Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532170 | XP_039684908.1 | 75.000 | 428 | 55 | 2 | 51 | 426 | 5 | 432 | 0.0 | 591 |
| Msa0532170 | XP_039684908.1 | 86.111 | 900 | 62 | 4 | 1 | 899 | 6 | 843 | 0.0 | 1496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532170 | A0A396GNM2 | 86.000 | 900 | 62 | 5 | 1 | 899 | 1 | 837 | 0.0 | 1488 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0532170 | 0.819063 | 1.413589e-52 | -8.615850e-47 |
| Msa0055040 | Msa0532170 | 0.802603 | 5.187351e-49 | -8.615850e-47 |
| Msa0068680 | Msa0532170 | 0.807128 | 5.880000e-50 | -8.615850e-47 |
| Msa0077610 | Msa0532170 | 0.830317 | 3.142971e-55 | -8.615850e-47 |
| Msa0077670 | Msa0532170 | 0.801175 | 1.019443e-48 | -8.615850e-47 |
| Msa0101810 | Msa0532170 | -0.821515 | 3.875992e-53 | -8.615850e-47 |
| Msa0140780 | Msa0532170 | 0.819920 | 9.012968e-53 | -8.615850e-47 |
| Msa0157290 | Msa0532170 | 0.818943 | 1.505520e-52 | -8.615850e-47 |
| Msa0157310 | Msa0532170 | 0.831582 | 1.538686e-55 | -8.615850e-47 |
| Msa0179580 | Msa0532170 | 0.837834 | 4.114391e-57 | -8.615850e-47 |
| Msa0188830 | Msa0532170 | 0.820486 | 6.687889e-53 | -8.615850e-47 |
| Msa0200260 | Msa0532170 | 0.801188 | 1.012975e-48 | -8.615850e-47 |
| Msa0216910 | Msa0532170 | 0.823148 | 1.618932e-53 | -8.615850e-47 |
| Msa0220580 | Msa0532170 | 0.805476 | 1.310857e-49 | -8.615850e-47 |
| Msa0237660 | Msa0532170 | 0.838425 | 2.897433e-57 | -8.615850e-47 |
| Msa0393080 | Msa0532170 | 0.807943 | 3.948475e-50 | -8.615850e-47 |
| Msa0440750 | Msa0532170 | 0.812327 | 4.482601e-51 | -8.615850e-47 |
| Msa0243100 | Msa0532170 | 0.811991 | 5.305930e-51 | -8.615850e-47 |
| Msa0265380 | Msa0532170 | 0.801250 | 9.837870e-49 | -8.615850e-47 |
| Msa0287650 | Msa0532170 | 0.817454 | 3.270786e-52 | -8.615850e-47 |
| Msa0291540 | Msa0532170 | 0.810072 | 1.382529e-50 | -8.615850e-47 |
| Msa0338000 | Msa0532170 | 0.831996 | 1.216173e-55 | -8.615850e-47 |
| Msa0345970 | Msa0532170 | 0.823768 | 1.159469e-53 | -8.615850e-47 |
| Msa0488560 | Msa0532170 | 0.803883 | 2.818226e-49 | -8.615850e-47 |
| Msa0515010 | Msa0532170 | 0.802229 | 6.195317e-49 | -8.615850e-47 |
| Msa0532060 | Msa0532170 | 0.990806 | 2.043968e-184 | -8.615850e-47 |
| Msa0532170 | Msa0536220 | 0.806670 | 7.349187e-50 | -8.615850e-47 |
| Msa0532170 | Msa0555020 | 0.820397 | 7.008122e-53 | -8.615850e-47 |
| Msa0532170 | Msa0590840 | 0.802149 | 6.432751e-49 | -8.615850e-47 |
| Msa0532170 | Msa0621490 | 0.804236 | 2.379590e-49 | -8.615850e-47 |
| Msa0532170 | Msa0648880 | 0.827199 | 1.785249e-54 | -8.615850e-47 |
| Msa0532170 | Msa0657610 | 0.802463 | 5.543952e-49 | -8.615850e-47 |
| Msa0532170 | Msa0657970 | 0.813019 | 3.163725e-51 | -8.615850e-47 |
| Msa0532170 | Msa0669440 | 0.803902 | 2.792913e-49 | -8.615850e-47 |
| Msa0532170 | Msa0691380 | 0.840326 | 9.301353e-58 | -8.615850e-47 |
| Msa0532170 | Msa0701900 | 0.828555 | 8.423089e-55 | -8.615850e-47 |
| Msa0532170 | Msa0702740 | 0.810008 | 1.426693e-50 | -8.615850e-47 |
| Msa0532170 | Msa0790510 | 0.804542 | 2.054602e-49 | -8.615850e-47 |
| Msa0532170 | Msa0796700 | 0.816170 | 6.349039e-52 | -8.615850e-47 |
| Msa0532170 | Msa0845400 | 0.845731 | 3.382621e-59 | -8.615850e-47 |
| Msa0532170 | Msa0867890 | 0.800594 | 1.339733e-48 | -8.615850e-47 |
| Msa0532170 | Msa0880140 | 0.819088 | 1.395210e-52 | -8.615850e-47 |
| Msa0532170 | Msa0922330 | 0.802510 | 5.422332e-49 | -8.615850e-47 |
| Msa0532170 | Msa0923540 | 0.807366 | 5.235604e-50 | -8.615850e-47 |
| Msa0532170 | Msa1018100 | 0.834463 | 2.953738e-56 | -8.615850e-47 |
| Msa0532170 | Msa1044420 | 0.826674 | 2.382660e-54 | -8.615850e-47 |
| Msa0532170 | Msa1045200 | 0.806648 | 7.427259e-50 | -8.615850e-47 |
| Msa0532170 | Msa1075220 | -0.803047 | 4.199384e-49 | -8.615850e-47 |
| Msa0532170 | Msa1116130 | -0.821710 | 3.493536e-53 | -8.615850e-47 |
| Msa0532170 | Msa1124050 | 0.820440 | 6.850482e-53 | -8.615850e-47 |
| Msa0532170 | Msa1157930 | -0.819512 | 1.116977e-52 | -8.615850e-47 |
| Msa0532170 | Msa1169090 | 0.824858 | 6.426094e-54 | -8.615850e-47 |
| Msa0532170 | Msa1203250 | 0.809406 | 1.922533e-50 | -8.615850e-47 |
| Msa0532170 | Msa1239720 | 0.810947 | 8.947560e-51 | -8.615850e-47 |
| Msa0532170 | Msa1270610 | 0.827231 | 1.753302e-54 | -8.615850e-47 |
| Msa0532170 | Msa1271280 | 0.800066 | 1.715925e-48 | -8.615850e-47 |
| Msa0532170 | Msa1271300 | 0.831346 | 1.758211e-55 | -8.615850e-47 |
| Msa0532170 | Msa1283840 | 0.804659 | 1.942917e-49 | -8.615850e-47 |
| Msa0532170 | Msa1283860 | 0.819093 | 1.391994e-52 | -8.615850e-47 |
| Msa0532170 | Msa1284260 | 0.816864 | 4.437677e-52 | -8.615850e-47 |
| Msa0532170 | Msa1322860 | 0.819171 | 1.336228e-52 | -8.615850e-47 |
| Msa0532170 | Msa1322890 | 0.815837 | 7.534805e-52 | -8.615850e-47 |
| Msa0532170 | Msa1327050 | 0.830667 | 2.581199e-55 | -8.615850e-47 |
| Msa0532170 | Msa1327680 | 0.827093 | 1.892671e-54 | -8.615850e-47 |
| Msa0532170 | Msa1346370 | 0.802955 | 4.388063e-49 | -8.615850e-47 |
| Msa0532170 | Msa1384350 | 0.806034 | 1.000807e-49 | -8.615850e-47 |
| Msa0532170 | Msa1392260 | 0.812365 | 4.398415e-51 | -8.615850e-47 |
| Msa0532170 | Msa1427820 | 0.802656 | 5.059250e-49 | -8.615850e-47 |
| Msa0532170 | Msa1429900 | 0.815937 | 7.157690e-52 | -8.615850e-47 |
| Msa0532170 | Msa1461360 | 0.801586 | 8.394872e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532170 | MtrunA17_Chr8g0380341 | 86.000 | 900 | 62 | 5 | 1 | 899 | 1 | 837 | 0.0 | 1488 |
| Msa0532170 | MtrunA17_Chr1g0206371 | 45.909 | 220 | 98 | 3 | 501 | 719 | 35 | 234 | 5.18e-54 | 187 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 224 sgRNAs with CRISPR-Local
Find 636 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGATGTCTTATTATTAA+TGG | 0.147847 | 4_1:-6162603 | Msa0532170:intron |
| CTTCCCAACCACCGACTTAA+AGG | 0.208074 | 4_1:+6159947 | None:intergenic |
| CGCTAGGAGCATCTATGTTT+TGG | 0.227456 | 4_1:-6159295 | Msa0532170:three_prime_UTR |
| AAGATGTGATAACAGATATT+AGG | 0.229248 | 4_1:-6159471 | Msa0532170:CDS |
| TTAAATTGAAATAATTTCTA+TGG | 0.263337 | 4_1:-6166912 | Msa0532170:five_prime_UTR |
| ATGAAAATGAAAGCAGAAAA+TGG | 0.263656 | 4_1:+6167027 | None:intergenic |
| CGATCTCTCAAATTTCTCTT+TGG | 0.266239 | 4_1:+6165290 | None:intergenic |
| TTTGATTTATCATGTAAATA+TGG | 0.274747 | 4_1:-6159366 | Msa0532170:three_prime_UTR |
| TCAACTTCAAATTCATTTGA+TGG | 0.278093 | 4_1:+6164476 | None:intergenic |
| ATGGTACCTGAAAATGAATT+TGG | 0.279902 | 4_1:+6166802 | None:intergenic |
| TCATTACAAATATTGCTAAA+TGG | 0.287507 | 4_1:+6159143 | None:intergenic |
| TGATAATCCATCAAATGATT+TGG | 0.297456 | 4_1:-6164106 | Msa0532170:CDS |
| CATTCTCTGCCTCCACCCTT+TGG | 0.298562 | 4_1:+6159838 | None:intergenic |
| TTCAATGGTTCTATAGTTCA+TGG | 0.308159 | 4_1:-6162470 | Msa0532170:CDS |
| TGATAATATATCAAATGAAT+TGG | 0.317818 | 4_1:-6165580 | Msa0532170:CDS |
| CAATCATATATGCAGGGTTT+TGG | 0.318781 | 4_1:-6159924 | Msa0532170:CDS |
| TGATAACCCATCAAATGAAT+TGG | 0.321881 | 4_1:-6165204 | Msa0532170:CDS |
| AGCCTGATTTGCAGACATTA+TGG | 0.326446 | 4_1:-6160221 | Msa0532170:CDS |
| CTCTTGCTTCTCTACAAACT+TGG | 0.328148 | 4_1:+6164819 | None:intergenic |
| AGCTAGATATCGCTTGTATT+AGG | 0.333158 | 4_1:-6159440 | Msa0532170:exon |
| CAGAAAATGGCTCAAGTAAC+GGG | 0.333349 | 4_1:+6167040 | None:intergenic |
| TAATAATCCATCATTTGAAT+TGG | 0.339315 | 4_1:-6166692 | Msa0532170:CDS |
| GGCCTTAGTTTACTAAAATC+TGG | 0.343168 | 4_1:+6167062 | None:intergenic |
| TTTGAATTGGAAGTTGATCT+TGG | 0.349340 | 4_1:-6166679 | Msa0532170:CDS |
| ATGGCAGATAACACACAAAA+AGG | 0.350267 | 4_1:-6160202 | Msa0532170:CDS |
| TGCCATAATGTCTGCAAATC+AGG | 0.351649 | 4_1:+6160219 | None:intergenic |
| TTCAGAAGACTTGACGCTTT+AGG | 0.351852 | 4_1:+6166754 | None:intergenic |
| ATTCTCTGCCTCCACCCTTT+GGG | 0.352470 | 4_1:+6159839 | None:intergenic |
| TTCAAAAGACTTGACGCTTT+AGG | 0.353871 | 4_1:+6164913 | None:intergenic |
| GGAGAATCAATCAAATGAAT+TGG | 0.357053 | 4_1:-6163609 | Msa0532170:CDS |
| TCAACTTCCAATTCATTTGA+TGG | 0.360973 | 4_1:+6165197 | None:intergenic |
| GCAACTTCCAACTCATTTGA+TGG | 0.361666 | 4_1:+6163653 | None:intergenic |
| TTCTGAAGACTTGACACTTT+AGG | 0.365515 | 4_1:+6163722 | None:intergenic |
| TTCTGAAGAGTAGACGCTTT+AGG | 0.365624 | 4_1:+6165266 | None:intergenic |
| TGCTGAAGACTTGACGCTTT+AGG | 0.365823 | 4_1:+6166021 | None:intergenic |
| TTCTGAAGACTTGACGCTTT+AGG | 0.367145 | 4_1:+6165642 | None:intergenic |
| TTCTGATTCATTGACCCTCT+TGG | 0.369587 | 4_1:+6162535 | None:intergenic |
| TGAGTCTGATTGGAAATTCT+TGG | 0.369640 | 4_1:-6160561 | Msa0532170:CDS |
| TCAACTTCCAAATCATTTGA+TGG | 0.372340 | 4_1:+6164099 | None:intergenic |
| TCAGACTCATTGACGTCATC+AGG | 0.373190 | 4_1:+6160575 | None:intergenic |
| TTCTGAAGACTTGACACTTT+AGG | 0.373672 | 4_1:+6164545 | None:intergenic |
| ATGAAGCAGGCCGTTTATAT+CGG | 0.376195 | 4_1:-6160667 | Msa0532170:CDS |
| GGTAGAAATATGTTAGCTAT+AGG | 0.377788 | 4_1:-6166987 | Msa0532170:five_prime_UTR |
| TCCAGTCTACTAGTGACATT+AGG | 0.379208 | 4_1:+6159230 | None:intergenic |
| TTCTGAAGACTTGACGCTTT+AGG | 0.380718 | 4_1:+6164168 | None:intergenic |
| GGACTCGACCTCAACAAGTT+TGG | 0.381644 | 4_1:+6159788 | None:intergenic |
| ATGTAAATATGGTTTACATT+TGG | 0.381800 | 4_1:-6159355 | Msa0532170:three_prime_UTR |
| TCTTAAACTTCTCTTTGAAA+TGG | 0.394970 | 4_1:+6164574 | None:intergenic |
| TCAACTTCCAATTCAAATGA+TGG | 0.401502 | 4_1:+6166685 | None:intergenic |
| TTCCATCTGCATTCTGTGGA+TGG | 0.403194 | 4_1:+6162509 | None:intergenic |
| AGATGTGATAACAGATATTA+GGG | 0.404825 | 4_1:-6159470 | Msa0532170:CDS |
| TTCTATAGTTCATGGCTTTG+AGG | 0.408658 | 4_1:-6162462 | Msa0532170:CDS |
| TCCTGCTCCTCTACAGAGTC+AGG | 0.409851 | 4_1:+6163578 | None:intergenic |
| GCTCGTTTGAAGCACTGTTA+TGG | 0.410700 | 4_1:+6166889 | None:intergenic |
| CCGTCGCTCCTCTGCCAGTT+GGG | 0.412391 | 4_1:+6159767 | None:intergenic |
| TTTAGAATTGTTAATGCAAA+GGG | 0.415662 | 4_1:-6162569 | Msa0532170:CDS |
| TCCACTTGTTCACATTAAAA+CGG | 0.416746 | 4_1:+6162210 | None:intergenic |
| TTTGTAGAGGAGCAAGAAAT+AGG | 0.423982 | 4_1:-6165167 | Msa0532170:intron |
| ATTTCAAAGAGAAGTTTAAG+AGG | 0.428244 | 4_1:-6164572 | Msa0532170:CDS |
| TATCTGAAGCAAAATACAAT+AGG | 0.430499 | 4_1:+6162414 | None:intergenic |
| TTTGTAGAGGAGCAGGCAAC+AGG | 0.431641 | 4_1:-6164446 | Msa0532170:intron |
| TGGTACCTGAAAATGAATTT+GGG | 0.434994 | 4_1:+6166803 | None:intergenic |
