG - chr1_4:53574484-53574503 Msa0170010:intron 15.0%
!!! ACTTTCACTATAATTTTTTA+CGG + chr1_4:53575152-53575171 None:intergenic 15.0%
!! ATATATACATATAACAACTT+TGG + chr1_4:53576189-53576208 None:intergenic 15.0%
!!! TAAGTTTTAAGTGAAAAAGA+TGG - chr1_4:53571568-53571587 Msa0170010:exon 20.0%
!! AAAAGATGGATAATACTAAT+AGG - chr1_4:53571582-53571601 Msa0170010:CDS 20.0%
!! AAAGATGGATAATACTAATA+GGG - chr1_4:53571583-53571602 Msa0170010:CDS 20.0%
!! TTAATTAAGTTCGACTTATT+TGG + chr1_4:53571825-53571844 None:intergenic 20.0%
!!! ATTGCAAGCTTTATTTTTTT+TGG + chr1_4:53572078-53572097 None:intergenic 20.0%
!! TAAAAATCACTCAAGTAAAT+TGG + chr1_4:53572237-53572256 None:intergenic 20.0%
!! TTAATGTCTTTAACATCATT+TGG + chr1_4:53573116-53573135 None:intergenic 20.0%
!! AAAGAAACTATGGTTTATAT+GGG + chr1_4:53573313-53573332 None:intergenic 20.0%
!! AAAAGAAACTATGGTTTATA+TGG + chr1_4:53573314-53573333 None:intergenic 20.0%
!!! AGAAATTGATTGTAACTTTT+TGG - chr1_4:53573975-53573994 Msa0170010:intron 20.0%
!! TTTAATTGTTTGATCTATGT+TGG - chr1_4:53574099-53574118 Msa0170010:intron 20.0%
!!! ATTTTGTTACATCTAATTCA+TGG + chr1_4:53574190-53574209 None:intergenic 20.0%
!!! GTTTATGTGATTTTTCTTTA+GGG + chr1_4:53574337-53574356 None:intergenic 20.0%
!!! AGTTTATGTGATTTTTCTTT+AGG + chr1_4:53574338-53574357 None:intergenic 20.0%
!! AAATATATATACCTCAATGT+TGG + chr1_4:53574695-53574714 None:intergenic 20.0%
!! TTGAATATAATAACATGTGT+CGG + chr1_4:53574812-53574831 None:intergenic 20.0%
!!! CTTTCACTATAATTTTTTAC+GGG + chr1_4:53575151-53575170 None:intergenic 20.0%
!! ATGCAATAACTTATTCTATA+AGG + chr1_4:53576133-53576152 None:intergenic 20.0%
!! ATAAGTTATTGCATCTATAT+AGG - chr1_4:53576139-53576158 Msa0170010:five_prime_UTR 20.0%
!!! ATTTTTAGAATTCACATAGT+AGG - chr1_4:53576247-53576266 Msa0170010:five_prime_UTR 20.0%
!!! TTTTTACAAGAAGAATATCA+AGG - chr1_4:53576374-53576393 Msa0170010:five_prime_UTR 20.0%
! TCATATTAAAGATTCGATAG+TGG - chr1_4:53571284-53571303 Msa0170010:three_prime_UTR 25.0%
!! TGAATGTTAAGAACTTTTAG+TGG + chr1_4:53571393-53571412 None:intergenic 25.0%
! TAACATTCAATCTCAAGATA+AGG - chr1_4:53571404-53571423 Msa0170010:three_prime_UTR 25.0%
! TAGAAGAATCTTATAGCTAA+CGG - chr1_4:53571499-53571518 Msa0170010:three_prime_UTR 25.0%
!!! GAACTATTTTCGAGTTAATT+CGG + chr1_4:53571759-53571778 None:intergenic 25.0%
! AAATAGTTCGAAATTCGATT+CGG - chr1_4:53571770-53571789 Msa0170010:CDS 25.0%
!!! TGATTTTTAGACCAATTAAG+AGG - chr1_4:53572248-53572267 Msa0170010:CDS 25.0%
!!! CTTTTTTGTACTCCTTTTTT+TGG + chr1_4:53572359-53572378 None:intergenic 25.0%
!! AAAGGAGTACAAAAAAGAAA+AGG - chr1_4:53572362-53572381 Msa0170010:CDS 25.0%
!! AAGGAGTACAAAAAAGAAAA+GGG - chr1_4:53572363-53572382 Msa0170010:CDS 25.0%
!! TATACCAAAACCTTTTCAAA+AGG - chr1_4:53572390-53572409 Msa0170010:CDS 25.0%
!!! AGATTTAACACCTTTTGAAA+AGG + chr1_4:53572403-53572422 None:intergenic 25.0%
!!! AAAGGTGTTAAATCTGAAAT+TGG - chr1_4:53572408-53572427 Msa0170010:CDS 25.0%
!! AAGGTGTTAAATCTGAAATT+GGG - chr1_4:53572409-53572428 Msa0170010:CDS 25.0%
!! TGTCATCTTTTGAATTACTT+TGG + chr1_4:53572492-53572511 None:intergenic 25.0%
!! CAAATAACTTCTTTGATAGT+CGG - chr1_4:53572913-53572932 Msa0170010:intron 25.0%
