Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338000 | XP_024633202.1 | 92.055 | 365 | 29 | 0 | 1 | 365 | 1 | 365 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039330 | Msa0338000 | 0.801382 | 9.242862e-49 | -8.615850e-47 |
| Msa0178860 | Msa0338000 | -0.804812 | 1.804681e-49 | -8.615850e-47 |
| Msa0237660 | Msa0338000 | 0.817503 | 3.188351e-52 | -8.615850e-47 |
| Msa0249560 | Msa0338000 | 0.820691 | 6.001215e-53 | -8.615850e-47 |
| Msa0260270 | Msa0338000 | -0.813260 | 2.801294e-51 | -8.615850e-47 |
| Msa0288100 | Msa0338000 | 0.805962 | 1.036354e-49 | -8.615850e-47 |
| Msa0292050 | Msa0338000 | 0.814245 | 1.699479e-51 | -8.615850e-47 |
| Msa0338000 | Msa0379640 | 0.816389 | 5.672321e-52 | -8.615850e-47 |
| Msa0338000 | Msa0383490 | -0.817792 | 2.744249e-52 | -8.615850e-47 |
| Msa0338000 | Msa0453330 | 0.802586 | 5.230402e-49 | -8.615850e-47 |
| Msa0338000 | Msa0475490 | 0.807632 | 4.596661e-50 | -8.615850e-47 |
| Msa0338000 | Msa0477130 | -0.802570 | 5.268824e-49 | -8.615850e-47 |
| Msa0338000 | Msa0532060 | 0.816947 | 4.252910e-52 | -8.615850e-47 |
| Msa0338000 | Msa0532170 | 0.831996 | 1.216173e-55 | -8.615850e-47 |
| Msa0338000 | Msa0536220 | 0.823458 | 1.370040e-53 | -8.615850e-47 |
| Msa0338000 | Msa0553460 | 0.815621 | 8.418065e-52 | -8.615850e-47 |
| Msa0338000 | Msa0555020 | 0.806280 | 8.882119e-50 | -8.615850e-47 |
| Msa0338000 | Msa0590840 | 0.808589 | 2.875924e-50 | -8.615850e-47 |
| Msa0338000 | Msa0610890 | 0.800559 | 1.361829e-48 | -8.615850e-47 |
| Msa0338000 | Msa0647830 | 0.813681 | 2.263061e-51 | -8.615850e-47 |
| Msa0338000 | Msa0655990 | -0.809378 | 1.949039e-50 | -8.615850e-47 |
| Msa0338000 | Msa0658570 | 0.818298 | 2.108445e-52 | -8.615850e-47 |
| Msa0338000 | Msa0672690 | 0.804495 | 2.102048e-49 | -8.615850e-47 |
| Msa0338000 | Msa0678820 | 0.800943 | 1.136956e-48 | -8.615850e-47 |
| Msa0338000 | Msa0690440 | 0.813926 | 1.998821e-51 | -8.615850e-47 |
| Msa0338000 | Msa0699920 | -0.814818 | 1.269282e-51 | -8.615850e-47 |
| Msa0338000 | Msa0806090 | 0.807287 | 5.442427e-50 | -8.615850e-47 |
| Msa0338000 | Msa0942080 | -0.813674 | 2.270776e-51 | -8.615850e-47 |
| Msa0338000 | Msa1041730 | 0.812299 | 4.546582e-51 | -8.615850e-47 |
| Msa0338000 | Msa1044420 | 0.829934 | 3.898875e-55 | -8.615850e-47 |
| Msa0338000 | Msa1075080 | -0.820587 | 6.340445e-53 | -8.615850e-47 |
| Msa0338000 | Msa1075220 | -0.829478 | 5.034020e-55 | -8.615850e-47 |
| Msa0338000 | Msa1079730 | -0.803498 | 3.388371e-49 | -8.615850e-47 |
| Msa0338000 | Msa1116130 | -0.819937 | 8.934458e-53 | -8.615850e-47 |
| Msa0338000 | Msa1124540 | -0.802568 | 5.275130e-49 | -8.615850e-47 |
| Msa0338000 | Msa1139000 | -0.824971 | 6.043576e-54 | -8.615850e-47 |
| Msa0338000 | Msa1162550 | -0.824694 | 7.025062e-54 | -8.615850e-47 |
| Msa0338000 | Msa1167220 | 0.807204 | 5.665888e-50 | -8.615850e-47 |
| Msa0338000 | Msa1169090 | 0.803058 | 4.179068e-49 | -8.615850e-47 |
| Msa0338000 | Msa1183100 | -0.815777 | 7.771176e-52 | -8.615850e-47 |
| Msa0338000 | Msa1202770 | -0.807584 | 4.705490e-50 | -8.615850e-47 |
| Msa0338000 | Msa1239720 | 0.803647 | 3.154693e-49 | -8.615850e-47 |
| Msa0338000 | Msa1271300 | 0.813776 | 2.157237e-51 | -8.615850e-47 |
| Msa0338000 | Msa1295540 | -0.811499 | 6.790071e-51 | -8.615850e-47 |
| Msa0338000 | Msa1322890 | 0.806624 | 7.513994e-50 | -8.615850e-47 |
| Msa0338000 | Msa1376890 | 0.817301 | 3.541020e-52 | -8.615850e-47 |
| Msa0338000 | Msa1401530 | 0.800583 | 1.346616e-48 | -8.615850e-47 |
| Msa0338000 | Msa1416140 | -0.816018 | 6.863292e-52 | -8.615850e-47 |
| Msa0338000 | Msa1451620 | -0.824910 | 6.249720e-54 | -8.615850e-47 |
| Msa0338000 | Msa1454860 | 0.808792 | 2.601727e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338000 | MtrunA17_Chr2g0325491 | 92.055 | 365 | 29 | 0 | 1 | 365 | 1 | 365 | 0.0 | 699 |
| Msa0338000 | MtrunA17_Chr4g0041021 | 43.411 | 387 | 175 | 7 | 4 | 361 | 11 | 382 | 1.02e-88 | 272 |
| Msa0338000 | MtrunA17_Chr5g0421231 | 78.409 | 88 | 19 | 0 | 145 | 232 | 570 | 657 | 4.60e-35 | 136 |