| GATCAGTAATGAAGTCATTA+CGG | 0.436319 | 4_1:+6162258 | None:intergenic |
| AGGTTCCATGGCAAAGAGAA+AGG | 0.437723 | 4_1:-6163756 | Msa0532170:CDS |
| CCAGTCTACTAGTGACATTA+GGG | 0.439775 | 4_1:+6159231 | None:intergenic |
| TCCTGCTCCTCTACAAGCTC+AGG | 0.439898 | 4_1:+6165549 | None:intergenic |
| TTGAATTGGAAGTTGATCTT+GGG | 0.441555 | 4_1:-6166678 | Msa0532170:CDS |
| AGGCTGGTGGCTGTAGGTCC+AGG | 0.443742 | 4_1:-6162281 | Msa0532170:CDS |
| TTATCACATCTTCCGCCTCA+TGG | 0.446333 | 4_1:+6159482 | None:intergenic |
| CCACTTGTTCACATTAAAAC+GGG | 0.448981 | 4_1:+6162211 | None:intergenic |
| TCTTGGGTTTGTAGAGGAGC+AGG | 0.450818 | 4_1:-6166662 | Msa0532170:CDS |
| TCCTGAGCTTGTAGAGGAGC+AGG | 0.454298 | 4_1:-6165550 | Msa0532170:CDS |
| GATGGATTATTAAGAACAAC+CGG | 0.455190 | 4_1:+6166703 | None:intergenic |
| TTGTTAATGCAAAGGGGACC+AGG | 0.457044 | 4_1:-6162562 | Msa0532170:CDS |
| CAAAGAGAAGTTTAAGAGGT+AGG | 0.460609 | 4_1:-6164568 | Msa0532170:CDS |
| CTGCCTTTAAGTCGGTGGTT+GGG | 0.460613 | 4_1:-6159950 | Msa0532170:CDS |
| TTTGTAGAGGAGCAGGGGAC+AGG | 0.460722 | 4_1:-6166655 | Msa0532170:intron |
| CTTGTAGAGGAGCAGGAGAC+AGG | 0.461686 | 4_1:-6165543 | Msa0532170:intron |
| TAACAGCGGGACCCTGTGAC+TGG | 0.462835 | 4_1:-6160249 | Msa0532170:intron |
| AGGAATTTGCTTTAAACTCT+CGG | 0.464987 | 4_1:-6159325 | Msa0532170:three_prime_UTR |
| GGTTTACATTTGGAGTATGT+AGG | 0.465457 | 4_1:-6159345 | Msa0532170:three_prime_UTR |
| ATATAATACATATGCTTTCA+TGG | 0.465908 | 4_1:+6166854 | None:intergenic |
| TCCTGCTCCTCTACAACGTC+AGG | 0.466617 | 4_1:+6163629 | None:intergenic |
| TCCGTCGCTCCTCTGCCAGT+TGG | 0.466866 | 4_1:+6159766 | None:intergenic |
| TCAACTTCTAATTCATTCGA+TGG | 0.467657 | 4_1:+6164844 | None:intergenic |
| TTGGTAGAGCAGCAGGTGAC+AGG | 0.469637 | 4_1:-6165922 | Msa0532170:intron |
| AGGTACCATGGCAAAGAGAA+AGG | 0.469697 | 4_1:-6164947 | Msa0532170:CDS |
| AGGTACCATGGCAAAGAGAA+AGG | 0.469697 | 4_1:-6166788 | Msa0532170:exon |
| AGTGTCAAGTCTTCAGAAGC+AGG | 0.470712 | 4_1:-6164540 | Msa0532170:CDS |
| TGAGGATGAGGTGGAAGTAA+TGG | 0.470828 | 4_1:-6159976 | Msa0532170:CDS |
| TCCTGACTCTGTAGAGGAGC+AGG | 0.473160 | 4_1:-6163579 | Msa0532170:CDS |
| TTGCTTCAGATACAAGAGTC+AGG | 0.473273 | 4_1:-6162403 | Msa0532170:CDS |
| TCTTCCCTTTCTCTTTGCCA+TGG | 0.473899 | 4_1:+6163751 | None:intergenic |
| ATTGACCCTCTTGGTCGCCC+TGG | 0.474038 | 4_1:+6162544 | None:intergenic |
| TCTTGAGTTTGTAGAGGAGC+AGG | 0.474752 | 4_1:-6164453 | Msa0532170:CDS |
| ACAGAGAGCAAATGTCAAAT+CGG | 0.476160 | 4_1:-6165989 | Msa0532170:CDS |
| ACACAGTGCAAGTGTCGAAC+CGG | 0.477791 | 4_1:-6166722 | Msa0532170:CDS |
| CAACTTCCAATTCATTTGAT+GGG | 0.479734 | 4_1:+6165198 | None:intergenic |
| TCAGGCTCCTTTCCAGTCAC+AGG | 0.480785 | 4_1:+6160237 | None:intergenic |
| AGCGTCAAGTCTTCTGAAGA+AGG | 0.484194 | 4_1:-6166749 | Msa0532170:CDS |
| TACAAGTGGAAGAGCAGCTA+GGG | 0.485047 | 4_1:+6160876 | None:intergenic |
| GATGGATTATCAAGAACAAC+CGG | 0.485164 | 4_1:+6164117 | None:intergenic |
| AGCGTCAAGTCTTCAGAAGA+AGG | 0.486366 | 4_1:-6165637 | Msa0532170:CDS |
| TCTTGCTTCTCTACAAACTT+GGG | 0.486475 | 4_1:+6164820 | None:intergenic |
| TCTGTAGAGGAGCAGGAGAC+AGG | 0.487186 | 4_1:-6163572 | Msa0532170:intron |
| TCTTCCCTTTCTCTTTGCCA+TGG | 0.488381 | 4_1:+6164942 | None:intergenic |
| TCTTCCCTTTCTCTTTGCCA+TGG | 0.488381 | 4_1:+6166783 | None:intergenic |
| AACTTTCCATCTGCATTCTG+TGG | 0.489319 | 4_1:+6162505 | None:intergenic |
| TCCTGAGTTGGTAGAGCAGC+AGG | 0.491712 | 4_1:-6165929 | Msa0532170:CDS |
| AGCGTCAAGTCTTCAGAAGC+AGG | 0.491830 | 4_1:-6164163 | Msa0532170:CDS |
| GTCATCAGGGATATGCTTCA+AGG | 0.491897 | 4_1:+6160589 | None:intergenic |
| AGTGTCAAGTCTTCAGAAGA+AGG | 0.492126 | 4_1:-6163717 | Msa0532170:CDS |
| TGGGAAGCAATCATATATGC+AGG | 0.493010 | 4_1:-6159931 | Msa0532170:CDS |
| TGTTGAGGTCGAGTCCCAAC+TGG | 0.495312 | 4_1:-6159781 | Msa0532170:CDS |
| TCCTGACGTTGTAGAGGAGC+AGG | 0.496741 | 4_1:-6163630 | Msa0532170:CDS |
| CCCTAATGTCACTAGTAGAC+TGG | 0.496886 | 4_1:-6159231 | Msa0532170:three_prime_UTR |
| TAATAATCCATCAAATGAGT+TGG | 0.498386 | 4_1:-6163660 | Msa0532170:CDS |
| AGGCGTAAGAATAAAGTAAG+AGG | 0.500263 | 4_1:-6162383 | Msa0532170:CDS |
| AAAGAGTGCAAATGTCAAAC+CGG | 0.503507 | 4_1:-6164136 | Msa0532170:CDS |
| TATGCAGGAAATCAACAGTC+AGG | 0.507449 | 4_1:-6159700 | Msa0532170:CDS |
| TGTTCGAGTTCAAGAGCTGC+AGG | 0.507588 | 4_1:-6159874 | Msa0532170:CDS |
| TTCAAGATACAGATGTGGTT+CGG | 0.507876 | 4_1:-6160703 | Msa0532170:CDS |
| TATATCGGAGTCGGCGCCAC+AGG | 0.507889 | 4_1:-6160652 | Msa0532170:CDS |
| ATTGCAAAGAGAAAGTTAAG+AGG | 0.508898 | 4_1:-6164195 | Msa0532170:CDS |
| TCTTAACTTTCTCTTTGCCA+TGG | 0.510685 | 4_1:+6166050 | None:intergenic |
| TCTTGCTCCTCTACAAACTC+AGG | 0.513274 | 4_1:+6165173 | None:intergenic |
| AGCGTCTACTCTTCAGAAGA+AGG | 0.514021 | 4_1:-6165261 | Msa0532170:CDS |
| ATGACGTCAATGAGTCTGAT+TGG | 0.514502 | 4_1:-6160571 | Msa0532170:CDS |
| AATCAATATACCTCAAAAGA+AGG | 0.514859 | 4_1:+6160521 | None:intergenic |
| CTCATTAACCCACTCCCCAT+TGG | 0.514976 | 4_1:+6160179 | None:intergenic |
| ACTGCCTTTAAGTCGGTGGT+TGG | 0.517338 | 4_1:-6159951 | Msa0532170:CDS |
| TTTGTAGAGAAGCAAGAGAC+AGG | 0.517788 | 4_1:-6164814 | Msa0532170:intron |
| CAATGGGGAGTGGGTTAATG+AGG | 0.519160 | 4_1:-6160178 | Msa0532170:CDS |
| GGTTCCATGGCAAAGAGAAA+GGG | 0.524638 | 4_1:-6163755 | Msa0532170:CDS |
| CAAAGAGAAATTTAAGAGAT+CGG | 0.525583 | 4_1:-6165665 | Msa0532170:CDS |
| GGGTGGAGGCAGAGAATGCT+AGG | 0.531465 | 4_1:-6159833 | Msa0532170:CDS |
| CAAAGAGAAATTTGAGAGAT+CGG | 0.538439 | 4_1:-6165289 | Msa0532170:CDS |
| GGCTGAATTAGATGCCCAAA+GGG | 0.538742 | 4_1:-6159853 | Msa0532170:CDS |
| CCTACGAGGCTGGTGGCTGT+AGG | 0.539947 | 4_1:-6162287 | Msa0532170:CDS |
| AAGTACTAAAGATACTATAG+TGG | 0.543254 | 4_1:-6162174 | Msa0532170:CDS |
| AATATTGAGACAATGCTGAC+TGG | 0.546405 | 4_1:+6159664 | None:intergenic |
| GCTAGAGAATTCTGAGGATG+AGG | 0.546881 | 4_1:-6159988 | Msa0532170:CDS |
| GCAGAAAATGGCTCAAGTAA+CGG | 0.547182 | 4_1:+6167039 | None:intergenic |
| GGGGACCAGGGCGACCAAGA+GGG | 0.547401 | 4_1:-6162549 | Msa0532170:CDS |
| TTACTTAAAATTTGAAACAA+AGG | 0.548318 | 4_1:-6160618 | Msa0532170:CDS |
| TCTTAACTTTCTCTTTGCAA+TGG | 0.548391 | 4_1:+6164197 | None:intergenic |
| ATCAAAGCTAGCTGCTTGAA+AGG | 0.550346 | 4_1:+6160361 | None:intergenic |
| GAGTTTGTAGAGGAGGAGAC+AGG | 0.551866 | 4_1:-6164072 | Msa0532170:intron |
| AACCATCCACAGAATGCAGA+TGG | 0.554928 | 4_1:-6162511 | Msa0532170:CDS |
| AGCGTCAAGTCTTCAGCAGA+TGG | 0.555256 | 4_1:-6166016 | Msa0532170:CDS |
| TGATCCCGAGTTTGTAGAGG+AGG | 0.555539 | 4_1:-6164079 | Msa0532170:CDS |
| ACTGAGTCGAGATGGAAAGT+TGG | 0.556259 | 4_1:-6162324 | Msa0532170:CDS |
| ACAGAGCGCAAATGTCAAAA+CGG | 0.556630 | 4_1:-6164513 | Msa0532170:CDS |
| GTCTCCTCCTCTACAAACTC+GGG | 0.557059 | 4_1:+6164075 | None:intergenic |
| TGTCTCCTCCTCTACAAACT+CGG | 0.559934 | 4_1:+6164074 | None:intergenic |
| GGTACCATGGCAAAGAGAAA+GGG | 0.560767 | 4_1:-6164946 | Msa0532170:CDS |
| GGTACCATGGCAAAGAGAAA+GGG | 0.560767 | 4_1:-6166787 | Msa0532170:exon |
| CCCAACTGGCAGAGGAGCGA+CGG | 0.564166 | 4_1:-6159767 | Msa0532170:CDS |
| CAGAACAAATGGAGCTTCTG+CGG | 0.564418 | 4_1:+6160843 | None:intergenic |
| GTACAAGTGGAAGAGCAGCT+AGG | 0.564812 | 4_1:+6160875 | None:intergenic |
| AGGGGACCAGGGCGACCAAG+AGG | 0.568832 | 4_1:-6162550 | Msa0532170:CDS |
| CAAAGAGAAAGTTAAGAGGT+AGG | 0.570257 | 4_1:-6164191 | Msa0532170:CDS |
| AAGGCGATTATCGATGAAGC+AGG | 0.570651 | 4_1:-6160680 | Msa0532170:CDS |
| AGTTGATCTTGGGTTTGTAG+AGG | 0.572021 | 4_1:-6166668 | Msa0532170:CDS |
| ATTAAGAGCCAAACTTGTTG+AGG | 0.572539 | 4_1:-6159796 | Msa0532170:CDS |
| CTTGGGTTTGTAGAGGAGCA+GGG | 0.572912 | 4_1:-6166661 | Msa0532170:CDS |
| GGTCGAGTCCCAACTGGCAG+AGG | 0.576269 | 4_1:-6159775 | Msa0532170:CDS |
| AAGCGTAAACTGAGTCGAGA+TGG | 0.581874 | 4_1:-6162332 | Msa0532170:CDS |
| ACAAAATCAACTGCACAAGC+AGG | 0.583911 | 4_1:+6159207 | None:intergenic |
| TGATATTCATCCTACGAGGC+TGG | 0.584829 | 4_1:-6162297 | Msa0532170:CDS |
| ACCTGCTGCTCTACCAACTC+AGG | 0.584977 | 4_1:+6165928 | None:intergenic |
| ACGGAAACGAGAGGAGAGTG+AGG | 0.586157 | 4_1:-6159748 | Msa0532170:CDS |
| ATTAGATGCCCAAAGGGTGG+AGG | 0.590973 | 4_1:-6159847 | Msa0532170:CDS |
| TCTTAAATTTCTCTTTGACA+TGG | 0.592523 | 4_1:+6165671 | None:intergenic |
| CAAAGAGAAAGTTAAGAGAT+CGG | 0.594814 | 4_1:-6166044 | Msa0532170:CDS |
| AGATACAGATGTGGTTCGGA+AGG | 0.597957 | 4_1:-6160699 | Msa0532170:CDS |
| GTGTCAAGTCTTCAGAAGCA+GGG | 0.598010 | 4_1:-6164539 | Msa0532170:CDS |
| GTAATGAAGTCATTACGGCC+TGG | 0.598380 | 4_1:+6162263 | None:intergenic |
| AGAGAATTCTGAGGATGAGG+TGG | 0.599063 | 4_1:-6159985 | Msa0532170:CDS |
| AGTTGATCTTGAGTTTGTAG+AGG | 0.600145 | 4_1:-6164459 | Msa0532170:CDS |
| AACTCTCGGAAGCATTCGCT+AGG | 0.600450 | 4_1:-6159311 | Msa0532170:three_prime_UTR |
| CAGCGGATACATCATACTAG+TGG | 0.602911 | 4_1:-6160392 | Msa0532170:CDS |
| AGTTGCTCCTGACGTTGTAG+AGG | 0.602942 | 4_1:-6163636 | Msa0532170:CDS |
| GGAAACTGCCTTTAAGTCGG+TGG | 0.602974 | 4_1:-6159955 | Msa0532170:CDS |
| AGTTGATCCCGAGTTTGTAG+AGG | 0.604279 | 4_1:-6164082 | Msa0532170:CDS |
| GCGGGACCCTGTGACTGGAA+AGG | 0.604650 | 4_1:-6160244 | Msa0532170:CDS |
| GGCGCCGACTCCGATATAAA+CGG | 0.605809 | 4_1:+6160657 | None:intergenic |
| CCTACAGCCACCAGCCTCGT+AGG | 0.606776 | 4_1:+6162287 | None:intergenic |
| CAGACTCATTGACGTCATCA+GGG | 0.607592 | 4_1:+6160576 | None:intergenic |
| AGAGGAGCGACGGAAACGAG+AGG | 0.611564 | 4_1:-6159757 | Msa0532170:CDS |
| AGATGATCCTGACTCTGTAG+AGG | 0.612790 | 4_1:-6163585 | Msa0532170:CDS |
| TTGAGACAATGCTGACTGGA+TGG | 0.620427 | 4_1:+6159668 | None:intergenic |
| TTGGGTTTGTAGAGGAGCAG+GGG | 0.620467 | 4_1:-6166660 | Msa0532170:CDS |
| GCGGAGACACAAAGTACAAG+TGG | 0.621120 | 4_1:+6160862 | None:intergenic |
| AAAGTAAGAGGACAAACAAG+AGG | 0.624934 | 4_1:-6162371 | Msa0532170:CDS |
| AGTTGATCCTGAGTTTGTAG+AGG | 0.626630 | 4_1:-6165180 | Msa0532170:CDS |
| AGCGGATACATCATACTAGT+GGG | 0.626746 | 4_1:-6160391 | Msa0532170:CDS |
| AATGGAAACTGCCTTTAAGT+CGG | 0.629497 | 4_1:-6159958 | Msa0532170:CDS |
| CAGGCTCCTTTCCAGTCACA+GGG | 0.631724 | 4_1:+6160238 | None:intergenic |
| ATTTGAAGTTGATCCTGAGT+TGG | 0.632233 | 4_1:-6165941 | Msa0532170:CDS |
| AGTTGATCCTGAGCTTGTAG+AGG | 0.632359 | 4_1:-6165556 | Msa0532170:CDS |