! GTTAAAGACATTAATAATGC+AGG - chr1_4:53573122-53573141 Msa0170010:CDS 25.0%
! AGACCAATTTCTATCTAATA+AGG - chr1_4:53573170-53573189 Msa0170010:CDS 25.0%
!! TTTAAAGTTCACGAAAAGTT+CGG + chr1_4:53573546-53573565 None:intergenic 25.0%
! AAATCACATAATTCAGTGTA+GGG + chr1_4:53573681-53573700 None:intergenic 25.0%
! AAAATCACATAATTCAGTGT+AGG + chr1_4:53573682-53573701 None:intergenic 25.0%
! GAATGTGAGTAATTAATGTT+TGG + chr1_4:53573864-53573883 None:intergenic 25.0%
! GAATTGTCATGTAAATTATG+TGG - chr1_4:53574068-53574087 Msa0170010:intron 25.0%
!! TTACAATTAGCTGTGTTTTA+TGG - chr1_4:53574227-53574246 Msa0170010:intron 25.0%
!!! AACTTTCATTTTTCAATTGG+TGG - chr1_4:53574354-53574373 Msa0170010:intron 25.0%
! TAGAACAGTATTAGCAAAAA+GGG + chr1_4:53574402-53574421 None:intergenic 25.0%
! GTTTATATCCAAGATAATGT+TGG - chr1_4:53574422-53574441 Msa0170010:intron 25.0%
! TATAGTTCTTTAGTATCATC+AGG + chr1_4:53574611-53574630 None:intergenic 25.0%
! AGAACTATATGAACTTGATA+TGG - chr1_4:53574622-53574641 Msa0170010:intron 25.0%
! GATTAATTAATCGTAACACA+CGG - chr1_4:53574727-53574746 Msa0170010:intron 25.0%
!!! TGTAGTTTTACTTTGAGAAA+TGG - chr1_4:53574920-53574939 Msa0170010:intron 25.0%
!!! TTACTTTGAGAAATGGTTTT+TGG - chr1_4:53574927-53574946 Msa0170010:intron 25.0%
! GGTTAATCATGTTTAATAGA+TGG - chr1_4:53575012-53575031 Msa0170010:intron 25.0%
! AAGAGACAAAACAAATGTTA+AGG - chr1_4:53575340-53575359 Msa0170010:intron 25.0%
!! TGTTCCTTGTTTAACAAAAA+GGG + chr1_4:53575424-53575443 None:intergenic 25.0%
!! TTGTTCCTTGTTTAACAAAA+AGG + chr1_4:53575425-53575444 None:intergenic 25.0%
! TGTTCTTCACACAATTATTA+TGG - chr1_4:53575620-53575639 Msa0170010:intron 25.0%
! AGCAAAATGAAAATACTCAA+AGG + chr1_4:53575723-53575742 None:intergenic 25.0%
!! TTACAAGGCTTTATGTATAT+AGG - chr1_4:53576036-53576055 Msa0170010:five_prime_UTR 25.0%
!! TACAAGGCTTTATGTATATA+GGG - chr1_4:53576037-53576056 Msa0170010:five_prime_UTR 25.0%
ATAGTTAAACCAGTTATAGC+AGG + chr1_4:53571654-53571673 None:intergenic 30.0%
! TCTCTGCTTTATAGTTTGTA+GGG + chr1_4:53571698-53571717 None:intergenic 30.0%
GATTCTGTTATATACTCGAT+TGG + chr1_4:53572025-53572044 None:intergenic 30.0%
! GCTTAAATCTTTCAAGTGTA+TGG + chr1_4:53572047-53572066 None:intergenic 30.0%
!! ATCGAAAGTTTTGTGAAGAA+CGG - chr1_4:53572110-53572129 Msa0170010:CDS 30.0%
CAACTTGTCTATATAAAGAG+AGG - chr1_4:53572137-53572156 Msa0170010:CDS 30.0%
! AGGAGTACAAAAAAGAAAAG+GGG - chr1_4:53572364-53572383 Msa0170010:CDS 30.0%
!! AACACCTTTTGAAAAGGTTT+TGG + chr1_4:53572397-53572416 None:intergenic 30.0%
TTCTATCCCTGATTTCATTA+GGG + chr1_4:53572464-53572483 None:intergenic 30.0%
ATTCTATCCCTGATTTCATT+AGG + chr1_4:53572465-53572484 None:intergenic 30.0%
TAGTTAGACTTAGAGATATG+AGG + chr1_4:53572585-53572604 None:intergenic 30.0%
!! AATCTATTTCTGTGATACCT+TGG + chr1_4:53572636-53572655 None:intergenic 30.0%
ATTGAAATTGCTCATCTCAA+AGG + chr1_4:53572712-53572731 None:intergenic 30.0%
TGGATAAAAGTAAACACTGA+TGG + chr1_4:53572874-53572893 None:intergenic 30.0%
CGACTATCAAAGAAGTTATT+TGG + chr1_4:53572915-53572934 None:intergenic 30.0%
ACACTAAAAAATCTGCTAGA+GGG + chr1_4:53572999-53573018 None:intergenic 30.0%
