Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390230 | XP_003600707.2 | 99.487 | 195 | 1 | 0 | 1 | 195 | 23 | 217 | 1.89e-138 | 395 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390230 | sp|Q9LQU5|NUD18_ARATH | 68.987 | 158 | 47 | 1 | 10 | 167 | 1 | 156 | 2.54e-74 | 224 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390230 | A0A396IVT9 | 99.487 | 195 | 1 | 0 | 1 | 195 | 23 | 217 | 9.04e-139 | 395 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1390230 | -0.831515 | 1.598189e-55 | -8.615850e-47 |
| Msa0006880 | Msa1390230 | 0.808259 | 3.381104e-50 | -8.615850e-47 |
| Msa0015680 | Msa1390230 | 0.816547 | 5.228772e-52 | -8.615850e-47 |
| Msa0027580 | Msa1390230 | 0.807742 | 4.356894e-50 | -8.615850e-47 |
| Msa0030280 | Msa1390230 | 0.813903 | 2.022480e-51 | -8.615850e-47 |
| Msa0032370 | Msa1390230 | 0.843261 | 1.561776e-58 | -8.615850e-47 |
| Msa0039250 | Msa1390230 | 0.800269 | 1.559933e-48 | -8.615850e-47 |
| Msa0055150 | Msa1390230 | 0.806704 | 7.229456e-50 | -8.615850e-47 |
| Msa0057140 | Msa1390230 | 0.800524 | 1.384234e-48 | -8.615850e-47 |
| Msa0075340 | Msa1390230 | 0.806025 | 1.004974e-49 | -8.615850e-47 |
| Msa0077880 | Msa1390230 | 0.806310 | 8.752505e-50 | -8.615850e-47 |
| Msa0090030 | Msa1390230 | 0.839331 | 1.689659e-57 | -8.615850e-47 |
| Msa0094010 | Msa1390230 | 0.825398 | 4.790616e-54 | -8.615850e-47 |
| Msa0097950 | Msa1390230 | 0.826617 | 2.459389e-54 | -8.615850e-47 |
| Msa0099510 | Msa1390230 | 0.818949 | 1.500564e-52 | -8.615850e-47 |
| Msa0100800 | Msa1390230 | 0.841278 | 5.234136e-58 | -8.615850e-47 |
| Msa0104610 | Msa1390230 | 0.825052 | 5.782494e-54 | -8.615850e-47 |
| Msa1344850 | Msa1390230 | 0.803695 | 3.082943e-49 | -8.615850e-47 |
| Msa1355700 | Msa1390230 | 0.804051 | 2.600609e-49 | -8.615850e-47 |
| Msa1360890 | Msa1390230 | -0.823246 | 1.535753e-53 | -8.615850e-47 |
| Msa1362510 | Msa1390230 | 0.820208 | 7.743744e-53 | -8.615850e-47 |
| Msa1363700 | Msa1390230 | 0.824288 | 8.754380e-54 | -8.615850e-47 |
| Msa1365150 | Msa1390230 | 0.802421 | 5.654984e-49 | -8.615850e-47 |
| Msa1380970 | Msa1390230 | 0.802348 | 5.854771e-49 | -8.615850e-47 |
| Msa1386230 | Msa1390230 | 0.828406 | 9.149054e-55 | -8.615850e-47 |
| Msa1388450 | Msa1390230 | 0.810803 | 9.609947e-51 | -8.615850e-47 |
| Msa1390230 | Msa1390310 | 0.838875 | 2.217183e-57 | -8.615850e-47 |
| Msa1390230 | Msa1398860 | 0.816166 | 6.362536e-52 | -8.615850e-47 |
| Msa1390230 | Msa1404540 | 0.820642 | 6.156259e-53 | -8.615850e-47 |
| Msa1390230 | Msa1415940 | 0.813065 | 3.090610e-51 | -8.615850e-47 |
| Msa1390230 | Msa1422910 | 0.811748 | 5.994180e-51 | -8.615850e-47 |
| Msa1390230 | Msa1431060 | 0.830427 | 2.954312e-55 | -8.615850e-47 |
| Msa1390230 | Msa1435400 | 0.804390 | 2.210238e-49 | -8.615850e-47 |
| Msa1390230 | Msa1438640 | 0.817112 | 3.903502e-52 | -8.615850e-47 |
| Msa1390230 | Msa1439960 | 0.811003 | 8.701313e-51 | -8.615850e-47 |
| Msa1390230 | Msa1442220 | -0.817590 | 3.047789e-52 | -8.615850e-47 |
| Msa1390230 | Msa1442850 | 0.806439 | 8.221602e-50 | -8.615850e-47 |
| Msa1390230 | Msa1447110 | 0.810072 | 1.382716e-50 | -8.615850e-47 |
| Msa1390230 | Msa1449910 | 0.803272 | 3.773867e-49 | -8.615850e-47 |
| Msa1390230 | Msa1452480 | 0.820577 | 6.373562e-53 | -8.615850e-47 |
| Msa0603670 | Msa1390230 | 0.800877 | 1.172624e-48 | -8.615850e-47 |
| Msa0610500 | Msa1390230 | 0.802427 | 5.638208e-49 | -8.615850e-47 |
| Msa0619070 | Msa1390230 | 0.809159 | 2.171826e-50 | -8.615850e-47 |
| Msa0626680 | Msa1390230 | 0.812786 | 3.557624e-51 | -8.615850e-47 |
| Msa0633760 | Msa1390230 | 0.802052 | 6.735239e-49 | -8.615850e-47 |
| Msa0639120 | Msa1390230 | 0.800104 | 1.685464e-48 | -8.615850e-47 |
| Msa0640500 | Msa1390230 | 0.806183 | 9.309566e-50 | -8.615850e-47 |
| Msa0641140 | Msa1390230 | 0.843621 | 1.252139e-58 | -8.615850e-47 |
| Msa0643250 | Msa1390230 | 0.812894 | 3.369502e-51 | -8.615850e-47 |
| Msa0646130 | Msa1390230 | 0.823823 | 1.125821e-53 | -8.615850e-47 |
| Msa0651150 | Msa1390230 | 0.818711 | 1.699480e-52 | -8.615850e-47 |
| Msa0656580 | Msa1390230 | 0.818844 | 1.585155e-52 | -8.615850e-47 |
| Msa0664760 | Msa1390230 | 0.831670 | 1.463641e-55 | -8.615850e-47 |
| Msa0669850 | Msa1390230 | 0.810984 | 8.780859e-51 | -8.615850e-47 |
| Msa0679680 | Msa1390230 | 0.834162 | 3.514792e-56 | -8.615850e-47 |
| Msa0693380 | Msa1390230 | 0.806349 | 8.587070e-50 | -8.615850e-47 |
| Msa0711490 | Msa1390230 | 0.836171 | 1.094294e-56 | -8.615850e-47 |
| Msa0714960 | Msa1390230 | 0.800169 | 1.634605e-48 | -8.615850e-47 |
| Msa0715110 | Msa1390230 | 0.829105 | 6.200649e-55 | -8.615850e-47 |
| Msa0715140 | Msa1390230 | 0.807664 | 4.527010e-50 | -8.615850e-47 |