| Msa0338000 | MtrunA17_Chr8g0360531 | 50.847 | 59 | 29 | 0 | 4 | 62 | 10 | 68 | 1.85e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0338000 | AT2G31130.6 | 45.556 | 90 | 40 | 2 | 2 | 87 | 6 | 90 | 3.01e-16 | 80.1 |
| Msa0338000 | AT2G31130.3 | 45.556 | 90 | 40 | 2 | 2 | 87 | 6 | 90 | 3.01e-16 | 80.1 |
| Msa0338000 | AT2G31130.1 | 45.556 | 90 | 40 | 2 | 2 | 87 | 6 | 90 | 3.01e-16 | 80.1 |
| Msa0338000 | AT2G31130.4 | 45.556 | 90 | 40 | 2 | 2 | 87 | 6 | 90 | 3.01e-16 | 80.1 |
| Msa0338000 | AT2G31130.2 | 45.556 | 90 | 40 | 2 | 2 | 87 | 6 | 90 | 3.01e-16 | 80.1 |
| Msa0338000 | AT2G31130.5 | 45.556 | 90 | 40 | 2 | 2 | 87 | 6 | 90 | 3.01e-16 | 80.1 |
Find 82 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACGTTGAAATGACTTCTT+AGG | 0.149183 | 2_4:-58137812 | None:intergenic |
| CATCCAAGGGCCATTATCTT+TGG | 0.279261 | 2_4:-58139217 | None:intergenic |
| TTGCATGGGAACAATGAAAA+TGG | 0.296806 | 2_4:+58139061 | Msa0338000:CDS |
| ATGATTTGTTTCCAGATAAT+CGG | 0.332635 | 2_4:+58136761 | Msa0338000:intron |
| TCAAGTATGAATCATGATTC+TGG | 0.348680 | 2_4:+58137881 | Msa0338000:CDS |
| GGATCATATTCTCAAACTTC+TGG | 0.352088 | 2_4:-58136877 | None:intergenic |
| GTACTATGAGAACAATCTTC+AGG | 0.406202 | 2_4:-58138420 | None:intergenic |
| GCATTAGCATATTGACCTAT+AGG | 0.407489 | 2_4:-58137779 | None:intergenic |
| GTGGAACATTGAATGTAATA+AGG | 0.408476 | 2_4:-58139369 | None:intergenic |
| TGTCGGTGCACCAAAGATAA+TGG | 0.421658 | 2_4:+58139207 | Msa0338000:three_prime_UTR |
| CTTTGTATTAACCGTTGCCT+TGG | 0.433232 | 2_4:-58138877 | None:intergenic |
| TATTGACCTATAGGCAATAC+AGG | 0.434816 | 2_4:-58137770 | None:intergenic |
| GAGACATCATCCTGCGAAGT+TGG | 0.437673 | 2_4:-58139112 | None:intergenic |
| TGAGTGCTCGGTTGATCGCT+TGG | 0.441160 | 2_4:-58137861 | None:intergenic |
| GCGACTTCACTGGCTGTCTT+CGG | 0.444331 | 2_4:-58138019 | None:intergenic |
| AAACCGCGGTATTCCCGTAT+TGG | 0.446464 | 2_4:+58138204 | Msa0338000:CDS |
| TTTGTATTAACCGTTGCCTT+GGG | 0.446863 | 2_4:-58138876 | None:intergenic |
| AGATTTCTTATACAAAGAAA+AGG | 0.463264 | 2_4:-58139005 | None:intergenic |
| AACTAACTGAAGTTCGTCTC+TGG | 0.466709 | 2_4:-58138853 | None:intergenic |
| GGCGTGCAAAACAACATGTT+CGG | 0.468393 | 2_4:+58137933 | Msa0338000:CDS |
| AACGTTGAAATGACTTCTTA+GGG | 0.471471 | 2_4:-58137811 | None:intergenic |
| TCACTGGCTGTCTTCGGTGC+AGG | 0.473319 | 2_4:-58138013 | None:intergenic |
| GAAGTTTGAGAATATGATCC+TGG | 0.474370 | 2_4:+58136880 | Msa0338000:CDS |
| CAGTCCAGTACCTGTATGTC+AGG | 0.475420 | 2_4:-58136800 | None:intergenic |
| GCTACCCCTGTATTGCCTAT+AGG | 0.475822 | 2_4:+58137764 | Msa0338000:CDS |
| TTCAGCTGAATCAACCAATA+CGG | 0.476111 | 2_4:-58138218 | None:intergenic |
| GAGTTTATGTCCAACTTCGC+AGG | 0.480137 | 2_4:+58139102 | Msa0338000:CDS |
| GCATCTCAATATCCTGCATA+AGG | 0.480319 | 2_4:-58139347 | None:intergenic |
| ATACAGAGAAGTTCCCATTC+GGG | 0.483134 | 2_4:-58139139 | None:intergenic |
| GCAAGTGTGTTATGATGCCT+TGG | 0.487667 | 2_4:+58136840 | Msa0338000:exon |
| ATGATTCATACTTGAGTGCT+CGG | 0.490637 | 2_4:-58137873 | None:intergenic |
| TTCCAAGAAAAGAATGGTAA+AGG | 0.491376 | 2_4:+58137832 | Msa0338000:CDS |
| TCGACCTGACATACAGGTAC+TGG | 0.492061 | 2_4:+58136796 | Msa0338000:five_prime_UTR |
| GAGAATCAAATGCAGATTGT+CGG | 0.494930 | 2_4:+58137680 | Msa0338000:CDS |
| TCAACGTTCCAAGAAAAGAA+TGG | 0.498812 | 2_4:+58137826 | Msa0338000:CDS |
| TGATGTCTCTGAACCCGAAT+GGG | 0.499518 | 2_4:+58139126 | Msa0338000:CDS |
| GATTTCTTATACAAAGAAAA+GGG | 0.503803 | 2_4:-58139004 | None:intergenic |
| ACATTGTGTCGTCCACCTCC+AGG | 0.509831 | 2_4:-58136898 | None:intergenic |
| TATACAGAGAAGTTCCCATT+CGG | 0.509868 | 2_4:-58139140 | None:intergenic |
| GAAGAGCTTGCATTATTGCA+TGG | 0.512750 | 2_4:+58139046 | Msa0338000:CDS |
| GGGAACAATGAAAATGGAAA+TGG | 0.513366 | 2_4:+58139067 | Msa0338000:CDS |
| CAACCTTCGACCTGACATAC+AGG | 0.513394 | 2_4:+58136790 | Msa0338000:five_prime_UTR |
| CAAGTCGTTGTCTTGTCTCG+TGG | 0.515765 | 2_4:-58138802 | None:intergenic |
| GTGTCACTAATTAGAACTGT+TGG | 0.533891 | 2_4:-58139276 | None:intergenic |
| AAGAGCTTGCATTATTGCAT+GGG | 0.541758 | 2_4:+58139047 | Msa0338000:CDS |
