AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0352000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0352000 MtrunA17_Chr3g0086881 91.011 623 52 1 461 1083 2 620 0.0 1140
Msa0352000 MtrunA17_Chr3g0086881 71.985 539 50 6 1 446 65 595 0.0 692
Msa0352000 MtrunA17_Chr7g0219041 40.441 680 357 8 448 1082 1 677 6.25e-168 510
Msa0352000 MtrunA17_Chr7g0219041 35.140 535 247 12 12 446 119 653 2.46e-82 282
Msa0352000 MtrunA17_Chr4g0057561 37.918 538 307 8 566 1082 160 691 1.14e-109 357
Msa0352000 MtrunA17_Chr4g0057561 31.099 537 262 18 15 445 132 666 6.67e-55 204
Msa0352000 MtrunA17_Chr8g0344461 34.835 577 328 11 538 1077 46 611 8.86e-96 317
Msa0352000 MtrunA17_Chr8g0344461 27.667 553 273 17 15 446 46 592 7.19e-41 160
Msa0352000 MtrunA17_Chr7g0224041 34.842 442 272 7 655 1083 221 659 5.90e-82 281
Msa0352000 MtrunA17_Chr7g0224041 24.299 535 303 15 3 444 110 635 3.84e-26 115
Msa0352000 MtrunA17_Chr1g0197101 30.373 563 336 12 538 1069 102 639 1.97e-80 276
Msa0352000 MtrunA17_Chr1g0197101 24.820 556 287 15 3 446 92 628 5.95e-30 127
Msa0352000 MtrunA17_Chr5g0431731 30.962 520 339 9 569 1075 125 637 3.58e-79 272
Msa0352000 MtrunA17_Chr5g0431731 23.178 535 298 13 12 444 95 618 5.07e-32 133
Msa0352000 MtrunA17_Chr1g0177671 30.534 524 315 8 568 1069 127 623 3.05e-77 267
Msa0352000 MtrunA17_Chr1g0177671 23.941 543 291 13 3 445 91 611 7.22e-30 127
Msa0352000 MtrunA17_Chr6g0462011 30.975 523 329 8 568 1073 220 727 2.09e-74 261
Msa0352000 MtrunA17_Chr6g0462011 23.785 391 202 8 142 444 328 710 4.72e-23 105
Msa0352000 MtrunA17_Chr3g0106431 32.880 441 279 6 644 1075 191 623 6.78e-72 251
Msa0352000 MtrunA17_Chr3g0106431 24.813 536 299 14 10 452 84 608 2.83e-26 115
Msa0352000 MtrunA17_Chr5g0431741 31.209 455 302 5 630 1075 244 696 3.97e-65 234
Msa0352000 MtrunA17_Chr5g0431741 24.682 393 215 12 128 444 290 677 4.33e-20 96.3
Msa0352000 MtrunA17_Chr2g0327741 30.443 542 341 11 535 1070 69 580 3.04e-64 229
Msa0352000 MtrunA17_Chr2g0327741 24.500 400 223 10 109 429 153 552 2.55e-19 93.2
Msa0352000 MtrunA17_Chr1g0182031 28.626 524 323 12 572 1069 101 599 3.13e-57 209
Msa0352000 MtrunA17_Chr1g0182031 22.687 335 194 10 14 294 70 393 3.11e-13 73.9
Msa0352000 MtrunA17_Chr1g0182041 26.993 552 362 14 537 1071 75 602 2.08e-56 206
Msa0352000 MtrunA17_Chr1g0182041 25.000 304 163 13 45 294 103 395 6.80e-14 76.3
Msa0352000 MtrunA17_Chr4g0030621 28.599 514 341 9 571 1070 102 603 3.02e-56 206
Msa0352000 MtrunA17_Chr4g0030621 26.724 348 188 11 12 303 73 409 1.08e-18 91.7
Msa0352000 MtrunA17_Chr1g0214001 28.986 552 334 9 568 1069 123 666 1.05e-55 206
Msa0352000 MtrunA17_Chr5g0431811 27.111 450 283 9 644 1083 287 701 6.74e-42 167
Msa0352000 MtrunA17_Chr5g0431811 28.994 169 113 3 907 1069 899 1066 5.77e-11 67.0
Msa0352000 MtrunA17_Chr5g0432091 25.333 450 313 7 639 1069 256 701 4.30e-40 159
Msa0352000 MtrunA17_Chr5g0432041 25.799 438 298 9 644 1069 251 673 2.26e-31 132
Msa0352000 MtrunA17_Chr1g0147911 24.117 651 403 18 462 1082 73 662 2.54e-31 131
Msa0352000 MtrunA17_Chr5g0431761 28.269 283 202 1 638 920 253 534 2.65e-30 127
Msa0352000 MtrunA17_Chr5g0431761 25.000 296 178 7 132 396 295 577 1.75e-14 77.8
Msa0352000 MtrunA17_Chr3g0104851 26.106 452 287 13 639 1069 241 666 6.93e-29 124
Msa0352000 MtrunA17_Chr4g0002391 28.424 387 245 12 706 1078 278 646 1.19e-26 117
Msa0352000 MtrunA17_Chr1g0152401 26.630 368 244 10 698 1043 303 666 6.10e-25 111
Msa0352000 MtrunA17_Chr2g0300651 27.034 381 249 12 712 1079 281 645 7.74e-23 104
Msa0352000 MtrunA17_Chr5g0431871 31.548 168 113 1 644 809 1 168 1.02e-22 97.1
Msa0352000 MtrunA17_Chr5g0431971 25.796 314 203 10 766 1069 30 323 5.55e-15 77.8
Msa0352000 MtrunA17_Chr5g0431881 28.402 169 114 3 907 1069 54 221 1.16e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0352000 AT5G61010.1 42.265 627 342 7 469 1082 20 639 5.44e-154 473
Msa0352000 AT5G61010.1 35.568 537 248 8 2 445 81 612 1.62e-84 287
Msa0352000 AT5G61010.2 42.265 627 342 7 469 1082 20 639 5.44e-154 473
Msa0352000 AT5G61010.2 35.568 537 248 8 2 445 81 612 1.62e-84 287
Msa0352000 AT3G29400.1 37.462 662 360 13 463 1082 9 658 5.93e-129 407
Msa0352000 AT3G29400.1 33.501 397 184 12 15 338 97 486 6.20e-47 179
Msa0352000 AT5G50380.1 38.276 580 306 10 535 1082 123 682 1.83e-122 391
Msa0352000 AT5G50380.1 31.993 547 247 18 12 445 123 657 2.38e-58 214
Msa0352000 AT3G14090.1 34.807 543 309 9 571 1076 86 620 1.48e-98 325
Msa0352000 AT3G14090.1 26.255 518 264 13 44 446 86 600 2.20e-32 135
Msa0352000 AT1G54090.1 32.650 585 333 9 538 1077 49 617 5.51e-90 302
Msa0352000 AT1G54090.1 26.195 565 269 14 15 446 49 598 1.77e-35 144
Msa0352000 AT1G72470.1 33.390 587 329 10 538 1077 56 627 3.06e-88 298
Msa0352000 AT1G72470.1 28.321 399 198 9 132 446 214 608 3.24e-35 144
Msa0352000 AT5G03540.2 32.588 537 310 8 556 1069 6 513 4.16e-85 286
Msa0352000 AT5G03540.2 25.613 367 187 11 29 337 6 344 6.08e-19 92.4
Msa0352000 AT5G03540.1 31.777 557 326 9 538 1069 101 628 1.49e-84 288
Msa0352000 AT5G03540.1 25.063 399 205 13 3 337 91 459 8.24e-19 92.4
Msa0352000 AT5G03540.3 30.716 573 337 9 538 1069 101 654 7.02e-82 281
Msa0352000 AT5G03540.3 24.337 415 214 12 3 337 91 485 7.07e-18 89.4
Msa0352000 AT5G52340.1 31.061 528 323 10 556 1069 121 621 1.26e-75 263
Msa0352000 AT5G52340.1 23.497 549 284 16 3 445 91 609 2.56e-27 119
Msa0352000 AT5G58430.1 33.257 436 272 7 644 1072 196 619 3.67e-73 255
Msa0352000 AT5G58430.1 23.925 535 289 12 12 446 89 605 8.82e-30 127
Msa0352000 AT1G07000.1 28.659 649 367 18 463 1072 6 597 3.88e-71 249
Msa0352000 AT1G07000.1 27.255 521 272 18 10 446 86 583 3.71e-29 124
Msa0352000 AT5G13150.1 31.070 486 303 8 614 1076 173 649 2.80e-66 236
Msa0352000 AT5G13990.1 31.731 520 326 12 565 1069 174 679 2.93e-64 232
Msa0352000 AT5G13990.1 27.307 531 275 22 13 444 148 666 2.01e-23 107
Msa0352000 AT1G07725.1 29.381 565 347 13 538 1083 72 603 3.10e-64 230
Msa0352000 AT3G09520.1 28.942 539 348 10 552 1071 84 606 1.27e-61 223
Msa0352000 AT3G09520.1 25.581 344 184 9 14 299 73 402 1.18e-18 92.0
Msa0352000 AT2G28640.1 30.233 516 324 11 569 1075 94 582 1.95e-61 221