| GGGAAGCAATCATATATGCA+GGG | 0.632925 | 4_1:-6159930 | Msa0532170:CDS |
| AGGCTGAATTAGATGCCCAA+AGG | 0.633913 | 4_1:-6159854 | Msa0532170:CDS |
| GCTTTCATGGAGGAACACAT+AGG | 0.636769 | 4_1:+6166867 | None:intergenic |
| ATGGCAAAGAGAAAGGGAAG+AGG | 0.637485 | 4_1:-6166781 | Msa0532170:CDS |
| CAGGCCGTTTATATCGGAGT+CGG | 0.645550 | 4_1:-6160661 | Msa0532170:CDS |
| TATTCATCCTACGAGGCTGG+TGG | 0.646755 | 4_1:-6162294 | Msa0532170:CDS |
| AAGTAAGAGGACAAACAAGA+GGG | 0.650275 | 4_1:-6162370 | Msa0532170:CDS |
| ATGGCAAAGAGAAAGGGAAG+AGG | 0.656936 | 4_1:-6164940 | Msa0532170:CDS |
| TGTTAATGCAAAGGGGACCA+GGG | 0.658923 | 4_1:-6162561 | Msa0532170:CDS |
| TGAATTAGATGCCCAAAGGG+TGG | 0.663302 | 4_1:-6159850 | Msa0532170:CDS |
| CGCTTGTATTAGGAAAGTGA+AGG | 0.667054 | 4_1:-6159430 | Msa0532170:exon |
| CAAAGAGAAAGGGAAGATGT+CGG | 0.667696 | 4_1:-6163745 | Msa0532170:CDS |
| TGAAGCACAACTCCATGAGG+CGG | 0.667829 | 4_1:-6159494 | Msa0532170:CDS |
| GAGACTTCAAGATACAGATG+TGG | 0.668184 | 4_1:-6160708 | Msa0532170:CDS |
| TTAGAATTGTTAATGCAAAG+GGG | 0.668721 | 4_1:-6162568 | Msa0532170:CDS |
| AGAAAATGGCTCAAGTAACG+GGG | 0.677391 | 4_1:+6167041 | None:intergenic |
| CAAAGAGAAAGGGAAGAGGT+CGG | 0.681304 | 4_1:-6164936 | Msa0532170:CDS |
| AGTAATGCTCATGAAGCCTG+TGG | 0.683773 | 4_1:+6160636 | None:intergenic |
| GCTTGAAGCACAACTCCATG+AGG | 0.683823 | 4_1:-6159497 | Msa0532170:CDS |
| GAGTCTGCTAGAGAATTCTG+AGG | 0.685882 | 4_1:-6159994 | Msa0532170:CDS |
| TAATACATATGCTTTCATGG+AGG | 0.738702 | 4_1:+6166857 | None:intergenic |
| ATGTTGATATTCATCCTACG+AGG | 0.745737 | 4_1:-6162301 | Msa0532170:CDS |
| AGGCAAGTAAGGCAAAACAG+CGG | 0.773909 | 4_1:-6160409 | Msa0532170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATGAAAAAGTTTTTAA+GGG | + | chr4_1:6159267-6159286 | None:intergenic | 10.0% |
| !!! | TTTATATGAAAAAGTTTTTA+AGG | + | chr4_1:6159268-6159287 | None:intergenic | 10.0% |
| !!! | TTTTCATATAAAAATGTTAT+TGG | - | chr4_1:6159276-6159295 | Msa0532170:three_prime_UTR | 10.0% |
| !! | TTAAATTGAAATAATTTCTA+TGG | - | chr4_1:6159302-6159321 | Msa0532170:three_prime_UTR | 10.0% |
| !! | TTCAAAAAAAAAACAAAAAT+AGG | + | chr4_1:6159692-6159711 | None:intergenic | 10.0% |
| !!! | TTGAATTGAAATAATTTTTA+GGG | - | chr4_1:6161511-6161530 | Msa0532170:intron | 10.0% |
| !!! | TTGAATTGAAATAATTTTTA+GGG | - | chr4_1:6161511-6161530 | Msa0532170:intron | 10.0% |
| !!! | AAAAAATCATTAGATTTTAT+AGG | - | chr4_1:6163139-6163158 | Msa0532170:intron | 10.0% |
| !!! | AAAAATCATTAGATTTTATA+GGG | - | chr4_1:6163140-6163159 | Msa0532170:intron | 10.0% |
| !! | TATAGATTATAAATAATAGA+TGG | - | chr4_1:6163382-6163401 | Msa0532170:intron | 10.0% |
| !!! | GTTCTTTTTTTTTTTTTTTT+TGG | - | chr4_1:6164998-6165017 | Msa0532170:intron | 10.0% |
| !!! | TCTTTTTTTTTTTTTTTTTG+GGG | - | chr4_1:6165000-6165019 | Msa0532170:intron | 10.0% |
| !! | TAATAAGAGAATATGATAAA+GGG | + | chr4_1:6160330-6160349 | None:intergenic | 15.0% |
| !! | TTAATAAGAGAATATGATAA+AGG | + | chr4_1:6160331-6160350 | None:intergenic | 15.0% |
| !! | TGATAATATATCAAATGAAT+TGG | - | chr4_1:6160634-6160653 | Msa0532170:CDS | 15.0% |
| !! | TAACAAGATAATATGATAAA+GGG | + | chr4_1:6160709-6160728 | None:intergenic | 15.0% |
| !! | TTAACAAGATAATATGATAA+AGG | + | chr4_1:6160710-6160729 | None:intergenic | 15.0% |
| !!! | GTTGAATTGAAATAATTTTT+AGG | - | chr4_1:6161510-6161529 | Msa0532170:intron | 15.0% |
| !!! | TTGAATTGAAATAATTTTCA+GGG | - | chr4_1:6161888-6161907 | Msa0532170:intron | 15.0% |
| !!! | GTTGAATTGAAATAATTTTT+AGG | - | chr4_1:6161510-6161529 | Msa0532170:intron | 15.0% |
| !!! | ATTTTGTTTGATATTAATTG+AGG | - | chr4_1:6163296-6163315 | Msa0532170:intron | 15.0% |
| !! | AAAAAAAACACATGATTTAT+CGG | + | chr4_1:6164387-6164406 | None:intergenic | 15.0% |
| !!! | TAAATCATGTGTTTTTTTTA+TGG | - | chr4_1:6164388-6164407 | Msa0532170:intron | 15.0% |
| !!! | TTTTTTATGGAAAAATTTAG+TGG | - | chr4_1:6164401-6164420 | Msa0532170:intron | 15.0% |
| !!! | ATAATTTTCATAATATGAGA+GGG | + | chr4_1:6164446-6164465 | None:intergenic | 15.0% |
| !!! | AATAATTTTCATAATATGAG+AGG | + | chr4_1:6164447-6164466 | None:intergenic | 15.0% |
| !!! | TATTATAATTTTATGTCGAT+TGG | - | chr4_1:6164463-6164482 | Msa0532170:CDS | 15.0% |
| !! | ATATTTATAATCTAATAACG+TGG | + | chr4_1:6164503-6164522 | None:intergenic | 15.0% |
| !!! | ATTTTAATATGAACAAATGA+TGG | + | chr4_1:6164765-6164784 | None:intergenic | 15.0% |
| !! | TTCATATTAAAATTTGACTA+AGG | - | chr4_1:6164772-6164791 | Msa0532170:intron | 15.0% |
| !!! | TTACTTAAAATTTGAAACAA+AGG | - | chr4_1:6165596-6165615 | Msa0532170:CDS | 15.0% |
| !! | GGAATTTATTAAAATTTACA+GGG | + | chr4_1:6165737-6165756 | None:intergenic | 15.0% |
| !! | TGGAATTTATTAAAATTTAC+AGG | + | chr4_1:6165738-6165757 | None:intergenic | 15.0% |
| !! | ATTGTAATTGTATTCATTAT+AGG | - | chr4_1:6166172-6166191 | Msa0532170:intron | 15.0% |
| !!! | TTTGATTTATCATGTAAATA+TGG | - | chr4_1:6166848-6166867 | Msa0532170:five_prime_UTR | 15.0% |
| !! | TCATAAAAAGCAGAAAATAA+TGG | - | chr4_1:6159206-6159225 | Msa0532170:three_prime_UTR | 20.0% |
| !! | ATATAATACATATGCTTTCA+TGG | + | chr4_1:6159363-6159382 | None:intergenic | 20.0% |
| !! | TAATAATCCATCATTTGAAT+TGG | - | chr4_1:6159522-6159541 | Msa0532170:CDS | 20.0% |
| !! | AAACAAGAGAATAAGATAAA+GGG | + | chr4_1:6159666-6159685 | None:intergenic | 20.0% |
| !! | TAAACAAGAGAATAAGATAA+AGG | + | chr4_1:6159667-6159686 | None:intergenic | 20.0% |
| !!! | ATTCGGTGAAATTTTTAAAT+TGG | - | chr4_1:6159888-6159907 | Msa0532170:CDS | 20.0% |
| !!! | TGAAAAGGAAAATTTTCTTT+AGG | + | chr4_1:6160035-6160054 | None:intergenic | 20.0% |
| !!! | TAAAGAAAATTTTCCTTTTC+AGG | - | chr4_1:6160034-6160053 | Msa0532170:intron | 20.0% |
| !!! | AAAGAAAATTTTCCTTTTCA+GGG | - | chr4_1:6160035-6160054 | Msa0532170:intron | 20.0% |
| !!! | GTTGAATTGAAATAATTTGT+AGG | - | chr4_1:6160413-6160432 | Msa0532170:CDS | 20.0% |
| !!! | ATTGAATACAATACAGATTT+TGG | - | chr4_1:6160749-6160768 | Msa0532170:intron | 20.0% |
| !! | TAAGAGAATATGATTGATAA+AGG | + | chr4_1:6161086-6161105 | None:intergenic | 20.0% |
| !! | AATTATTTCAACTCAAAATC+TGG | + | chr4_1:6161144-6161163 | None:intergenic | 20.0% |
| !!! | TTTGAGTTGAAATAATTTTC+AGG | - | chr4_1:6161147-6161166 | Msa0532170:intron | 20.0% |
| !!! | TTGAGTTGAAATAATTTTCA+GGG | - | chr4_1:6161148-6161167 | Msa0532170:intron | 20.0% |
| !!! | TTTTCTGAAATTCATTTTTC+AGG | - | chr4_1:6161247-6161266 | Msa0532170:intron | 20.0% |
| !! | TAACAAGACAATATGATAAA+GGG | + | chr4_1:6161438-6161457 | None:intergenic | 20.0% |
| !! | TTAACAAGACAATATGATAA+AGG | + | chr4_1:6161439-6161458 | None:intergenic | 20.0% |
| !!! | GTTTTTTGAAATTCATTTTC+AGG | - | chr4_1:6161615-6161634 | Msa0532170:intron | 20.0% |
| !!! | GTTGAATTGAAATAATTTTC+AGG | - | chr4_1:6161887-6161906 | Msa0532170:intron | 20.0% |
| !!! | GTTTTTTGAAATTCATTTTC+AGG | - | chr4_1:6161615-6161634 | Msa0532170:intron | 20.0% |
| !! | TTAACAAGAGAATATGAAAA+CGG | + | chr4_1:6162253-6162272 | None:intergenic | 20.0% |
| !!! | GTTTTCCAAAATTCATTTTT+AGG | - | chr4_1:6162438-6162457 | Msa0532170:CDS | 20.0% |
| !! | TCATTCTATAAACAAATATG+TGG | + | chr4_1:6162984-6163003 | None:intergenic | 20.0% |
| !!! | ATCTAATGATTTTTTTTTGC+CGG | + | chr4_1:6163134-6163153 | None:intergenic | 20.0% |
| !! | TCGAGTAATTAATTTATAGT+TGG | - | chr4_1:6163524-6163543 | Msa0532170:intron | 20.0% |
| !!! | TTAACTATCGTTTTTAAGAA+TGG | + | chr4_1:6163578-6163597 | None:intergenic | 20.0% |
| !!! | TTTTAGAATTGTTAATGCAA+AGG | - | chr4_1:6163644-6163663 | Msa0532170:CDS | 20.0% |
| !!! | TTTAGAATTGTTAATGCAAA+GGG | - | chr4_1:6163645-6163664 | Msa0532170:CDS | 20.0% |
| !! | ACATGATATTCCAAAAAATT+GGG | + | chr4_1:6164980-6164999 | None:intergenic | 20.0% |
| !! | AACATGATATTCCAAAAAAT+TGG | + | chr4_1:6164981-6165000 | None:intergenic | 20.0% |
| !! | AAATTTCGAAGAAAACAAAT+TGG | + | chr4_1:6165424-6165443 | None:intergenic | 20.0% |
| !! | TTTATTAAAATTTACAGGGT+AGG | + | chr4_1:6165733-6165752 | None:intergenic | 20.0% |
| !! | TATTGACAAAAAACATGTTA+TGG | + | chr4_1:6165758-6165777 | None:intergenic | 20.0% |
| !! | TTGTCAATATTATTCAGATA+AGG | - | chr4_1:6165769-6165788 | Msa0532170:intron | 20.0% |
| !! | ATAAACATATTTACGATCAT+TGG | - | chr4_1:6166594-6166613 | Msa0532170:intron | 20.0% |
| !! | TAAACATATTTACGATCATT+GGG | - | chr4_1:6166595-6166614 | Msa0532170:intron | 20.0% |
| !! | TTTCTATCACAAAAAAACAT+AGG | + | chr4_1:6166653-6166672 | None:intergenic | 20.0% |
| !!! | TTTTTACTATGATTGTAAGA+AGG | + | chr4_1:6166822-6166841 | None:intergenic | 20.0% |
| !! | ATGTAAATATGGTTTACATT+TGG | - | chr4_1:6166859-6166878 | Msa0532170:five_prime_UTR | 20.0% |
| !! | TCATTACAAATATTGCTAAA+TGG | + | chr4_1:6167074-6167093 | None:intergenic | 20.0% |
| ! | ATGAAAATGAAAGCAGAAAA+TGG | + | chr4_1:6159190-6159209 | None:intergenic | 25.0% |
| ! | ACAATTCGTTTACCAAAATT+TGG | + | chr4_1:6159758-6159777 | None:intergenic | 25.0% |
| !!! | ATGCTGAATTGATAATTTTC+AGG | - | chr4_1:6159784-6159803 | Msa0532170:CDS | 25.0% |
| !!! | TGCTGAATTGATAATTTTCA+GGG | - | chr4_1:6159785-6159804 | Msa0532170:CDS | 25.0% |
| !!! | ATTGGTTATACCGATTTAAA+AGG | - | chr4_1:6159906-6159925 | Msa0532170:CDS | 25.0% |
| !!! | GTTTTCTGAAATTCATTTTC+AGG | - | chr4_1:6160139-6160158 | Msa0532170:intron | 25.0% |
| ! | ATTGTATTCAATTCACAGTA+AGG | + | chr4_1:6160362-6160381 | None:intergenic | 25.0% |
| ! | AATTGAATACAATCCAGATT+TGG | - | chr4_1:6160369-6160388 | Msa0532170:CDS | 25.0% |
| ! | ATTGAATACAATCCAGATTT+GGG | - | chr4_1:6160370-6160389 | Msa0532170:CDS | 25.0% |
| ! | TCTTAAATTTCTCTTTGACA+TGG | + | chr4_1:6160546-6160565 | None:intergenic | 25.0% |
| ! | CAAAGAGAAATTTAAGAGAT+CGG | - | chr4_1:6160549-6160568 | Msa0532170:CDS | 25.0% |
| !!! | ACAATACAGATTTTGGTAAA+CGG | - | chr4_1:6160756-6160775 | Msa0532170:intron | 25.0% |
| !! | TTGAATTGGAATAGTTTTCA+GGG | - | chr4_1:6160793-6160812 | Msa0532170:intron | 25.0% |
| !!! | GTTTTCTGAAATTCATTTTC+AGG | - | chr4_1:6160139-6160158 | Msa0532170:intron | 25.0% |
| ! | ACTCTATTCAATTCACAATA+AGG | + | chr4_1:6161470-6161489 | None:intergenic | 25.0% |
| !! | TCTTAAACTTCTCTTTGAAA+TGG | + | chr4_1:6161643-6161662 | None:intergenic | 25.0% |
| ! | ATTTCAAAGAGAAGTTTAAG+AGG | - | chr4_1:6161642-6161661 | Msa0532170:intron | 25.0% |
| ! | TCAACTTCAAATTCATTTGA+TGG | + | chr4_1:6160265-6160284 | None:intergenic | 25.0% |