| TAACTTCTTAGTCCTTATGC+AGG | 0.542325 | 2_4:+58139335 | Msa0338000:three_prime_UTR |
| TCAGCTGAATCAACCAATAC+GGG | 0.546541 | 2_4:-58138217 | None:intergenic |
| GCACCAAAGATAATGGCCCT+TGG | 0.548551 | 2_4:+58139214 | Msa0338000:three_prime_UTR |
| ACAATCGCTGTGTCTCATCC+AGG | 0.556728 | 2_4:+58138441 | Msa0338000:CDS |
| ACAGGGGTAGCACATGAAGA+TGG | 0.556868 | 2_4:-58137752 | None:intergenic |
| CAGATTGTCGGAGAAAGTGT+TGG | 0.564686 | 2_4:+58137692 | Msa0338000:CDS |
| AAAGTTCTACTCAGAAGTCA+TGG | 0.568093 | 2_4:+58137715 | Msa0338000:CDS |
| CTTTGTATAAGAAATCTACA+AGG | 0.568921 | 2_4:+58139011 | Msa0338000:CDS |
| TCAGTTAGTTCCCAAGGCAA+CGG | 0.569255 | 2_4:+58138866 | Msa0338000:CDS |
| CACCGTTACAACTTGTACAA+CGG | 0.571046 | 2_4:+58139298 | Msa0338000:three_prime_UTR |
| CATACTGTGATATAATTCAA+AGG | 0.573613 | 2_4:-58135772 | None:intergenic |
| ACAATCTGCTACAGCTGCAA+AGG | 0.574614 | 2_4:-58138149 | None:intergenic |
| TGAGAATATGATCCTGGAGG+TGG | 0.576829 | 2_4:+58136886 | Msa0338000:CDS |
| CGAACTTCAGTTAGTTCCCA+AGG | 0.579450 | 2_4:+58138860 | Msa0338000:CDS |
| TGTGTTATGATGCCTTGGCT+TGG | 0.580962 | 2_4:+58136845 | Msa0338000:exon |
| ATGATGTCTCTGAACCCGAA+TGG | 0.585604 | 2_4:+58139125 | Msa0338000:CDS |
| CACGGTGATCATGTTGTAGG+TGG | 0.601121 | 2_4:+58139164 | Msa0338000:exon |
| GCTCGAGGAAGTTTGTGTCA+TGG | 0.603153 | 2_4:+58138827 | Msa0338000:CDS |
| TACCGTTGTACAAGTTGTAA+CGG | 0.610323 | 2_4:-58139300 | None:intergenic |
| TACCACGGTGATCATGTTGT+AGG | 0.611943 | 2_4:+58139161 | Msa0338000:exon |
| GGTGGACGACACAATGTTTG+AGG | 0.621457 | 2_4:+58136904 | Msa0338000:CDS |
| ATTGACCTATAGGCAATACA+GGG | 0.623800 | 2_4:-58137769 | None:intergenic |
| CAATGTAAATGAAAATCATG+AGG | 0.632995 | 2_4:+58138090 | Msa0338000:CDS |
| TGGTATATATTACCAAGCCA+AGG | 0.637102 | 2_4:-58136857 | None:intergenic |
| AGACAACGACTTGAAGCTCG+AGG | 0.652614 | 2_4:+58138812 | Msa0338000:CDS |
| GTACCTGTATGTCAGGTCGA+AGG | 0.657958 | 2_4:-58136793 | None:intergenic |
| CTAGCGTGCACAAATAGTGT+CGG | 0.671351 | 2_4:+58139190 | Msa0338000:three_prime_UTR |
| AAATGGAAATGGTGATTGCG+TGG | 0.672357 | 2_4:+58139078 | Msa0338000:CDS |
| GGTTAATACAAAGAAGAGAG+AGG | 0.674515 | 2_4:+58138887 | Msa0338000:CDS |
| GGGGTAGCACATGAAGATGG+AGG | 0.680389 | 2_4:-58137749 | None:intergenic |
| GACATACTTGAAGATGCACA+TGG | 0.688594 | 2_4:+58138268 | Msa0338000:CDS |
| CAACCAATACGGGAATACCG+CGG | 0.698495 | 2_4:-58138207 | None:intergenic |
| GGGAACTTCTCTGTATACCA+CGG | 0.703402 | 2_4:+58139146 | Msa0338000:CDS |
| GTTTGAGAATATGATCCTGG+AGG | 0.722125 | 2_4:+58136883 | Msa0338000:CDS |
| TTGACCTATAGGCAATACAG+GGG | 0.763489 | 2_4:-58137768 | None:intergenic |
| GCAAGTACTGAACAAAACCG+CGG | 0.773893 | 2_4:+58138190 | Msa0338000:CDS |
| CACCTACAACATGATCACCG+TGG | 0.789761 | 2_4:-58139163 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGGTAATTTTTTATTAAACT+TGG | + | chr2_4:58135896-58135915 | Msa0338000:intron | 15.0% |
| !! | TTTGACAAAATTACATAATT+CGG | - | chr2_4:58136187-58136206 | None:intergenic | 15.0% |
| !!! | TAATTTTGTCAAATTATTAG+CGG | + | chr2_4:58136194-58136213 | Msa0338000:intron | 15.0% |
| !!! | TCAAAAAGAATACTTTTATT+TGG | + | chr2_4:58137912-58137931 | Msa0338000:CDS | 15.0% |
| !!! | TTTTCCTGATTTTTATATGA+GGG | + | chr2_4:58136558-58136577 | Msa0338000:intron | 20.0% |
| !! | AGAATTAACATTGTAATCTT+AGG | - | chr2_4:58137272-58137291 | None:intergenic | 20.0% |
| !! | GATTTCTTATACAAAGAAAA+GGG | - | chr2_4:58139007-58139026 | None:intergenic | 20.0% |
| !! | AGATTTCTTATACAAAGAAA+AGG | - | chr2_4:58139008-58139027 | None:intergenic | 20.0% |
| !!! | TTAGATTTTAATACATCCAA+GGG | - | chr2_4:58139233-58139252 | None:intergenic | 20.0% |
| !!! | TTTAGATTTTAATACATCCA+AGG | - | chr2_4:58139234-58139253 | None:intergenic | 20.0% |
| ! | CATACTGTGATATAATTCAA+AGG | - | chr2_4:58135775-58135794 | None:intergenic | 25.0% |
| !! | ATATCACAGTATGTTTTACA+TGG | + | chr2_4:58135782-58135801 | Msa0338000:intron | 25.0% |
| !! | TATCACAGTATGTTTTACAT+GGG | + | chr2_4:58135783-58135802 | Msa0338000:intron | 25.0% |
| !!! | TTTATTTTCAGCTGTTTCTT+TGG | + | chr2_4:58135876-58135895 | Msa0338000:intron | 25.0% |