AACACTAAAAAATCTGCTAG+AGG + chr1_4:53573000-53573019 None:intergenic 30.0%
GGTCCTTATTAGATAGAAAT+TGG + chr1_4:53573176-53573195 None:intergenic 30.0%
TGGATATGTTTAGCATAGAT+AGG - chr1_4:53573223-53573242 Msa0170010:CDS 30.0%
ACTCGAATTAAATGAACCAT+GGG + chr1_4:53573369-53573388 None:intergenic 30.0%
AACTCGAATTAAATGAACCA+TGG + chr1_4:53573370-53573389 None:intergenic 30.0%
TAAGCTATGAATCATGGATA+CGG + chr1_4:53573762-53573781 None:intergenic 30.0%
GACTTATAAGCTATGAATCA+TGG + chr1_4:53573768-53573787 None:intergenic 30.0%
TGATTCATAGCTTATAAGTC+AGG - chr1_4:53573768-53573787 Msa0170010:intron 30.0%
GATTCATAGCTTATAAGTCA+GGG - chr1_4:53573769-53573788 Msa0170010:intron 30.0%
TAGGGTGAAAATCATCAAAT+TGG + chr1_4:53574319-53574338 None:intergenic 30.0%
CTAGAACAGTATTAGCAAAA+AGG + chr1_4:53574403-53574422 None:intergenic 30.0%
ATATCCAAGATAATGTTGGT+TGG - chr1_4:53574426-53574445 Msa0170010:intron 30.0%
TCAATTATGATATTCTTGGC+AGG - chr1_4:53574488-53574507 Msa0170010:intron 30.0%
GGCAATTTGTGTCTATAAAA+GGG + chr1_4:53574518-53574537 None:intergenic 30.0%
AGGCAATTTGTGTCTATAAA+AGG + chr1_4:53574519-53574538 None:intergenic 30.0%
! TAGTTGCTTCTTTGAGAAAA+TGG - chr1_4:53574573-53574592 Msa0170010:intron 30.0%
! TTCCGCAACAACTTTTTAAA+GGG - chr1_4:53574969-53574988 Msa0170010:intron 30.0%
! AACCCTTTAAAAAGTTGTTG+CGG + chr1_4:53574974-53574993 None:intergenic 30.0%
AACTTCATTGACCACAAATT+TGG - chr1_4:53575077-53575096 Msa0170010:intron 30.0%
! ATTATTTAGGTTCCTAGACA+AGG - chr1_4:53575260-53575279 Msa0170010:intron 30.0%
GTTAAGGATGATTCCAATAT+TGG - chr1_4:53575356-53575375 Msa0170010:intron 30.0%
ACAAATGTAGCAACCAATAT+TGG + chr1_4:53575372-53575391 None:intergenic 30.0%
ATTTGTTCCAAGTACAATGA+TGG - chr1_4:53575386-53575405 Msa0170010:intron 30.0%
! AACACCCTTTTTGTTAAACA+AGG - chr1_4:53575417-53575436 Msa0170010:intron 30.0%
GCATAATCCTTACAAAGAAA+CGG + chr1_4:53575542-53575561 None:intergenic 30.0%
ATTACCCTTCTTCAAAGAAT+GGG - chr1_4:53575588-53575607 Msa0170010:intron 30.0%
! AATTCCCATTCTTTGAAGAA+GGG + chr1_4:53575595-53575614 None:intergenic 30.0%
CATCTGTGACAGAAAATTAT+AGG - chr1_4:53575649-53575668 Msa0170010:intron 30.0%
AGAAAATTATAGGCTTAGAG+TGG - chr1_4:53575659-53575678 Msa0170010:intron 30.0%
CTTCCTCAGTTTATACTTAT+GGG - chr1_4:53575741-53575760 Msa0170010:intron 30.0%
TCATATTCTTCGACTACATT+AGG - chr1_4:53575846-53575865 Msa0170010:intron 30.0%
! TTTCTTTTCCTTCAGTTCAT+TGG + chr1_4:53576093-53576112 None:intergenic 30.0%
TGAATAGAATGAGCTCAAAA+GGG + chr1_4:53576327-53576346 None:intergenic 30.0%
ATGAATAGAATGAGCTCAAA+AGG + chr1_4:53576328-53576347 None:intergenic 30.0%
!! TTAAAGATTCGATAGTGGAC+TGG - chr1_4:53571289-53571308 Msa0170010:three_prime_UTR 35.0%
! AACACTGCAAGACATTTTGT+TGG + chr1_4:53571333-53571352 None:intergenic 35.0%
!! CTTGAAAATTTGCTGCATGT+GGG + chr1_4:53571361-53571380 None:intergenic 35.0%
!! ACTTGAAAATTTGCTGCATG+TGG + chr1_4:53571362-53571381 None:intergenic 35.0%
TCAATCTCAAGATAAGGACA+TGG - chr1_4:53571410-53571429 Msa0170010:three_prime_UTR 35.0%
AAGAATCTTATAGCTAACGG+TGG - chr1_4:53571502-53571521 Msa0170010:three_prime_UTR 35.0%
AAAGTCAATCCTGCTATAAC+TGG - chr1_4:53571642-53571661 Msa0170010:CDS 35.0%