| ! | TGATAATCCATCAAATGATT+TGG | - | chr4_1:6162108-6162127 | Msa0532170:intron | 25.0% |
| ! | TAACAAGAGAATATGAAAAC+GGG | + | chr4_1:6162252-6162271 | None:intergenic | 25.0% |
| ! | TGTTAACTTCTATTCCTTAT+TGG | - | chr4_1:6162267-6162286 | Msa0532170:CDS | 25.0% |
| ! | GTTAACTTCTATTCCTTATT+GGG | - | chr4_1:6162268-6162287 | Msa0532170:CDS | 25.0% |
| !! | TGGAACCTAAAAATGAATTT+TGG | + | chr4_1:6162446-6162465 | None:intergenic | 25.0% |
| !!! | AAATTCATTTTTAGGTTCCA+TGG | - | chr4_1:6162446-6162465 | Msa0532170:CDS | 25.0% |
| ! | TAATAATCCATCAAATGAGT+TGG | - | chr4_1:6162554-6162573 | Msa0532170:CDS | 25.0% |
| ! | CAACATGTAAAACTATAACA+TGG | + | chr4_1:6162728-6162747 | None:intergenic | 25.0% |
| ! | AGAACTGTATGTTAATGTTA+TGG | + | chr4_1:6162927-6162946 | None:intergenic | 25.0% |
| !! | CATTAGATTTTATAGGGAAA+AGG | - | chr4_1:6163146-6163165 | Msa0532170:intron | 25.0% |
| !!! | AAAGCAAGTTTTGATATATG+AGG | + | chr4_1:6163194-6163213 | None:intergenic | 25.0% |
| ! | ATAATCCTCAAAAATAAGTG+AGG | + | chr4_1:6163220-6163239 | None:intergenic | 25.0% |
| !!! | CACTTATTTTTGAGGATTAT+TGG | - | chr4_1:6163220-6163239 | Msa0532170:intron | 25.0% |
| ! | TACTAAGTATAGTATGTACT+AGG | + | chr4_1:6163498-6163517 | None:intergenic | 25.0% |
| !!! | CGTTTTTAAGAATGGAATAA+AGG | + | chr4_1:6163570-6163589 | None:intergenic | 25.0% |
| !! | TGCAGATGTCTTATTATTAA+TGG | - | chr4_1:6163611-6163630 | Msa0532170:CDS | 25.0% |
| ! | TTAGAATTGTTAATGCAAAG+GGG | - | chr4_1:6163646-6163665 | Msa0532170:CDS | 25.0% |
| !! | GTTGAATGTTTTCATTTCAA+TGG | - | chr4_1:6163729-6163748 | Msa0532170:CDS | 25.0% |
| !! | TATCTGAAGCAAAATACAAT+AGG | + | chr4_1:6163803-6163822 | None:intergenic | 25.0% |
| ! | AAGTACTAAAGATACTATAG+TGG | - | chr4_1:6164040-6164059 | Msa0532170:intron | 25.0% |
| !! | AAAAAGTTCTGGTATGTTAT+TGG | - | chr4_1:6164063-6164082 | Msa0532170:intron | 25.0% |
| ! | GTATTAATGTTATACAACGT+GGG | + | chr4_1:6164532-6164551 | None:intergenic | 25.0% |
| !! | ATATGTTTTCTAATGCCATA+GGG | + | chr4_1:6164903-6164922 | None:intergenic | 25.0% |
| !! | AATATGTTTTCTAATGCCAT+AGG | + | chr4_1:6164904-6164923 | None:intergenic | 25.0% |
| ! | TATGGCATTAGAAAACATAT+TGG | - | chr4_1:6164903-6164922 | Msa0532170:CDS | 25.0% |
| !! | GAAATTTTTGCCCAATTTTT+TGG | - | chr4_1:6164967-6164986 | Msa0532170:intron | 25.0% |
| !!! | ATTGGTGTGTGTTTTAATTA+CGG | - | chr4_1:6165246-6165265 | Msa0532170:CDS | 25.0% |
| !!! | AGACTGTACTTTTTTATAGA+TGG | + | chr4_1:6165278-6165297 | None:intergenic | 25.0% |
| !! | GTTTTCTTCGAAATTTATTG+AGG | - | chr4_1:6165428-6165447 | Msa0532170:intron | 25.0% |
| !! | TATTCTTTTCACAGAACAAT+TGG | - | chr4_1:6165484-6165503 | Msa0532170:intron | 25.0% |
| ! | AATCAATATACCTCAAAAGA+AGG | + | chr4_1:6165696-6165715 | None:intergenic | 25.0% |
| !! | TTGTTATTAACAGTCTAACT+AGG | - | chr4_1:6165933-6165952 | Msa0532170:CDS | 25.0% |
| ! | ATTGTATTCATTATAGGACA+AGG | - | chr4_1:6166178-6166197 | Msa0532170:intron | 25.0% |
| ! | AAGATGTGATAACAGATATT+AGG | - | chr4_1:6166743-6166762 | Msa0532170:CDS | 25.0% |
| ! | AGATGTGATAACAGATATTA+GGG | - | chr4_1:6166744-6166763 | Msa0532170:CDS | 25.0% |
| !! | ATTTTGTGCTGTATAGAAAA+TGG | - | chr4_1:6167023-6167042 | Msa0532170:five_prime_UTR | 25.0% |
| !! | GTCCAGATTTTAGTAAACTA+AGG | - | chr4_1:6159150-6159169 | Msa0532170:three_prime_UTR | 30.0% |
| GGTAGAAATATGTTAGCTAT+AGG | - | chr4_1:6159227-6159246 | Msa0532170:three_prime_UTR | 30.0% | |
| TAATACATATGCTTTCATGG+AGG | + | chr4_1:6159360-6159379 | None:intergenic | 30.0% | |
| ! | GTTTTCCCAAATTCATTTTC+AGG | - | chr4_1:6159406-6159425 | Msa0532170:three_prime_UTR | 30.0% |
| TGGTACCTGAAAATGAATTT+GGG | + | chr4_1:6159414-6159433 | None:intergenic | 30.0% | |
| ATGGTACCTGAAAATGAATT+TGG | + | chr4_1:6159415-6159434 | None:intergenic | 30.0% | |
| !!! | AAATTCATTTTCAGGTACCA+TGG | - | chr4_1:6159414-6159433 | Msa0532170:three_prime_UTR | 30.0% |
| !! | GATGGATTATTAAGAACAAC+CGG | + | chr4_1:6159514-6159533 | None:intergenic | 30.0% |
| TCAACTTCCAATTCAAATGA+TGG | + | chr4_1:6159532-6159551 | None:intergenic | 30.0% | |
| ! | TTTGAATTGGAAGTTGATCT+TGG | - | chr4_1:6159535-6159554 | Msa0532170:CDS | 30.0% |
| ! | TTGAATTGGAAGTTGATCTT+GGG | - | chr4_1:6159536-6159555 | Msa0532170:CDS | 30.0% |
| ! | TTTGAACACAGTCCAAATTT+TGG | - | chr4_1:6159743-6159762 | Msa0532170:CDS | 30.0% |
| !! | GCTGAATTGATAATTTTCAG+GGG | - | chr4_1:6159786-6159805 | Msa0532170:CDS | 30.0% |
| !! | TGGGGTATTAAGGTAATTTT+GGG | + | chr4_1:6159851-6159870 | None:intergenic | 30.0% |
| !! | TTGGGGTATTAAGGTAATTT+TGG | + | chr4_1:6159852-6159871 | None:intergenic | 30.0% |
| AATTACCTTAATACCCCAAA+AGG | - | chr4_1:6159853-6159872 | Msa0532170:CDS | 30.0% | |
| ! | AGCTTAAGCACCTTTTAAAT+CGG | + | chr4_1:6159919-6159938 | None:intergenic | 30.0% |
| !!! | AAATTCATTTTCAGGTACCA+TGG | - | chr4_1:6159414-6159433 | Msa0532170:three_prime_UTR | 30.0% |
| CAAAGAGAAAGTTAAGAGAT+CGG | - | chr4_1:6160170-6160189 | Msa0532170:CDS | 30.0% | |
| TTCAATTCACAGTAAGGAAT+AGG | + | chr4_1:6160356-6160375 | None:intergenic | 30.0% | |
| TCCCTAATAACACTTCAAAT+GGG | - | chr4_1:6160436-6160455 | Msa0532170:intron | 30.0% | |
| !! | GTCATCTGAAATTCATTTTC+AGG | - | chr4_1:6160518-6160537 | Msa0532170:intron | 30.0% |
| TGTTAATTCCTATTCCTTAC+TGG | - | chr4_1:6160724-6160743 | Msa0532170:intron | 30.0% | |
| GTTAATTCCTATTCCTTACT+GGG | - | chr4_1:6160725-6160744 | Msa0532170:intron | 30.0% | |
| ATTGTATTCAATTCCCAGTA+AGG | + | chr4_1:6160741-6160760 | None:intergenic | 30.0% | |
| !! | CAATACAGATTTTGGTAAAC+GGG | - | chr4_1:6160757-6160776 | Msa0532170:intron | 30.0% |
| !! | GTTATTTCTGGATGTTGAAT+TGG | - | chr4_1:6160779-6160798 | Msa0532170:intron | 30.0% |
| ! | GTTGAATTGGAATAGTTTTC+AGG | - | chr4_1:6160792-6160811 | Msa0532170:intron | 30.0% |
| ! | TGAATTGGAATAGTTTTCAG+GGG | - | chr4_1:6160794-6160813 | Msa0532170:intron | 30.0% |
| CAAAGAGAAATTTGAGAGAT+CGG | - | chr4_1:6160925-6160944 | Msa0532170:intron | 30.0% | |
| TGATAACCCATCAAATGAAT+TGG | - | chr4_1:6161010-6161029 | Msa0532170:intron | 30.0% | |
| CAACTTCCAATTCATTTGAT+GGG | + | chr4_1:6160643-6160662 | None:intergenic | 30.0% | |
| TCAACTTCCAATTCATTTGA+TGG | + | chr4_1:6160644-6160663 | None:intergenic | 30.0% | |
| TATTAACTCCTATTCCTTAC+TGG | - | chr4_1:6160345-6160364 | Msa0532170:intron | 30.0% | |
| ATTAACTCCTATTCCTTACT+GGG | - | chr4_1:6160346-6160365 | Msa0532170:intron | 30.0% | |
| ATTGTATTCAATTCCCAGTA+AGG | + | chr4_1:6160741-6160760 | None:intergenic | 30.0% | |
| GCCATAATAACACTTCAAAT+GGG | - | chr4_1:6161170-6161189 | Msa0532170:intron | 30.0% | |
| !!! | AATTCATTTTTCAGGTACCA+TGG | - | chr4_1:6161255-6161274 | Msa0532170:intron | 30.0% |
| TCAACTTCTAATTCATTCGA+TGG | + | chr4_1:6161373-6161392 | None:intergenic | 30.0% | |
| ! | ATTGAATAGAGTCCTGATTT+TGG | - | chr4_1:6161478-6161497 | Msa0532170:intron | 30.0% |
| !! | GCCATTTTGATGATCTATTA+GGG | + | chr4_1:6161537-6161556 | None:intergenic | 30.0% |
| !! | GTTTTCATAAAGAAGCATGT+AGG | + | chr4_1:6161559-6161578 | None:intergenic | 30.0% |
| ! | TAACAGGAGAGTATGATAAA+GGG | + | chr4_1:6161806-6161825 | None:intergenic | 30.0% |
| ! | TTAACAGGAGAGTATGATAA+AGG | + | chr4_1:6161807-6161826 | None:intergenic | 30.0% |
| TCATACATAAGCTTTCATAG+AGG | + | chr4_1:6161946-6161965 | None:intergenic | 30.0% | |
| TCTTAACTTTCTCTTTGCAA+TGG | + | chr4_1:6162020-6162039 | None:intergenic | 30.0% | |
| ATTGCAAAGAGAAAGTTAAG+AGG | - | chr4_1:6162019-6162038 | Msa0532170:intron | 30.0% | |
| TCAACTTCCAAATCATTTGA+TGG | + | chr4_1:6162118-6162137 | None:intergenic | 30.0% | |
| ACTGTATTCAATTCCCAATA+AGG | + | chr4_1:6162284-6162303 | None:intergenic | 30.0% | |
| ! | ATTGAATACAGTCCAGATTT+TGG | - | chr4_1:6162292-6162311 | Msa0532170:CDS | 30.0% |
| ACAATCTGTTTACCAAAATC+TGG | + | chr4_1:6162307-6162326 | None:intergenic | 30.0% | |
| ! | TCATACATATGCTTTTCTAG+AGG | + | chr4_1:6162394-6162413 | None:intergenic | 30.0% |
| GGAGAATCAATCAAATGAAT+TGG | - | chr4_1:6162605-6162624 | Msa0532170:intron | 30.0% | |
| !! | TGATTGAAGTTCTGTTTTGA+AGG | + | chr4_1:6162701-6162720 | None:intergenic | 30.0% |
| CATGTAAAACTATAACATGG+AGG | + | chr4_1:6162725-6162744 | None:intergenic | 30.0% | |
| !! | TGAGTTCTAAACTGTATTCT+TGG | + | chr4_1:6162827-6162846 | None:intergenic | 30.0% |
| ! | AAGAATACAGTTTAGAACTC+AGG | - | chr4_1:6162826-6162845 | Msa0532170:intron | 30.0% |
| ! | AGAATACAGTTTAGAACTCA+GGG | - | chr4_1:6162827-6162846 | Msa0532170:intron | 30.0% |
| AATTATGGAGTGCAATGATA+AGG | - | chr4_1:6162874-6162893 | Msa0532170:intron | 30.0% | |
| GTATGTTAATGTTATGGTGT+GGG | + | chr4_1:6162921-6162940 | None:intergenic | 30.0% | |
| TGTATGTTAATGTTATGGTG+TGG | + | chr4_1:6162922-6162941 | None:intergenic | 30.0% | |
| !!! | AATGATTTTTTTTTGCCGGT+AGG | + | chr4_1:6163130-6163149 | None:intergenic | 30.0% |
| !! | ATTTTTGAGGATTATTGGTC+CGG | - | chr4_1:6163225-6163244 | Msa0532170:intron | 30.0% |
| CAATTTCTTCCTTTCATACA+GGG | + | chr4_1:6163251-6163270 | None:intergenic | 30.0% | |
| ATAGAATGCGAGAAAAACTT+AGG | - | chr4_1:6163465-6163484 | Msa0532170:intron | 30.0% | |
| ! | TTCAATGGTTCTATAGTTCA+TGG | - | chr4_1:6163744-6163763 | Msa0532170:CDS | 30.0% |
| GATCAGTAATGAAGTCATTA+CGG | + | chr4_1:6163959-6163978 | None:intergenic | 30.0% | |
| TCCACTTGTTCACATTAAAA+CGG | + | chr4_1:6164007-6164026 | None:intergenic | 30.0% | |
| ! | TACTATAGTGGAAAAAGTTC+TGG | - | chr4_1:6164052-6164071 | Msa0532170:intron | 30.0% |
| GTTATTAACTTAATTGGCTG+GGG | + | chr4_1:6164205-6164224 | None:intergenic | 30.0% | |
| CGTTATTAACTTAATTGGCT+GGG | + | chr4_1:6164206-6164225 | None:intergenic | 30.0% | |
| ACGTTATTAACTTAATTGGC+TGG | + | chr4_1:6164207-6164226 | None:intergenic | 30.0% | |
| AGCCAATTAAGTTAATAACG+TGG | - | chr4_1:6164206-6164225 | Msa0532170:intron | 30.0% | |
| GCCAATTAAGTTAATAACGT+GGG | - | chr4_1:6164207-6164226 | Msa0532170:intron | 30.0% | |
| CCAATTAAGTTAATAACGTG+GGG | - | chr4_1:6164208-6164227 | Msa0532170:intron | 30.0% | |
| CAATTAAGTTAATAACGTGG+GGG | - | chr4_1:6164209-6164228 | Msa0532170:intron | 30.0% | |
| TTTGAACATGAAAATGAGCA+AGG | + | chr4_1:6164311-6164330 | None:intergenic | 30.0% | |
| GGTATTAATGTTATACAACG+TGG | + | chr4_1:6164533-6164552 | None:intergenic | 30.0% | |
| ACTGAATGTGTGATCTTAAT+AGG | + | chr4_1:6164574-6164593 | None:intergenic | 30.0% | |