| Msa0715150 | Msa1390230 | 0.829896 | 3.982891e-55 | -8.615850e-47 |
| Msa0735310 | Msa1390230 | 0.818060 | 2.386497e-52 | -8.615850e-47 |
| Msa0737800 | Msa1390230 | 0.801585 | 8.401151e-49 | -8.615850e-47 |
| Msa0743680 | Msa1390230 | 0.835484 | 1.633424e-56 | -8.615850e-47 |
| Msa0744090 | Msa1390230 | 0.830451 | 2.914711e-55 | -8.615850e-47 |
| Msa0750920 | Msa1390230 | 0.811647 | 6.304944e-51 | -8.615850e-47 |
| Msa0753770 | Msa1390230 | 0.811330 | 7.389543e-51 | -8.615850e-47 |
| Msa0754720 | Msa1390230 | -0.833174 | 6.206959e-56 | -8.615850e-47 |
| Msa0757050 | Msa1390230 | 0.808805 | 2.585409e-50 | -8.615850e-47 |
| Msa0779550 | Msa1390230 | 0.803185 | 3.932828e-49 | -8.615850e-47 |
| Msa0784620 | Msa1390230 | 0.847938 | 8.426111e-60 | -8.615850e-47 |
| Msa0798030 | Msa1390230 | 0.801280 | 9.698635e-49 | -8.615850e-47 |
| Msa0814250 | Msa1390230 | 0.822936 | 1.814360e-53 | -8.615850e-47 |
| Msa0814320 | Msa1390230 | 0.825120 | 5.575019e-54 | -8.615850e-47 |
| Msa0817270 | Msa1390230 | 0.804201 | 2.420172e-49 | -8.615850e-47 |
| Msa0819560 | Msa1390230 | 0.813622 | 2.331371e-51 | -8.615850e-47 |
| Msa0824730 | Msa1390230 | 0.846950 | 1.574187e-59 | -8.615850e-47 |
| Msa0825280 | Msa1390230 | 0.832698 | 8.148883e-56 | -8.615850e-47 |
| Msa0131450 | Msa1390230 | 0.801416 | 9.098749e-49 | -8.615850e-47 |
| Msa0133720 | Msa1390230 | 0.804069 | 2.578707e-49 | -8.615850e-47 |
| Msa0135420 | Msa1390230 | 0.820634 | 6.184234e-53 | -8.615850e-47 |
| Msa0137040 | Msa1390230 | 0.802883 | 4.541422e-49 | -8.615850e-47 |
| Msa0138970 | Msa1390230 | -0.819259 | 1.275967e-52 | -8.615850e-47 |
| Msa0156230 | Msa1390230 | 0.812617 | 3.873675e-51 | -8.615850e-47 |
| Msa0164220 | Msa1390230 | 0.802491 | 5.471986e-49 | -8.615850e-47 |
| Msa0165300 | Msa1390230 | 0.806089 | 9.741335e-50 | -8.615850e-47 |
| Msa0172350 | Msa1390230 | 0.831768 | 1.383997e-55 | -8.615850e-47 |
| Msa0181520 | Msa1390230 | 0.816979 | 4.183000e-52 | -8.615850e-47 |
| Msa0183590 | Msa1390230 | 0.804236 | 2.379639e-49 | -8.615850e-47 |
| Msa0185590 | Msa1390230 | 0.893382 | 6.621282e-75 | -8.615850e-47 |
| Msa0198520 | Msa1390230 | 0.838883 | 2.206294e-57 | -8.615850e-47 |
| Msa0198530 | Msa1390230 | 0.842983 | 1.853034e-58 | -8.615850e-47 |
| Msa0208810 | Msa1390230 | 0.822887 | 1.862822e-53 | -8.615850e-47 |
| Msa0211650 | Msa1390230 | 0.814346 | 1.614475e-51 | -8.615850e-47 |
| Msa0222920 | Msa1390230 | 0.809326 | 1.999600e-50 | -8.615850e-47 |
| Msa0227400 | Msa1390230 | 0.837846 | 4.084429e-57 | -8.615850e-47 |
| Msa0232320 | Msa1390230 | 0.810552 | 1.089079e-50 | -8.615850e-47 |
| Msa1227690 | Msa1390230 | 0.802776 | 4.778986e-49 | -8.615850e-47 |
| Msa1228890 | Msa1390230 | 0.804954 | 1.685579e-49 | -8.615850e-47 |
| Msa1231240 | Msa1390230 | 0.800344 | 1.506264e-48 | -8.615850e-47 |
| Msa1236070 | Msa1390230 | -0.801869 | 7.346737e-49 | -8.615850e-47 |
| Msa1249920 | Msa1390230 | 0.811964 | 5.380717e-51 | -8.615850e-47 |
| Msa1254710 | Msa1390230 | 0.816613 | 5.053446e-52 | -8.615850e-47 |
| Msa1267840 | Msa1390230 | 0.801032 | 1.090060e-48 | -8.615850e-47 |
| Msa1280620 | Msa1390230 | 0.832358 | 9.891825e-56 | -8.615850e-47 |
| Msa1294840 | Msa1390230 | 0.808571 | 2.901578e-50 | -8.615850e-47 |
| Msa1294960 | Msa1390230 | 0.812630 | 3.848647e-51 | -8.615850e-47 |
| Msa1311960 | Msa1390230 | 0.822339 | 2.497704e-53 | -8.615850e-47 |
| Msa1329450 | Msa1390230 | 0.802147 | 6.440194e-49 | -8.615850e-47 |
| Msa1337730 | Msa1390230 | 0.812260 | 4.635768e-51 | -8.615850e-47 |
| Msa1338250 | Msa1390230 | 0.803622 | 3.192093e-49 | -8.615850e-47 |
| Msa0377530 | Msa1390230 | 0.841720 | 4.004969e-58 | -8.615850e-47 |
| Msa0393950 | Msa1390230 | 0.827809 | 1.274128e-54 | -8.615850e-47 |
| Msa0394400 | Msa1390230 | 0.811529 | 6.690616e-51 | -8.615850e-47 |
| Msa0402330 | Msa1390230 | 0.803153 | 3.993784e-49 | -8.615850e-47 |
| Msa0413450 | Msa1390230 | 0.820511 | 6.600301e-53 | -8.615850e-47 |
| Msa0415810 | Msa1390230 | 0.893228 | 7.639978e-75 | -8.615850e-47 |
| Msa0426330 | Msa1390230 | 0.811650 | 6.295052e-51 | -8.615850e-47 |
| Msa0426810 | Msa1390230 | 0.824448 | 8.026974e-54 | -8.615850e-47 |
| Msa0460930 | Msa1390230 | 0.878029 | 3.907012e-69 | -8.615850e-47 |
| Msa0461590 | Msa1390230 | 0.815309 | 9.878017e-52 | -8.615850e-47 |
| Msa0462220 | Msa1390230 | 0.824946 | 6.127289e-54 | -8.615850e-47 |
| Msa0464900 | Msa1390230 | 0.813229 | 2.844866e-51 | -8.615850e-47 |
| Msa0465920 | Msa1390230 | 0.815715 | 8.018954e-52 | -8.615850e-47 |
| Msa0465960 | Msa1390230 | 0.807657 | 4.541331e-50 | -8.615850e-47 |
| Msa0466760 | Msa1390230 | 0.810705 | 1.009293e-50 | -8.615850e-47 |
| Msa0474700 | Msa1390230 | 0.807921 | 3.991122e-50 | -8.615850e-47 |