! GTCTCTGCTTTATAGTTTGT+AGG + chr1_4:53571699-53571718 None:intergenic 35.0%
GGAGTACAAAAAAGAAAAGG+GGG - chr1_4:53572365-53572384 Msa0170010:CDS 35.0%
GAGTACAATAGGAATAGGTT+GGG + chr1_4:53572439-53572458 None:intergenic 35.0%
AGAGTACAATAGGAATAGGT+TGG + chr1_4:53572440-53572459 None:intergenic 35.0%
TCTATCCCTGATTTCATTAG+GGG + chr1_4:53572463-53572482 None:intergenic 35.0%
AAGAAAGACCTAGATTTGCA+AGG - chr1_4:53572512-53572531 Msa0170010:intron 35.0%
GTGTCTCACATTTATAGAGA+AGG + chr1_4:53572556-53572575 None:intergenic 35.0%
CAGAAATAGATTTGAAAGCC+AGG - chr1_4:53572644-53572663 Msa0170010:intron 35.0%
TGATTCACAGTTAGTTATCC+TGG + chr1_4:53572665-53572684 None:intergenic 35.0%
AGCAATTTCAATTGCAGTCA+TGG - chr1_4:53572720-53572739 Msa0170010:intron 35.0%
! TCAGCATACAACGCATTTTT+AGG - chr1_4:53572754-53572773 Msa0170010:intron 35.0%
GGATGTTTCTCTCAATTCTT+AGG + chr1_4:53572781-53572800 None:intergenic 35.0%
! GGAATCTTTAGAAACGCATA+AGG + chr1_4:53572814-53572833 None:intergenic 35.0%
CACTAAAAAATCTGCTAGAG+GGG + chr1_4:53572998-53573017 None:intergenic 35.0%
CATAGTTGCTCAAACTTCTA+TGG + chr1_4:53573031-53573050 None:intergenic 35.0%
TCCAATGCAGAAACTTATCA+TGG - chr1_4:53573067-53573086 Msa0170010:CDS 35.0%
TCCATGATAAGTTTCTGCAT+TGG + chr1_4:53573071-53573090 None:intergenic 35.0%
ATGAACTGATGTGAATTGCA+TGG - chr1_4:53573203-53573222 Msa0170010:CDS 35.0%
!! CGACTCGATAATAATTTGCT+CGG + chr1_4:53573625-53573644 None:intergenic 35.0%
ATGAATCATGGATACGGATA+CGG + chr1_4:53573756-53573775 None:intergenic 35.0%
TGTTTGGATACATTCAAGTG+AGG + chr1_4:53573848-53573867 None:intergenic 35.0%
! ATACACACGTCACAACTTTT+TGG - chr1_4:53573949-53573968 Msa0170010:intron 35.0%
ACATCTAATTCATGGCATTG+TGG + chr1_4:53574182-53574201 None:intergenic 35.0%
CACAGCTAATTGTAATGTAG+AGG + chr1_4:53574222-53574241 None:intergenic 35.0%
AAACCCAACATATCAACCAT+TGG - chr1_4:53574287-53574306 Msa0170010:intron 35.0%
TGGATGTTTAGCATCTTCTT+TGG - chr1_4:53574374-53574393 Msa0170010:intron 35.0%
GGATGTTTAGCATCTTCTTT+GGG - chr1_4:53574375-53574394 Msa0170010:intron 35.0%
GATATTGCTAATCCTAGAGT+TGG + chr1_4:53574470-53574489 None:intergenic 35.0%
TACTTTCACTAGAATGGCTA+GGG - chr1_4:53574547-53574566 Msa0170010:intron 35.0%
TCTTTAGTATCATCAGGAAC+AGG + chr1_4:53574605-53574624 None:intergenic 35.0%
! ATGGAAGAGTATGCTAAGAA+AGG - chr1_4:53574641-53574660 Msa0170010:intron 35.0%
! TGGAAGAGTATGCTAAGAAA+GGG - chr1_4:53574642-53574661 Msa0170010:intron 35.0%
TATATACCTCAATGTTGGAG+TGG + chr1_4:53574690-53574709 None:intergenic 35.0%
AGTACTTCATCTCTACTTGA+CGG - chr1_4:53574896-53574915 Msa0170010:intron 35.0%
! CTTCCGCAACAACTTTTTAA+AGG - chr1_4:53574968-53574987 Msa0170010:intron 35.0%
TAGATGGTTAACGTATCAAC+AGG - chr1_4:53575028-53575047 Msa0170010:intron 35.0%
GTTAAACACGTCCAAATTTG+TGG + chr1_4:53575091-53575110 None:intergenic 35.0%
!!! TAATTTTTTACGGGTTCACG+TGG + chr1_4:53575142-53575161 None:intergenic 35.0%
TCTATGACCGTTTCTTTGTA+AGG - chr1_4:53575532-53575551 Msa0170010:intron 35.0%
AGATTAACCAAGAATCCAAG+AGG - chr1_4:53575564-53575583 Msa0170010:intron 35.0%
GATTAACCAAGAATCCAAGA+GGG - chr1_4:53575565-53575584 Msa0170010:intron 35.0%