Msa0352000 AT2G28640.1 24.145 497 263 16 17 422 69 542 6.43e-18 89.4
Msa0352000 AT5G59730.2 30.275 545 341 11 550 1072 72 599 3.50e-61 221
Msa0352000 AT5G59730.2 23.574 526 259 17 12 423 61 557 7.64e-18 89.4
Msa0352000 AT5G59730.1 30.275 545 341 11 550 1072 72 599 4.79e-61 221
Msa0352000 AT5G59730.1 23.574 526 259 17 12 423 61 557 6.46e-18 89.4
Msa0352000 AT2G39380.1 28.627 517 343 8 572 1073 107 612 2.19e-60 219
Msa0352000 AT2G39380.1 22.634 486 264 12 45 432 107 578 8.05e-20 95.5
Msa0352000 AT3G55150.1 29.231 520 336 8 572 1073 107 612 5.71e-57 209
Msa0352000 AT5G52350.1 28.226 496 321 9 589 1070 102 576 1.22e-54 201
Msa0352000 AT2G28650.1 29.808 416 278 5 655 1069 152 554 3.23e-48 182
Msa0352000 AT2G28650.1 25.199 377 192 11 125 433 177 531 1.09e-15 82.0
Msa0352000 AT3G09530.1 25.465 538 369 9 550 1069 77 600 6.96e-48 182
Msa0352000 AT3G09530.1 24.528 318 191 8 17 288 71 385 1.28e-15 82.0
Msa0352000 AT4G31540.1 25.566 442 297 9 650 1073 231 658 7.51e-33 137
Msa0352000 AT1G51640.1 24.777 448 291 14 652 1070 196 626 3.88e-21 99.8

Find 147 sgRNAs with CRISPR-Local

Find 831 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAATTTCTTTGGAGATTTC+TGG 0.100464 3_1:-19643640 Msa0352000:CDS
GCAATTTATTTGGAGATTTC+TGG 0.101249 3_1:-19655022 Msa0352000:CDS
TGATCTACAATGTTATATTT+TGG 0.148649 3_1:-19643300 Msa0352000:CDS
TACCGAACTCCGAGATATTT+TGG 0.173433 3_1:+19644228 None:intergenic
GGAGAAACAAAGCTGATAAA+TGG 0.222224 3_1:+19644249 None:intergenic
AAAACCCTATGTAATTTCTT+TGG 0.238723 3_1:-19643650 Msa0352000:CDS
CATCGAAAATGTGCTTAAAT+TGG 0.243970 3_1:-19644389 Msa0352000:CDS
CATCGACAATTAGAAGATTA+AGG 0.252964 3_1:+19643879 None:intergenic
CATCGACAATTAGAAGATTA+AGG 0.252964 3_1:+19655261 None:intergenic
GCCATATCTTCATCAGTTCT+AGG 0.258626 3_1:-19644462 Msa0352000:CDS
CATCGAAAATGTGCTTAAAA+TGG 0.261889 3_1:-19655771 Msa0352000:CDS
ATCAAGGCACTTGTTGAATA+TGG 0.262018 3_1:-19643908 Msa0352000:CDS
ATCAAGGCACTTGTTGAATA+TGG 0.262018 3_1:-19655290 Msa0352000:CDS
ACTTGACATGTATGAGGTTT+TGG 0.277794 3_1:-19644137 Msa0352000:CDS
TTTGTTGCAAAGTTTGAGTT+AGG 0.281815 3_1:+19644836 None:intergenic
CGGCCTCACCAAAATTTAAA+AGG 0.284169 3_1:+19644200 None:intergenic
TCTTCGCGAAGTTCTTTATC+AGG 0.287927 3_1:+19643425 None:intergenic
TCTTCGCGAAGTTCTTTATC+AGG 0.287927 3_1:+19654807 None:intergenic
ATGAGTTTGGAGACAAATAT+TGG 0.301189 3_1:-19644907 Msa0352000:CDS
CCAGGAAAACATTTATTTGA+TGG 0.305526 3_1:+19643971 None:intergenic
CCAGGAAAACATTTATTTGA+TGG 0.305526 3_1:+19655353 None:intergenic
TGAGAATGGTGCAAAGATTT+TGG 0.309875 3_1:+19643260 None:intergenic
CAATTGTGTAAGCAGATTCT+TGG 0.317014 3_1:-19644283 Msa0352000:CDS
CACAAACTTCTAAGAAGCTT+TGG 0.327792 3_1:-19644046 Msa0352000:CDS
CACAAACTTCTAAGAAGCTT+TGG 0.327792 3_1:-19655428 Msa0352000:CDS
TGAAGATAAGGTAATGAGTT+TGG 0.328772 3_1:-19644920 Msa0352000:CDS
TGAAGATAAGGTAATGAGTT+TGG 0.328772 3_1:-19656290 None:intergenic
TTTGATTGATTGAACACAAT+TGG 0.329865 3_1:+19644989 None:intergenic
GCAAGATAAAGAAATGGATT+TGG 0.330593 3_1:-19644348 Msa0352000:CDS
AACTGAACCTCGAGATATTT+CGG 0.338257 3_1:+19655610 None:intergenic
GTTCAATTGCTTGCAACTTA+AGG 0.341266 3_1:-19643796 Msa0352000:CDS
GTTCAATTGCTTGCAACTTA+AGG 0.341266 3_1:-19655178 Msa0352000:CDS
AGTTGTTATGTCAAGGCTTA+AGG 0.343431 3_1:-19656128 Msa0352000:CDS
GAACTTGTTCAAAGAGCTAA+TGG 0.347236 3_1:-19644778 Msa0352000:CDS
GAAGTATACAAAACACAAAC+AGG 0.347813 3_1:-19654840 Msa0352000:CDS
CCCAAATCCATTTCTTTATC+CGG 0.349318 3_1:+19655729 None:intergenic
CAAAAGTTTGATTCTGTGAA+TGG 0.352739 3_1:-19644817 Msa0352000:CDS
CAAAAGTTTGATTCTGTGAA+TGG 0.352739 3_1:-19656199 Msa0352000:CDS
ATACACAATATCAACTCTAT+TGG 0.354741 3_1:+19644657 None:intergenic
ATACACAATATCAACTCTAT+TGG 0.354741 3_1:+19656039 None:intergenic
TTGAGATCTTCAAGTATAGA+AGG 0.357814 3_1:+19655914 None:intergenic
GCCGGATAAAGAAATGGATT+TGG 0.358377 3_1:-19655730 Msa0352000:CDS
TCTTCACAAGCTGAGATCAT+AGG 0.372051 3_1:+19645114 None:intergenic
GGCGAGCAGTACTATTGATT+TGG 0.376403 3_1:-19655942 Msa0352000:CDS
CAAGATAAAGAAATGGATTT+GGG 0.378488 3_1:-19644347 Msa0352000:CDS
TCGCGAAGATCTACAAATAT+CGG 0.379075 3_1:-19643411 Msa0352000:CDS
TCGCGAAGATCTACAAATAT+CGG 0.379075 3_1:-19654793 Msa0352000:CDS
TCCTAGAACTGATGAAGATA+TGG 0.393569 3_1:+19644461 None:intergenic
AGCGAGCAGTGCTATAGATT+TGG 0.401050 3_1:-19644560 Msa0352000:CDS
ATTGTGTATGATGGATCATT+TGG 0.401464 3_1:-19644643 Msa0352000:CDS
ATTGTGTATGATGGATCATT+TGG 0.401464 3_1:-19656025 Msa0352000:CDS
CATTCATTACATGGTTCAAA+AGG 0.407674 3_1:-19643684 Msa0352000:CDS
ATCTATAGCACTGCTCGCTT+CGG 0.413945 3_1:+19644564 None:intergenic
CCGGATAAAGAAATGGATTT+GGG 0.420824 3_1:-19655729 Msa0352000:CDS
CTTGGATTTGTTGCACAAGT+TGG 0.424158 3_1:+19643751 None:intergenic
CTTGGATTTGTTGCACAAGT+TGG 0.424158 3_1:+19655133 None:intergenic
TTCACTTTCTATGTTGAGAA+TGG 0.431758 3_1:+19643246 None:intergenic
CTCCAAAATATCTCGGAGTT+CGG 0.439692 3_1:-19644230 Msa0352000:CDS
TGCTTCAAGGAGAGAAGCCT+TGG 0.450661 3_1:-19655831 Msa0352000:intron
AAGCAGATTCTCGGAGACTT+TGG 0.454981 3_1:-19655656 Msa0352000:CDS
TGCAGCTCAACACATTATAA+AGG 0.458305 3_1:-19645073 Msa0352000:CDS
GAATCAAAAGACATATAATC+AGG 0.459827 3_1:+19644679 None:intergenic
GCTTAAATGTGTTGAAGATA+AGG 0.460156 3_1:-19644932 Msa0352000:CDS
CAATTGTGTAAGCAGATTCT+CGG 0.463987 3_1:-19655665 Msa0352000:CDS
TGAGAAGTGGATTAAGTATA+CGG 0.464454 3_1:-19643327 Msa0352000:CDS
TGAGAAGTGGATCAAGTATA+CGG 0.464642 3_1:-19654709 Msa0352000:intron
GGAGAAACAAAACTGATAAA+CGG 0.464846 3_1:+19655631 None:intergenic
CAGTTCTAGGAGAGAAGCCT+TGG 0.468878 3_1:-19644449 Msa0352000:CDS
GAATTGAAAGACATGTAATC+AGG 0.471319 3_1:+19656061 None:intergenic
TGAATCGCAAGATAAAGAAA+TGG 0.475005 3_1:-19644354 Msa0352000:CDS
GTCAAGGCTTAAGGATGAGT+TGG 0.479252 3_1:-19656119 Msa0352000:CDS
TTTGTTTCTCCAAAATATCT+CGG 0.480530 3_1:-19644237 Msa0352000:CDS
TTGTTTACTTGACATGTATG+AGG 0.480736 3_1:-19644143 Msa0352000:CDS
GAAATGGATTTGGGCGATGA+AGG 0.482082 3_1:-19655720 Msa0352000:CDS
TTTGGTGAGGCCGTAACAAT+GGG 0.483386 3_1:-19644190 Msa0352000:CDS
GTTTGTTTCAAATTACCATC+AGG 0.487592 3_1:-19644491 Msa0352000:CDS
TGAATCGCCGGATAAAGAAA+TGG 0.490537 3_1:-19655736 Msa0352000:CDS