| ! | GGCTTAATACAAAATATGTT+AGG | + | chr2_4:58136455-58136474 | Msa0338000:intron | 25.0% |
| !!! | TAGTTTTGAAGACATCATAA+TGG | + | chr2_4:58136533-58136552 | Msa0338000:intron | 25.0% |
| !!! | AGTTTTGAAGACATCATAAT+GGG | + | chr2_4:58136534-58136553 | Msa0338000:intron | 25.0% |
| !! | GTTTTCCTGATTTTTATATG+AGG | + | chr2_4:58136557-58136576 | Msa0338000:intron | 25.0% |
| !! | ATTTTTATATGAGGGTAGTA+GGG | + | chr2_4:58136566-58136585 | Msa0338000:intron | 25.0% |
| ! | TATAGAACAATCAACTAAAC+TGG | - | chr2_4:58136608-58136627 | None:intergenic | 25.0% |
| ! | AAATGTAGAAATATTCTACC+AGG | + | chr2_4:58136629-58136648 | Msa0338000:intron | 25.0% |
| ! | TAAAATAAATTGATCATGCC+TGG | - | chr2_4:58136650-58136669 | None:intergenic | 25.0% |
| !! | TTAATGGTTGTTACTTCTAT+AGG | - | chr2_4:58136713-58136732 | None:intergenic | 25.0% |
| ! | CAACCATTAATTATGCATAT+TGG | + | chr2_4:58136723-58136742 | Msa0338000:intron | 25.0% |
| ! | CAACCAATATGCATAATTAA+TGG | - | chr2_4:58136729-58136748 | None:intergenic | 25.0% |
| ! | ATTATCTGGAAACAAATCAT+GGG | - | chr2_4:58136761-58136780 | None:intergenic | 25.0% |
| !!! | ATGATTTGTTTCCAGATAAT+CGG | + | chr2_4:58136761-58136780 | Msa0338000:intron | 25.0% |
| ! | AGGATAAGTATATATAACTG+AGG | - | chr2_4:58136941-58136960 | None:intergenic | 25.0% |
| !! | ACTTTAAAGAAGAATAGGAT+AGG | - | chr2_4:58136961-58136980 | None:intergenic | 25.0% |
| !! | ACACTACTTTAAAGAAGAAT+AGG | - | chr2_4:58136966-58136985 | None:intergenic | 25.0% |
| !! | AAAGTAGTGTTTTCAAATAG+CGG | + | chr2_4:58136976-58136995 | Msa0338000:intron | 25.0% |
| ! | CATGCAATAAATGCTTAATT+AGG | - | chr2_4:58137186-58137205 | None:intergenic | 25.0% |
| !! | ACTTGTCTTGGTATTTATTT+TGG | + | chr2_4:58137433-58137452 | Msa0338000:intron | 25.0% |
| !! | CTCATGATTTTCATTTACAT+TGG | - | chr2_4:58138092-58138111 | None:intergenic | 25.0% |
| ! | CAATGTAAATGAAAATCATG+AGG | + | chr2_4:58138090-58138109 | Msa0338000:CDS | 25.0% |
| !! | CTGAAGTACTAATTGAATTT+AGG | + | chr2_4:58138481-58138500 | Msa0338000:intron | 25.0% |
| !! | TGTGTATTGAGACAATTTTA+GGG | - | chr2_4:58138708-58138727 | None:intergenic | 25.0% |
| !! | ATGTGTATTGAGACAATTTT+AGG | - | chr2_4:58138709-58138728 | None:intergenic | 25.0% |
| !!! | ATATTCATTTTAACCCTGAT+TGG | + | chr2_4:58138733-58138752 | Msa0338000:intron | 25.0% |
| ! | GTGCATAAAAAATAGAAAAG+GGG | - | chr2_4:58138925-58138944 | None:intergenic | 25.0% |
| ! | CGTGCATAAAAAATAGAAAA+GGG | - | chr2_4:58138926-58138945 | None:intergenic | 25.0% |
| ! | ACGTGCATAAAAAATAGAAA+AGG | - | chr2_4:58138927-58138946 | None:intergenic | 25.0% |
| ! | CTTTGTATAAGAAATCTACA+AGG | + | chr2_4:58139011-58139030 | Msa0338000:CDS | 25.0% |
| ! | TTGTTATTGAGATTCTCTCT+CGG | + | chr2_4:58135847-58135866 | Msa0338000:intron | 30.0% |
| TGAGTTAGAATCAATTCTTG+AGG | - | chr2_4:58136055-58136074 | None:intergenic | 30.0% | |
| ! | ACGATGACTAAAATTGACTT+TGG | - | chr2_4:58136271-58136290 | None:intergenic | 30.0% |
| !! | ACAAGTATTGAGTGTATGTT+TGG | - | chr2_4:58136298-58136317 | None:intergenic | 30.0% |
| ACATACACTCAATACTTGTT+TGG | + | chr2_4:58136299-58136318 | Msa0338000:intron | 30.0% | |
| !!! | GTTTTGAAGACATCATAATG+GGG | + | chr2_4:58136535-58136554 | Msa0338000:intron | 30.0% |
| ACTACCCTCATATAAAAATC+AGG | - | chr2_4:58136565-58136584 | None:intergenic | 30.0% | |
| ! | GATTTTTATATGAGGGTAGT+AGG | + | chr2_4:58136565-58136584 | Msa0338000:intron | 30.0% |
| TTATCTGGAAACAAATCATG+GGG | - | chr2_4:58136760-58136779 | None:intergenic | 30.0% | |
| GATTATCTGGAAACAAATCA+TGG | - | chr2_4:58136762-58136781 | None:intergenic | 30.0% | |
| TTATCAATCGCAGAAATTAG+AGG | - | chr2_4:58137142-58137161 | None:intergenic | 30.0% | |
| ! | CGATTGATAACACTACTTTA+AGG | + | chr2_4:58137152-58137171 | Msa0338000:intron | 30.0% |
| TACAAACAAGAGCTATAGAT+AGG | - | chr2_4:58137354-58137373 | None:intergenic | 30.0% | |
| ! | TTACACAACTGGTTTCATAA+AGG | - | chr2_4:58137557-58137576 | None:intergenic | 30.0% |
| ! | AATGAGAGTTTTTACACAAC+TGG | - | chr2_4:58137568-58137587 | None:intergenic | 30.0% |