GATTACCCTTCTTCAAAGAA+TGG - chr1_4:53575587-53575606 Msa0170010:intron 35.0%
! CAATTCCCATTCTTTGAAGA+AGG + chr1_4:53575596-53575615 None:intergenic 35.0%
CTTCTTCAAAGAATGGGAAT+TGG - chr1_4:53575594-53575613 Msa0170010:intron 35.0%
GAACATGGTTTAGTTGAAAG+TGG - chr1_4:53575687-53575706 Msa0170010:intron 35.0%
GCTTCCTCAGTTTATACTTA+TGG - chr1_4:53575740-53575759 Msa0170010:intron 35.0%
GTTCCCATAAGTATAAACTG+AGG + chr1_4:53575747-53575766 None:intergenic 35.0%
ACTAAGGAACATGGTCATAA+AGG - chr1_4:53575918-53575937 Msa0170010:intron 35.0%
CTAAGGAACATGGTCATAAA+GGG - chr1_4:53575919-53575938 Msa0170010:intron 35.0%
TGTATATAGGGCTGAAGTTT+CGG - chr1_4:53576049-53576068 Msa0170010:five_prime_UTR 35.0%
TGAACTGAAGGAAAAGAAAG+CGG - chr1_4:53576094-53576113 Msa0170010:five_prime_UTR 35.0%
CTTATTCTATAAGGTTCGCA+TGG + chr1_4:53576124-53576143 None:intergenic 35.0%
! TTGCAGCATGCTCAATGTTT+TGG - chr1_4:53571544-53571563 Msa0170010:three_prime_UTR 40.0%
! TGCAGCATGCTCAATGTTTT+GGG - chr1_4:53571545-53571564 Msa0170010:three_prime_UTR 40.0%
!! CGATTCGGTAATTGATTCGT+TGG - chr1_4:53571785-53571804 Msa0170010:CDS 40.0%
GTGTACAGTACAGGTACAAT+GGG - chr1_4:53572161-53572180 Msa0170010:CDS 40.0%
TAGCTCGCAAACCTCTTAAT+TGG + chr1_4:53572262-53572281 None:intergenic 40.0%
! TCATTAGGGGAGAGTACAAT+AGG + chr1_4:53572450-53572469 None:intergenic 40.0%
TACTCTCCCCTAATGAAATC+AGG - chr1_4:53572454-53572473 Msa0170010:intron 40.0%
ACTCTCCCCTAATGAAATCA+GGG - chr1_4:53572455-53572474 Msa0170010:intron 40.0%
CAGATTCAAGCCAAACATTC+TGG - chr1_4:53572683-53572702 Msa0170010:intron 40.0%
TCAAAGGCTACCAGAATGTT+TGG + chr1_4:53572696-53572715 None:intergenic 40.0%
AAATGCGTTGTATGCTGAGT+TGG + chr1_4:53572752-53572771 None:intergenic 40.0%
AACGCATAAGGCATATGCAT+TGG + chr1_4:53572802-53572821 None:intergenic 40.0%
! ACTTTTATCCAAGATGCCAG+AGG - chr1_4:53572883-53572902 Msa0170010:intron 40.0%
AGTTGCTCAAACTTCTATGG+CGG + chr1_4:53573028-53573047 None:intergenic 40.0%
TTAATCACTAGAGTGCACTG+AGG - chr1_4:53573147-53573166 Msa0170010:CDS 40.0%
TCACATCAGTTCATGATGCT+TGG + chr1_4:53573197-53573216 None:intergenic 40.0%
!! TTGCTGTGAAGCTTTGGAAT+TGG + chr1_4:53573251-53573270 None:intergenic 40.0%
!! GTTCTTTTGCTGTGAAGCTT+TGG + chr1_4:53573257-53573276 None:intergenic 40.0%
! TTTTATTGAGTCGAACCGAG+TGG - chr1_4:53573438-53573457 Msa0170010:CDS 40.0%
AAAGTTCGGTTCAGCTCATT+AGG + chr1_4:53573532-53573551 None:intergenic 40.0%
TGATCTATGTTGGAACATGC+AGG - chr1_4:53574109-53574128 Msa0170010:intron 40.0%
GATCTATGTTGGAACATGCA+GGG - chr1_4:53574110-53574129 Msa0170010:intron 40.0%
TCTAATTCATGGCATTGTGG+TGG + chr1_4:53574179-53574198 None:intergenic 40.0%
GCACTTTACACTCTAGCAAT+AGG - chr1_4:53574251-53574270 Msa0170010:intron 40.0%
TACACTCTAGCAATAGGAAC+AGG - chr1_4:53574257-53574276 Msa0170010:intron 40.0%
! GCACCAATGGTTGATATGTT+GGG + chr1_4:53574293-53574312 None:intergenic 40.0%
! AGCACCAATGGTTGATATGT+TGG + chr1_4:53574294-53574313 None:intergenic 40.0%
ATCAAATTGGTCAGCACCAA+TGG + chr1_4:53574306-53574325 None:intergenic 40.0%
GAGTCCAACCAACATTATCT+TGG + chr1_4:53574433-53574452 None:intergenic 40.0%
! GATAATGTTGGTTGGACTCT+TGG - chr1_4:53574434-53574453 Msa0170010:intron 40.0%