| ATGAACAAATGATGGTATGA+TGG | + | chr4_1:6164757-6164776 | None:intergenic | 30.0% | |
| ! | TATGTTTTCTAATGCCATAG+GGG | + | chr4_1:6164902-6164921 | None:intergenic | 30.0% |
| TTGGGCAAAAATTTCAAGAA+AGG | + | chr4_1:6164962-6164981 | None:intergenic | 30.0% | |
| TTTCGAAGAAAACAAATTGG+AGG | + | chr4_1:6165421-6165440 | None:intergenic | 30.0% | |
| TCGAAATTTATTGAGGATTG+TGG | - | chr4_1:6165435-6165454 | Msa0532170:intron | 30.0% | |
| TAAAATTTACAGGGTAGGAT+AGG | + | chr4_1:6165728-6165747 | None:intergenic | 30.0% | |
| !! | GATAAGGAGCATTAAAAACA+AGG | - | chr4_1:6165785-6165804 | Msa0532170:intron | 30.0% |
| CATTAAAAACAAGGCAAGTA+AGG | - | chr4_1:6165794-6165813 | Msa0532170:intron | 30.0% | |
| !!! | AGTAAGATGTCGATTTTACA+TGG | - | chr4_1:6165878-6165897 | Msa0532170:intron | 30.0% |
| ! | TTATCTTTTATACTCACTCG+TGG | + | chr4_1:6166578-6166597 | None:intergenic | 30.0% |
| ! | AGGAATTTGCTTTAAACTCT+CGG | - | chr4_1:6166889-6166908 | Msa0532170:five_prime_UTR | 30.0% |
| GGCCTTAGTTTACTAAAATC+TGG | + | chr4_1:6159155-6159174 | None:intergenic | 35.0% | |
| TGTTTACTCCTATTCCTTAC+CGG | - | chr4_1:6159718-6159737 | Msa0532170:CDS | 35.0% | |
| !! | GTATTAAGGTAATTTTGGGG+TGG | + | chr4_1:6159847-6159866 | None:intergenic | 35.0% |
| !! | GGGGTATTAAGGTAATTTTG+GGG | + | chr4_1:6159850-6159869 | None:intergenic | 35.0% |
| ! | ATGACAGTTAACTGCCTTTT+GGG | + | chr4_1:6159870-6159889 | None:intergenic | 35.0% |
| ! | AATGACAGTTAACTGCCTTT+TGG | + | chr4_1:6159871-6159890 | None:intergenic | 35.0% |
| AAAGGCAGTTAACTGTCATT+CGG | - | chr4_1:6159871-6159890 | Msa0532170:CDS | 35.0% | |
| GCCATAATAGCACTTCAAAT+GGG | - | chr4_1:6160057-6160076 | Msa0532170:intron | 35.0% | |
| TCATACATATGCTTTCGTAG+AGG | + | chr4_1:6160093-6160112 | None:intergenic | 35.0% | |
| TCTTAACTTTCTCTTTGCCA+TGG | + | chr4_1:6160167-6160186 | None:intergenic | 35.0% | |
| ACAGAGAGCAAATGTCAAAT+CGG | - | chr4_1:6160225-6160244 | Msa0532170:CDS | 35.0% | |
| ! | ATTTGAAGTTGATCCTGAGT+TGG | - | chr4_1:6160273-6160292 | Msa0532170:intron | 35.0% |
| GTCCCTAATAACACTTCAAA+TGG | - | chr4_1:6160435-6160454 | Msa0532170:intron | 35.0% | |
| ! | GCCCATTTGAAGTGTTATTA+GGG | + | chr4_1:6160440-6160459 | None:intergenic | 35.0% |
| TCATACATATGCTTTCGTAG+CGG | + | chr4_1:6160093-6160112 | None:intergenic | 35.0% | |
| TTCAATTCCCAGTAAGGAAT+AGG | + | chr4_1:6160735-6160754 | None:intergenic | 35.0% | |
| !! | TTTGGTAAACGGGTTATTTC+TGG | - | chr4_1:6160767-6160786 | Msa0532170:intron | 35.0% |
| TGATACATATGCTTTCGTAG+AGG | + | chr4_1:6160851-6160870 | None:intergenic | 35.0% | |
| CGATCTCTCAAATTTCTCTT+TGG | + | chr4_1:6160927-6160946 | None:intergenic | 35.0% | |
| TTTGTAGAGGAGCAAGAAAT+AGG | - | chr4_1:6161047-6161066 | Msa0532170:intron | 35.0% | |
| TTCAATTCCCAGTAAGGAAT+AGG | + | chr4_1:6160735-6160754 | None:intergenic | 35.0% | |
| GGCCATAATAACACTTCAAA+TGG | - | chr4_1:6161169-6161188 | Msa0532170:intron | 35.0% | |
| ! | GCCCATTTGAAGTGTTATTA+TGG | + | chr4_1:6160440-6160459 | None:intergenic | 35.0% |
| TTCAAAAGACTTGACGCTTT+AGG | + | chr4_1:6161304-6161323 | None:intergenic | 35.0% | |
| TCTTGCTTCTCTACAAACTT+GGG | + | chr4_1:6161397-6161416 | None:intergenic | 35.0% | |
| AACATCCAGAAACCAAAATC+AGG | + | chr4_1:6161493-6161512 | None:intergenic | 35.0% | |
| GCCCTAATAGATCATCAAAA+TGG | - | chr4_1:6161533-6161552 | Msa0532170:intron | 35.0% | |
| !! | GGCCATTTTGATGATCTATT+AGG | + | chr4_1:6161538-6161557 | None:intergenic | 35.0% |
| CAAAGAGAAGTTTAAGAGGT+AGG | - | chr4_1:6161646-6161665 | Msa0532170:intron | 35.0% | |
| ! | TTCTGAAGACTTGACACTTT+AGG | + | chr4_1:6161672-6161691 | None:intergenic | 35.0% |
| AGTTGATCTTGAGTTTGTAG+AGG | - | chr4_1:6161755-6161774 | Msa0532170:intron | 35.0% | |
| GCCCTAATAGCATTTCAAAT+GGG | - | chr4_1:6161910-6161929 | Msa0532170:intron | 35.0% | |
| ! | GCCCATTTGAAATGCTATTA+GGG | + | chr4_1:6161914-6161933 | None:intergenic | 35.0% |
| CAAAGAGAAAGTTAAGAGGT+AGG | - | chr4_1:6162023-6162042 | Msa0532170:intron | 35.0% | |
| ! | AAAGAGTGCAAATGTCAAAC+CGG | - | chr4_1:6162078-6162097 | Msa0532170:intron | 35.0% |
| !! | GATGGATTATCAAGAACAAC+CGG | + | chr4_1:6162100-6162119 | None:intergenic | 35.0% |
| TTTGGTAAACAGATTGTGTC+TGG | - | chr4_1:6162310-6162329 | Msa0532170:CDS | 35.0% | |
| ! | GCCTATTTGAAGTGCTATTA+GGG | + | chr4_1:6162362-6162381 | None:intergenic | 35.0% |
| !! | GCTTTTCTAGAGGAACATAT+AGG | + | chr4_1:6162384-6162403 | None:intergenic | 35.0% |
| ! | TTCTGAAGACTTGACACTTT+AGG | + | chr4_1:6161672-6161691 | None:intergenic | 35.0% |
| ! | GAATACAGTTTAGAACTCAG+GGG | - | chr4_1:6162828-6162847 | Msa0532170:intron | 35.0% |
| !!! | TTGAGCCTCACTTATTTTTG+AGG | - | chr4_1:6163212-6163231 | Msa0532170:intron | 35.0% |
| GCAATTTCTTCCTTTCATAC+AGG | + | chr4_1:6163252-6163271 | None:intergenic | 35.0% | |
| ! | TTCTATAGTTCATGGCTTTG+AGG | - | chr4_1:6163752-6163771 | Msa0532170:CDS | 35.0% |
| AGGCGTAAGAATAAAGTAAG+AGG | - | chr4_1:6163831-6163850 | Msa0532170:intron | 35.0% | |
| AAAGTAAGAGGACAAACAAG+AGG | - | chr4_1:6163843-6163862 | Msa0532170:intron | 35.0% | |
| AAGTAAGAGGACAAACAAGA+GGG | - | chr4_1:6163844-6163863 | Msa0532170:intron | 35.0% | |
| ATGTTGATATTCATCCTACG+AGG | - | chr4_1:6163913-6163932 | Msa0532170:intron | 35.0% | |
| CCACTTGTTCACATTAAAAC+GGG | + | chr4_1:6164006-6164025 | None:intergenic | 35.0% | |
| CCCCACGTTATTAACTTAAT+TGG | + | chr4_1:6164211-6164230 | None:intergenic | 35.0% | |
| TTGGTGTGGATTTCTTCTAT+GGG | + | chr4_1:6164245-6164264 | None:intergenic | 35.0% | |
| AGGTTACTATGCAGTATGTT+GGG | + | chr4_1:6164554-6164573 | None:intergenic | 35.0% | |
| TAGGTTACTATGCAGTATGT+TGG | + | chr4_1:6164555-6164574 | None:intergenic | 35.0% | |
| ! | AGCCTTATAAGGACTACTTT+GGG | + | chr4_1:6164606-6164625 | None:intergenic | 35.0% |
| ATGTATGATGACTGCAATGA+AGG | + | chr4_1:6164665-6164684 | None:intergenic | 35.0% | |
| GCATTGAGTAAAATGTGTCA+TGG | - | chr4_1:6165167-6165186 | Msa0532170:intron | 35.0% | |
| AAACACACACCAATGTAGTA+CGG | + | chr4_1:6165240-6165259 | None:intergenic | 35.0% | |
| CAGAGTCAAAACAGAACAAA+TGG | + | chr4_1:6165385-6165404 | None:intergenic | 35.0% | |
| !!! | CATTTGTTCTGTTTTGACTC+TGG | - | chr4_1:6165383-6165402 | Msa0532170:intron | 35.0% |
| TTTATTGAGGATTGTGGATG+AGG | - | chr4_1:6165441-6165460 | Msa0532170:intron | 35.0% | |
| TTCAAGATACAGATGTGGTT+CGG | - | chr4_1:6165511-6165530 | Msa0532170:intron | 35.0% | |
| TGAGTCTGATTGGAAATTCT+TGG | - | chr4_1:6165653-6165672 | Msa0532170:CDS | 35.0% | |
| ! | TTTTAGCAGTCCTTCTTTTG+AGG | - | chr4_1:6165683-6165702 | Msa0532170:intron | 35.0% |
| AAAAGTCACACGATTTGACA+AGG | + | chr4_1:6165911-6165930 | None:intergenic | 35.0% | |
| ATGGCAGATAACACACAAAA+AGG | - | chr4_1:6166012-6166031 | Msa0532170:CDS | 35.0% | |
| ATAACACACAAAAAGGCCAA+TGG | - | chr4_1:6166019-6166038 | Msa0532170:CDS | 35.0% | |
| TAACACACAAAAAGGCCAAT+GGG | - | chr4_1:6166020-6166039 | Msa0532170:CDS | 35.0% | |
| TCCACAATTTAAACAAGTGG+CGG | + | chr4_1:6166133-6166152 | None:intergenic | 35.0% | |
| CAGTCCACAATTTAAACAAG+TGG | + | chr4_1:6166136-6166155 | None:intergenic | 35.0% | |
| AATGGAAACTGCCTTTAAGT+CGG | - | chr4_1:6166256-6166275 | Msa0532170:intron | 35.0% | |
| ! | CAATCATATATGCAGGGTTT+TGG | - | chr4_1:6166290-6166309 | Msa0532170:intron | 35.0% |
| !! | ATTAAGAGCCAAACTTGTTG+AGG | - | chr4_1:6166418-6166437 | Msa0532170:intron | 35.0% |
| GTATCGTCAAAAAGATATGC+AGG | - | chr4_1:6166499-6166518 | Msa0532170:intron | 35.0% | |
| AATATTGAGACAATGCTGAC+TGG | + | chr4_1:6166553-6166572 | None:intergenic | 35.0% | |
| ! | CTTTTCTTTATCGTCTGATG+AGG | + | chr4_1:6166689-6166708 | None:intergenic | 35.0% |
| AGCTAGATATCGCTTGTATT+AGG | - | chr4_1:6166774-6166793 | Msa0532170:CDS | 35.0% | |
| ! | GGTTTACATTTGGAGTATGT+AGG | - | chr4_1:6166869-6166888 | Msa0532170:five_prime_UTR | 35.0% |
| AGAAAATGGCTCAAGTAACG+GGG | + | chr4_1:6159176-6159195 | None:intergenic | 40.0% | |
| CAGAAAATGGCTCAAGTAAC+GGG | + | chr4_1:6159177-6159196 | None:intergenic | 40.0% | |
| GCAGAAAATGGCTCAAGTAA+CGG | + | chr4_1:6159178-6159197 | None:intergenic | 40.0% | |
| TTCAGAAGACTTGACGCTTT+AGG | + | chr4_1:6159463-6159482 | None:intergenic | 40.0% | |
| AGTTGATCTTGGGTTTGTAG+AGG | - | chr4_1:6159546-6159565 | Msa0532170:CDS | 40.0% | |
| TATTCTGCTCCAGTTGATCT+TGG | - | chr4_1:6159604-6159623 | Msa0532170:intron | 40.0% | |
| ATTCTGCTCCAGTTGATCTT+GGG | - | chr4_1:6159605-6159624 | Msa0532170:intron | 40.0% | |
| TCTACAAACCCAAGATCAAC+TGG | + | chr4_1:6159547-6159566 | None:intergenic | 40.0% | |
| AGTTGATCTTGGGTTTGTAG+AGG | - | chr4_1:6159546-6159565 | Msa0532170:CDS | 40.0% | |
| GTTTACTCCTATTCCTTACC+GGG | - | chr4_1:6159719-6159738 | Msa0532170:CDS | 40.0% | |
| TTCAAATCCCGGTAAGGAAT+AGG | + | chr4_1:6159729-6159748 | None:intergenic | 40.0% | |
| TTTGGACTGTGTTCAAATCC+CGG | + | chr4_1:6159740-6159759 | None:intergenic | 40.0% | |
| TCAGGGGAAAATTGCTCATT+AGG | - | chr4_1:6159802-6159821 | Msa0532170:CDS | 40.0% | |
| !!! | AACTGCCTTTTGGGGTATTA+AGG | + | chr4_1:6159861-6159880 | None:intergenic | 40.0% |
| ! | TGACAGTTAACTGCCTTTTG+GGG | + | chr4_1:6159869-6159888 | None:intergenic | 40.0% |
| ! | AACGGCAGTTAAGTGTTGTT+CGG | + | chr4_1:6159955-6159974 | None:intergenic | 40.0% |
| CAGGGAAGCTTAAGAGAAAT+TGG | - | chr4_1:6160004-6160023 | Msa0532170:CDS | 40.0% | |
| GGCCATAATAGCACTTCAAA+TGG | - | chr4_1:6160056-6160075 | Msa0532170:intron | 40.0% | |
| ! | GCCCATTTGAAGTGCTATTA+TGG | + | chr4_1:6160061-6160080 | None:intergenic | 40.0% |
| ! | GGCCCATTTGAAGTGTTATT+AGG | + | chr4_1:6160441-6160460 | None:intergenic | 40.0% |
| ! | TTCTGAAGACTTGACGCTTT+AGG | + | chr4_1:6160575-6160594 | None:intergenic | 40.0% |
| GGCCTTAGAACACTTCAAAT+GGG | - | chr4_1:6160815-6160834 | Msa0532170:intron | 40.0% | |
| ! | TTCTGAAGAGTAGACGCTTT+AGG | + | chr4_1:6160951-6160970 | None:intergenic | 40.0% |
| AGTTGATCCTGAGTTTGTAG+AGG | - | chr4_1:6161034-6161053 | Msa0532170:intron | 40.0% | |
| GAGCAAGAAATAGGTACACA+TGG | - | chr4_1:6161056-6161075 | Msa0532170:intron | 40.0% | |
| AGCATATCATGCTTTCGTAG+AGG | + | chr4_1:6161206-6161225 | None:intergenic | 40.0% | |
| !! | AGCGTCAAGTCTTTTGAAGA+AGG | - | chr4_1:6161306-6161325 | Msa0532170:intron | 40.0% |
| !! | GCGTCAAGTCTTTTGAAGAA+GGG | - | chr4_1:6161307-6161326 | Msa0532170:intron | 40.0% |
| CTCTTGCTTCTCTACAAACT+TGG | + | chr4_1:6161398-6161417 | None:intergenic | 40.0% | |