CCGGTATAACTTCGGTAAGC+AGG 0.491544 3_1:+19643371 None:intergenic
CCGGTATAACTTCGGTAAGC+AGG 0.491544 3_1:+19654753 None:intergenic
GTCAAGGCTTGAGGATGAGT+TGG 0.492679 3_1:-19644737 Msa0352000:CDS
ATCGTTCATACGTATCTAGT+TGG 0.494827 3_1:-19644313 Msa0352000:CDS
GAAGTATACAAAACACAGAC+AGG 0.498418 3_1:-19643458 Msa0352000:CDS
AGCAACATCAGTGTATAACT+TGG 0.499600 3_1:+19643733 None:intergenic
GAATGGAAATTTGAAGCATA+AGG 0.507338 3_1:-19644800 Msa0352000:CDS
GAATGGAAATTTGAAGCATA+AGG 0.507338 3_1:-19656182 Msa0352000:CDS
CCTGCTTACCGAAGTTATAC+CGG 0.507813 3_1:-19643371 Msa0352000:CDS
CCTGCTTACCGAAGTTATAC+CGG 0.507813 3_1:-19654753 Msa0352000:CDS
TTGTTGCAAAGTTTGAGTTA+GGG 0.513478 3_1:+19644837 None:intergenic
CGTCTAACATTGATGAGAAG+TGG 0.516919 3_1:-19643340 Msa0352000:CDS
CGTCTAACATTGATGAGAAG+TGG 0.516919 3_1:-19654722 Msa0352000:CDS
AGAGTTGATATTGTGTATGA+TGG 0.520793 3_1:-19644652 Msa0352000:CDS
AGAGTTGATATTGTGTATGA+TGG 0.520793 3_1:-19656034 Msa0352000:CDS
TTCTGGCTTCGCCGACATGT+TGG 0.524938 3_1:-19655005 Msa0352000:CDS
GATGAATAACATTCATTACA+TGG 0.527155 3_1:-19643693 Msa0352000:CDS
GAGGAAAGTTTATCGAATTG+TGG 0.528033 3_1:-19654915 Msa0352000:CDS
AATCTCCAAAGAAATTACAT+AGG 0.528067 3_1:+19643645 None:intergenic
AAAATATCAACGAGGTTTCG+AGG 0.528128 3_1:-19655988 Msa0352000:CDS
AGTGGCACTGCTTGAATCGC+CGG 0.529546 3_1:-19655748 Msa0352000:CDS
TCATGACATATCTTGTAAGA+TGG 0.530309 3_1:+19643936 None:intergenic
TCATGACATATCTTGTAAGA+TGG 0.530309 3_1:+19655318 None:intergenic
ATCTCCAAAGAAATTACATA+GGG 0.535733 3_1:+19643646 None:intergenic
TGGATCATTTGGTTCAATTG+AGG 0.538106 3_1:-19644632 Msa0352000:CDS
TGGATCATTTGGTTCAATTG+AGG 0.538106 3_1:-19656014 Msa0352000:CDS
TAGTACTGCTCGCCTCGGAT+TGG 0.539033 3_1:+19655951 None:intergenic
TTCTGGCTTCGCCAACATGT+TGG 0.541758 3_1:-19643623 Msa0352000:CDS
TTTGTATACTTCACCAAAAG+CGG 0.555253 3_1:+19654851 None:intergenic
AATCTCCAAATAAATTGCAT+AGG 0.555389 3_1:+19655027 None:intergenic
GTGTTCAATCAATCAAAGAA+AGG 0.555579 3_1:-19644983 Msa0352000:CDS
GAAGCTATGAGAAGGTGACT+TGG 0.564885 3_1:-19643580 Msa0352000:CDS
AATGTTAGACGAGTTTCTAC+CGG 0.566162 3_1:+19643352 None:intergenic
AATGTTAGACGAGTTTCTAC+CGG 0.566162 3_1:+19654734 None:intergenic
AAGCAGATTCTTGGAGACTT+CGG 0.569927 3_1:-19644274 Msa0352000:CDS
ATCAATAGTACTGCTCGCCT+CGG 0.580823 3_1:+19655946 None:intergenic
AGATATGGCAAAACTCCTGA+TGG 0.585596 3_1:+19644476 None:intergenic
AGTTGTTATGTCAAGGCTTG+AGG 0.587807 3_1:-19644746 Msa0352000:CDS
CGTGTGTGCTCCCATTGTTA+CGG 0.593909 3_1:+19644180 None:intergenic
GATGCGTCGTGGAGCAGTGA+TGG 0.601043 3_1:-19644595 Msa0352000:CDS
GCTGAAACATTCCAACATGT+TGG 0.601281 3_1:+19643612 None:intergenic
GAGGAAAGTTTATCGAATTG+CGG 0.602785 3_1:-19643533 Msa0352000:CDS
AGTACTTTCTGTGTTTAGTG+AGG 0.603239 3_1:-19643552 Msa0352000:CDS
AATGAGAAAGTACTCATCCA+AGG 0.603868 3_1:+19644432 None:intergenic
AGATGGTGAACACCTCCACC+AGG 0.608901 3_1:+19643953 None:intergenic
AAAATGTGCTTAAATTGGAG+TGG 0.609715 3_1:-19644384 Msa0352000:CDS
TGAAACTTCGACTGATCTTG+CGG 0.612837 3_1:-19643858 Msa0352000:CDS
TGAAACTTCGACTGATCTTG+CGG 0.612837 3_1:-19655240 Msa0352000:CDS
AGTTTCTACCGGTATAACTT+CGG 0.613307 3_1:+19643363 None:intergenic
AGTTTCTACCGGTATAACTT+CGG 0.613307 3_1:+19654745 None:intergenic
TGTTTCTCCGAAATATCTCG+AGG 0.618316 3_1:-19655617 Msa0352000:CDS
AAAATGTGCTTAAAATGGAG+TGG 0.627109 3_1:-19655766 Msa0352000:CDS
GCACAAGTTGGATTCTAGAG+TGG 0.627118 3_1:+19643763 None:intergenic
GCACAAGTTGGATTCTAGAG+TGG 0.627118 3_1:+19655145 None:intergenic
TTATGCTAGAAGCTATGAGA+AGG 0.634466 3_1:-19643588 Msa0352000:CDS
TTATGCTAGAAGCTATGAGA+AGG 0.634466 3_1:-19654970 Msa0352000:intron
ATATGTCATGAATTACATCA+AGG 0.636314 3_1:-19643924 Msa0352000:CDS
ATATGTCATGAATTACATCA+AGG 0.636314 3_1:-19655306 Msa0352000:CDS
AATGACAAAGTACTCAGCCA+AGG 0.644750 3_1:+19655814 None:intergenic
TAGCACTGCTCGCTTCGGAT+CGG 0.659065 3_1:+19644569 None:intergenic
GCTGAAACATGCCAACATGT+CGG 0.661748 3_1:+19654994 None:intergenic
GCGTCGTGGAGCAGTGATGG+TGG 0.670396 3_1:-19644592 Msa0352000:CDS
TAGTGACGGTATCCAATCCG+AGG 0.672922 3_1:-19655963 Msa0352000:CDS
TATACAAAACACAGACAGGG+TGG 0.686135 3_1:-19643454 Msa0352000:CDS
GAGGTTTCGAGGAGTAGTGA+CGG 0.702293 3_1:-19655977 Msa0352000:CDS
TTGTGAAGAAGATCAAGACA+TGG 0.702934 3_1:-19645100 Msa0352000:CDS
TATACAAAACACAAACAGGG+TGG 0.717618 3_1:-19654836 Msa0352000:CDS
AAGTATACAAAACACAAACA+GGG 0.726191 3_1:-19654839 Msa0352000:CDS
AAGTATACAAAACACAGACA+GGG 0.732452 3_1:-19643457 Msa0352000:CDS
TGAGGATGAAAATATCAACG+AGG 0.787428 3_1:-19655996 Msa0352000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAATAAATAAATTTA+GGG + chr3_1:19646528-19646547 None:intergenic 0.0%
!! AATAATAAATAAATAAATTT+AGG + chr3_1:19646529-19646548 None:intergenic 0.0%
!!! TCATTTGATATTTATTTTTT+TGG + chr3_1:19645248-19645267 None:intergenic 10.0%
!! CATATATATATTATGTTTAA+TGG - chr3_1:19645670-19645689 Msa0352000:intron 10.0%
!!! TTAATTTAGGATTAAATTTA+TGG - chr3_1:19646322-19646341 Msa0352000:intron 10.0%
!!! TAAAGAGTTTTTTTTTTTTA+GGG + chr3_1:19646583-19646602 None:intergenic 10.0%
!!! ATAAAGAGTTTTTTTTTTTT+AGG + chr3_1:19646584-19646603 None:intergenic 10.0%
!!! TATTTTTTTAACTTGATTTT+GGG + chr3_1:19647205-19647224 None:intergenic 10.0%
!!! ATATTTTTTTAACTTGATTT+TGG + chr3_1:19647206-19647225 None:intergenic 10.0%
!! AATTAATATTATTGTTTGAA+AGG + chr3_1:19647869-19647888 None:intergenic 10.0%
!! TAAACAAAGTAAATTATATT+TGG + chr3_1:19647999-19648018 None:intergenic 10.0%
!! CATTCAAAAAATAAATATTA+TGG - chr3_1:19649020-19649039 Msa0352000:intron 10.0%
!!! TAAAATCTTTAAAATATTAG+GGG - chr3_1:19651069-19651088 Msa0352000:intron 10.0%
!!! ATTTTTTTTATCCTAATTAA+TGG + chr3_1:19651231-19651250 None:intergenic 10.0%
!!! TGTAATTCTTTATTTTTTTT+CGG + chr3_1:19653302-19653321 None:intergenic 10.0%
!!! AAGAATAAACAAATAAATTT+TGG - chr3_1:19653325-19653344 Msa0352000:intron 10.0%
!! AGTAATAATTAAGATATAAA+TGG + chr3_1:19654119-19654138 None:intergenic 10.0%
!!! TTCTTTTTTTATTCTTTAAA+AGG + chr3_1:19654310-19654329 None:intergenic 10.0%
!! AAAAAGAAACAAAAAAAAAA+AGG - chr3_1:19654322-19654341 Msa0352000:intron 10.0%
!! AAAAGAAACAAAAAAAAAAA+GGG - chr3_1:19654323-19654342 Msa0352000:intron 10.0%