| Msa0981430 | Msa1390230 | 0.806004 | 1.015466e-49 | -8.615850e-47 |
| Msa0985550 | Msa1390230 | 0.832336 | 1.001950e-55 | -8.615850e-47 |
| Msa0986920 | Msa1390230 | 0.815043 | 1.131462e-51 | -8.615850e-47 |
| Msa0990590 | Msa1390230 | 0.800271 | 1.558539e-48 | -8.615850e-47 |
| Msa0993530 | Msa1390230 | 0.815766 | 7.814143e-52 | -8.615850e-47 |
| Msa1003440 | Msa1390230 | 0.812628 | 3.853597e-51 | -8.615850e-47 |
| Msa1030930 | Msa1390230 | 0.813775 | 2.158334e-51 | -8.615850e-47 |
| Msa1033660 | Msa1390230 | 0.803291 | 3.739169e-49 | -8.615850e-47 |
| Msa1040800 | Msa1390230 | 0.803376 | 3.590540e-49 | -8.615850e-47 |
| Msa1040890 | Msa1390230 | 0.818725 | 1.687199e-52 | -8.615850e-47 |
| Msa1041520 | Msa1390230 | 0.836174 | 1.091939e-56 | -8.615850e-47 |
| Msa1046300 | Msa1390230 | 0.806226 | 9.117663e-50 | -8.615850e-47 |
| Msa1070050 | Msa1390230 | 0.814615 | 1.408027e-51 | -8.615850e-47 |
| Msa1073400 | Msa1390230 | 0.803457 | 3.454865e-49 | -8.615850e-47 |
| Msa1081560 | Msa1390230 | 0.830439 | 2.935184e-55 | -8.615850e-47 |
| Msa1083210 | Msa1390230 | 0.835939 | 1.253277e-56 | -8.615850e-47 |
| Msa1083880 | Msa1390230 | 0.812904 | 3.352604e-51 | -8.615850e-47 |
| Msa1092820 | Msa1390230 | 0.800543 | 1.371996e-48 | -8.615850e-47 |
| Msa1093330 | Msa1390230 | 0.819052 | 1.422163e-52 | -8.615850e-47 |
| Msa0239450 | Msa1390230 | 0.800812 | 1.209099e-48 | -8.615850e-47 |
| Msa0239510 | Msa1390230 | 0.804785 | 1.828279e-49 | -8.615850e-47 |
| Msa0242680 | Msa1390230 | 0.805016 | 1.636156e-49 | -8.615850e-47 |
| Msa0242760 | Msa1390230 | 0.826554 | 2.545025e-54 | -8.615850e-47 |
| Msa0245850 | Msa1390230 | 0.851754 | 7.222111e-61 | -8.615850e-47 |
| Msa0246010 | Msa1390230 | 0.805837 | 1.100709e-49 | -8.615850e-47 |
| Msa0251250 | Msa1390230 | 0.814531 | 1.469648e-51 | -8.615850e-47 |
| Msa0252240 | Msa1390230 | 0.824333 | 8.543985e-54 | -8.615850e-47 |
| Msa0259270 | Msa1390230 | 0.818109 | 2.326451e-52 | -8.615850e-47 |
| Msa0267760 | Msa1390230 | 0.821755 | 3.410708e-53 | -8.615850e-47 |
| Msa0267870 | Msa1390230 | 0.806305 | 8.773958e-50 | -8.615850e-47 |
| Msa0275400 | Msa1390230 | -0.816100 | 6.580906e-52 | -8.615850e-47 |
| Msa0276920 | Msa1390230 | 0.809352 | 1.973916e-50 | -8.615850e-47 |
| Msa0287310 | Msa1390230 | 0.804707 | 1.898458e-49 | -8.615850e-47 |
| Msa0288730 | Msa1390230 | 0.817396 | 3.370933e-52 | -8.615850e-47 |
| Msa0291520 | Msa1390230 | 0.831220 | 1.889079e-55 | -8.615850e-47 |
| Msa0308550 | Msa1390230 | 0.811098 | 8.297385e-51 | -8.615850e-47 |
| Msa0315240 | Msa1390230 | 0.831115 | 2.004630e-55 | -8.615850e-47 |
| Msa0318720 | Msa1390230 | 0.836019 | 1.195802e-56 | -8.615850e-47 |
| Msa0325850 | Msa1390230 | 0.802865 | 4.579741e-49 | -8.615850e-47 |
| Msa0334040 | Msa1390230 | 0.805656 | 1.201412e-49 | -8.615850e-47 |
| Msa0335040 | Msa1390230 | 0.801766 | 7.713438e-49 | -8.615850e-47 |
| Msa0355270 | Msa1390230 | 0.811694 | 6.159285e-51 | -8.615850e-47 |
| Msa1124310 | Msa1390230 | 0.806728 | 7.143538e-50 | -8.615850e-47 |
| Msa1125470 | Msa1390230 | 0.831325 | 1.779594e-55 | -8.615850e-47 |
| Msa1125550 | Msa1390230 | 0.837913 | 3.926087e-57 | -8.615850e-47 |
| Msa1127130 | Msa1390230 | 0.820284 | 7.440587e-53 | -8.615850e-47 |
| Msa1127830 | Msa1390230 | 0.846606 | 1.953762e-59 | -8.615850e-47 |
| Msa1130210 | Msa1390230 | -0.800200 | 1.611468e-48 | -8.615850e-47 |
| Msa1160360 | Msa1390230 | 0.810923 | 9.053072e-51 | -8.615850e-47 |
| Msa1166410 | Msa1390230 | 0.830351 | 3.083267e-55 | -8.615850e-47 |
| Msa1174100 | Msa1390230 | 0.817789 | 2.748531e-52 | -8.615850e-47 |
| Msa1178050 | Msa1390230 | 0.804961 | 1.680264e-49 | -8.615850e-47 |
| Msa1181170 | Msa1390230 | -0.817563 | 3.089982e-52 | -8.615850e-47 |
| Msa1185540 | Msa1390230 | 0.813031 | 3.144220e-51 | -8.615850e-47 |
| Msa1198880 | Msa1390230 | 0.822395 | 2.424076e-53 | -8.615850e-47 |
| Msa1201830 | Msa1390230 | 0.813609 | 2.347144e-51 | -8.615850e-47 |
| Msa1207730 | Msa1390230 | 0.826134 | 3.205102e-54 | -8.615850e-47 |
| Msa0505150 | Msa1390230 | 0.806879 | 6.637000e-50 | -8.615850e-47 |
| Msa0506890 | Msa1390230 | 0.900471 | 7.088156e-78 | -8.615850e-47 |
| Msa0506940 | Msa1390230 | 0.919190 | 6.130478e-87 | -8.615850e-47 |
| Msa0513440 | Msa1390230 | 0.847978 | 8.214287e-60 | -8.615850e-47 |
| Msa0514180 | Msa1390230 | 0.800626 | 1.319407e-48 | -8.615850e-47 |
| Msa0517490 | Msa1390230 | 0.843243 | 1.579415e-58 | -8.615850e-47 |
| Msa0521880 | Msa1390230 | 0.829484 | 5.015919e-55 | -8.615850e-47 |
| Msa0526710 | Msa1390230 | 0.818200 | 2.218690e-52 | -8.615850e-47 |
| Msa0526890 | Msa1390230 | 0.839951 | 1.165148e-57 | -8.615850e-47 |
| Msa0535030 | Msa1390230 | 0.802022 | 6.833371e-49 | -8.615850e-47 |