| TTTGTAGAGAAGCAAGAGAC+AGG | - | chr4_1:6161400-6161419 | Msa0532170:intron | 40.0% | |
| !!! | AGAGTCCTGATTTTGGTTTC+TGG | - | chr4_1:6161485-6161504 | Msa0532170:intron | 40.0% |
| ACAGAGCGCAAATGTCAAAA+CGG | - | chr4_1:6161701-6161720 | Msa0532170:intron | 40.0% | |
| ATTGAATGCAGTCCAGATGT+TGG | - | chr4_1:6161844-6161863 | Msa0532170:intron | 40.0% | |
| ! | ACAACTCGTTTTCCAACATC+TGG | + | chr4_1:6161859-6161878 | None:intergenic | 40.0% |
| ! | GTTGGAAAACGAGTTGTTTC+TGG | - | chr4_1:6161862-6161881 | Msa0532170:intron | 40.0% |
| GGCCCTAATAGCATTTCAAA+TGG | - | chr4_1:6161909-6161928 | Msa0532170:intron | 40.0% | |
| ! | GGCCCATTTGAAATGCTATT+AGG | + | chr4_1:6161915-6161934 | None:intergenic | 40.0% |
| ! | TTCTGAAGACTTGACGCTTT+AGG | + | chr4_1:6160575-6160594 | None:intergenic | 40.0% |
| TCTACAAACCCAGTATCAAG+TGG | + | chr4_1:6162202-6162221 | None:intergenic | 40.0% | |
| ACTTGATACTGGGTTTGTAG+AGG | - | chr4_1:6162201-6162220 | Msa0532170:CDS | 40.0% | |
| GCCCTAATAGCACTTCAAAT+AGG | - | chr4_1:6162358-6162377 | Msa0532170:CDS | 40.0% | |
| ! | GGCCTATTTGAAGTGCTATT+AGG | + | chr4_1:6162363-6162382 | None:intergenic | 40.0% |
| CAAAGAGAAAGGGAAGATGT+CGG | - | chr4_1:6162469-6162488 | Msa0532170:CDS | 40.0% | |
| AGTGTCAAGTCTTCAGAAGA+AGG | - | chr4_1:6162497-6162516 | Msa0532170:CDS | 40.0% | |
| GCAACTTCCAACTCATTTGA+TGG | + | chr4_1:6162564-6162583 | None:intergenic | 40.0% | |
| ! | TTTAGAACTCAGGGGATGTA+AGG | - | chr4_1:6162836-6162855 | Msa0532170:intron | 40.0% |
| TATGGAGTGCAATGATAAGG+AGG | - | chr4_1:6162877-6162896 | Msa0532170:intron | 40.0% | |
| TGCAATGATAAGGAGGTTGA+AGG | - | chr4_1:6162884-6162903 | Msa0532170:intron | 40.0% | |
| TTAATGTTATGGTGTGGGTG+GGG | + | chr4_1:6162916-6162935 | None:intergenic | 40.0% | |
| GTTAATGTTATGGTGTGGGT+GGG | + | chr4_1:6162917-6162936 | None:intergenic | 40.0% | |
| TGTTAATGTTATGGTGTGGG+TGG | + | chr4_1:6162918-6162937 | None:intergenic | 40.0% | |
| ATGTTAAAAATCAGTGCCCG+AGG | - | chr4_1:6163076-6163095 | Msa0532170:intron | 40.0% | |
| TGTTAAAAATCAGTGCCCGA+GGG | - | chr4_1:6163077-6163096 | Msa0532170:intron | 40.0% | |
| ! | AGTTGGTCTGTAAGTTTGCT+TGG | - | chr4_1:6163541-6163560 | Msa0532170:intron | 40.0% |
| TTCTGATTCATTGACCCTCT+TGG | + | chr4_1:6163682-6163701 | None:intergenic | 40.0% | |
| AACTTTCCATCTGCATTCTG+TGG | + | chr4_1:6163712-6163731 | None:intergenic | 40.0% | |
| TTGCTTCAGATACAAGAGTC+AGG | - | chr4_1:6163811-6163830 | Msa0532170:intron | 40.0% | |
| !! | CCCGTTTTAATGTGAACAAG+TGG | - | chr4_1:6164003-6164022 | Msa0532170:intron | 40.0% |
| !! | ATTGGCATTCACGTTGATTC+TGG | - | chr4_1:6164081-6164100 | Msa0532170:CDS | 40.0% |
| ACATAATCAGACGGCTTAGT+GGG | + | chr4_1:6164155-6164174 | None:intergenic | 40.0% | |
| AAAATAGAGTCCCCTCAACT+GGG | + | chr4_1:6164180-6164199 | None:intergenic | 40.0% | |
| TGGTGTGGATTTCTTCTATG+GGG | + | chr4_1:6164244-6164263 | None:intergenic | 40.0% | |
| GTTGGTGTGGATTTCTTCTA+TGG | + | chr4_1:6164246-6164265 | None:intergenic | 40.0% | |
| AATGTTATACAACGTGGGAG+TGG | + | chr4_1:6164527-6164546 | None:intergenic | 40.0% | |
| TGCCCAAAGTAGTCCTTATA+AGG | - | chr4_1:6164601-6164620 | Msa0532170:intron | 40.0% | |
| ! | GAGCCTTATAAGGACTACTT+TGG | + | chr4_1:6164607-6164626 | None:intergenic | 40.0% |
| AAGTAGTCCTTATAAGGCTC+AGG | - | chr4_1:6164607-6164626 | Msa0532170:intron | 40.0% | |
| ! | CAAAAGTCCTGAGCCTTATA+AGG | + | chr4_1:6164617-6164636 | None:intergenic | 40.0% |
| ! | AGGACTTTTGATGTGTGTGT+TGG | - | chr4_1:6164627-6164646 | Msa0532170:intron | 40.0% |
| AACCCAAAAAGCTAGCTCAT+GGG | - | chr4_1:6164803-6164822 | Msa0532170:intron | 40.0% | |
| !!! | ATCCCATGAGCTAGCTTTTT+GGG | + | chr4_1:6164808-6164827 | None:intergenic | 40.0% |
| AGGAGTGACGAAACTTTCTA+CGG | - | chr4_1:6164836-6164855 | Msa0532170:CDS | 40.0% | |
| AAACTTTCTACGGACCACTT+TGG | - | chr4_1:6164846-6164865 | Msa0532170:CDS | 40.0% | |
| TTTGGCCATATCTTCGATGT+GGG | - | chr4_1:6164864-6164883 | Msa0532170:CDS | 40.0% | |
| !!! | TTTTTTTGGGGTGTGTGTGT+TGG | - | chr4_1:6165012-6165031 | Msa0532170:intron | 40.0% |
| CTTTGAACAACTAGTTGCAG+AGG | - | chr4_1:6165080-6165099 | Msa0532170:intron | 40.0% | |
| TAAGGGTAAGGGAAAATCCT+TGG | - | chr4_1:6165198-6165217 | Msa0532170:CDS | 40.0% | |
| ACTTCTCTTCCGTACTACAT+TGG | - | chr4_1:6165228-6165247 | Msa0532170:CDS | 40.0% | |
| GAGACTTCAAGATACAGATG+TGG | - | chr4_1:6165506-6165525 | Msa0532170:intron | 40.0% | |
| ATGAAGCAGGCCGTTTATAT+CGG | - | chr4_1:6165547-6165566 | Msa0532170:CDS | 40.0% | |
| ATGACGTCAATGAGTCTGAT+TGG | - | chr4_1:6165643-6165662 | Msa0532170:CDS | 40.0% | |
| AGCGGATACATCATACTAGT+GGG | - | chr4_1:6165823-6165842 | Msa0532170:intron | 40.0% | |
| ATCAAAGCTAGCTGCTTGAA+AGG | + | chr4_1:6165856-6165875 | None:intergenic | 40.0% | |
| CTAGGATATGCATCTAACAG+CGG | - | chr4_1:6165951-6165970 | Msa0532170:CDS | 40.0% | |
| TAGGATATGCATCTAACAGC+GGG | - | chr4_1:6165952-6165971 | Msa0532170:CDS | 40.0% | |
| ! | AGCCTGATTTGCAGACATTA+TGG | - | chr4_1:6165993-6166012 | Msa0532170:CDS | 40.0% |
| TGCCATAATGTCTGCAAATC+AGG | + | chr4_1:6165998-6166017 | None:intergenic | 40.0% | |
| AACACACAAAAAGGCCAATG+GGG | - | chr4_1:6166021-6166040 | Msa0532170:CDS | 40.0% | |
| TCCGCCACTTGTTTAAATTG+TGG | - | chr4_1:6166129-6166148 | Msa0532170:intron | 40.0% | |
| TGGGAAGCAATCATATATGC+AGG | - | chr4_1:6166283-6166302 | Msa0532170:intron | 40.0% | |
| GGGAAGCAATCATATATGCA+GGG | - | chr4_1:6166284-6166303 | Msa0532170:intron | 40.0% | |
| !!! | TATATGCAGGGTTTTGGAGA+AGG | - | chr4_1:6166296-6166315 | Msa0532170:intron | 40.0% |
| TATGCAGGAAATCAACAGTC+AGG | - | chr4_1:6166514-6166533 | Msa0532170:intron | 40.0% | |
| CGCTTGTATTAGGAAAGTGA+AGG | - | chr4_1:6166784-6166803 | Msa0532170:CDS | 40.0% | |
| CCAGTCTACTAGTGACATTA+GGG | + | chr4_1:6166986-6167005 | None:intergenic | 40.0% | |
| TCCAGTCTACTAGTGACATT+AGG | + | chr4_1:6166987-6167006 | None:intergenic | 40.0% | |
| ACAAAATCAACTGCACAAGC+AGG | + | chr4_1:6167010-6167029 | None:intergenic | 40.0% | |
| !! | GCTCGTTTGAAGCACTGTTA+TGG | + | chr4_1:6159328-6159347 | None:intergenic | 45.0% |
| GCTTTCATGGAGGAACACAT+AGG | + | chr4_1:6159350-6159369 | None:intergenic | 45.0% | |
| AGGTACCATGGCAAAGAGAA+AGG | - | chr4_1:6159426-6159445 | Msa0532170:exon | 45.0% | |
| GGTACCATGGCAAAGAGAAA+GGG | - | chr4_1:6159427-6159446 | Msa0532170:exon | 45.0% | |
| TCTTCCCTTTCTCTTTGCCA+TGG | + | chr4_1:6159434-6159453 | None:intergenic | 45.0% | |
| ATGGCAAAGAGAAAGGGAAG+AGG | - | chr4_1:6159433-6159452 | Msa0532170:exon | 45.0% | |
| ! | AGCGTCAAGTCTTCTGAAGA+AGG | - | chr4_1:6159465-6159484 | Msa0532170:CDS | 45.0% |
| TTTGTAGAGGAGCTGTAGTC+AGG | - | chr4_1:6159628-6159647 | Msa0532170:intron | 45.0% | |
| TTGTAGAGGAGCTGTAGTCA+GGG | - | chr4_1:6159629-6159648 | Msa0532170:intron | 45.0% | |
| ACTGTGTTCAAATCCCGGTA+AGG | + | chr4_1:6159735-6159754 | None:intergenic | 45.0% | |
| !!! | AAGGTAATTTTGGGGTGGCT+GGG | + | chr4_1:6159842-6159861 | None:intergenic | 45.0% |
| !!! | TAAGGTAATTTTGGGGTGGC+TGG | + | chr4_1:6159843-6159862 | None:intergenic | 45.0% |
| GAACAACACTTAACTGCCGT+TGG | - | chr4_1:6159954-6159973 | Msa0532170:CDS | 45.0% | |
| TTCTCTTAAGCTTCCCTGAG+TGG | + | chr4_1:6160002-6160021 | None:intergenic | 45.0% | |
| ! | GTGCTATTATGGCCCTGAAA+AGG | + | chr4_1:6160050-6160069 | None:intergenic | 45.0% |
| TGCTGAAGACTTGACGCTTT+AGG | + | chr4_1:6160196-6160215 | None:intergenic | 45.0% | |
| CCAACTCGTTTACCCAAATC+TGG | + | chr4_1:6160385-6160404 | None:intergenic | 45.0% | |
| CCAGATTTGGGTAAACGAGT+TGG | - | chr4_1:6160382-6160401 | Msa0532170:CDS | 45.0% | |
| !! | TTGGGTAAACGAGTTGGTTC+TGG | - | chr4_1:6160388-6160407 | Msa0532170:CDS | 45.0% |
| AGCGTCAAGTCTTCAGAAGA+AGG | - | chr4_1:6160577-6160596 | Msa0532170:CDS | 45.0% | |
| AGTTGATCCTGAGCTTGTAG+AGG | - | chr4_1:6160658-6160677 | Msa0532170:CDS | 45.0% | |
| GGGCCTTAGAACACTTCAAA+TGG | - | chr4_1:6160814-6160833 | Msa0532170:intron | 45.0% | |
| ! | GGCCCATTTGAAGTGTTCTA+AGG | + | chr4_1:6160820-6160839 | None:intergenic | 45.0% |
| AGCGTCTACTCTTCAGAAGA+AGG | - | chr4_1:6160953-6160972 | Msa0532170:intron | 45.0% | |
| TCTTGCTCCTCTACAAACTC+AGG | + | chr4_1:6161044-6161063 | None:intergenic | 45.0% | |
| AACACTTCAAATGGGCCTAC+AGG | - | chr4_1:6160444-6160463 | Msa0532170:intron | 45.0% | |
| AGGTACCATGGCAAAGAGAA+AGG | - | chr4_1:6159426-6159445 | Msa0532170:exon | 45.0% | |
| GGTACCATGGCAAAGAGAAA+GGG | - | chr4_1:6159427-6159446 | Msa0532170:exon | 45.0% | |
| TCTTCCCTTTCTCTTTGCCA+TGG | + | chr4_1:6159434-6159453 | None:intergenic | 45.0% | |
| ATGGCAAAGAGAAAGGGAAG+AGG | - | chr4_1:6159433-6159452 | Msa0532170:exon | 45.0% | |
| CAAAGAGAAAGGGAAGAGGT+CGG | - | chr4_1:6159437-6159456 | Msa0532170:exon | 45.0% | |
| AAGCAAGAGACAGGTACACA+TGG | - | chr4_1:6161409-6161428 | Msa0532170:intron | 45.0% | |
| AGTGTCAAGTCTTCAGAAGC+AGG | - | chr4_1:6161674-6161693 | Msa0532170:intron | 45.0% | |
| GTGTCAAGTCTTCAGAAGCA+GGG | - | chr4_1:6161675-6161694 | Msa0532170:intron | 45.0% | |
| TCTTGAGTTTGTAGAGGAGC+AGG | - | chr4_1:6161761-6161780 | Msa0532170:intron | 45.0% | |
| CCTGTTAACTCCTACCTTAC+CGG | - | chr4_1:6161819-6161838 | Msa0532170:intron | 45.0% | |
| CTGTTAACTCCTACCTTACC+GGG | - | chr4_1:6161820-6161839 | Msa0532170:intron | 45.0% | |
| CATTCAATTCCCGGTAAGGT+AGG | + | chr4_1:6161832-6161851 | None:intergenic | 45.0% | |
| ACTGCATTCAATTCCCGGTA+AGG | + | chr4_1:6161836-6161855 | None:intergenic | 45.0% | |
| TCTGGACTGCATTCAATTCC+CGG | + | chr4_1:6161841-6161860 | None:intergenic | 45.0% | |
| AGTTGATCCCGAGTTTGTAG+AGG | - | chr4_1:6162132-6162151 | Msa0532170:intron | 45.0% | |
| TGTCTCCTCCTCTACAAACT+CGG | + | chr4_1:6162143-6162162 | None:intergenic | 45.0% | |
| AACCCAGTATCAAGTGGAAC+AGG | + | chr4_1:6162196-6162215 | None:intergenic | 45.0% | |
| TACTGGGTTTGTAGAGGAGT+AGG | - | chr4_1:6162207-6162226 | Msa0532170:CDS | 45.0% | |
| AGGTTCCATGGCAAAGAGAA+AGG | - | chr4_1:6162458-6162477 | Msa0532170:CDS | 45.0% | |
| GGTTCCATGGCAAAGAGAAA+GGG | - | chr4_1:6162459-6162478 | Msa0532170:CDS | 45.0% | |
| TCTTCCCTTTCTCTTTGCCA+TGG | + | chr4_1:6159434-6159453 | None:intergenic | 45.0% | |
| AGATGATCCTGACTCTGTAG+AGG | - | chr4_1:6162629-6162648 | Msa0532170:intron | 45.0% | |
| TCAGGGGATGTAAGGTTGTT+GGG | - | chr4_1:6162844-6162863 | Msa0532170:intron | 45.0% | |