!!! TATATTTTAGATCTTTTTCA+TGG - chr3_1:19644855-19644874 Msa0352000:CDS 15.0%
!! AAATCCATTAATTATATGAA+TGG - chr3_1:19645745-19645764 Msa0352000:intron 15.0%
!! AATCCATTAATTATATGAAT+GGG - chr3_1:19645746-19645765 Msa0352000:intron 15.0%
!!! ATATTTATTTTACTACTTCA+TGG - chr3_1:19646105-19646124 Msa0352000:intron 15.0%
!! AAATTTAGAAATGTTGTATT+GGG - chr3_1:19646386-19646405 Msa0352000:intron 15.0%
!! TCTTAAAAAAATCAATTTAG+TGG - chr3_1:19648223-19648242 Msa0352000:intron 15.0%
!!! TTGATCAATAGTATTTTAAA+GGG + chr3_1:19648752-19648771 None:intergenic 15.0%
!!! ATTGATCAATAGTATTTTAA+AGG + chr3_1:19648753-19648772 None:intergenic 15.0%
!! AAAAGAAAGAAATAATTGTA+CGG + chr3_1:19648874-19648893 None:intergenic 15.0%
!! CAAAAATAAGAAAAATTGTA+TGG + chr3_1:19648953-19648972 None:intergenic 15.0%
!!! TTTATTTTTTGAATGAAACA+AGG + chr3_1:19649015-19649034 None:intergenic 15.0%
!!! GGTATAATTTTTTTTTTTTG+AGG - chr3_1:19649483-19649502 Msa0352000:intron 15.0%
!! TATATTATAACTATATTTGG+AGG - chr3_1:19650454-19650473 Msa0352000:intron 15.0%
!!! AGGTATTTTCAAATAAAAAA+AGG + chr3_1:19650626-19650645 None:intergenic 15.0%
!!! AGATTTTATTAATTGTCAAA+GGG + chr3_1:19651057-19651076 None:intergenic 15.0%
!!! AAGATTTTATTAATTGTCAA+AGG + chr3_1:19651058-19651077 None:intergenic 15.0%
!! AATTAAAAAAAATGTGAGAA+TGG - chr3_1:19651135-19651154 Msa0352000:intron 15.0%
!! AAACATACATTAAAAAGTTA+GGG + chr3_1:19651725-19651744 None:intergenic 15.0%
!! AAAACATACATTAAAAAGTT+AGG + chr3_1:19651726-19651745 None:intergenic 15.0%
!! ATAAATAGTATCCTAAAAAT+CGG + chr3_1:19651825-19651844 None:intergenic 15.0%
!!! TTAATATTGTTGCATTTTAA+TGG + chr3_1:19653192-19653211 None:intergenic 15.0%
!! TTAAGGTTTAAAAGTTTAAA+TGG + chr3_1:19653818-19653837 None:intergenic 15.0%
!! AAAAACCTATGCAATTTATT+TGG - chr3_1:19644492-19644511 Msa0352000:CDS 20.0%
!!! TATGAGTTACTTTTTCATTT+AGG - chr3_1:19644922-19644941 Msa0352000:CDS 20.0%
!!! TGTATATATTTCTAGTCATT+AGG - chr3_1:19644966-19644985 Msa0352000:CDS 20.0%
!! TTTAAACACAAACATGAAAA+TGG - chr3_1:19645185-19645204 Msa0352000:intron 20.0%
!!! TGATATTTATTTTTTTGGAC+AGG + chr3_1:19645243-19645262 None:intergenic 20.0%
!! AATAAGTTTGTACTTATCTT+TGG + chr3_1:19645280-19645299 None:intergenic 20.0%
!!! AAAAAGTAAAATTTGATTCG+AGG + chr3_1:19645624-19645643 None:intergenic 20.0%
!! ATCCATTAATTATATGAATG+GGG - chr3_1:19645747-19645766 Msa0352000:intron 20.0%
!!! TATTTTGTCTTGTTCAAAAA+AGG - chr3_1:19645801-19645820 Msa0352000:intron 20.0%
!!! TTCTTATTGGTTAAAAACAA+TGG + chr3_1:19645996-19646015 None:intergenic 20.0%
!!! TTGTTTTTATCACTTCTTAT+TGG + chr3_1:19646009-19646028 None:intergenic 20.0%
!! AATAAGAAGTGATAAAAACA+AGG - chr3_1:19646008-19646027 Msa0352000:intron 20.0%
!!! AAGTTCTAAGCTTTTAATTT+AGG - chr3_1:19646309-19646328 Msa0352000:intron 20.0%
!! CAAATTTAGAAATGTTGTAT+TGG - chr3_1:19646385-19646404 Msa0352000:intron 20.0%
!! TCAAAATCATCATTAAAAGA+GGG + chr3_1:19646921-19646940 None:intergenic 20.0%
!! TTCAAAATCATCATTAAAAG+AGG + chr3_1:19646922-19646941 None:intergenic 20.0%
!!! TTTTGTATCTCTTTCTTTTT+AGG + chr3_1:19647045-19647064 None:intergenic 20.0%
!!! CTACTAACTAATTAAGTTTT+CGG - chr3_1:19647719-19647738 Msa0352000:intron 20.0%
!! ACAAAGTAAATTATATTTGG+TGG + chr3_1:19647996-19648015 None:intergenic 20.0%
!!! TTTTTGTTCTAAATTGTGTT+TGG + chr3_1:19648511-19648530 None:intergenic 20.0%
!! ACTATTGATCAATGAATTAA+AGG - chr3_1:19648760-19648779 Msa0352000:intron 20.0%
!! CTATTGATCAATGAATTAAA+GGG - chr3_1:19648761-19648780 Msa0352000:intron 20.0%
!! TATTGATCAATGAATTAAAG+GGG - chr3_1:19648762-19648781 Msa0352000:intron 20.0%
!!! TTTAATTTTTCTCTTGCTTT+TGG + chr3_1:19649396-19649415 None:intergenic 20.0%
!! TATTAATTGTTGCAAATACA+TGG + chr3_1:19650436-19650455 None:intergenic 20.0%
!! TATTATATAATGCGAACAAA+AGG + chr3_1:19650646-19650665 None:intergenic 20.0%
!! TTCGCATTATATAATATGAA+CGG - chr3_1:19650650-19650669 Msa0352000:intron 20.0%
!! TTATAATCTTAACTAACCAT+TGG - chr3_1:19651398-19651417 Msa0352000:intron 20.0%
!! TAAAAAATAAGTTGTATGGA+GGG + chr3_1:19651784-19651803 None:intergenic 20.0%
!! TGTGTAAAAAATAAGTTGTA+TGG + chr3_1:19651788-19651807 None:intergenic 20.0%
!! TAAATAGTATCCTAAAAATC+GGG + chr3_1:19651824-19651843 None:intergenic 20.0%
!!! TTTTTATGTGTTTGAATTGT+TGG - chr3_1:19651872-19651891 Msa0352000:intron 20.0%
!!! TTTTATGTGTTTGAATTGTT+GGG - chr3_1:19651873-19651892 Msa0352000:intron 20.0%
!! AAAAGTCATAAATGATGTAT+GGG + chr3_1:19652264-19652283 None:intergenic 20.0%
!!! TTTAAGTTATGTTATTTCTG+AGG + chr3_1:19652669-19652688 None:intergenic 20.0%
!!! TCAAAGACTTTTGTTTAAAT+TGG + chr3_1:19653158-19653177 None:intergenic 20.0%
!! CAAAAAATATTAATCTCTTG+AGG + chr3_1:19653258-19653277 None:intergenic 20.0%
!!! TTGAAACTTTTGAAACTTAA+AGG + chr3_1:19653423-19653442 None:intergenic 20.0%
!! GATCAATTATAAGACTAAAA+AGG + chr3_1:19653643-19653662 None:intergenic 20.0%
!!! ATTTCTAAGTTAGTTCTTTA+AGG + chr3_1:19653835-19653854 None:intergenic 20.0%
!! AGAAATTCTTTCAAACTAAA+AGG - chr3_1:19653849-19653868 Msa0352000:intron 20.0%
!!! CTTTTGACAATTTGAAATTT+GGG + chr3_1:19654095-19654114 None:intergenic 20.0%
!!! ACTTTTGACAATTTGAAATT+TGG + chr3_1:19654096-19654115 None:intergenic 20.0%
!!! TACTATTTCTTTGTCTTTTT+TGG - chr3_1:19654224-19654243 Msa0352000:intron 20.0%
!! TCTGAGTATTTAAAAATTGT+TGG - chr3_1:19654653-19654672 Msa0352000:intron 20.0%
!!! AAGTAAACAAAACAGTTTTT+CGG + chr3_1:19643989-19644008 None:intergenic 20.0%
!!! TGATCTACAATGTTATATTT+TGG - chr3_1:19644842-19644861 Msa0352000:CDS 20.0%
! ATACACAATATCAACTCTAT+TGG + chr3_1:19643488-19643507 None:intergenic 25.0%
!! AGTAAACAAAACAGTTTTTC+TGG + chr3_1:19643988-19644007 None:intergenic 25.0%
! TTGTTTACTTGATATGTATG+AGG - chr3_1:19643999-19644018 Msa0352000:CDS 25.0%
! ATATGTCATGAATTACATCA+AGG - chr3_1:19644218-19644237 Msa0352000:CDS 25.0%
! GATGAATAACATTCATTACA+TGG - chr3_1:19644449-19644468 Msa0352000:CDS 25.0%
! AATCTCCAAATAAATTGCAT+AGG + chr3_1:19644500-19644519 None:intergenic 25.0%
! AAGTATACAAAACACAAACA+GGG - chr3_1:19644685-19644704 Msa0352000:CDS 25.0%
!!! TTAGTTAACTTAGGAGTATT+AGG - chr3_1:19645010-19645029 Msa0352000:CDS 25.0%