| Msa0535060 | Msa1390230 | 0.800267 | 1.561756e-48 | -8.615850e-47 |
| Msa0542160 | Msa1390230 | 0.860061 | 2.684844e-63 | -8.615850e-47 |
| Msa0545060 | Msa1390230 | 0.855867 | 4.729019e-62 | -8.615850e-47 |
| Msa0546360 | Msa1390230 | 0.803645 | 3.157296e-49 | -8.615850e-47 |
| Msa0547400 | Msa1390230 | 0.816575 | 5.153431e-52 | -8.615850e-47 |
| Msa0576980 | Msa1390230 | 0.802078 | 6.653689e-49 | -8.615850e-47 |
| Msa0577220 | Msa1390230 | 0.804762 | 1.848563e-49 | -8.615850e-47 |
| Msa0578090 | Msa1390230 | 0.841740 | 3.955195e-58 | -8.615850e-47 |
| Msa0586850 | Msa1390230 | 0.827124 | 1.859963e-54 | -8.615850e-47 |
| Msa0600600 | Msa1390230 | 0.806802 | 6.891094e-50 | -8.615850e-47 |
| Msa0600610 | Msa1390230 | 0.803554 | 3.297592e-49 | -8.615850e-47 |
| Msa0602120 | Msa1390230 | 0.815288 | 9.984318e-52 | -8.615850e-47 |
| Msa0844230 | Msa1390230 | 0.801748 | 7.778154e-49 | -8.615850e-47 |
| Msa0850710 | Msa1390230 | 0.821234 | 4.500004e-53 | -8.615850e-47 |
| Msa0850960 | Msa1390230 | 0.803583 | 3.252343e-49 | -8.615850e-47 |
| Msa0851470 | Msa1390230 | 0.827072 | 1.914406e-54 | -8.615850e-47 |
| Msa0863370 | Msa1390230 | 0.813938 | 1.986544e-51 | -8.615850e-47 |
| Msa0863800 | Msa1390230 | 0.847960 | 8.305369e-60 | -8.615850e-47 |
| Msa0881030 | Msa1390230 | 0.801565 | 8.481585e-49 | -8.615850e-47 |
| Msa0881580 | Msa1390230 | 0.811062 | 8.445565e-51 | -8.615850e-47 |
| Msa0896290 | Msa1390230 | 0.803562 | 3.285821e-49 | -8.615850e-47 |
| Msa0908170 | Msa1390230 | 0.827476 | 1.532008e-54 | -8.615850e-47 |
| Msa0933440 | Msa1390230 | 0.862699 | 4.210479e-64 | -8.615850e-47 |
| Msa0940830 | Msa1390230 | 0.803613 | 3.206826e-49 | -8.615850e-47 |
| Msa0959010 | Msa1390230 | 0.802115 | 6.539425e-49 | -8.615850e-47 |
| Msa0976330 | Msa1390230 | 0.800784 | 1.225379e-48 | -8.615850e-47 |
| Msa0977310 | Msa1390230 | 0.816003 | 6.916860e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390230 | MtrunA17_Chr3g0110281 | 99.487 | 195 | 1 | 0 | 1 | 195 | 23 | 217 | 1.74e-142 | 395 |
| Msa1390230 | MtrunA17_Chr5g0434521 | 70.984 | 193 | 52 | 2 | 1 | 191 | 1 | 191 | 3.64e-96 | 277 |
| Msa1390230 | MtrunA17_Chr1g0161131 | 66.871 | 163 | 51 | 2 | 10 | 171 | 1 | 161 | 3.42e-74 | 221 |
| Msa1390230 | MtrunA17_Chr8g0391621 | 63.804 | 163 | 56 | 2 | 10 | 171 | 1 | 161 | 2.59e-71 | 213 |
| Msa1390230 | MtrunA17_Chr6g0479111 | 62.500 | 160 | 55 | 3 | 8 | 166 | 70 | 225 | 4.92e-67 | 205 |
| Msa1390230 | MtrunA17_Chr8g0353331 | 51.250 | 160 | 67 | 3 | 13 | 164 | 4 | 160 | 2.17e-48 | 155 |
| Msa1390230 | MtrunA17_Chr7g0252391 | 45.614 | 171 | 84 | 4 | 15 | 177 | 6 | 175 | 4.77e-39 | 133 |
| Msa1390230 | MtrunA17_Chr1g0189471 | 51.562 | 64 | 26 | 2 | 13 | 74 | 4 | 64 | 8.80e-15 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390230 | AT1G14860.1 | 68.987 | 158 | 47 | 1 | 10 | 167 | 1 | 156 | 2.58e-75 | 224 |
| Msa1390230 | AT2G01670.1 | 65.625 | 160 | 53 | 1 | 8 | 167 | 4 | 161 | 8.19e-74 | 221 |
| Msa1390230 | AT1G18300.1 | 64.151 | 159 | 55 | 2 | 8 | 165 | 38 | 195 | 2.77e-71 | 215 |
| Msa1390230 | AT1G73540.1 | 60.870 | 161 | 55 | 3 | 8 | 166 | 39 | 193 | 5.89e-65 | 199 |
| Msa1390230 | AT3G26690.1 | 46.629 | 178 | 81 | 5 | 12 | 177 | 3 | 178 | 5.76e-45 | 148 |
| Msa1390230 | AT3G26690.2 | 46.629 | 178 | 81 | 5 | 12 | 177 | 3 | 178 | 5.76e-45 | 148 |
| Msa1390230 | AT1G12880.1 | 47.879 | 165 | 73 | 4 | 12 | 164 | 3 | 166 | 2.43e-42 | 141 |
| Msa1390230 | AT3G12600.1 | 50.000 | 158 | 72 | 2 | 10 | 160 | 1 | 158 | 9.23e-40 | 134 |
| Msa1390230 | AT3G12600.2 | 50.000 | 146 | 66 | 2 | 22 | 160 | 4 | 149 | 5.58e-36 | 124 |
Find 66 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGAAACAGAGAGTTTA+AGG | 0.153308 | tig0021332:-106344 | None:intergenic |
| TTGCTTGGTGCAGGGTAAAT+TGG | 0.178727 | tig0021332:+107710 | Msa1390230:intron |
| GCATCTCCAATGCAATTTAA+AGG | 0.206014 | tig0021332:-108291 | None:intergenic |
| ATAAGTTCTGTTCCCTTTAC+TGG | 0.208033 | tig0021332:+108817 | Msa1390230:three_prime_UTR |
| TTATATATACTATCATAATT+TGG | 0.216114 | tig0021332:-108417 | None:intergenic |
| AAAACTTCTTGAAGTCAATT+AGG | 0.266342 | tig0021332:+108630 | Msa1390230:three_prime_UTR |
| TCTACTTGTTCAAGAGGAAT+TGG | 0.306076 | tig0021332:+107791 | Msa1390230:CDS |
| CTTTACAAAACACACAATAA+TGG | 0.312157 | tig0021332:+106368 | Msa1390230:exon |
| TGCAGGGTAAATTGGGTAAA+TGG | 0.319017 | tig0021332:+107718 | Msa1390230:intron |
| TTCAAGAGGAATTGGAGTTC+TGG | 0.326630 | tig0021332:+107799 | Msa1390230:CDS |
| AGACTAGTAAACCGTCTATT+AGG | 0.334244 | tig0021332:+108234 | Msa1390230:CDS |
| ATTGGATGTTTCAGATGAAT+TGG | 0.336799 | tig0021332:+106953 | Msa1390230:CDS |
| CATAATTTGGCTCAATTCAA+TGG | 0.340109 | tig0021332:-108404 | None:intergenic |