| TTCTTCCTTTCATACAGGGC+CGG | + | chr4_1:6163247-6163266 | None:intergenic | 45.0% | |
| ! | TATAGCCACGTAGTGGGATA+AGG | + | chr4_1:6163448-6163467 | None:intergenic | 45.0% |
| GCATTCTATAGCCACGTAGT+GGG | + | chr4_1:6163454-6163473 | None:intergenic | 45.0% | |
| TTGTTAATGCAAAGGGGACC+AGG | - | chr4_1:6163652-6163671 | Msa0532170:CDS | 45.0% | |
| TGTTAATGCAAAGGGGACCA+GGG | - | chr4_1:6163653-6163672 | Msa0532170:CDS | 45.0% | |
| AACCATCCACAGAATGCAGA+TGG | - | chr4_1:6163703-6163722 | Msa0532170:CDS | 45.0% | |
| TTCCATCTGCATTCTGTGGA+TGG | + | chr4_1:6163708-6163727 | None:intergenic | 45.0% | |
| AAGCGTAAACTGAGTCGAGA+TGG | - | chr4_1:6163882-6163901 | Msa0532170:intron | 45.0% | |
| ACTGAGTCGAGATGGAAAGT+TGG | - | chr4_1:6163890-6163909 | Msa0532170:intron | 45.0% | |
| TGATATTCATCCTACGAGGC+TGG | - | chr4_1:6163917-6163936 | Msa0532170:intron | 45.0% | |
| GTAATGAAGTCATTACGGCC+TGG | + | chr4_1:6163954-6163973 | None:intergenic | 45.0% | |
| GACATAATCAGACGGCTTAG+TGG | + | chr4_1:6164156-6164175 | None:intergenic | 45.0% | |
| AACTGGGGGACATAATCAGA+CGG | + | chr4_1:6164164-6164183 | None:intergenic | 45.0% | |
| TGATTATGTCCCCCAGTTGA+GGG | - | chr4_1:6164166-6164185 | Msa0532170:CDS | 45.0% | |
| AAATAGAGTCCCCTCAACTG+GGG | + | chr4_1:6164179-6164198 | None:intergenic | 45.0% | |
| CAAAATAGAGTCCCCTCAAC+TGG | + | chr4_1:6164181-6164200 | None:intergenic | 45.0% | |
| ! | CAGTTGAGGGGACTCTATTT+TGG | - | chr4_1:6164179-6164198 | Msa0532170:CDS | 45.0% |
| TTAATAACGTGGGGGCTTCA+AGG | - | chr4_1:6164217-6164236 | Msa0532170:intron | 45.0% | |
| GATGACATGAAACAGAGAGG+TGG | + | chr4_1:6164283-6164302 | None:intergenic | 45.0% | |
| GAGGATGACATGAAACAGAG+AGG | + | chr4_1:6164286-6164305 | None:intergenic | 45.0% | |
| CATGAAAATGAGCAAGGCAG+AGG | + | chr4_1:6164305-6164324 | None:intergenic | 45.0% | |
| GATGTGTGTGTTGGAAACAC+TGG | - | chr4_1:6164636-6164655 | Msa0532170:intron | 45.0% | |
| ATCATACATCCATGCCCCAA+AGG | - | chr4_1:6164676-6164695 | Msa0532170:intron | 45.0% | |
| ! | TGATGGTATGATGGAATGCC+AGG | + | chr4_1:6164748-6164767 | None:intergenic | 45.0% |
| CAACCCAAAAAGCTAGCTCA+TGG | - | chr4_1:6164802-6164821 | Msa0532170:intron | 45.0% | |
| !!! | CATCCCATGAGCTAGCTTTT+TGG | + | chr4_1:6164809-6164828 | None:intergenic | 45.0% |
| AGCTCATGGGATGACAAGTA+AGG | - | chr4_1:6164816-6164835 | Msa0532170:CDS | 45.0% | |
| CATCGAAGATATGGCCAAAG+TGG | + | chr4_1:6164863-6164882 | None:intergenic | 45.0% | |
| CTTTGGCCATATCTTCGATG+TGG | - | chr4_1:6164863-6164882 | Msa0532170:CDS | 45.0% | |
| TTGGCCATATCTTCGATGTG+GGG | - | chr4_1:6164865-6164884 | Msa0532170:CDS | 45.0% | |
| GAACAACTAGTTGCAGAGGT+TGG | - | chr4_1:6165084-6165103 | Msa0532170:intron | 45.0% | |
| AACTAGTTGCAGAGGTTGGA+AGG | - | chr4_1:6165088-6165107 | Msa0532170:intron | 45.0% | |
| !! | ACAGCGGGTTGGCTTAAAAT+AGG | - | chr4_1:6165111-6165130 | Msa0532170:intron | 45.0% |
| TGTGTCATGGCACAGTTGTA+AGG | - | chr4_1:6165180-6165199 | Msa0532170:CDS | 45.0% | |
| GTGTCATGGCACAGTTGTAA+GGG | - | chr4_1:6165181-6165200 | Msa0532170:CDS | 45.0% | |
| ATGGCACAGTTGTAAGGGTA+AGG | - | chr4_1:6165186-6165205 | Msa0532170:CDS | 45.0% | |
| TGGCACAGTTGTAAGGGTAA+GGG | - | chr4_1:6165187-6165206 | Msa0532170:CDS | 45.0% | |
| TACAAGTGGAAGAGCAGCTA+GGG | + | chr4_1:6165341-6165360 | None:intergenic | 45.0% | |
| CAGAACAAATGGAGCTTCTG+CGG | + | chr4_1:6165374-6165393 | None:intergenic | 45.0% | |
| ! | AGATACAGATGTGGTTCGGA+AGG | - | chr4_1:6165515-6165534 | Msa0532170:intron | 45.0% |
| AAGGCGATTATCGATGAAGC+AGG | - | chr4_1:6165534-6165553 | Msa0532170:intron | 45.0% | |
| AGTAATGCTCATGAAGCCTG+TGG | + | chr4_1:6165581-6165600 | None:intergenic | 45.0% | |
| GTCATCAGGGATATGCTTCA+AGG | + | chr4_1:6165628-6165647 | None:intergenic | 45.0% | |
| CAGACTCATTGACGTCATCA+GGG | + | chr4_1:6165641-6165660 | None:intergenic | 45.0% | |
| TCAGACTCATTGACGTCATC+AGG | + | chr4_1:6165642-6165661 | None:intergenic | 45.0% | |
| AGGCAAGTAAGGCAAAACAG+CGG | - | chr4_1:6165805-6165824 | Msa0532170:intron | 45.0% | |
| CAGCGGATACATCATACTAG+TGG | - | chr4_1:6165822-6165841 | Msa0532170:intron | 45.0% | |
| GAGTCTGCTAGAGAATTCTG+AGG | - | chr4_1:6166220-6166239 | Msa0532170:intron | 45.0% | |
| ! | GCTAGAGAATTCTGAGGATG+AGG | - | chr4_1:6166226-6166245 | Msa0532170:intron | 45.0% |
| ! | AGAGAATTCTGAGGATGAGG+TGG | - | chr4_1:6166229-6166248 | Msa0532170:intron | 45.0% |
| TGAGGATGAGGTGGAAGTAA+TGG | - | chr4_1:6166238-6166257 | Msa0532170:intron | 45.0% | |
| !!! | AGGGTTTTGGAGAAGGATTG+AGG | - | chr4_1:6166303-6166322 | Msa0532170:intron | 45.0% |
| AGGCTGAATTAGATGCCCAA+AGG | - | chr4_1:6166360-6166379 | Msa0532170:intron | 45.0% | |
| GGCTGAATTAGATGCCCAAA+GGG | - | chr4_1:6166361-6166380 | Msa0532170:intron | 45.0% | |
| TGAATTAGATGCCCAAAGGG+TGG | - | chr4_1:6166364-6166383 | Msa0532170:intron | 45.0% | |
| ! | TTGAGACAATGCTGACTGGA+TGG | + | chr4_1:6166549-6166568 | None:intergenic | 45.0% |
| TTATCACATCTTCCGCCTCA+TGG | + | chr4_1:6166735-6166754 | None:intergenic | 45.0% | |
| !!! | CGCTAGGAGCATCTATGTTT+TGG | - | chr4_1:6166919-6166938 | Msa0532170:five_prime_UTR | 45.0% |
| CCCTAATGTCACTAGTAGAC+TGG | - | chr4_1:6166983-6167002 | Msa0532170:five_prime_UTR | 45.0% | |
| !! | CTATAATATATTATAAATTA+TGG | + | chr4_1:6163367-6163386 | None:intergenic | 5.0% |
| !!! | TTCTTTTTTTTTTTTTTTTT+GGG | - | chr4_1:6164999-6165018 | Msa0532170:intron | 5.0% |
| !! | ACACAGTGCAAGTGTCGAAC+CGG | - | chr4_1:6159492-6159511 | Msa0532170:CDS | 50.0% |
| TCTTGGGTTTGTAGAGGAGC+AGG | - | chr4_1:6159552-6159571 | Msa0532170:intron | 50.0% | |
| CTTGGGTTTGTAGAGGAGCA+GGG | - | chr4_1:6159553-6159572 | Msa0532170:intron | 50.0% | |
| TTGGGTTTGTAGAGGAGCAG+GGG | - | chr4_1:6159554-6159573 | Msa0532170:intron | 50.0% | |
| ! | AGTGGCACTTAAGTACCGCT+TGG | + | chr4_1:6159984-6160003 | None:intergenic | 50.0% |
| ! | CGGTACTTAAGTGCCACTCA+GGG | - | chr4_1:6159986-6160005 | Msa0532170:CDS | 50.0% |
| AGCGTCAAGTCTTCAGCAGA+TGG | - | chr4_1:6160198-6160217 | Msa0532170:CDS | 50.0% | |
| ! | GCTTTCGTAGAGGAGCATGT+AGG | + | chr4_1:6160841-6160860 | None:intergenic | 50.0% |
| TTTGTAGAGGAGCAGGCAAC+AGG | - | chr4_1:6161768-6161787 | Msa0532170:intron | 50.0% | |
| GAGCAGGCAACAGGTACAAA+TGG | - | chr4_1:6161777-6161796 | Msa0532170:intron | 50.0% | |
| CCGGTAAGGTAGGAGTTAAC+AGG | + | chr4_1:6161822-6161841 | None:intergenic | 50.0% | |
| ! | GCTTTCATAGAGGAGCACGT+AGG | + | chr4_1:6161936-6161955 | None:intergenic | 50.0% |
| AGCGTCAAGTCTTCAGAAGC+AGG | - | chr4_1:6162051-6162070 | Msa0532170:intron | 50.0% | |
| TGATCCCGAGTTTGTAGAGG+AGG | - | chr4_1:6162135-6162154 | Msa0532170:intron | 50.0% | |
| GTCTCCTCCTCTACAAACTC+GGG | + | chr4_1:6162142-6162161 | None:intergenic | 50.0% | |
| GAGTTTGTAGAGGAGGAGAC+AGG | - | chr4_1:6162142-6162161 | Msa0532170:intron | 50.0% | |
| TCGCCTGTTCCACTTGATAC+TGG | - | chr4_1:6162190-6162209 | Msa0532170:CDS | 50.0% | |
| CGCCTGTTCCACTTGATACT+GGG | - | chr4_1:6162191-6162210 | Msa0532170:CDS | 50.0% | |
| GAGTAGGAGACACGTACACA+TGG | - | chr4_1:6162223-6162242 | Msa0532170:CDS | 50.0% | |
| AGTTGCTCCTGACGTTGTAG+AGG | - | chr4_1:6162578-6162597 | Msa0532170:CDS | 50.0% | |
| CTCAGGGGATGTAAGGTTGT+TGG | - | chr4_1:6162843-6162862 | Msa0532170:intron | 50.0% | |
| CAGGGGATGTAAGGTTGTTG+GGG | - | chr4_1:6162845-6162864 | Msa0532170:intron | 50.0% | |
| GGATGTAAGGTTGTTGGGGT+GGG | - | chr4_1:6162849-6162868 | Msa0532170:intron | 50.0% | |
| GATGTAAGGTTGTTGGGGTG+GGG | - | chr4_1:6162850-6162869 | Msa0532170:intron | 50.0% | |
| ATGTAAGGTTGTTGGGGTGG+GGG | - | chr4_1:6162851-6162870 | Msa0532170:intron | 50.0% | |
| TTGTTGGGGTGGGGGAATTA+TGG | - | chr4_1:6162859-6162878 | Msa0532170:intron | 50.0% | |
| AAAATCAGTGCCCGAGGGTA+AGG | - | chr4_1:6163082-6163101 | Msa0532170:intron | 50.0% | |
| GCCTCACATGCAGACACAAA+AGG | - | chr4_1:6163168-6163187 | Msa0532170:intron | 50.0% | |
| ! | GCCTTTTGTGTCTGCATGTG+AGG | + | chr4_1:6163172-6163191 | None:intergenic | 50.0% |
| CGCATTCTATAGCCACGTAG+TGG | + | chr4_1:6163455-6163474 | None:intergenic | 50.0% | |
| TATTCATCCTACGAGGCTGG+TGG | - | chr4_1:6163920-6163939 | Msa0532170:intron | 50.0% | |
| ! | AATCAGACGGCTTAGTGGGT+GGG | + | chr4_1:6164151-6164170 | None:intergenic | 50.0% |
| TAATCAGACGGCTTAGTGGG+TGG | + | chr4_1:6164152-6164171 | None:intergenic | 50.0% | |
| CTGATTATGTCCCCCAGTTG+AGG | - | chr4_1:6164165-6164184 | Msa0532170:CDS | 50.0% | |
| GATTATGTCCCCCAGTTGAG+GGG | - | chr4_1:6164167-6164186 | Msa0532170:CDS | 50.0% | |
| AATAGAGTCCCCTCAACTGG+GGG | + | chr4_1:6164178-6164197 | None:intergenic | 50.0% | |
| ! | GGTATGATGGAATGCCAGGA+TGG | + | chr4_1:6164744-6164763 | None:intergenic | 50.0% |
| GAGTCCCCACATCGAAGATA+TGG | + | chr4_1:6164872-6164891 | None:intergenic | 50.0% | |
| !! | GCGGGTTGGCTTAAAATAGG+AGG | - | chr4_1:6165114-6165133 | Msa0532170:intron | 50.0% |
| GGGTAAGGGAAAATCCTTGG+AGG | - | chr4_1:6165201-6165220 | Msa0532170:CDS | 50.0% | |
| GAAGAGAAGTCTCTCCTCCA+AGG | + | chr4_1:6165218-6165237 | None:intergenic | 50.0% | |
| GTACAAGTGGAAGAGCAGCT+AGG | + | chr4_1:6165342-6165361 | None:intergenic | 50.0% | |
| GCGGAGACACAAAGTACAAG+TGG | + | chr4_1:6165355-6165374 | None:intergenic | 50.0% | |
| CAGGCCGTTTATATCGGAGT+CGG | - | chr4_1:6165553-6165572 | Msa0532170:CDS | 50.0% | |
| ACAAAAAGGCCAATGGGGAG+TGG | - | chr4_1:6166026-6166045 | Msa0532170:CDS | 50.0% | |
| CAAAAAGGCCAATGGGGAGT+GGG | - | chr4_1:6166027-6166046 | Msa0532170:CDS | 50.0% | |
| CTCATTAACCCACTCCCCAT+TGG | + | chr4_1:6166038-6166057 | None:intergenic | 50.0% | |
| !! | CAATGGGGAGTGGGTTAATG+AGG | - | chr4_1:6166036-6166055 | Msa0532170:CDS | 50.0% |
| GGAAACTGCCTTTAAGTCGG+TGG | - | chr4_1:6166259-6166278 | Msa0532170:intron | 50.0% | |
| ACTGCCTTTAAGTCGGTGGT+TGG | - | chr4_1:6166263-6166282 | Msa0532170:intron | 50.0% | |
| CTGCCTTTAAGTCGGTGGTT+GGG | - | chr4_1:6166264-6166283 | Msa0532170:intron | 50.0% | |
| !! | CTTCCCAACCACCGACTTAA+AGG | + | chr4_1:6166270-6166289 | None:intergenic | 50.0% |
| ! | TGTTCGAGTTCAAGAGCTGC+AGG | - | chr4_1:6166340-6166359 | Msa0532170:intron | 50.0% |
| ATTAGATGCCCAAAGGGTGG+AGG | - | chr4_1:6166367-6166386 | Msa0532170:intron | 50.0% | |
| ATTCTCTGCCTCCACCCTTT+GGG | + | chr4_1:6166378-6166397 | None:intergenic | 50.0% | |