!!! CATTTATTTGATGATGCTAA+TGG + chr3_1:19645053-19645072 None:intergenic 25.0%
! ACATGAAAATGGAAGAAATT+AGG - chr3_1:19645196-19645215 Msa0352000:intron 25.0%
!! GTTTCGTAAATGCTAATTTT+TGG - chr3_1:19645332-19645351 Msa0352000:intron 25.0%
! AACCCCATTCATATAATTAA+TGG + chr3_1:19645752-19645771 None:intergenic 25.0%
!!! AACCACTTTTTGACAATTTT+TGG - chr3_1:19645911-19645930 Msa0352000:intron 25.0%
! AAAATCACTCAAAAAAAGAG+GGG + chr3_1:19646748-19646767 None:intergenic 25.0%
! CAAAATCACTCAAAAAAAGA+GGG + chr3_1:19646749-19646768 None:intergenic 25.0%
! AAGTGCAATTAAACATTAGA+AGG + chr3_1:19646808-19646827 None:intergenic 25.0%
! CAAAATCATCATTAAAAGAG+GGG + chr3_1:19646920-19646939 None:intergenic 25.0%
!! GATTTTGAACAAAACACAAT+TGG - chr3_1:19646933-19646952 Msa0352000:intron 25.0%
! AAAATCGCTCAAATAAAATG+AGG - chr3_1:19646971-19646990 Msa0352000:intron 25.0%
! AAATCGCTCAAATAAAATGA+GGG - chr3_1:19646972-19646991 Msa0352000:intron 25.0%
!! TATATTAGAGTTGATCTTCT+AGG + chr3_1:19647129-19647148 None:intergenic 25.0%
!! GAACAATTAGGGTTTAATTT+CGG - chr3_1:19647246-19647265 Msa0352000:intron 25.0%
!!! CTATTGTGTTTTTTATTCTC+TGG + chr3_1:19647426-19647445 None:intergenic 25.0%
! CAGAGAATAAAAAACACAAT+AGG - chr3_1:19647424-19647443 Msa0352000:intron 25.0%
! TTTCAAAAATCTGAAAGGTA+CGG + chr3_1:19647529-19647548 None:intergenic 25.0%
!! TTTGGTTTCAAAAATCTGAA+AGG + chr3_1:19647534-19647553 None:intergenic 25.0%
! AAACTTAATTAGTTAGTAGG+TGG + chr3_1:19647718-19647737 None:intergenic 25.0%
! CGAAAACTTAATTAGTTAGT+AGG + chr3_1:19647721-19647740 None:intergenic 25.0%
!! ATGTTATTGCTTTGTGTTTT+TGG + chr3_1:19647815-19647834 None:intergenic 25.0%
!! TCAATTTTGTGTTAACATTC+CGG - chr3_1:19647900-19647919 Msa0352000:intron 25.0%
! TAACTCATCCAAATTAACAT+CGG + chr3_1:19648195-19648214 None:intergenic 25.0%
!!! TGTCTTCTTGTTTTTTTATG+TGG + chr3_1:19648431-19648450 None:intergenic 25.0%
! GGAACAAAAATTTATAGTCT+TGG - chr3_1:19648813-19648832 Msa0352000:intron 25.0%
! CAATTTCGAATTAGTCAAAA+AGG - chr3_1:19649586-19649605 Msa0352000:intron 25.0%
! ACTTCATTATCATGATAGAT+TGG - chr3_1:19649716-19649735 Msa0352000:intron 25.0%
! ATGCAGTGAATATCATTTAA+AGG - chr3_1:19649898-19649917 Msa0352000:intron 25.0%
! TGCAGTGAATATCATTTAAA+GGG - chr3_1:19649899-19649918 Msa0352000:intron 25.0%
! AGATGATCACTTATAATGTT+AGG - chr3_1:19650275-19650294 Msa0352000:intron 25.0%
! TGATTCATTAAATGTTGAGT+GGG + chr3_1:19650560-19650579 None:intergenic 25.0%
! TTGATTCATTAAATGTTGAG+TGG + chr3_1:19650561-19650580 None:intergenic 25.0%
! ATCATAAATGTAGCATTATG+TGG + chr3_1:19650892-19650911 None:intergenic 25.0%
! TAATGCTACATTTATGATAC+AGG - chr3_1:19650894-19650913 Msa0352000:intron 25.0%
! AATGGAATGAAAATTTGTGA+AGG - chr3_1:19651153-19651172 Msa0352000:intron 25.0%
! AATGAAAATTTGTGAAGGAT+TGG - chr3_1:19651158-19651177 Msa0352000:intron 25.0%
! TGTTAAAACTCATACTTTGT+AGG - chr3_1:19651424-19651443 Msa0352000:intron 25.0%
! GTTAAAACTCATACTTTGTA+GGG - chr3_1:19651425-19651444 Msa0352000:intron 25.0%
! AAAAAGATCACATACTTGAA+TGG + chr3_1:19651481-19651500 None:intergenic 25.0%
! GTAAAAAATAAGTTGTATGG+AGG + chr3_1:19651785-19651804 None:intergenic 25.0%
!! TTGGGATAATTGGATTTTAT+CGG - chr3_1:19651891-19651910 Msa0352000:intron 25.0%
! GATATTTACGATGTAAGAAT+AGG - chr3_1:19651948-19651967 Msa0352000:intron 25.0%
! GGCTTATTTATATGCTATTA+TGG + chr3_1:19651991-19652010 None:intergenic 25.0%
! GTAAGAATATGACTTAATGA+TGG + chr3_1:19652066-19652085 None:intergenic 25.0%
! ATGAAAATCAAGACAACTAA+TGG + chr3_1:19652114-19652133 None:intergenic 25.0%
!! ATTAGTTGTCTTGATTTTCA+TGG - chr3_1:19652113-19652132 Msa0352000:intron 25.0%
! GAAAAGTCATAAATGATGTA+TGG + chr3_1:19652265-19652284 None:intergenic 25.0%
!!! AGAGTTAGTTTTGTTTAAAG+TGG + chr3_1:19652558-19652577 None:intergenic 25.0%
!!! TATTTTGATTGCTAATGAGT+TGG + chr3_1:19652606-19652625 None:intergenic 25.0%
!!! TGGATTCTTTAAGGATTTTT+GGG + chr3_1:19652841-19652860 None:intergenic 25.0%
!!! TTGGATTCTTTAAGGATTTT+TGG + chr3_1:19652842-19652861 None:intergenic 25.0%
!! AATATTAGTTCTCCATGAAA+AGG + chr3_1:19653026-19653045 None:intergenic 25.0%
!! ATGGAGAACTAATATTTTTC+TGG - chr3_1:19653030-19653049 Msa0352000:intron 25.0%
!! TGGAGAACTAATATTTTTCT+GGG - chr3_1:19653031-19653050 Msa0352000:intron 25.0%
!!! ATTGTTGCATTTTAATGGTT+GGG + chr3_1:19653187-19653206 None:intergenic 25.0%
!!! TATTGTTGCATTTTAATGGT+TGG + chr3_1:19653188-19653207 None:intergenic 25.0%
!! TTGGTAGCTTAGTTTAATTT+CGG - chr3_1:19653344-19653363 Msa0352000:intron 25.0%
! GAAACTTAAAGGAGTAATTT+AGG + chr3_1:19653412-19653431 None:intergenic 25.0%
! AACAAAGGAAAGAGAAAAAT+AGG + chr3_1:19653893-19653912 None:intergenic 25.0%
! TTCCTAATTTCGTTAAATAC+TGG - chr3_1:19653976-19653995 Msa0352000:intron 25.0%
! AACCAGTATTTAACGAAATT+AGG + chr3_1:19653981-19654000 None:intergenic 25.0%
! TACTAAAGAAATTGAGAAAG+TGG + chr3_1:19654158-19654177 None:intergenic 25.0%
!!! AAAAAGGGTTTTTTGTGATT+TGG - chr3_1:19654338-19654357 Msa0352000:intron 25.0%
! TTTGATTGATTGAACACAAT+TGG + chr3_1:19654538-19654557 None:intergenic 25.0%
! GAATCAAAAGACATATAATC+AGG + chr3_1:19654848-19654867 None:intergenic 25.0%
! ATACACAATATCAACTCTAT+TGG + chr3_1:19643488-19643507 None:intergenic 25.0%
!! CAAGATAAAGAAATGGATTT+GGG - chr3_1:19655177-19655196 Msa0352000:CDS 25.0%
!! TTTGTTTCTCCAAAATATCT+CGG - chr3_1:19655287-19655306 Msa0352000:CDS 25.0%
!! AGTAAACAAAACAGTTTTTC+GGG + chr3_1:19643988-19644007 None:intergenic 25.0%
! ATATGTCATGAATTACATCA+AGG - chr3_1:19644218-19644237 Msa0352000:CDS 25.0%
! GATGAATAACATTCATTACA+TGG - chr3_1:19644449-19644468 Msa0352000:CDS 25.0%
! AAAACCCTATGTAATTTCTT+TGG - chr3_1:19655874-19655893 Msa0352000:intron 25.0%
! ATCTCCAAAGAAATTACATA+GGG + chr3_1:19655881-19655900 None:intergenic 25.0%
! AATCTCCAAAGAAATTACAT+AGG + chr3_1:19655882-19655901 None:intergenic 25.0%
!!! AAAGATTTTAGTACTGCTTT+TGG - chr3_1:19656042-19656061 Msa0352000:CDS 25.0%
! CAAACTTTTGTTGCAAAGTT+TGG + chr3_1:19643315-19643334 None:intergenic 30.0%
CAAAAGTTTGATTCTGTGAA+TGG - chr3_1:19643325-19643344 Msa0352000:CDS 30.0%
! GAATGGAAATTTGAAGCATA+AGG - chr3_1:19643342-19643361 Msa0352000:CDS 30.0%
! TTTTGCAAGTTGTTATGTCA+AGG - chr3_1:19643389-19643408 Msa0352000:CDS 30.0%