| ACACACAATAATGGTTGCTT+TGG | 0.348822 | tig0021332:+106377 | Msa1390230:exon |
| TACCATACAGATATAAGATT+GGG | 0.391619 | tig0021332:+106919 | Msa1390230:CDS |
| TGTGATGTGATTATCATTTG+TGG | 0.395872 | tig0021332:+108791 | Msa1390230:three_prime_UTR |
| ATATATATTAAATGTATTCA+TGG | 0.401816 | tig0021332:+108585 | Msa1390230:three_prime_UTR |
| TGCTTGGTGCAGGGTAAATT+GGG | 0.401857 | tig0021332:+107711 | Msa1390230:intron |
| GTCACATTGGTTTCTCGTAC+TGG | 0.402078 | tig0021332:+106417 | Msa1390230:CDS |
| TCCCCAATCTTATATCTGTA+TGG | 0.410177 | tig0021332:-106921 | None:intergenic |
| ATTATGTTCTTAAAACTACT+TGG | 0.415061 | tig0021332:-108893 | None:intergenic |
| CTGGTGGATGAAAGAGGCTT+TGG | 0.431939 | tig0021332:+108209 | Msa1390230:CDS |
| TACTAAATAACAGGGAGGTT+GGG | 0.434579 | tig0021332:+107107 | Msa1390230:intron |
| AAAGGTCGTCGTCAAGTTGT+TGG | 0.437350 | tig0021332:+106462 | Msa1390230:CDS |
| TCTAATATGAAGAAGGGATA+AGG | 0.443747 | tig0021332:+108742 | Msa1390230:three_prime_UTR |
| AAAACCTTCGTCAAAGAAGA+TGG | 0.452927 | tig0021332:+107829 | Msa1390230:CDS |
| CAAAACTTCATCTCCAGTAA+AGG | 0.455325 | tig0021332:-108830 | None:intergenic |
| AAAACTTCATCTCCAGTAAA+GGG | 0.456071 | tig0021332:-108829 | None:intergenic |
| ACATATGATACTTTATATGA+TGG | 0.457732 | tig0021332:+107756 | Msa1390230:CDS |
| CTACGTCCTTTAAATTGCAT+TGG | 0.459826 | tig0021332:+108285 | Msa1390230:CDS |
| AGGTTGAGGAGAAGAATAGT+AGG | 0.461776 | tig0021332:+108379 | Msa1390230:three_prime_UTR |
| ACATCACACAATACAATAAG+TGG | 0.462429 | tig0021332:-108776 | None:intergenic |
| TTACTAAATAACAGGGAGGT+TGG | 0.462917 | tig0021332:+107106 | Msa1390230:intron |
| TAACCTCTCTAATATGAAGA+AGG | 0.464022 | tig0021332:+108735 | Msa1390230:three_prime_UTR |
| AAGGTCGTCGTCAAGTTGTT+GGG | 0.471306 | tig0021332:+106463 | Msa1390230:CDS |
| ATACCATACAGATATAAGAT+TGG | 0.489360 | tig0021332:+106918 | Msa1390230:CDS |
| GGAATTAGATGAATCTCAAA+AGG | 0.489420 | tig0021332:+107128 | Msa1390230:CDS |
| TTGTTATAAGTTCTCAGAAA+GGG | 0.490101 | tig0021332:+106982 | Msa1390230:CDS |
| TTGTTAAAAGTGTAATTTCG+TGG | 0.512493 | tig0021332:+108324 | Msa1390230:exon |
| TCAAGAAAATGTTGTCACAT+TGG | 0.512517 | tig0021332:+106404 | Msa1390230:CDS |
| CTTGTTATAAGTTCTCAGAA+AGG | 0.514027 | tig0021332:+106981 | Msa1390230:CDS |
| TCAACACTGGTGGATGAAAG+AGG | 0.518367 | tig0021332:+108203 | Msa1390230:CDS |
| TATATATTAAATGTATTCAT+GGG | 0.519572 | tig0021332:+108586 | Msa1390230:three_prime_UTR |
| GAGTTACAACGTTATAGAAA+AGG | 0.522985 | tig0021332:+106444 | Msa1390230:CDS |
| TTACCCATCTTCTTTGACGA+AGG | 0.524824 | tig0021332:-107833 | None:intergenic |
| ATAAGTTCTCAGAAAGGGAA+AGG | 0.542940 | tig0021332:+106987 | Msa1390230:CDS |
| GTTTCCTCTACTTGTTCAAG+AGG | 0.548107 | tig0021332:+107785 | Msa1390230:CDS |
| AGAGAAACCATGGAGGAAGC+TGG | 0.548494 | tig0021332:+107162 | Msa1390230:CDS |
| TCGTACACCAGCTTCCTCCA+TGG | 0.562948 | tig0021332:-107169 | None:intergenic |
| GGCAGCTTTGAGAGAAACCA+TGG | 0.565133 | tig0021332:+107152 | Msa1390230:CDS |
| TAAAAGTGTAATTTCGTGGA+GGG | 0.569228 | tig0021332:+108328 | Msa1390230:exon |
| TAAGTTCTCAGAAAGGGAAA+GGG | 0.569652 | tig0021332:+106988 | Msa1390230:CDS |
| ATCCCTTCTTCATATTAGAG+AGG | 0.571358 | tig0021332:-108738 | None:intergenic |
| AATTCCTCTTGAACAAGTAG+AGG | 0.573287 | tig0021332:-107789 | None:intergenic |
| AAACCTTCGTCAAAGAAGAT+GGG | 0.587211 | tig0021332:+107830 | Msa1390230:CDS |
| CAAGAGATGTTTGTCAACAC+TGG | 0.594375 | tig0021332:+108190 | Msa1390230:CDS |
| GAAAGGGATGCTATTTCCAA+AGG | 0.599650 | tig0021332:+107004 | Msa1390230:CDS |
| AACCTCTCTAATATGAAGAA+GGG | 0.605647 | tig0021332:+108736 | Msa1390230:three_prime_UTR |
| ATTAGATGAATCTCAAAAGG+AGG | 0.619969 | tig0021332:+107131 | Msa1390230:CDS |
| TTAAAAGTGTAATTTCGTGG+AGG | 0.620018 | tig0021332:+108327 | Msa1390230:exon |
| ATGGAGGAAGCTGGTGTACG+AGG | 0.648306 | tig0021332:+107171 | Msa1390230:CDS |
| GATTTGTGCTAATGTAAGAG+AGG | 0.649109 | tig0021332:+108687 | Msa1390230:three_prime_UTR |
| ACCATACAGATATAAGATTG+GGG | 0.668226 | tig0021332:+106920 | Msa1390230:CDS |
| GAGATGTTTGTCAACACTGG+TGG | 0.687529 | tig0021332:+108193 | Msa1390230:CDS |
| TGGTGTACGAGGCATTGTTG+AGG | 0.717499 | tig0021332:+107182 | Msa1390230:CDS |
| AGCTTTGAGAGAAACCATGG+AGG | 0.776762 | tig0021332:+107155 | Msa1390230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTATAAATAACATAA+TGG | - | tig0021332:107080-107099 | None:intergenic | 10.0% |
| !! | TATATATATATATTAAAGTC+TGG | - | tig0021332:107920-107939 | None:intergenic | 10.0% |
| !! | TTATATATACTATCATAATT+TGG | - | tig0021332:108420-108439 | None:intergenic | 10.0% |
| !! | ATATATATTAAATGTATTCA+TGG | + | tig0021332:108585-108604 | Msa1390230:three_prime_UTR | 10.0% |