| !!! | CGTTTTCTTTTGTTTTTTCG+AGG | + | chr2_4:58137635-58137654 | Msa0338000:intron | 30.0% |
| !!! | TCTTTTGTTTTTTCGAGGAT+AGG | + | chr2_4:58137640-58137659 | Msa0338000:intron | 30.0% |
| AACGTTGAAATGACTTCTTA+GGG | - | chr2_4:58137814-58137833 | None:intergenic | 30.0% | |
| TTCCAAGAAAAGAATGGTAA+AGG | + | chr2_4:58137832-58137851 | Msa0338000:CDS | 30.0% | |
| TCAAGTATGAATCATGATTC+TGG | + | chr2_4:58137881-58137900 | Msa0338000:CDS | 30.0% | |
| ATGGTTTCATTATTACCTCA+TGG | + | chr2_4:58138317-58138336 | Msa0338000:intron | 30.0% | |
| ATTACCTCATGGTTTATTGT+TGG | + | chr2_4:58138328-58138347 | Msa0338000:intron | 30.0% | |
| ATTACCAACAATAAACCATG+AGG | - | chr2_4:58138335-58138354 | None:intergenic | 30.0% | |
| ! | GTTGCATAACTTTTCTTGTA+GGG | + | chr2_4:58138373-58138392 | Msa0338000:intron | 30.0% |
| ! | TTTTCTTGTAGGGTTTTCTA+TGG | + | chr2_4:58138383-58138402 | Msa0338000:intron | 30.0% |
| GCATGATTTGAATTAATACC+TGG | - | chr2_4:58138462-58138481 | None:intergenic | 30.0% | |
| TCTAAGCAAGAACTTCTAAA+TGG | - | chr2_4:58138561-58138580 | None:intergenic | 30.0% | |
| AGAAGTTCTTGCTTAGAATT+TGG | + | chr2_4:58138564-58138583 | Msa0338000:intron | 30.0% | |
| ACTTCGTCTAATTAAGAACA+TGG | - | chr2_4:58138610-58138629 | None:intergenic | 30.0% | |
| ATGTTCTTAATTAGACGAAG+TGG | + | chr2_4:58138609-58138628 | Msa0338000:intron | 30.0% | |
| ! | GTGTATTGAGACAATTTTAG+GGG | - | chr2_4:58138707-58138726 | None:intergenic | 30.0% |
| TTGCTATAACATTCCAATCA+GGG | - | chr2_4:58138749-58138768 | None:intergenic | 30.0% | |
| ! | TTTGCTATAACATTCCAATC+AGG | - | chr2_4:58138750-58138769 | None:intergenic | 30.0% |
| TTTCTCGTTTGAAGAAAAAG+TGG | + | chr2_4:58138975-58138994 | Msa0338000:intron | 30.0% | |
| !!! | GTTTGTTCTGGTTTTTAGAG+AGG | + | chr2_4:58135931-58135950 | Msa0338000:intron | 35.0% |
| !! | TTTTGTTCCACTCTTTGAAG+AGG | + | chr2_4:58135967-58135986 | Msa0338000:intron | 35.0% |
| ATATGTTTGCATGTCTTCCA+GGG | + | chr2_4:58136019-58136038 | Msa0338000:intron | 35.0% | |
| GTAATTACAAGTACACCTGT+CGG | - | chr2_4:58136163-58136182 | None:intergenic | 35.0% | |
| ! | GGTCTAAAAGTACATTGATC+AGG | - | chr2_4:58136692-58136711 | None:intergenic | 35.0% |
| TATCTGGAAACAAATCATGG+GGG | - | chr2_4:58136759-58136778 | None:intergenic | 35.0% | |
| TGGTATATATTACCAAGCCA+AGG | - | chr2_4:58136860-58136879 | None:intergenic | 35.0% | |
| GGATCATATTCTCAAACTTC+TGG | - | chr2_4:58136880-58136899 | None:intergenic | 35.0% | |
| GAAGTTTGAGAATATGATCC+TGG | + | chr2_4:58136880-58136899 | Msa0338000:CDS | 35.0% | |
| ! | TTCAAATTCCGCTTTGCTAT+AGG | - | chr2_4:58137018-58137037 | None:intergenic | 35.0% |
| TTGTCAAGTAGCAACTATAG+CGG | + | chr2_4:58137080-58137099 | Msa0338000:intron | 35.0% | |
| GGATGCTTAGGACATATATA+AGG | - | chr2_4:58137333-58137352 | None:intergenic | 35.0% | |
| TTAAAGGAGTTAACAGACCA+GGG | - | chr2_4:58137485-58137504 | None:intergenic | 35.0% | |
| !! | AGTTAAACTGATTCGAGCTA+AGG | - | chr2_4:58137509-58137528 | None:intergenic | 35.0% |
| TAAAGGTCATACTTGTCGTA+GGG | - | chr2_4:58137540-58137559 | None:intergenic | 35.0% | |
| ATAAAGGTCATACTTGTCGT+AGG | - | chr2_4:58137541-58137560 | None:intergenic | 35.0% | |
| !!! | GTTTTTTCGAGGATAGGAAA+CGG | + | chr2_4:58137646-58137665 | Msa0338000:intron | 35.0% |
| GAGAATCAAATGCAGATTGT+CGG | + | chr2_4:58137680-58137699 | Msa0338000:CDS | 35.0% | |
| AAAGTTCTACTCAGAAGTCA+TGG | + | chr2_4:58137715-58137734 | Msa0338000:CDS | 35.0% | |
| ATTGACCTATAGGCAATACA+GGG | - | chr2_4:58137772-58137791 | None:intergenic | 35.0% | |
| TATTGACCTATAGGCAATAC+AGG | - | chr2_4:58137773-58137792 | None:intergenic | 35.0% | |
| GCATTAGCATATTGACCTAT+AGG | - | chr2_4:58137782-58137801 | None:intergenic | 35.0% | |
| GAACGTTGAAATGACTTCTT+AGG | - | chr2_4:58137815-58137834 | None:intergenic | 35.0% | |
| TCAACGTTCCAAGAAAAGAA+TGG | + | chr2_4:58137826-58137845 | Msa0338000:CDS | 35.0% | |
| ! | AGCCTTTACCATTCTTTTCT+TGG | - | chr2_4:58137837-58137856 | None:intergenic | 35.0% |
| ATGATTCATACTTGAGTGCT+CGG | - | chr2_4:58137876-58137895 | None:intergenic | 35.0% | |