GGATATGCTTTACCAACTCT+AGG - chr1_4:53574455-53574474 Msa0170010:intron 40.0%
TATAGACACAAATTGCCTGC+AGG - chr1_4:53574521-53574540 Msa0170010:intron 40.0%
ATAGACACAAATTGCCTGCA+GGG - chr1_4:53574522-53574541 Msa0170010:intron 40.0%
!! AGGGAGTACTTTCACTAGAA+TGG - chr1_4:53574541-53574560 Msa0170010:intron 40.0%
GTACTTTCACTAGAATGGCT+AGG - chr1_4:53574546-53574565 Msa0170010:intron 40.0%
TTGATTCCACTCCAACATTG+AGG - chr1_4:53574681-53574700 Msa0170010:intron 40.0%
ACACGGACACTTCAAATTGA+AGG - chr1_4:53574744-53574763 Msa0170010:intron 40.0%
TGTCTGACACATATCAATGC+TGG - chr1_4:53574770-53574789 Msa0170010:intron 40.0%
ACACATATCAATGCTGGACA+TGG - chr1_4:53574776-53574795 Msa0170010:intron 40.0%
AGGGTTAACGCAGTTCAAAT+AGG - chr1_4:53574988-53575007 Msa0170010:intron 40.0%
GTTAACGCAGTTCAAATAGG+TGG - chr1_4:53574991-53575010 Msa0170010:intron 40.0%
! TTTTGACACTTGCCTTGTCT+AGG + chr1_4:53575275-53575294 None:intergenic 40.0%
GTAACTGTGCATAACATCCA+TGG + chr1_4:53575312-53575331 None:intergenic 40.0%
ACTTGAGCCATCATTGTACT+TGG + chr1_4:53575396-53575415 None:intergenic 40.0%
ACAACACTTGACAGACACAT+TGG - chr1_4:53575441-53575460 Msa0170010:intron 40.0%
TGGAAGCTTCAAAATTCCAC+CGG - chr1_4:53575461-53575480 Msa0170010:intron 40.0%
ACAAATGCAGCTAAACTTGC+CGG + chr1_4:53575483-53575502 None:intergenic 40.0%
CTTAGAGTGGCAAAAGAACA+TGG - chr1_4:53575672-53575691 Msa0170010:intron 40.0%
CATGGTTTAGTTGAAAGTGG+AGG - chr1_4:53575690-53575709 Msa0170010:intron 40.0%
CCAATACTCTTCATGCTTTC+TGG + chr1_4:53575822-53575841 None:intergenic 40.0%
! CCAGAAAGCATGAAGAGTAT+TGG - chr1_4:53575819-53575838 Msa0170010:intron 40.0%
TCTTCGACTACATTAGGCAT+TGG - chr1_4:53575852-53575871 Msa0170010:intron 40.0%
TCGCGATTAACTAAGGAACA+TGG - chr1_4:53575909-53575928 Msa0170010:intron 40.0%
TCTTCTTCGCGATTGTTACA+AGG - chr1_4:53576021-53576040 Msa0170010:five_prime_UTR 40.0%
TGTTGGACCTTAAGAACCCT+TGG + chr1_4:53571316-53571335 None:intergenic 45.0%
!! GGTAATTGATTCGTTGGACG+TGG - chr1_4:53571791-53571810 Msa0170010:CDS 45.0%
CGTGTACAGTACAGGTACAA+TGG - chr1_4:53572160-53572179 Msa0170010:CDS 45.0%
CAGTACAGGTACAATGGGAA+TGG - chr1_4:53572166-53572185 Msa0170010:CDS 45.0%
! GGGGAGAGTACAATAGGAAT+AGG + chr1_4:53572444-53572463 None:intergenic 45.0%
! GCTGATAGCCTTGCAAATCT+AGG + chr1_4:53572523-53572542 None:intergenic 45.0%
CTTGGAGCTTGAGGAATAGA+TGG + chr1_4:53572618-53572637 None:intergenic 45.0%
CATCTATTCCTCAAGCTCCA+AGG - chr1_4:53572616-53572635 Msa0170010:intron 45.0%
AATCCCTTGAAAGCTTCTGC+AGG + chr1_4:53572838-53572857 None:intergenic 45.0%
TTTATCCAAGATGCCAGAGG+TGG - chr1_4:53572886-53572905 Msa0170010:intron 45.0%
TTATCCAAGATGCCAGAGGT+GGG - chr1_4:53572887-53572906 Msa0170010:intron 45.0%
AGTCACTATCAGACCTCCTA+GGG + chr1_4:53572941-53572960 None:intergenic 45.0%
AAGTCACTATCAGACCTCCT+AGG + chr1_4:53572942-53572961 None:intergenic 45.0%
GTTGCTCAAACTTCTATGGC+GGG + chr1_4:53573027-53573046 None:intergenic 45.0%
GGGAGAGACAAAGTCAACTA+TGG + chr1_4:53573349-53573368 None:intergenic 45.0%
! AGTTGACTTTGTCTCTCCCA+TGG - chr1_4:53573350-53573369 Msa0170010:CDS 45.0%
GAGTTTAACTCAGCTCCACT+CGG + chr1_4:53573456-53573475 None:intergenic 45.0%