| !! | TATATATTAAATGTATTCAT+GGG | + | tig0021332:108586-108605 | Msa1390230:three_prime_UTR | 10.0% |
| !!! | AAAAAAATACTATTGGTTAA+TGG | + | tig0021332:106679-106698 | Msa1390230:intron | 15.0% |
| !!! | AAAAAATACTATTGGTTAAT+GGG | + | tig0021332:106680-106699 | Msa1390230:intron | 15.0% |
| !!! | GATAATTCTCTAAAAATAAT+TGG | + | tig0021332:107666-107685 | Msa1390230:intron | 15.0% |
| !! | TAAAAATATTACAGACTAAA+TGG | + | tig0021332:107974-107993 | Msa1390230:intron | 15.0% |
| !! | CTAAAAGAATATATTATACT+AGG | - | tig0021332:108030-108049 | None:intergenic | 15.0% |
| !!! | CTAGTATAATATATTCTTTT+AGG | + | tig0021332:108028-108047 | Msa1390230:intron | 15.0% |
| !!! | TATTCTTTTAGGAATTAAAT+TGG | + | tig0021332:108039-108058 | Msa1390230:intron | 15.0% |
| !!! | TTGTTATTAATTTTCTGAAA+GGG | + | tig0021332:108108-108127 | Msa1390230:intron | 15.0% |
| !! | ATAATACTGCTAAATTATCA+CGG | + | tig0021332:106644-106663 | Msa1390230:intron | 20.0% |
| !! | CACTGATAAAAAAATACTAT+TGG | + | tig0021332:106672-106691 | Msa1390230:intron | 20.0% |
| !!! | TAATTTTGTGTTTACAATCA+TGG | + | tig0021332:106883-106902 | Msa1390230:intron | 20.0% |
| !! | AACTAATATCTATATACCTT+TGG | - | tig0021332:107023-107042 | None:intergenic | 20.0% |
| !!! | TTACGATATCTAGAATAAAT+TGG | - | tig0021332:107267-107286 | None:intergenic | 20.0% |
| !! | ACATATGATACTTTATATGA+TGG | + | tig0021332:107756-107775 | Msa1390230:CDS | 20.0% |
| !!! | TTTTATAGTTACAACTTACA+CGG | - | tig0021332:107959-107978 | None:intergenic | 20.0% |
| !! | TAATTTAGTGACTAAATTGA+CGG | + | tig0021332:108076-108095 | Msa1390230:intron | 20.0% |
| !!! | GTTGTTATTAATTTTCTGAA+AGG | + | tig0021332:108107-108126 | Msa1390230:intron | 20.0% |
| !!! | TTGTTTGAAACTTTCTATTT+TGG | + | tig0021332:108142-108161 | Msa1390230:intron | 20.0% |
| !!! | TGTTTGAAACTTTCTATTTT+GGG | + | tig0021332:108143-108162 | Msa1390230:intron | 20.0% |
| ! | ATAATGAAACAGAGAGTTTA+AGG | - | tig0021332:106347-106366 | None:intergenic | 25.0% |
| ! | CTTTACAAAACACACAATAA+TGG | + | tig0021332:106368-106387 | Msa1390230:exon | 25.0% |
| ! | AAAAATTGTGACTTTCATTG+TGG | + | tig0021332:106564-106583 | Msa1390230:intron | 25.0% |
| ! | AAAATTGTGACTTTCATTGT+GGG | + | tig0021332:106565-106584 | Msa1390230:intron | 25.0% |
| !!! | AATTTTAAAGATGCACTACT+TGG | + | tig0021332:106810-106829 | Msa1390230:intron | 25.0% |
| ! | TCTATTGAATTTGACATCAA+TGG | + | tig0021332:106854-106873 | Msa1390230:intron | 25.0% |
| ! | ATACCATACAGATATAAGAT+TGG | + | tig0021332:106918-106937 | Msa1390230:CDS | 25.0% |
| ! | TACCATACAGATATAAGATT+GGG | + | tig0021332:106919-106938 | Msa1390230:CDS | 25.0% |
| ! | TTGTTATAAGTTCTCAGAAA+GGG | + | tig0021332:106982-107001 | Msa1390230:CDS | 25.0% |
| ! | TGTATTGCTTACTAAATAAC+AGG | + | tig0021332:107098-107117 | Msa1390230:intron | 25.0% |
| ! | GTATTGCTTACTAAATAACA+GGG | + | tig0021332:107099-107118 | Msa1390230:intron | 25.0% |
| ! | ATTCTAGATATCGTAAGTAT+CGG | + | tig0021332:107271-107290 | Msa1390230:intron | 25.0% |
| !!! | ATGAATTGTTTTGAAGAACT+CGG | + | tig0021332:107352-107371 | Msa1390230:intron | 25.0% |
| ! | AATAATAGAGTTCGTACAAA+AGG | - | tig0021332:107419-107438 | None:intergenic | 25.0% |
| !! | GAAGAATCCTACAATTTTAA+AGG | + | tig0021332:107636-107655 | Msa1390230:intron | 25.0% |
| !!! | CATTTAGCCTTTAAAATTGT+AGG | - | tig0021332:107646-107665 | None:intergenic | 25.0% |
| !!! | CTACAATTTTAAAGGCTAAA+TGG | + | tig0021332:107644-107663 | Msa1390230:intron | 25.0% |
| !! | TCTCTAAAAATAATTGGCTT+TGG | + | tig0021332:107672-107691 | Msa1390230:intron | 25.0% |
| ! | ATACTAATGTTACTATTGCT+TGG | + | tig0021332:107695-107714 | Msa1390230:intron | 25.0% |
| ! | AATATTACAGACTAAATGGA+TGG | + | tig0021332:107978-107997 | Msa1390230:intron | 25.0% |
| !!! | GGATGGATTTTATATACTTA+AGG | + | tig0021332:107995-108014 | Msa1390230:intron | 25.0% |
| ! | ATATATTATACTAGGACACA+TGG | - | tig0021332:108022-108041 | None:intergenic | 25.0% |
| !!! | GTTTGAAACTTTCTATTTTG+GGG | + | tig0021332:108144-108163 | Msa1390230:intron | 25.0% |
| !! | TTGTTAAAAGTGTAATTTCG+TGG | + | tig0021332:108324-108343 | Msa1390230:exon | 25.0% |
| !!! | AATTTTTTTTGTGTTGCTTG+AGG | + | tig0021332:108359-108378 | Msa1390230:three_prime_UTR | 25.0% |
| !!! | TTTTTTCTCATCTTATGATG+AGG | + | tig0021332:108542-108561 | Msa1390230:three_prime_UTR | 25.0% |
| !! | TGAGGATTAATTTTCAATTG+TGG | + | tig0021332:108560-108579 | Msa1390230:three_prime_UTR | 25.0% |
| ! | AAAACTTCTTGAAGTCAATT+AGG | + | tig0021332:108630-108649 | Msa1390230:three_prime_UTR | 25.0% |
| TCAAGAAAATGTTGTCACAT+TGG | + | tig0021332:106404-106423 | Msa1390230:CDS | 30.0% | |
| GAGTTACAACGTTATAGAAA+AGG | + | tig0021332:106444-106463 | Msa1390230:CDS | 30.0% | |