| TTCAGCTGAATCAACCAATA+CGG | - | chr2_4:58138221-58138240 | None:intergenic | 35.0% | |
| GTTTGTATCTTTGTGTCTCT+TGG | + | chr2_4:58138290-58138309 | Msa0338000:intron | 35.0% | |
| ! | CGTTGCATAACTTTTCTTGT+AGG | + | chr2_4:58138372-58138391 | Msa0338000:intron | 35.0% |
| GTACTATGAGAACAATCTTC+AGG | - | chr2_4:58138423-58138442 | None:intergenic | 35.0% | |
| TTTGTATTAACCGTTGCCTT+GGG | - | chr2_4:58138879-58138898 | None:intergenic | 35.0% | |
| GGTTAATACAAAGAAGAGAG+AGG | + | chr2_4:58138887-58138906 | Msa0338000:CDS | 35.0% | |
| AAGAGCTTGCATTATTGCAT+GGG | + | chr2_4:58139047-58139066 | Msa0338000:CDS | 35.0% | |
| TTGCATGGGAACAATGAAAA+TGG | + | chr2_4:58139061-58139080 | Msa0338000:CDS | 35.0% | |
| GGGAACAATGAAAATGGAAA+TGG | + | chr2_4:58139067-58139086 | Msa0338000:CDS | 35.0% | |
| TATACAGAGAAGTTCCCATT+CGG | - | chr2_4:58139143-58139162 | None:intergenic | 35.0% | |
| ! | GTGTCACTAATTAGAACTGT+TGG | - | chr2_4:58139279-58139298 | None:intergenic | 35.0% |
| TACCGTTGTACAAGTTGTAA+CGG | - | chr2_4:58139303-58139322 | None:intergenic | 35.0% | |
| TAACTTCTTAGTCCTTATGC+AGG | + | chr2_4:58139335-58139354 | Msa0338000:three_prime_UTR | 35.0% | |
| ! | AGTTTGCATGCTGTTTGTTC+TGG | + | chr2_4:58135919-58135938 | Msa0338000:intron | 40.0% |
| GATATGTTTGCATGTCTTCC+AGG | + | chr2_4:58136018-58136037 | Msa0338000:intron | 40.0% | |
| TATGTTTGCATGTCTTCCAG+GGG | + | chr2_4:58136020-58136039 | Msa0338000:intron | 40.0% | |
| TCATCCAAAGCTATGAAGCA+CGG | + | chr2_4:58136107-58136126 | Msa0338000:intron | 40.0% | |
| TGAAGCACGAATACGGAATA+CGG | - | chr2_4:58136243-58136262 | None:intergenic | 40.0% | |
| GGATCTATGAAGCACGAATA+CGG | - | chr2_4:58136250-58136269 | None:intergenic | 40.0% | |
| TGTTTGGTTATGTGTTTCCG+TGG | + | chr2_4:58136315-58136334 | Msa0338000:intron | 40.0% | |
| TAGTGCGTATATCAATTCCG+CGG | - | chr2_4:58136421-58136440 | None:intergenic | 40.0% | |
| CGCACTACTAAAGCAAACAT+AGG | + | chr2_4:58136434-58136453 | Msa0338000:intron | 40.0% | |
| ATCTGGAAACAAATCATGGG+GGG | - | chr2_4:58136758-58136777 | None:intergenic | 40.0% | |
| GTTTGAGAATATGATCCTGG+AGG | + | chr2_4:58136883-58136902 | Msa0338000:CDS | 40.0% | |
| CATGATGAACATTCGAATGC+TGG | + | chr2_4:58137202-58137221 | Msa0338000:intron | 40.0% | |
| GAGCTATAGATAGGATGCTT+AGG | - | chr2_4:58137345-58137364 | None:intergenic | 40.0% | |
| CTCTTCACTTGTACTTGTCT+TGG | + | chr2_4:58137421-58137440 | Msa0338000:intron | 40.0% | |
| CTTAAAGGAGTTAACAGACC+AGG | - | chr2_4:58137486-58137505 | None:intergenic | 40.0% | |
| TGATTCGAGCTAAGGCTTAA+AGG | - | chr2_4:58137501-58137520 | None:intergenic | 40.0% | |
| AAAGGTCATACTTGTCGTAG+GGG | - | chr2_4:58137539-58137558 | None:intergenic | 40.0% | |
| TTGACCTATAGGCAATACAG+GGG | - | chr2_4:58137771-58137790 | None:intergenic | 40.0% | |
| CGATCAAAAACAGATGGATG+CGG | + | chr2_4:58138043-58138062 | Msa0338000:CDS | 40.0% | |
| TCAGCTGAATCAACCAATAC+GGG | - | chr2_4:58138220-58138239 | None:intergenic | 40.0% | |
| GACATACTTGAAGATGCACA+TGG | + | chr2_4:58138268-58138287 | Msa0338000:CDS | 40.0% | |
| CTTTGTGTCTCTTGGACATA+TGG | + | chr2_4:58138298-58138317 | Msa0338000:intron | 40.0% | |
| !!! | GTCTCGTGGTTTTATCATCT+TGG | - | chr2_4:58138791-58138810 | None:intergenic | 40.0% |
| AACTAACTGAAGTTCGTCTC+TGG | - | chr2_4:58138856-58138875 | None:intergenic | 40.0% | |
| CTTTGTATTAACCGTTGCCT+TGG | - | chr2_4:58138880-58138899 | None:intergenic | 40.0% | |
| GAAGAGCTTGCATTATTGCA+TGG | + | chr2_4:58139046-58139065 | Msa0338000:CDS | 40.0% | |
| AAATGGAAATGGTGATTGCG+TGG | + | chr2_4:58139078-58139097 | Msa0338000:CDS | 40.0% | |
| ATACAGAGAAGTTCCCATTC+GGG | - | chr2_4:58139142-58139161 | None:intergenic | 40.0% | |
| CACCGTTACAACTTGTACAA+CGG | + | chr2_4:58139298-58139317 | Msa0338000:three_prime_UTR | 40.0% | |
| GCATCTCAATATCCTGCATA+AGG | - | chr2_4:58139350-58139369 | None:intergenic | 40.0% | |
| ! | TGTTCCACTCTTTGAAGAGG+AGG | + | chr2_4:58135970-58135989 | Msa0338000:intron | 45.0% |
| ATGTTTGCATGTCTTCCAGG+GGG | + | chr2_4:58136021-58136040 | Msa0338000:intron | 45.0% | |