| GGACTCGACCTCAACAAGTT+TGG | + | chr4_1:6166429-6166448 | None:intergenic | 50.0% | |
| GCTTGAAGCACAACTCCATG+AGG | - | chr4_1:6166717-6166736 | Msa0532170:CDS | 50.0% | |
| TGAAGCACAACTCCATGAGG+CGG | - | chr4_1:6166720-6166739 | Msa0532170:CDS | 50.0% | |
| !! | AACTCTCGGAAGCATTCGCT+AGG | - | chr4_1:6166903-6166922 | Msa0532170:five_prime_UTR | 50.0% |
| TTTGTAGAGGAGCAGGGGAC+AGG | - | chr4_1:6159559-6159578 | Msa0532170:intron | 55.0% | |
| ! | AGTACCGCTTGGCTCTCCAA+CGG | + | chr4_1:6159973-6159992 | None:intergenic | 55.0% |
| ! | GCGGTACTTAAGTGCCACTC+AGG | - | chr4_1:6159985-6160004 | Msa0532170:CDS | 55.0% |
| !! | TCCTGAGTTGGTAGAGCAGC+AGG | - | chr4_1:6160285-6160304 | Msa0532170:intron | 55.0% |
| ACCTGCTGCTCTACCAACTC+AGG | + | chr4_1:6160289-6160308 | None:intergenic | 55.0% | |
| TTGGTAGAGCAGCAGGTGAC+AGG | - | chr4_1:6160292-6160311 | Msa0532170:intron | 55.0% | |
| ! | GCTTTCGTAGCGGAGCATGT+AGG | + | chr4_1:6160462-6160481 | None:intergenic | 55.0% |
| TCCTGAGCTTGTAGAGGAGC+AGG | - | chr4_1:6160664-6160683 | Msa0532170:CDS | 55.0% | |
| TCCTGCTCCTCTACAAGCTC+AGG | + | chr4_1:6160668-6160687 | None:intergenic | 55.0% | |
| CTTGTAGAGGAGCAGGAGAC+AGG | - | chr4_1:6160671-6160690 | Msa0532170:CDS | 55.0% | |
| GAGCAGGAGACAGGTACACA+TGG | - | chr4_1:6160680-6160699 | Msa0532170:CDS | 55.0% | |
| GCTTTCGTAGAGGAGCCTGT+AGG | + | chr4_1:6161196-6161215 | None:intergenic | 55.0% | |
| GAGGAGGAGACAGGTACACA+TGG | - | chr4_1:6162151-6162170 | Msa0532170:intron | 55.0% | |
| TCCTGACGTTGTAGAGGAGC+AGG | - | chr4_1:6162584-6162603 | Msa0532170:CDS | 55.0% | |
| TCCTGCTCCTCTACAACGTC+AGG | + | chr4_1:6162588-6162607 | None:intergenic | 55.0% | |
| TCCTGACTCTGTAGAGGAGC+AGG | - | chr4_1:6162635-6162654 | Msa0532170:intron | 55.0% | |
| TCCTGCTCCTCTACAGAGTC+AGG | + | chr4_1:6162639-6162658 | None:intergenic | 55.0% | |
| TCTGTAGAGGAGCAGGAGAC+AGG | - | chr4_1:6162642-6162661 | Msa0532170:intron | 55.0% | |
| GGGATGTAAGGTTGTTGGGG+TGG | - | chr4_1:6162848-6162867 | Msa0532170:intron | 55.0% | |
| ! | GCTTTAGTGGCCTTACCCTC+GGG | + | chr4_1:6163095-6163114 | None:intergenic | 55.0% |
| ! | GGCTTTAGTGGCCTTACCCT+CGG | + | chr4_1:6163096-6163115 | None:intergenic | 55.0% |
| GCCACTAAAGCCCTCGCTTT+AGG | - | chr4_1:6163104-6163123 | Msa0532170:intron | 55.0% | |
| ! | GCCTAAAGCGAGGGCTTTAG+TGG | + | chr4_1:6163108-6163127 | None:intergenic | 55.0% |
| TTGGTCCGGCCCTGTATGAA+AGG | - | chr4_1:6163239-6163258 | Msa0532170:intron | 55.0% | |
| ! | CCACGTAGTGGGATAAGGCT+TGG | + | chr4_1:6163443-6163462 | None:intergenic | 55.0% |
| ! | CCAAGCCTTATCCCACTACG+TGG | - | chr4_1:6163440-6163459 | Msa0532170:intron | 55.0% |
| ! | ATCAGACGGCTTAGTGGGTG+GGG | + | chr4_1:6164150-6164169 | None:intergenic | 55.0% |
| GCTATGCGACTACGTTGGTG+TGG | + | chr4_1:6164259-6164278 | None:intergenic | 55.0% | |
| GTGGAGCTATGCGACTACGT+TGG | + | chr4_1:6164264-6164283 | None:intergenic | 55.0% | |
| ACGCCTACCACTGGACCTTT+GGG | + | chr4_1:6164694-6164713 | None:intergenic | 55.0% | |
| GTAGGCGTGAGGGGATTTGT+TGG | - | chr4_1:6164706-6164725 | Msa0532170:intron | 55.0% | |
| GAATGCCAGGATGGCAGCAA+CGG | + | chr4_1:6164735-6164754 | None:intergenic | 55.0% | |
| TGCAGAGGTTGGAAGGACAG+CGG | - | chr4_1:6165095-6165114 | Msa0532170:intron | 55.0% | |
| !! | GGCGCCGACTCCGATATAAA+CGG | + | chr4_1:6165560-6165579 | None:intergenic | 55.0% |
| CAGGCTCCTTTCCAGTCACA+GGG | + | chr4_1:6165979-6165998 | None:intergenic | 55.0% | |
| TCAGGCTCCTTTCCAGTCAC+AGG | + | chr4_1:6165980-6165999 | None:intergenic | 55.0% | |
| CATTCTCTGCCTCCACCCTT+TGG | + | chr4_1:6166379-6166398 | None:intergenic | 55.0% | |
| TGTTGAGGTCGAGTCCCAAC+TGG | - | chr4_1:6166433-6166452 | Msa0532170:intron | 55.0% | |
| ACGGAAACGAGAGGAGAGTG+AGG | - | chr4_1:6166466-6166485 | Msa0532170:intron | 55.0% | |
| ACTGCCGTTGGAGAGCCAAG+CGG | - | chr4_1:6159966-6159985 | Msa0532170:CDS | 60.0% | |
| ! | GCTTTCGTAGAGGCGCACGT+AGG | + | chr4_1:6160083-6160102 | None:intergenic | 60.0% |
| CAGCAGGTGACAGGTGCACA+TGG | - | chr4_1:6160301-6160320 | Msa0532170:intron | 60.0% | |
| ! | AGCCCTCGCTTTAGGCCTAC+CGG | - | chr4_1:6163112-6163131 | Msa0532170:intron | 60.0% |
| TGCCGGTAGGCCTAAAGCGA+GGG | + | chr4_1:6163117-6163136 | None:intergenic | 60.0% | |
| TTGCCGGTAGGCCTAAAGCG+AGG | + | chr4_1:6163118-6163137 | None:intergenic | 60.0% | |
| ATTGACCCTCTTGGTCGCCC+TGG | + | chr4_1:6163673-6163692 | None:intergenic | 60.0% | |
| TCCATGCCCCAAAGGTCCAG+TGG | - | chr4_1:6164684-6164703 | Msa0532170:intron | 60.0% | |
| !! | ACCACTGGACCTTTGGGGCA+TGG | + | chr4_1:6164688-6164707 | None:intergenic | 60.0% |
| TGCCCCAAAGGTCCAGTGGT+AGG | - | chr4_1:6164688-6164707 | Msa0532170:intron | 60.0% | |
| CGCCTACCACTGGACCTTTG+GGG | + | chr4_1:6164693-6164712 | None:intergenic | 60.0% | |
| CACGCCTACCACTGGACCTT+TGG | + | chr4_1:6164695-6164714 | None:intergenic | 60.0% | |
| AAGGTCCAGTGGTAGGCGTG+AGG | - | chr4_1:6164695-6164714 | Msa0532170:intron | 60.0% | |
| AGGTCCAGTGGTAGGCGTGA+GGG | - | chr4_1:6164696-6164715 | Msa0532170:intron | 60.0% | |
| AATCCCCTCACGCCTACCAC+TGG | + | chr4_1:6164703-6164722 | None:intergenic | 60.0% | |
| GGGACTCAGCGTAACCCCTA+TGG | - | chr4_1:6164885-6164904 | Msa0532170:CDS | 60.0% | |
| GCAGAGGTTGGAAGGACAGC+GGG | - | chr4_1:6165096-6165115 | Msa0532170:intron | 60.0% | |
| AGGTTGGAAGGACAGCGGGT+TGG | - | chr4_1:6165100-6165119 | Msa0532170:intron | 60.0% | |
| TATATCGGAGTCGGCGCCAC+AGG | - | chr4_1:6165562-6165581 | Msa0532170:CDS | 60.0% | |
| TAACAGCGGGACCCTGTGAC+TGG | - | chr4_1:6165965-6165984 | Msa0532170:CDS | 60.0% | |
| GGGTGGAGGCAGAGAATGCT+AGG | - | chr4_1:6166381-6166400 | Msa0532170:intron | 60.0% | |
| AGAGGAGCGACGGAAACGAG+AGG | - | chr4_1:6166457-6166476 | Msa0532170:intron | 60.0% | |
| CCTACAGCCACCAGCCTCGT+AGG | + | chr4_1:6163930-6163949 | None:intergenic | 65.0% | |
| CCTACGAGGCTGGTGGCTGT+AGG | - | chr4_1:6163927-6163946 | Msa0532170:intron | 65.0% | |
| AGGCTGGTGGCTGTAGGTCC+AGG | - | chr4_1:6163933-6163952 | Msa0532170:intron | 65.0% | |
| GGTCCAGTGGTAGGCGTGAG+GGG | - | chr4_1:6164697-6164716 | Msa0532170:intron | 65.0% | |
| GGAGACCGTTGCTGCCATCC+TGG | - | chr4_1:6164727-6164746 | Msa0532170:intron | 65.0% | |
| GCGGGACCCTGTGACTGGAA+AGG | - | chr4_1:6165970-6165989 | Msa0532170:CDS | 65.0% | |
| GGTCGAGTCCCAACTGGCAG+AGG | - | chr4_1:6166439-6166458 | Msa0532170:intron | 65.0% | |
| CCGTCGCTCCTCTGCCAGTT+GGG | + | chr4_1:6166450-6166469 | None:intergenic | 65.0% | |
| CCCAACTGGCAGAGGAGCGA+CGG | - | chr4_1:6166447-6166466 | Msa0532170:intron | 65.0% | |
| TCCGTCGCTCCTCTGCCAGT+TGG | + | chr4_1:6166451-6166470 | None:intergenic | 65.0% | |
| AGGGGACCAGGGCGACCAAG+AGG | - | chr4_1:6163664-6163683 | Msa0532170:CDS | 70.0% | |
| GGGGACCAGGGCGACCAAGA+GGG | - | chr4_1:6163665-6163684 | Msa0532170:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 6159135 | 6167101 | 6159135 | ID=Msa0532170;Name=Msa0532170 |
| chr4_1 | mRNA | 6159135 | 6167101 | 6159135 | ID=Msa0532170-mRNA-1;Parent=Msa0532170;Name=Msa0532170-mRNA-1;_AED=0.10;_eAED=0.10;_QI=298|0.78|0.86|1|1|1|15|306|899 |
| chr4_1 | exon | 6159135 | 6159566 | 6159135 | ID=Msa0532170-mRNA-1:exon:2211;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6159656 | 6160042 | 6159656 | ID=Msa0532170-mRNA-1:exon:2210;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6160161 | 6160265 | 6160161 | ID=Msa0532170-mRNA-1:exon:2209;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6160358 | 6160450 | 6160358 | ID=Msa0532170-mRNA-1:exon:2208;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6160532 | 6160738 | 6160532 | ID=Msa0532170-mRNA-1:exon:2207;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6160849 | 6160905 | 6160849 | ID=Msa0532170-mRNA-1:exon:2206;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6162163 | 6162620 | 6162163 | ID=Msa0532170-mRNA-1:exon:2205;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6163573 | 6163776 | 6163573 | ID=Msa0532170-mRNA-1:exon:2204;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6164073 | 6164222 | 6164073 | ID=Msa0532170-mRNA-1:exon:2203;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6164447 | 6164599 | 6164447 | ID=Msa0532170-mRNA-1:exon:2202;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6164815 | 6164967 | 6164815 | ID=Msa0532170-mRNA-1:exon:2201;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6165168 | 6165320 | 6165168 | ID=Msa0532170-mRNA-1:exon:2200;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6165544 | 6165696 | 6165544 | ID=Msa0532170-mRNA-1:exon:2199;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6165923 | 6166075 | 6165923 | ID=Msa0532170-mRNA-1:exon:2198;Parent=Msa0532170-mRNA-1 |
| chr4_1 | exon | 6166656 | 6167101 | 6166656 | ID=Msa0532170-mRNA-1:exon:2197;Parent=Msa0532170-mRNA-1 |
| chr4_1 | five_prime_UTR | 6166804 | 6167101 | 6166804 | ID=Msa0532170-mRNA-1:five_prime_utr;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6166656 | 6166803 | 6166656 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6165923 | 6166075 | 6165923 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6165544 | 6165696 | 6165544 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6165168 | 6165320 | 6165168 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6164815 | 6164967 | 6164815 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6164447 | 6164599 | 6164447 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6164073 | 6164222 | 6164073 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6163573 | 6163776 | 6163573 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6162163 | 6162620 | 6162163 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6160849 | 6160905 | 6160849 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6160532 | 6160738 | 6160532 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6160358 | 6160450 | 6160358 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6160161 | 6160265 | 6160161 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6159656 | 6160042 | 6159656 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | CDS | 6159441 | 6159566 | 6159441 | ID=Msa0532170-mRNA-1:cds;Parent=Msa0532170-mRNA-1 |
| chr4_1 | three_prime_UTR | 6159135 | 6159440 | 6159135 | ID=Msa0532170-mRNA-1:three_prime_utr;Parent=Msa0532170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