| AAATTGTGACTTTCATTGTG+GGG | + | tig0021332:106566-106585 | Msa1390230:intron | 30.0% | |
| !! | GACCACTTTTGATAATTTTG+AGG | + | tig0021332:106613-106632 | Msa1390230:intron | 30.0% |
| CACCTCAAAATTATCAAAAG+TGG | - | tig0021332:106618-106637 | None:intergenic | 30.0% | |
| ACCATACAGATATAAGATTG+GGG | + | tig0021332:106920-106939 | Msa1390230:CDS | 30.0% | |
| ATTGGATGTTTCAGATGAAT+TGG | + | tig0021332:106953-106972 | Msa1390230:CDS | 30.0% | |
| ! | CTTGTTATAAGTTCTCAGAA+AGG | + | tig0021332:106981-107000 | Msa1390230:CDS | 30.0% |
| GGAATTAGATGAATCTCAAA+AGG | + | tig0021332:107128-107147 | Msa1390230:CDS | 30.0% | |
| ATTAGATGAATCTCAAAAGG+AGG | + | tig0021332:107131-107150 | Msa1390230:CDS | 30.0% | |
| !!! | TGAATTGTTTTGAAGAACTC+GGG | + | tig0021332:107353-107372 | Msa1390230:intron | 30.0% |
| !!! | ATGAGAGCATTAATGCTTTT+TGG | + | tig0021332:107502-107521 | Msa1390230:intron | 30.0% |
| TTCAGCAACTAAAATTGTCT+TGG | + | tig0021332:107532-107551 | Msa1390230:intron | 30.0% | |
| CTTCAATTTAGCTATAACAG+TGG | - | tig0021332:107620-107639 | None:intergenic | 30.0% | |
| ! | CAAGTTTTTGACCTAATAGA+CGG | - | tig0021332:108248-108267 | None:intergenic | 30.0% |
| ! | CACTTTTAACAAGTCAGATT+TGG | - | tig0021332:108316-108335 | None:intergenic | 30.0% |
| ! | TTAAAAGTGTAATTTCGTGG+AGG | + | tig0021332:108327-108346 | Msa1390230:exon | 30.0% |
| ! | TAAAAGTGTAATTTCGTGGA+GGG | + | tig0021332:108328-108347 | Msa1390230:exon | 30.0% |
| ! | CATAATTTGGCTCAATTCAA+TGG | - | tig0021332:108407-108426 | None:intergenic | 30.0% |
| TAACCTCTCTAATATGAAGA+AGG | + | tig0021332:108735-108754 | Msa1390230:three_prime_UTR | 30.0% | |
| AACCTCTCTAATATGAAGAA+GGG | + | tig0021332:108736-108755 | Msa1390230:three_prime_UTR | 30.0% | |
| TCTAATATGAAGAAGGGATA+AGG | + | tig0021332:108742-108761 | Msa1390230:three_prime_UTR | 30.0% | |
| ACATCACACAATACAATAAG+TGG | - | tig0021332:108779-108798 | None:intergenic | 30.0% | |
| TGTGATGTGATTATCATTTG+TGG | + | tig0021332:108791-108810 | Msa1390230:three_prime_UTR | 30.0% | |
| AAAACTTCATCTCCAGTAAA+GGG | - | tig0021332:108832-108851 | None:intergenic | 30.0% | |
| !!! | GAATGAGAGTTTTGTTTGAG+TGG | - | tig0021332:106317-106336 | None:intergenic | 35.0% |
| ACACACAATAATGGTTGCTT+TGG | + | tig0021332:106377-106396 | Msa1390230:exon | 35.0% | |
| CCAGTATCAGAAATGAAAAG+GGG | - | tig0021332:106503-106522 | None:intergenic | 35.0% | |
| CCCAGTATCAGAAATGAAAA+GGG | - | tig0021332:106504-106523 | None:intergenic | 35.0% | |
| ! | CCCTTTTCATTTCTGATACT+GGG | + | tig0021332:106501-106520 | Msa1390230:intron | 35.0% |
| ACCCAGTATCAGAAATGAAA+AGG | - | tig0021332:106505-106524 | None:intergenic | 35.0% | |
| ! | CTCAGAGTTTTACAGAATCA+CGG | + | tig0021332:106713-106732 | Msa1390230:intron | 35.0% |
| ! | ACGTGATTTTGTCAAACTCA+CGG | + | tig0021332:106785-106804 | Msa1390230:intron | 35.0% |
| TCCCCAATCTTATATCTGTA+TGG | - | tig0021332:106924-106943 | None:intergenic | 35.0% | |
| GATTGGGGAGAAAAATTCAT+TGG | + | tig0021332:106935-106954 | Msa1390230:CDS | 35.0% | |
| ATAAGTTCTCAGAAAGGGAA+AGG | + | tig0021332:106987-107006 | Msa1390230:CDS | 35.0% | |
| TAAGTTCTCAGAAAGGGAAA+GGG | + | tig0021332:106988-107007 | Msa1390230:CDS | 35.0% | |
| TTGCTTACTAAATAACAGGG+AGG | + | tig0021332:107102-107121 | Msa1390230:intron | 35.0% | |
| TTACTAAATAACAGGGAGGT+TGG | + | tig0021332:107106-107125 | Msa1390230:intron | 35.0% | |
| TACTAAATAACAGGGAGGTT+GGG | + | tig0021332:107107-107126 | Msa1390230:intron | 35.0% | |
| !!! | ACCAAATTGTCTTGTTTTCG+CGG | - | tig0021332:107452-107471 | None:intergenic | 35.0% |
| AGCAACTAAAATTGTCTTGG+TGG | + | tig0021332:107535-107554 | Msa1390230:intron | 35.0% | |
| AATTCCTCTTGAACAAGTAG+AGG | - | tig0021332:107792-107811 | None:intergenic | 35.0% | |
| TCTACTTGTTCAAGAGGAAT+TGG | + | tig0021332:107791-107810 | Msa1390230:CDS | 35.0% | |
| AAAACCTTCGTCAAAGAAGA+TGG | + | tig0021332:107829-107848 | Msa1390230:CDS | 35.0% | |
| AAACCTTCGTCAAAGAAGAT+GGG | + | tig0021332:107830-107849 | Msa1390230:CDS | 35.0% | |
| AGACTAGTAAACCGTCTATT+AGG | + | tig0021332:108234-108253 | Msa1390230:CDS | 35.0% | |
| CGTCTATTAGGTCAAAAACT+TGG | + | tig0021332:108246-108265 | Msa1390230:CDS | 35.0% | |
| CTACGTCCTTTAAATTGCAT+TGG | + | tig0021332:108285-108304 | Msa1390230:CDS | 35.0% | |
| GCATCTCCAATGCAATTTAA+AGG | - | tig0021332:108294-108313 | None:intergenic | 35.0% | |
| GATTTGTGCTAATGTAAGAG+AGG | + | tig0021332:108687-108706 | Msa1390230:three_prime_UTR | 35.0% | |
| ATCCCTTCTTCATATTAGAG+AGG | - | tig0021332:108741-108760 | None:intergenic | 35.0% | |
| ATAAGTTCTGTTCCCTTTAC+TGG | + | tig0021332:108817-108836 | Msa1390230:three_prime_UTR | 35.0% | |
| CAAAACTTCATCTCCAGTAA+AGG | - | tig0021332:108833-108852 | None:intergenic | 35.0% | |