! AATTTGCTCGGCTCGAAACT+CGG + chr1_4:53573613-53573632 None:intergenic 45.0%
CACATAATTCAGTGTAGGGC+TGG + chr1_4:53573677-53573696 None:intergenic 45.0%
!! CATTGTGGTGGCTTTAAGGT+AGG + chr1_4:53574167-53574186 None:intergenic 45.0%
! ATGGCATTGTGGTGGCTTTA+AGG + chr1_4:53574171-53574190 None:intergenic 45.0%
ACTCTAGCAATAGGAACAGG+TGG - chr1_4:53574260-53574279 Msa0170010:intron 45.0%
GACAAGGCAAGTGTCAAAAC+AGG - chr1_4:53575276-53575295 Msa0170010:intron 45.0%
AAACAGGCTCAACTAGTCCA+TGG - chr1_4:53575292-53575311 Msa0170010:intron 45.0%
GAGCACTACACAAACAAGCA+AGG + chr1_4:53575514-53575533 None:intergenic 45.0%
GGTAATCCCTCTTGGATTCT+TGG + chr1_4:53575574-53575593 None:intergenic 45.0%
TGAAGAAGGGTAATCCCTCT+TGG + chr1_4:53575582-53575601 None:intergenic 45.0%
GACAGTGTCGCGATTAACTA+AGG - chr1_4:53575902-53575921 Msa0170010:intron 45.0%
AGGAACATGGTCATAAAGGG+TGG - chr1_4:53575922-53575941 Msa0170010:intron 45.0%
CATGCTTGCCAATGAACTGA+AGG - chr1_4:53576082-53576101 Msa0170010:five_prime_UTR 45.0%
!!! AATTAATTATATTGTTATTT+AGG - chr1_4:53571617-53571636 Msa0170010:CDS 5.0%
!! CATATATTAATTTATTATTT+AGG - chr1_4:53575247-53575266 Msa0170010:intron 5.0%
!! TTCGATAGTGGACTGGACCA+AGG - chr1_4:53571296-53571315 Msa0170010:three_prime_UTR 50.0%
!! TCGATAGTGGACTGGACCAA+GGG - chr1_4:53571297-53571316 Msa0170010:three_prime_UTR 50.0%
GACTGGACCAAGGGTTCTTA+AGG - chr1_4:53571306-53571325 Msa0170010:three_prime_UTR 50.0%
! AAGAGAGGCGTGTACAGTAC+AGG - chr1_4:53572152-53572171 Msa0170010:CDS 50.0%
CTGTGATACCTTGGAGCTTG+AGG + chr1_4:53572627-53572646 None:intergenic 50.0%
! TGCGTTGTATGCTGAGTTGG+TGG + chr1_4:53572749-53572768 None:intergenic 50.0%
TCCACCTGCAGAAGCTTTCA+AGG - chr1_4:53572831-53572850 Msa0170010:intron 50.0%
CCACCTGCAGAAGCTTTCAA+GGG - chr1_4:53572832-53572851 Msa0170010:intron 50.0%
TATCCAAGATGCCAGAGGTG+GGG - chr1_4:53572888-53572907 Msa0170010:intron 50.0%
AGTTATTTGGTCCCCACCTC+TGG + chr1_4:53572902-53572921 None:intergenic 50.0%
! TCTTTGATAGTCGGAGCCCT+AGG - chr1_4:53572922-53572941 Msa0170010:intron 50.0%
TTATCGAGTCGAGCTCAGAC+AGG - chr1_4:53573634-53573653 Msa0170010:intron 50.0%
!! CTAGTGAAAGTACTCCCTGC+AGG + chr1_4:53574539-53574558 None:intergenic 50.0%
AATGCAGCTAAACTTGCCGG+TGG + chr1_4:53575480-53575499 None:intergenic 50.0%
ATCGCGACACTGTCGACAAA+AGG + chr1_4:53575896-53575915 None:intergenic 50.0%
AAGGACATGGTGCTCCTGTG+AGG - chr1_4:53571423-53571442 Msa0170010:three_prime_UTR 55.0%
!! TCCTGTGAGGCTAGTGGGTT+GGG - chr1_4:53571436-53571455 Msa0170010:three_prime_UTR 55.0%
CCCTTGAAAGCTTCTGCAGG+TGG + chr1_4:53572835-53572854 None:intergenic 55.0%
! TTGATAGTCGGAGCCCTAGG+AGG - chr1_4:53572925-53572944 Msa0170010:intron 55.0%
GTCAGAGTCCGTGTCGTGTT+CGG - chr1_4:53573727-53573746 Msa0170010:intron 55.0%
TACGGACACCGAACACGACA+CGG + chr1_4:53573738-53573757 None:intergenic 55.0%
TGGTGCTCCTGTGAGGCTAG+TGG - chr1_4:53571430-53571449 Msa0170010:three_prime_UTR 60.0%
GGTGCTCCTGTGAGGCTAGT+GGG - chr1_4:53571431-53571450 Msa0170010:three_prime_UTR 60.0%
! CTCCTGTGAGGCTAGTGGGT+TGG - chr1_4:53571435-53571454 Msa0170010:three_prime_UTR 60.0%
! TCCCAACCCACTAGCCTCAC+AGG + chr1_4:53571440-53571459 None:intergenic 60.0%