GAATTGAAAGACATGTAATC+AGG + chr3_1:19643466-19643485 None:intergenic 30.0%
!! AGAGTTGATATTGTGTATGA+TGG - chr3_1:19643490-19643509 Msa0352000:CDS 30.0%
!! ATTGTGTATGATGGATCATT+TGG - chr3_1:19643499-19643518 Msa0352000:CDS 30.0%
TTGAGATCTTCAAGTATAGA+AGG + chr3_1:19643613-19643632 None:intergenic 30.0%
CATCGAAAATGTGCTTAAAA+TGG - chr3_1:19643753-19643772 Msa0352000:CDS 30.0%
AAAATGTGCTTAAAATGGAG+TGG - chr3_1:19643758-19643777 Msa0352000:CDS 30.0%
GGAGAAACAAAACTGATAAA+CGG + chr3_1:19643896-19643915 None:intergenic 30.0%
! GTTTTGCGCCTTTTAAATTT+TGG - chr3_1:19643934-19643953 Msa0352000:CDS 30.0%
! ACTTGATATGTATGAGGTTT+TGG - chr3_1:19644005-19644024 Msa0352000:CDS 30.0%
CCAGGAAAACATTTATTTGA+TGG + chr3_1:19644174-19644193 None:intergenic 30.0%
! CCATCAAATAAATGTTTTCC+TGG - chr3_1:19644171-19644190 Msa0352000:CDS 30.0%
! TCAAATAAATGTTTTCCTGG+TGG - chr3_1:19644174-19644193 Msa0352000:CDS 30.0%
TCATGACATATCTTGTAAGA+TGG + chr3_1:19644209-19644228 None:intergenic 30.0%
CATCGACAATTAGAAGATTA+AGG + chr3_1:19644266-19644285 None:intergenic 30.0%
CATTCATTACATGGTTCAAA+AGG - chr3_1:19644458-19644477 Msa0352000:CDS 30.0%
GCAATTTATTTGGAGATTTC+TGG - chr3_1:19644502-19644521 Msa0352000:CDS 30.0%
!! AAAGATTTTAGTACCGCTTT+TGG - chr3_1:19644660-19644679 Msa0352000:CDS 30.0%
TTTGTATACTTCACCAAAAG+CGG + chr3_1:19644676-19644695 None:intergenic 30.0%
GAAGTATACAAAACACAAAC+AGG - chr3_1:19644684-19644703 Msa0352000:CDS 30.0%
AGTCATTAGGAAATAACACT+AGG - chr3_1:19644979-19644998 Msa0352000:CDS 30.0%
GATCTTGGTTTAGTTAACTT+AGG - chr3_1:19645001-19645020 Msa0352000:CDS 30.0%
AAATGTACCTGTTGAAACTT+TGG - chr3_1:19645068-19645087 Msa0352000:CDS 30.0%
! CTTTTATCCAAAGTTTCAAC+AGG + chr3_1:19645078-19645097 None:intergenic 30.0%
GTTGAAACTTTGGATAAAAG+TGG - chr3_1:19645078-19645097 Msa0352000:CDS 30.0%
!!! CGTAAATGCTAATTTTTGGT+TGG - chr3_1:19645336-19645355 Msa0352000:intron 30.0%
! AAGTAAAATTTGATTCGAGG+TGG + chr3_1:19645621-19645640 None:intergenic 30.0%
!!! GGATTTTGTTTTGTTTTGAG+AGG + chr3_1:19645731-19645750 None:intergenic 30.0%
!!! ATTTTGACTAGTTGGAAATG+AGG + chr3_1:19645776-19645795 None:intergenic 30.0%
CATTTCCAACTAGTCAAAAT+AGG - chr3_1:19645776-19645795 Msa0352000:intron 30.0%
!!! ATACACCTATTTTGACTAGT+TGG + chr3_1:19645784-19645803 None:intergenic 30.0%
GTCCAAAAATTGTCAAAAAG+TGG + chr3_1:19645916-19645935 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr3_1:19645983-19646002 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr3_1:19646034-19646053 Msa0352000:intron 30.0%
AATGTGATCAACTAGTTCAT+TGG - chr3_1:19646155-19646174 Msa0352000:intron 30.0%
! TTTCTTTTCCATCAAAAGCA+TGG - chr3_1:19646209-19646228 Msa0352000:intron 30.0%
! ATTAAAGTCCATGCTTTTGA+TGG + chr3_1:19646220-19646239 None:intergenic 30.0%
! CAAAAGCATGGACTTTAATA+TGG - chr3_1:19646221-19646240 Msa0352000:intron 30.0%
! ACATCTTCTTTTGACAACAT+TGG - chr3_1:19646248-19646267 Msa0352000:intron 30.0%
CTAGTTAAGGGAACTAAAAA+TGG + chr3_1:19646479-19646498 None:intergenic 30.0%
TGCACAATTAGCAAAAGATA+GGG + chr3_1:19646716-19646735 None:intergenic 30.0%
TTGCACAATTAGCAAAAGAT+AGG + chr3_1:19646717-19646736 None:intergenic 30.0%
AAATCACTCAAAAAAAGAGG+GGG + chr3_1:19646747-19646766 None:intergenic 30.0%
GCAAAATCACTCAAAAAAAG+AGG + chr3_1:19646750-19646769 None:intergenic 30.0%
AATCGCTCAAATAAAATGAG+GGG - chr3_1:19646973-19646992 Msa0352000:intron 30.0%
ATTGCACAATAGCAAAAGAT+AGG - chr3_1:19647003-19647022 Msa0352000:intron 30.0%
TTGCACAATAGCAAAAGATA+GGG - chr3_1:19647004-19647023 Msa0352000:intron 30.0%
AAGAAAGAGATACAAAACTG+AGG - chr3_1:19647048-19647067 Msa0352000:intron 30.0%
ATTCAGATGCATTTCAAACA+GGG - chr3_1:19647084-19647103 Msa0352000:intron 30.0%
AACATCTACGAAGAACAATT+AGG - chr3_1:19647234-19647253 Msa0352000:intron 30.0%
ACATCTACGAAGAACAATTA+GGG - chr3_1:19647235-19647254 Msa0352000:intron 30.0%
!!! TCATGCTTTAAAGAGCTTTT+AGG + chr3_1:19647340-19647359 None:intergenic 30.0%
!!! CTTTGTGTTTTTGGTTTTGT+CGG + chr3_1:19647806-19647825 None:intergenic 30.0%
GAATCGAATCTAATACCTTA+AGG + chr3_1:19648169-19648188 None:intergenic 30.0%
!!! GTGTTCACTTGTTTTTTATG+TGG + chr3_1:19648553-19648572 None:intergenic 30.0%
AGACATTACATCACACAATA+AGG + chr3_1:19648710-19648729 None:intergenic 30.0%
TATTGTGTGATGTAATGTCT+AGG - chr3_1:19648710-19648729 Msa0352000:intron 30.0%
ATTGTGTGATGTAATGTCTA+GGG - chr3_1:19648711-19648730 Msa0352000:intron 30.0%
!! ATGTGCTCTTAAGTCATTTT+CGG - chr3_1:19648792-19648811 Msa0352000:intron 30.0%
TCTATTAGTTATGTGCTCTT+AGG - chr3_1:19648836-19648855 Msa0352000:intron 30.0%
CACTTAAAAGTCTATTACGA+TGG + chr3_1:19648987-19649006 None:intergenic 30.0%
TATATTTATTACTCCCAAGC+AGG - chr3_1:19649179-19649198 Msa0352000:intron 30.0%
ATATTTATTACTCCCAAGCA+GGG - chr3_1:19649180-19649199 Msa0352000:intron 30.0%
AAATAACTACCGTATACATG+AGG - chr3_1:19649355-19649374 Msa0352000:intron 30.0%
TATACTATCCTGCAATAAAG+GGG + chr3_1:19649457-19649476 None:intergenic 30.0%
GTATACTATCCTGCAATAAA+GGG + chr3_1:19649458-19649477 None:intergenic 30.0%
AGTATACTATCCTGCAATAA+AGG + chr3_1:19649459-19649478 None:intergenic 30.0%
AAATTGATGAAGCTGAACTT+GGG + chr3_1:19649572-19649591 None:intergenic 30.0%
GCAGTGAATATCATTTAAAG+GGG - chr3_1:19649900-19649919 Msa0352000:intron 30.0%
CTATAGAAGAGAGACTAATA+TGG - chr3_1:19650234-19650253 Msa0352000:intron 30.0%
CATATCTGATTGTGACTATT+TGG - chr3_1:19650315-19650334 Msa0352000:intron 30.0%
TCAAAAACAACAGTTACATC+AGG - chr3_1:19650394-19650413 Msa0352000:intron 30.0%
CTGTAAATCTGAGCAAAATA+AGG + chr3_1:19650700-19650719 None:intergenic 30.0%
ACATTTATGATACAGGAAGA+TGG - chr3_1:19650901-19650920 Msa0352000:intron 30.0%
TTATTAATTGTCAAAGGGCA+AGG + chr3_1:19651052-19651071 None:intergenic 30.0%
!!! GGTTAGCTTTTCATACAAAA+AGG + chr3_1:19651098-19651117 None:intergenic 30.0%
! AAAATTTGTGAAGGATTGGT+GGG - chr3_1:19651162-19651181 Msa0352000:intron 30.0%
AGTGTAACTGTCCATTAATT+AGG - chr3_1:19651217-19651236 Msa0352000:intron 30.0%
!!! CTCGTTGTACACATTTTTTT+GGG + chr3_1:19651294-19651313 None:intergenic 30.0%
!!! ACTCGTTGTACACATTTTTT+TGG + chr3_1:19651295-19651314 None:intergenic 30.0%