| ! | GAGGGTAGTAGGGCATTATT+AGG | + | chr2_4:58136576-58136595 | Msa0338000:intron | 45.0% |
| GGTTGTTCTAGCCGATTATC+TGG | - | chr2_4:58136775-58136794 | None:intergenic | 45.0% | |
| GCAAGTGTGTTATGATGCCT+TGG | + | chr2_4:58136840-58136859 | Msa0338000:exon | 45.0% | |
| TGTGTTATGATGCCTTGGCT+TGG | + | chr2_4:58136845-58136864 | Msa0338000:exon | 45.0% | |
| TGAGAATATGATCCTGGAGG+TGG | + | chr2_4:58136886-58136905 | Msa0338000:CDS | 45.0% | |
| CGCTATAGCCTATAGCAAAG+CGG | + | chr2_4:58137007-58137026 | Msa0338000:intron | 45.0% | |
| GGTTCAAACTCTGGTGAATG+AGG | - | chr2_4:58137464-58137483 | None:intergenic | 45.0% | |
| ATTCACCAGAGTTTGAACCC+TGG | + | chr2_4:58137465-58137484 | Msa0338000:intron | 45.0% | |
| AAGGTCATACTTGTCGTAGG+GGG | - | chr2_4:58137538-58137557 | None:intergenic | 45.0% | |
| ! | CAGATTGTCGGAGAAAGTGT+TGG | + | chr2_4:58137692-58137711 | Msa0338000:CDS | 45.0% |
| GGCGTGCAAAACAACATGTT+CGG | + | chr2_4:58137933-58137952 | Msa0338000:CDS | 45.0% | |
| ! | TTTTGATCGAGCGACTTCAC+TGG | - | chr2_4:58138032-58138051 | None:intergenic | 45.0% |
| GTCGCTCGATCAAAAACAGA+TGG | + | chr2_4:58138037-58138056 | Msa0338000:CDS | 45.0% | |
| ACAATCTGCTACAGCTGCAA+AGG | - | chr2_4:58138152-58138171 | None:intergenic | 45.0% | |
| !! | GCAAGTACTGAACAAAACCG+CGG | + | chr2_4:58138190-58138209 | Msa0338000:CDS | 45.0% |
| CGAACTTCAGTTAGTTCCCA+AGG | + | chr2_4:58138860-58138879 | Msa0338000:CDS | 45.0% | |
| TCAGTTAGTTCCCAAGGCAA+CGG | + | chr2_4:58138866-58138885 | Msa0338000:CDS | 45.0% | |
| GAGTTTATGTCCAACTTCGC+AGG | + | chr2_4:58139102-58139121 | Msa0338000:CDS | 45.0% | |
| ATGATGTCTCTGAACCCGAA+TGG | + | chr2_4:58139125-58139144 | Msa0338000:CDS | 45.0% | |
| TGATGTCTCTGAACCCGAAT+GGG | + | chr2_4:58139126-58139145 | Msa0338000:CDS | 45.0% | |
| GGGAACTTCTCTGTATACCA+CGG | + | chr2_4:58139146-58139165 | Msa0338000:CDS | 45.0% | |
| TACCACGGTGATCATGTTGT+AGG | + | chr2_4:58139161-58139180 | Msa0338000:exon | 45.0% | |
| CTAGCGTGCACAAATAGTGT+CGG | + | chr2_4:58139190-58139209 | Msa0338000:three_prime_UTR | 45.0% | |
| TGTCGGTGCACCAAAGATAA+TGG | + | chr2_4:58139207-58139226 | Msa0338000:three_prime_UTR | 45.0% | |
| CATCCAAGGGCCATTATCTT+TGG | - | chr2_4:58139220-58139239 | None:intergenic | 45.0% | |
| ! | CCACTCTTTGAAGAGGAGGT+CGG | + | chr2_4:58135974-58135993 | Msa0338000:intron | 50.0% |
| ! | CACTCTTTGAAGAGGAGGTC+GGG | + | chr2_4:58135975-58135994 | Msa0338000:intron | 50.0% |
| GTGTCCGTGCTTCATAGCTT+TGG | - | chr2_4:58136114-58136133 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | chr2_4:58136118-58136137 | Msa0338000:intron | 50.0% | |
| CATGGACACACATTTGGCCA+CGG | - | chr2_4:58136335-58136354 | None:intergenic | 50.0% | |
| AGCAGCCATGGACACACATT+TGG | - | chr2_4:58136341-58136360 | None:intergenic | 50.0% | |
| AATCGCAGTGAAAGCAGCCA+TGG | - | chr2_4:58136353-58136372 | None:intergenic | 50.0% | |
| !! | GCTCTGAAACCAAGCTTCTG+CGG | + | chr2_4:58136380-58136399 | Msa0338000:intron | 50.0% |
| ! | GGCAATGTGGTTTTTCACCG+CGG | + | chr2_4:58136401-58136420 | Msa0338000:intron | 50.0% |
| CAACCTTCGACCTGACATAC+AGG | + | chr2_4:58136790-58136809 | Msa0338000:five_prime_UTR | 50.0% | |
| GTACCTGTATGTCAGGTCGA+AGG | - | chr2_4:58136796-58136815 | None:intergenic | 50.0% | |
| TCGACCTGACATACAGGTAC+TGG | + | chr2_4:58136796-58136815 | Msa0338000:five_prime_UTR | 50.0% | |
| CAGTCCAGTACCTGTATGTC+AGG | - | chr2_4:58136803-58136822 | None:intergenic | 50.0% | |
| GGTGGACGACACAATGTTTG+AGG | + | chr2_4:58136904-58136923 | Msa0338000:CDS | 50.0% | |
| GGTGATATAGCACTGCATCG+TGG | + | chr2_4:58137101-58137120 | Msa0338000:intron | 50.0% | |
| ACAGACCAGGGTTCAAACTC+TGG | - | chr2_4:58137473-58137492 | None:intergenic | 50.0% | |
| TCATACTTGTCGTAGGGGGT+TGG | - | chr2_4:58137534-58137553 | None:intergenic | 50.0% | |
| ACAGGGGTAGCACATGAAGA+TGG | - | chr2_4:58137755-58137774 | None:intergenic | 50.0% | |
| GCTACCCCTGTATTGCCTAT+AGG | + | chr2_4:58137764-58137783 | Msa0338000:CDS | 50.0% | |
| AAACCGCGGTATTCCCGTAT+TGG | + | chr2_4:58138204-58138223 | Msa0338000:CDS | 50.0% | |
| CAACCAATACGGGAATACCG+CGG | - | chr2_4:58138210-58138229 | None:intergenic | 50.0% | |