GGTCCCCACCTCTGGCATCT+TGG + chr1_4:53572894-53572913 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 53571282 53576432 53571282 ID=Msa0170010;Name=Msa0170010
chr1_4 mRNA 53571282 53576432 53571282 ID=Msa0170010-mRNA-1;Parent=Msa0170010;Name=Msa0170010-mRNA-1;_AED=0.26;_eAED=0.26;_QI=525|1|1|1|0.5|0.33|3|290|483
chr1_4 exon 53571282 53572445 53571282 ID=Msa0170010-mRNA-1:exon:15945;Parent=Msa0170010-mRNA-1
chr1_4 exon 53573012 53573621 53573012 ID=Msa0170010-mRNA-1:exon:15944;Parent=Msa0170010-mRNA-1
chr1_4 exon 53575940 53576432 53575940 ID=Msa0170010-mRNA-1:exon:15943;Parent=Msa0170010-mRNA-1
chr1_4 five_prime_UTR 53575940 53576432 53575940 ID=Msa0170010-mRNA-1:five_prime_utr;Parent=Msa0170010-mRNA-1
chr1_4 five_prime_UTR 53573590 53573621 53573590 ID=Msa0170010-mRNA-1:five_prime_utr;Parent=Msa0170010-mRNA-1
chr1_4 CDS 53573012 53573589 53573012 ID=Msa0170010-mRNA-1:cds;Parent=Msa0170010-mRNA-1
chr1_4 CDS 53571572 53572445 53571572 ID=Msa0170010-mRNA-1:cds;Parent=Msa0170010-mRNA-1
chr1_4 three_prime_UTR 53571282 53571571 53571282 ID=Msa0170010-mRNA-1:three_prime_utr;Parent=Msa0170010-mRNA-1
Gene Sequence

>Msa0170010

ATGCAGGGTATGTCTCTGCTTACACTAGCAGTGTCACTTCCTACCTTAAAGCCACCACAATGCCATGAATTAGATGTAACAAAATGCAAAAAAGCCTCTACATTACAATTAGCTGTGTTTTATGGTGCACTTTACACTCTAGCAATAGGAACAGGTGGAACAAAACCCAACATATCAACCATTGGTGCTGACCAATTTGATGATTTTCACCCTAAAGAAAAATCACATAAACTTTCATTTTTCAATTGGTGGATGTTTAGCATCTTCTTTGGGACCCTTTTTGCTAATACTGTTCTAGTTTATATCCAAGATAATGTTGGTTGGACTCTTGGATATGCTTTACCAACTCTAGGATTAGCAATATCAATTATGATATTCTTGGCAGGAACACCCTTTTATAGACACAAATTGCCTGCAGGGAGTACTTTCACTAGAATGGCTAGGGTTATAGTTGCTTCTTTGAGAAAATGGAAAGTACCTGTTCCTGATGATACTAAAGAACTATATGAACTTGATATGGAAGAGTATGCTAAGAAAGGGAGTAACACTTACAGAATTGATTCCACTCCAACATTGAGGTTCCTAGACAAGGCAAGTGTCAAAACAGGCTCAACTAGTCCATGGATGTTATGCACAGTTACACATGTAGAAGAGACAAAACAAATGTTAAGGATGATTCCAATATTGGTTGCTACATTTGTTCCAAGTACAATGATGGCTCAAGTAAACACCCTTTTTGTTAAACAAGGAACAACACTTGACAGACACATTGGAAGCTTCAAAATTCCACCGGCAAGTTTAGCTGCATTTGTCACATTGTCCTTGCTTGTTTGTGTAGTGCTCTATGACCGTTTCTTTGTAAGGATTATGCAGAGATTAACCAAGAATCCAAGAGGGATTACCCTTCTTCAAAGAATGGGAATTGGTCTTGTTCTTCACACAATTATTATGGTAGTTGCATCTGTGACAGAAAATTATAGGCTTAGAGTGGCAAAAGAACATGGTTTAGTTGAAAGTGGAGGACAAGTTCCTTTGAGTATTTTCATTTTGCTTCCTCAGTTTATACTTATGGGAACAGCTGATGCATTTTTAGAGGTTGCGAAAATCGAGTTTTTCTATGATCAAGCTCCAGAAAGCATGAAGAGTATTGGAACTTCATATTCTTCGACTACATTAGGCATTGGAAATTTCATCAGTTCATTCCTTTTGTCGACAGTGTCGCGATTAACTAAGGAACATGGTCATAAAGGGTGGATTTTGAACAATCTGAATGATTCTCATCTTGATTACTACTACGCGTTTTTCGCAGTGTTGAACTTCTTGAACTTAATCTTCTTCGCGATTGTTACAAGGCTTTATGTATATAGGGCTGAAGTTTCGGATTCTATAGACATGCTTGCCAATGAACTGAAGGAAAAGAAAGCGGTTAACCATGCGAACCTTATAGAATAA
Protein sequence

>Msa0170010

MQGMSLLTLAVSLPTLKPPQCHELDVTKCKKASTLQLAVFYGALYTLAIGTGGTKPNISTIGADQFDDFHPKEKSHKLSFFNWWMFSIFFGTLFANTVLVYIQDNVGWTLGYALPTLGLAISIMIFLAGTPFYRHKLPAGSTFTRMARVIVASLRKWKVPVPDDTKELYELDMEEYAKKGSNTYRIDSTPTLRFLDKASVKTGSTSPWMLCTVTHVEETKQMLRMIPILVATFVPSTMMAQVNTLFVKQGTTLDRHIGSFKIPPASLAAFVTLSLLVCVVLYDRFFVRIMQRLTKNPRGITLLQRMGIGLVLHTIIMVVASVTENYRLRVAKEHGLVESGGQVPLSIFILLPQFILMGTADAFLEVAKIEFFYDQAPESMKSIGTSYSSTTLGIGNFISSFLLSTVSRLTKEHGHKGWILNNLNDSHLDYYYAFFAVLNFLNLIFFAIVTRLYVYRAEVSDSIDMLANELKEKKAVNHANLIE*