TTATGAAATCTGAATCACCA+CGG + chr3_1:19651349-19651368 None:intergenic 30.0%
!! ATGAGTTTTAACAAAGCCAA+TGG + chr3_1:19651417-19651436 None:intergenic 30.0%
GTTTGAATTGTTGGGATAAT+TGG - chr3_1:19651881-19651900 Msa0352000:intron 30.0%
AAAATCAAGACAACTAATGG+TGG + chr3_1:19652111-19652130 None:intergenic 30.0%
ATCTACAATATCCAAGTATC+TGG - chr3_1:19652152-19652171 Msa0352000:intron 30.0%
! TTATTTAGACTCAGGTTGTT+TGG + chr3_1:19652449-19652468 None:intergenic 30.0%
AAATACCATCAAGAATCTGA+CGG - chr3_1:19652621-19652640 Msa0352000:intron 30.0%
GTATACGCATTAAATCCTTT+AGG - chr3_1:19652730-19652749 Msa0352000:intron 30.0%
! CATTAAATCCTTTAGGAATC+AGG - chr3_1:19652737-19652756 Msa0352000:intron 30.0%
TAATAGTACCTGATTCCTAA+AGG + chr3_1:19652748-19652767 None:intergenic 30.0%
TTTCATGAATTCTATGTGCA+TGG + chr3_1:19652789-19652808 None:intergenic 30.0%
!! ATTCTTTAAGGATTTTTGGG+AGG + chr3_1:19652838-19652857 None:intergenic 30.0%
AGTCAATCTTGGATTCTTTA+AGG + chr3_1:19652850-19652869 None:intergenic 30.0%
TTAACTTCCTCTTCAGAAAA+AGG - chr3_1:19652918-19652937 Msa0352000:intron 30.0%
TTCATATGGCTATTGTTCAT+TGG + chr3_1:19653084-19653103 None:intergenic 30.0%
AAATGTAGGTCTCTTTCATA+TGG + chr3_1:19653098-19653117 None:intergenic 30.0%
CAAATGCTCTTGTTAAATGT+AGG + chr3_1:19653112-19653131 None:intergenic 30.0%
!! CTACATTTAACAAGAGCATT+TGG - chr3_1:19653110-19653129 Msa0352000:intron 30.0%
! TAGCTTAGTTTAATTTCGGT+AGG - chr3_1:19653348-19653367 Msa0352000:intron 30.0%
AAAGGACCAAAAATGGTATT+TGG + chr3_1:19653374-19653393 None:intergenic 30.0%
CAAACTAAAAGGACCAAAAA+TGG + chr3_1:19653381-19653400 None:intergenic 30.0%
AGGAATTCTGTCAAACTAAA+AGG + chr3_1:19653392-19653411 None:intergenic 30.0%
ATCAATTAACAGCTACAACA+GGG + chr3_1:19653483-19653502 None:intergenic 30.0%
GATTCAAGTCAACAACTTAA+CGG + chr3_1:19653516-19653535 None:intergenic 30.0%
TGTCAAAACGCTATGTTTAA+TGG - chr3_1:19653564-19653583 Msa0352000:intron 30.0%
AACAAAACAACGCATTAACA+AGG + chr3_1:19653705-19653724 None:intergenic 30.0%
CATAAGTCAATACTCAATAC+AGG + chr3_1:19653939-19653958 None:intergenic 30.0%
ATCAAAGTGAAGTTTCTTGT+GGG + chr3_1:19654062-19654081 None:intergenic 30.0%
AATCAAAGTGAAGTTTCTTG+TGG + chr3_1:19654063-19654082 None:intergenic 30.0%
! TTGAGAAAGTGGAGTTTTTA+TGG + chr3_1:19654147-19654166 None:intergenic 30.0%
ATCTTTGTCTCAAGTTTCTT+TGG - chr3_1:19654193-19654212 Msa0352000:intron 30.0%
AATTGTTCTTCTTGCTTGTT+AGG - chr3_1:19654361-19654380 Msa0352000:intron 30.0%
! TTGTTAGGTTTTTGTTGGTA+TGG - chr3_1:19654376-19654395 Msa0352000:intron 30.0%
GTGTTCAATCAATCAAAGAA+AGG - chr3_1:19654541-19654560 Msa0352000:intron 30.0%
GCTTAAATGTGTTGAAGATA+AGG - chr3_1:19654592-19654611 Msa0352000:intron 30.0%
TGAAGATAAGGTAATGAGTT+TGG - chr3_1:19654604-19654623 Msa0352000:intron 30.0%
ATGAGTTTGGAGACAAATAT+TGG - chr3_1:19654617-19654636 Msa0352000:intron 30.0%
! TTGTTGCAAAGTTTGAGTTA+GGG + chr3_1:19654690-19654709 None:intergenic 30.0%
! TTTGTTGCAAAGTTTGAGTT+AGG + chr3_1:19654691-19654710 None:intergenic 30.0%
CAAAAGTTTGATTCTGTGAA+TGG - chr3_1:19643325-19643344 Msa0352000:CDS 30.0%
! GAATGGAAATTTGAAGCATA+AGG - chr3_1:19643342-19643361 Msa0352000:CDS 30.0%
! TTTTGCAAGTTGTTATGTCA+AGG - chr3_1:19643389-19643408 Msa0352000:CDS 30.0%
!! AGAGTTGATATTGTGTATGA+TGG - chr3_1:19643490-19643509 Msa0352000:CDS 30.0%
!! ATTGTGTATGATGGATCATT+TGG - chr3_1:19643499-19643518 Msa0352000:CDS 30.0%
GTTTGTTTCAAATTACCATC+AGG - chr3_1:19655033-19655052 Msa0352000:CDS 30.0%
CATCGAAAATGTGCTTAAAT+TGG - chr3_1:19655135-19655154 Msa0352000:CDS 30.0%
AAAATGTGCTTAAATTGGAG+TGG - chr3_1:19655140-19655159 Msa0352000:CDS 30.0%
TGAATCGCAAGATAAAGAAA+TGG - chr3_1:19655170-19655189 Msa0352000:CDS 30.0%
! GCAAGATAAAGAAATGGATT+TGG - chr3_1:19655176-19655195 Msa0352000:CDS 30.0%
! GTATTGCGCCTTTTAAATTT+TGG - chr3_1:19655316-19655335 Msa0352000:CDS 30.0%
TTGTTTACTTGACATGTATG+AGG - chr3_1:19655381-19655400 Msa0352000:CDS 30.0%
!! GAAGTTGATTCTTTTGTTAG+AGG - chr3_1:19655448-19655467 Msa0352000:CDS 30.0%
CCAGGAAAACATTTATTTGA+TGG + chr3_1:19644174-19644193 None:intergenic 30.0%
! CCATCAAATAAATGTTTTCC+TGG - chr3_1:19644171-19644190 Msa0352000:CDS 30.0%
! TCAAATAAATGTTTTCCTGG+TGG - chr3_1:19644174-19644193 Msa0352000:CDS 30.0%
TCATGACATATCTTGTAAGA+TGG + chr3_1:19644209-19644228 None:intergenic 30.0%
CATCGACAATTAGAAGATTA+AGG + chr3_1:19644266-19644285 None:intergenic 30.0%
CATTCATTACATGGTTCAAA+AGG - chr3_1:19644458-19644477 Msa0352000:CDS 30.0%
! GTAATTTCTTTGGAGATTTC+TGG - chr3_1:19655884-19655903 Msa0352000:intron 30.0%
AAGTATACAAAACACAGACA+GGG - chr3_1:19656067-19656086 Msa0352000:CDS 30.0%
!! TGAGAAGTGGATTAAGTATA+CGG - chr3_1:19656197-19656216 Msa0352000:CDS 30.0%
AGTTGTTATGTCAAGGCTTA+AGG - chr3_1:19643396-19643415 Msa0352000:CDS 35.0%
! TGGATCATTTGGTTCAATTG+AGG - chr3_1:19643510-19643529 Msa0352000:CDS 35.0%
TGAGGATGAAAATATCAACG+AGG - chr3_1:19643528-19643547 Msa0352000:CDS 35.0%
AAAATATCAACGAGGTTTCG+AGG - chr3_1:19643536-19643555 Msa0352000:CDS 35.0%
GTTTGCTTCAAATTACCATC+AGG - chr3_1:19643651-19643670 Msa0352000:CDS 35.0%
TCCTTGAAGCAATGAAGATA+TGG + chr3_1:19643684-19643703 None:intergenic 35.0%
CCCAAATCCATTTCTTTATC+CGG + chr3_1:19643798-19643817 None:intergenic 35.0%
! CCGGATAAAGAAATGGATTT+GGG - chr3_1:19643795-19643814 Msa0352000:CDS 35.0%
CAATTGTGTAAGCAGATTCT+CGG - chr3_1:19643859-19643878 Msa0352000:CDS 35.0%
AACTGAACCTCGAGATATTT+CGG + chr3_1:19643917-19643936 None:intergenic 35.0%
TGGCCTCACCAAAATTTAAA+AGG + chr3_1:19643945-19643964 None:intergenic 35.0%
!! GAAGTTGATTCTTTTGTCAG+AGG - chr3_1:19644066-19644085 Msa0352000:CDS 35.0%
! CACAAACTTCTAAGAAGCTT+TGG - chr3_1:19644096-19644115 Msa0352000:CDS 35.0%
! AATAAATGTTTTCCTGGTGG+AGG - chr3_1:19644177-19644196 Msa0352000:CDS 35.0%
! ATCAAGGCACTTGTTGAATA+TGG - chr3_1:19644234-19644253 Msa0352000:CDS 35.0%
GTTCAATTGCTTGCAACTTA+AGG - chr3_1:19644346-19644365 Msa0352000:CDS 35.0%
AGCAACATCAGTGTATAACT+TGG + chr3_1:19644412-19644431 None:intergenic 35.0%
TTATGCTAGAAGCTATGAGA+AGG - chr3_1:19644554-19644573 Msa0352000:CDS 35.0%
TGTACTTTCTGTGTTTAGTG+AGG - chr3_1:19644590-19644609 Msa0352000:CDS 35.0%
GAGGAAAGTTTATCGAATTG+TGG - chr3_1:19644609-19644628 Msa0352000:CDS 35.0%