| ! | CCCCTTTTCATTTCTGATAC+TGG | + | tig0021332:106500-106519 | Msa1390230:intron | 40.0% |
| ! | TGACTTTCATTGTGGGGTTT+TGG | + | tig0021332:106572-106591 | Msa1390230:intron | 40.0% |
| ! | CGTGATTTTGTCAAACTCAC+GGG | + | tig0021332:106786-106805 | Msa1390230:intron | 40.0% |
| !! | GAAAGGGATGCTATTTCCAA+AGG | + | tig0021332:107004-107023 | Msa1390230:CDS | 40.0% |
| !!! | TGTTTTGAAGAACTCGGGTT+CGG | + | tig0021332:107358-107377 | Msa1390230:intron | 40.0% |
| TCCGCGAAAACAAGACAATT+TGG | + | tig0021332:107448-107467 | Msa1390230:intron | 40.0% | |
| ! | GGTGGAACTAATGTTACTTG+AGG | + | tig0021332:107553-107572 | Msa1390230:intron | 40.0% |
| !! | ATGTTACTATTGCTTGGTGC+AGG | + | tig0021332:107701-107720 | Msa1390230:intron | 40.0% |
| !! | TGTTACTATTGCTTGGTGCA+GGG | + | tig0021332:107702-107721 | Msa1390230:intron | 40.0% |
| TGCAGGGTAAATTGGGTAAA+TGG | + | tig0021332:107718-107737 | Msa1390230:intron | 40.0% | |
| GTTTCCTCTACTTGTTCAAG+AGG | + | tig0021332:107785-107804 | Msa1390230:CDS | 40.0% | |
| TTCAAGAGGAATTGGAGTTC+TGG | + | tig0021332:107799-107818 | Msa1390230:CDS | 40.0% | |
| !!! | CTTTGACGAAGGTTTTGTTC+AGG | - | tig0021332:107825-107844 | None:intergenic | 40.0% |
| TTACCCATCTTCTTTGACGA+AGG | - | tig0021332:107836-107855 | None:intergenic | 40.0% | |
| CAAGAGATGTTTGTCAACAC+TGG | + | tig0021332:108190-108209 | Msa1390230:CDS | 40.0% | |
| !!! | TTTTGTGTTGCTTGAGGTTG+AGG | + | tig0021332:108365-108384 | Msa1390230:three_prime_UTR | 40.0% |
| AGGTTGAGGAGAAGAATAGT+AGG | + | tig0021332:108379-108398 | Msa1390230:three_prime_UTR | 40.0% | |
| !! | GTCACATTGGTTTCTCGTAC+TGG | + | tig0021332:106417-106436 | Msa1390230:CDS | 45.0% |
| ! | AAAGGTCGTCGTCAAGTTGT+TGG | + | tig0021332:106462-106481 | Msa1390230:CDS | 45.0% |
| ! | AAGGTCGTCGTCAAGTTGTT+GGG | + | tig0021332:106463-106482 | Msa1390230:CDS | 45.0% |
| !! | AGCTTTGAGAGAAACCATGG+AGG | + | tig0021332:107155-107174 | Msa1390230:CDS | 45.0% |
| !! | TTGCTTGGTGCAGGGTAAAT+TGG | + | tig0021332:107710-107729 | Msa1390230:intron | 45.0% |
| !! | TGCTTGGTGCAGGGTAAATT+GGG | + | tig0021332:107711-107730 | Msa1390230:intron | 45.0% |
| GAGATGTTTGTCAACACTGG+TGG | + | tig0021332:108193-108212 | Msa1390230:CDS | 45.0% | |
| ! | TCAACACTGGTGGATGAAAG+AGG | + | tig0021332:108203-108222 | Msa1390230:CDS | 45.0% |
| !!! | ATTTTTTTTCAAAAAAAAAA+TGG | - | tig0021332:106550-106569 | None:intergenic | 5.0% |
| !!! | AAATAAAGTATTTTTTTTTA+GGG | - | tig0021332:108493-108512 | None:intergenic | 5.0% |
| !!! | AAAATAAAGTATTTTTTTTT+AGG | - | tig0021332:108494-108513 | None:intergenic | 5.0% |
| !! | GGCAGCTTTGAGAGAAACCA+TGG | + | tig0021332:107152-107171 | Msa1390230:CDS | 50.0% |
| AGAGAAACCATGGAGGAAGC+TGG | + | tig0021332:107162-107181 | Msa1390230:CDS | 50.0% | |
| !! | TGGTGTACGAGGCATTGTTG+AGG | + | tig0021332:107182-107201 | Msa1390230:CDS | 50.0% |
| ! | CTGGTGGATGAAAGAGGCTT+TGG | + | tig0021332:108209-108228 | Msa1390230:CDS | 50.0% |
| TCGTACACCAGCTTCCTCCA+TGG | - | tig0021332:107172-107191 | None:intergenic | 55.0% | |
| ATGGAGGAAGCTGGTGTACG+AGG | + | tig0021332:107171-107190 | Msa1390230:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021332 | gene | 106306 | 108907 | 106306 | ID=Msa1390230;Name=Msa1390230 |
| tig0021332 | mRNA | 106306 | 108907 | 106306 | ID=Msa1390230-mRNA-1;Parent=Msa1390230;Name=Msa1390230-mRNA-1;_AED=0.12;_eAED=0.12;_QI=81|1|1|1|1|1|5|569|195 |
| tig0021332 | exon | 106306 | 106484 | 106306 | ID=Msa1390230-mRNA-1:exon:12042;Parent=Msa1390230-mRNA-1 |
| tig0021332 | exon | 106914 | 107025 | 106914 | ID=Msa1390230-mRNA-1:exon:12043;Parent=Msa1390230-mRNA-1 |
| tig0021332 | exon | 107120 | 107203 | 107120 | ID=Msa1390230-mRNA-1:exon:12044;Parent=Msa1390230-mRNA-1 |
| tig0021332 | exon | 107723 | 107851 | 107723 | ID=Msa1390230-mRNA-1:exon:12045;Parent=Msa1390230-mRNA-1 |
| tig0021332 | exon | 108174 | 108907 | 108174 | ID=Msa1390230-mRNA-1:exon:12046;Parent=Msa1390230-mRNA-1 |
| tig0021332 | five_prime_UTR | 106306 | 106386 | 106306 | ID=Msa1390230-mRNA-1:five_prime_utr;Parent=Msa1390230-mRNA-1 |
| tig0021332 | CDS | 106387 | 106484 | 106387 | ID=Msa1390230-mRNA-1:cds;Parent=Msa1390230-mRNA-1 |
| tig0021332 | CDS | 106914 | 107025 | 106914 | ID=Msa1390230-mRNA-1:cds;Parent=Msa1390230-mRNA-1 |
| tig0021332 | CDS | 107120 | 107203 | 107120 | ID=Msa1390230-mRNA-1:cds;Parent=Msa1390230-mRNA-1 |
| tig0021332 | CDS | 107723 | 107851 | 107723 | ID=Msa1390230-mRNA-1:cds;Parent=Msa1390230-mRNA-1 |
| tig0021332 | CDS | 108174 | 108338 | 108174 | ID=Msa1390230-mRNA-1:cds;Parent=Msa1390230-mRNA-1 |
| tig0021332 | three_prime_UTR | 108339 | 108907 | 108339 | ID=Msa1390230-mRNA-1:three_prime_utr;Parent=Msa1390230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