| ACAATCGCTGTGTCTCATCC+AGG | + | chr2_4:58138441-58138460 | Msa0338000:CDS | 50.0% | |
| CAAGTCGTTGTCTTGTCTCG+TGG | - | chr2_4:58138805-58138824 | None:intergenic | 50.0% | |
| AGACAACGACTTGAAGCTCG+AGG | + | chr2_4:58138812-58138831 | Msa0338000:CDS | 50.0% | |
| GCTCGAGGAAGTTTGTGTCA+TGG | + | chr2_4:58138827-58138846 | Msa0338000:CDS | 50.0% | |
| GAGACATCATCCTGCGAAGT+TGG | - | chr2_4:58139115-58139134 | None:intergenic | 50.0% | |
| CACCTACAACATGATCACCG+TGG | - | chr2_4:58139166-58139185 | None:intergenic | 50.0% | |
| CACGGTGATCATGTTGTAGG+TGG | + | chr2_4:58139164-58139183 | Msa0338000:exon | 50.0% | |
| ! | GCACCAAAGATAATGGCCCT+TGG | + | chr2_4:58139214-58139233 | Msa0338000:three_prime_UTR | 50.0% |
| CCGACCTCCTCTTCAAAGAG+TGG | - | chr2_4:58135977-58135996 | None:intergenic | 55.0% | |
| CTTGAGGCAATCAATCCCCC+TGG | - | chr2_4:58136039-58136058 | None:intergenic | 55.0% | |
| AAGTACACCTGTCGGACACC+TGG | - | chr2_4:58136155-58136174 | None:intergenic | 55.0% | |
| CGTGGCCAAATGTGTGTCCA+TGG | + | chr2_4:58136333-58136352 | Msa0338000:intron | 55.0% | |
| ACCAAGCTTCTGCGGCAATG+TGG | + | chr2_4:58136388-58136407 | Msa0338000:intron | 55.0% | |
| ACCACATTGCCGCAGAAGCT+TGG | - | chr2_4:58136392-58136411 | None:intergenic | 55.0% | |
| ACATTGTGTCGTCCACCTCC+AGG | - | chr2_4:58136901-58136920 | None:intergenic | 55.0% | |
| GCACTGCATCGTGGCAGAAT+TGG | + | chr2_4:58137110-58137129 | Msa0338000:intron | 55.0% | |
| GGGGTAGCACATGAAGATGG+AGG | - | chr2_4:58137752-58137771 | None:intergenic | 55.0% | |
| TGAGTGCTCGGTTGATCGCT+TGG | - | chr2_4:58137864-58137883 | None:intergenic | 55.0% | |
| ! | GCGACTTCACTGGCTGTCTT+CGG | - | chr2_4:58138022-58138041 | None:intergenic | 55.0% |
| GCACGGACACTCCTCGGATT+AGG | + | chr2_4:58136124-58136143 | Msa0338000:intron | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+AGG | + | chr2_4:58136134-58136153 | Msa0338000:intron | 60.0% |
| ACCTGGACACGCCTAATCCG+AGG | - | chr2_4:58136138-58136157 | None:intergenic | 60.0% | |
| ! | TCACTGGCTGTCTTCGGTGC+AGG | - | chr2_4:58138016-58138035 | None:intergenic | 60.0% |
| GGCGTGTCCAGGTGTCCGAC+AGG | + | chr2_4:58136145-58136164 | Msa0338000:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 58135732 | 58139388 | 58135732 | ID=Msa0338000;Name=Msa0338000 |
| chr2_4 | mRNA | 58135732 | 58139388 | 58135732 | ID=Msa0338000-mRNA-1;Parent=Msa0338000;Name=Msa0338000-mRNA-1;_AED=0.05;_eAED=0.05;_QI=133|1|1|1|0.6|0.5|6|217|365 |
| chr2_4 | exon | 58135732 | 58135789 | 58135732 | ID=Msa0338000-mRNA-1:exon:17789;Parent=Msa0338000-mRNA-1 |
| chr2_4 | exon | 58136776 | 58136925 | 58136776 | ID=Msa0338000-mRNA-1:exon:17790;Parent=Msa0338000-mRNA-1 |
| chr2_4 | exon | 58137662 | 58138289 | 58137662 | ID=Msa0338000-mRNA-1:exon:17791;Parent=Msa0338000-mRNA-1 |
| chr2_4 | exon | 58138394 | 58138462 | 58138394 | ID=Msa0338000-mRNA-1:exon:17792;Parent=Msa0338000-mRNA-1 |
| chr2_4 | exon | 58138766 | 58138908 | 58138766 | ID=Msa0338000-mRNA-1:exon:17793;Parent=Msa0338000-mRNA-1 |
| chr2_4 | exon | 58138989 | 58139388 | 58138989 | ID=Msa0338000-mRNA-1:exon:17794;Parent=Msa0338000-mRNA-1 |
| chr2_4 | five_prime_UTR | 58135732 | 58135789 | 58135732 | ID=Msa0338000-mRNA-1:five_prime_utr;Parent=Msa0338000-mRNA-1 |
| chr2_4 | five_prime_UTR | 58136776 | 58136850 | 58136776 | ID=Msa0338000-mRNA-1:five_prime_utr;Parent=Msa0338000-mRNA-1 |
| chr2_4 | CDS | 58136851 | 58136925 | 58136851 | ID=Msa0338000-mRNA-1:cds;Parent=Msa0338000-mRNA-1 |
| chr2_4 | CDS | 58137662 | 58138289 | 58137662 | ID=Msa0338000-mRNA-1:cds;Parent=Msa0338000-mRNA-1 |
| chr2_4 | CDS | 58138394 | 58138462 | 58138394 | ID=Msa0338000-mRNA-1:cds;Parent=Msa0338000-mRNA-1 |
| chr2_4 | CDS | 58138766 | 58138908 | 58138766 | ID=Msa0338000-mRNA-1:cds;Parent=Msa0338000-mRNA-1 |
| chr2_4 | CDS | 58138989 | 58139171 | 58138989 | ID=Msa0338000-mRNA-1:cds;Parent=Msa0338000-mRNA-1 |
| chr2_4 | three_prime_UTR | 58139172 | 58139388 | 58139172 | ID=Msa0338000-mRNA-1:three_prime_utr;Parent=Msa0338000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