TATACAAAACACAAACAGGG+TGG - chr3_1:19644688-19644707 Msa0352000:CDS 35.0%
TCGCGAAGATCTACAAATAT+CGG - chr3_1:19644731-19644750 Msa0352000:CDS 35.0%
AGTTTCTACCGGTATAACTT+CGG + chr3_1:19644782-19644801 None:intergenic 35.0%
AATGTTAGACGAGTTTCTAC+CGG + chr3_1:19644793-19644812 None:intergenic 35.0%
TGAGAAGTGGATCAAGTATA+CGG - chr3_1:19644815-19644834 Msa0352000:CDS 35.0%
AGGAAATAACACTAGGATCT+TGG - chr3_1:19644986-19645005 Msa0352000:CDS 35.0%
GGAACTACCAATATTAGATG+AGG - chr3_1:19645217-19645236 Msa0352000:intron 35.0%
TAAAGTCTCATCATGTACGA+AGG - chr3_1:19645310-19645329 Msa0352000:intron 35.0%
! TTGTTGACTGTTATAAGCCA+GGG + chr3_1:19646183-19646202 None:intergenic 35.0%
! TTTGTTGACTGTTATAAGCC+AGG + chr3_1:19646184-19646203 None:intergenic 35.0%
CACAATTAGCAAAAGATAGG+GGG + chr3_1:19646714-19646733 None:intergenic 35.0%
GCACAATTAGCAAAAGATAG+GGG + chr3_1:19646715-19646734 None:intergenic 35.0%
ACAATTGGCAAAAAGATAGG+GGG + chr3_1:19646834-19646853 None:intergenic 35.0%
CACAATTGGCAAAAAGATAG+GGG + chr3_1:19646835-19646854 None:intergenic 35.0%
GCACAATTGGCAAAAAGATA+GGG + chr3_1:19646836-19646855 None:intergenic 35.0%
TCGCTCAAAAAAGAAGAAGA+GGG + chr3_1:19646870-19646889 None:intergenic 35.0%
ATCGCTCAAAAAAGAAGAAG+AGG + chr3_1:19646871-19646890 None:intergenic 35.0%
TCATTAAAAGAGGGGAAATG+AGG + chr3_1:19646912-19646931 None:intergenic 35.0%
AACACAATTGGCAAAAGATG+TGG - chr3_1:19646945-19646964 Msa0352000:intron 35.0%
ATCGCTCAAATAAAATGAGG+GGG - chr3_1:19646974-19646993 Msa0352000:intron 35.0%
TGCACAATAGCAAAAGATAG+GGG - chr3_1:19647005-19647024 Msa0352000:intron 35.0%
GATTCAGATGCATTTCAAAC+AGG - chr3_1:19647083-19647102 Msa0352000:intron 35.0%
! TAGGGTTTAATTTCGGTGAA+TGG - chr3_1:19647253-19647272 Msa0352000:intron 35.0%
!! CTTGGATTTTGATACTGTGT+TGG + chr3_1:19647287-19647306 None:intergenic 35.0%
AACCAAACCACATCAAAAAG+AGG - chr3_1:19647547-19647566 Msa0352000:intron 35.0%
! ATATGGTGGTTGGAAACTTT+TGG + chr3_1:19647573-19647592 None:intergenic 35.0%
GATGTTCACGATAAGAGATA+TGG + chr3_1:19647590-19647609 None:intergenic 35.0%
TATCTCTTATCGTGAACATC+AGG - chr3_1:19647590-19647609 Msa0352000:intron 35.0%
! CTGGTGATTTGTGTTTGTTT+GGG + chr3_1:19647683-19647702 None:intergenic 35.0%
! TGTTAACATTCCGGTTTTCA+GGG - chr3_1:19647909-19647928 Msa0352000:intron 35.0%
TCGAATCTAATACCTTAAGG+AGG + chr3_1:19648166-19648185 None:intergenic 35.0%
GATTCTCTCCGATGTTAATT+TGG - chr3_1:19648184-19648203 Msa0352000:intron 35.0%
AGTGAACACAACTGCATAAA+AGG - chr3_1:19648564-19648583 Msa0352000:intron 35.0%
GTGAACACAACTGCATAAAA+GGG - chr3_1:19648565-19648584 Msa0352000:intron 35.0%
! TTGGGGATAATTAAGGGTAT+TGG - chr3_1:19648597-19648616 Msa0352000:intron 35.0%
!! TGGGGATAATTAAGGGTATT+GGG - chr3_1:19648598-19648617 Msa0352000:intron 35.0%
!! GATAATTAAGGGTATTGGGA+TGG - chr3_1:19648602-19648621 Msa0352000:intron 35.0%
!! CGGTAGTTATTTTCACCTAT+GGG + chr3_1:19649347-19649366 None:intergenic 35.0%
!! ACGGTAGTTATTTTCACCTA+TGG + chr3_1:19649348-19649367 None:intergenic 35.0%
!!! TTTCTCTTGCTTTTGGTGTT+AGG + chr3_1:19649389-19649408 None:intergenic 35.0%
!! GACTTTTGATTGTTTTGTGC+AGG + chr3_1:19649419-19649438 None:intergenic 35.0%
ATACTATCCTGCAATAAAGG+GGG + chr3_1:19649456-19649475 None:intergenic 35.0%
ATTGCAGGATAGTATACTAC+TGG - chr3_1:19649461-19649480 Msa0352000:intron 35.0%
TTGCAGGATAGTATACTACT+GGG - chr3_1:19649462-19649481 Msa0352000:intron 35.0%
GAAATTGATGAAGCTGAACT+TGG + chr3_1:19649573-19649592 None:intergenic 35.0%
ATGTGTGATCATTGTCTCAT+TGG - chr3_1:19649739-19649758 Msa0352000:intron 35.0%
!! TCCGATAATGGAGATTAATG+TGG - chr3_1:19650080-19650099 Msa0352000:intron 35.0%
CCCACATTAATCTCCATTAT+CGG + chr3_1:19650084-19650103 None:intergenic 35.0%
!! CCGATAATGGAGATTAATGT+GGG - chr3_1:19650081-19650100 Msa0352000:intron 35.0%
! ATTGTTGGCTGATATCGAAT+GGG - chr3_1:19650116-19650135 Msa0352000:intron 35.0%
!!! ACTGTTGTTTTTGATGACGA+GGG + chr3_1:19650388-19650407 None:intergenic 35.0%
!!! AACTGTTGTTTTTGATGACG+AGG + chr3_1:19650389-19650408 None:intergenic 35.0%
!!! CAGTTTTTGGCTCTCAAATT+AGG + chr3_1:19650480-19650499 None:intergenic 35.0%
TCAGATTTACAGAACATCAC+AGG - chr3_1:19650708-19650727 Msa0352000:intron 35.0%
TTATGATACAGGAAGATGGA+TGG - chr3_1:19650905-19650924 Msa0352000:intron 35.0%
TATGATACAGGAAGATGGAT+GGG - chr3_1:19650906-19650925 Msa0352000:intron 35.0%
! TAAGGTTTGTTTCCTGTCTA+GGG - chr3_1:19650943-19650962 Msa0352000:intron 35.0%
TAAATTGGCACCATCTGTTT+GGG + chr3_1:19651019-19651038 None:intergenic 35.0%
TTTGTATGAAAAGCTAACCG+TGG - chr3_1:19651099-19651118 Msa0352000:intron 35.0%
AATTCTACAATGTGCTTCCA+CGG + chr3_1:19651119-19651138 None:intergenic 35.0%
GAAAATTTGTGAAGGATTGG+TGG - chr3_1:19651161-19651180 Msa0352000:intron 35.0%
ACGGAAACATGACAATTTCT+TGG + chr3_1:19651330-19651349 None:intergenic 35.0%
AAGAAATTGTCATGTTTCCG+TGG - chr3_1:19651329-19651348 Msa0352000:intron 35.0%
CATAACCTGTCGATACAATA+TGG + chr3_1:19651509-19651528 None:intergenic 35.0%
! TATTGTATCGACAGGTTATG+TGG - chr3_1:19651509-19651528 Msa0352000:intron 35.0%
AAAACCAAACCACGTAATGA+TGG - chr3_1:19651578-19651597 Msa0352000:intron 35.0%
GTATTAAACTGCAGCTAGTT+TGG + chr3_1:19651628-19651647 None:intergenic 35.0%
CTAGCTGCAGTTTAATACAA+CGG - chr3_1:19651630-19651649 Msa0352000:intron 35.0%
ATGAAAACCCCATCTGTTTA+AGG - chr3_1:19651653-19651672 Msa0352000:intron 35.0%
ATTCCGAACCTTAAACAGAT+GGG + chr3_1:19651664-19651683 None:intergenic 35.0%
! TATATACCGACCCGATTTTT+AGG - chr3_1:19651811-19651830 Msa0352000:intron 35.0%
TAGTATCCTAAAAATCGGGT+CGG + chr3_1:19651820-19651839 None:intergenic 35.0%
! TTGGATTTTATCGGAGATAG+AGG - chr3_1:19651900-19651919 Msa0352000:intron 35.0%
TATCGGAGATAGAGGAATTA+AGG - chr3_1:19651908-19651927 Msa0352000:intron 35.0%
ATCGGAGATAGAGGAATTAA+GGG - chr3_1:19651909-19651928 Msa0352000:intron 35.0%
AGTCATATTCTTACCTCACA+AGG - chr3_1:19652072-19652091 Msa0352000:intron 35.0%
!! AATGAAGTTGATACCTTGTG+AGG + chr3_1:19652088-19652107 None:intergenic 35.0%
TCATAAATGATGTATGGGAG+AGG + chr3_1:19652259-19652278 None:intergenic 35.0%
TTTCCCAACTGCAAAATACT+TGG + chr3_1:19652327-19652346 None:intergenic 35.0%
GGCTTATTTAGATGCTGTTA+TGG + chr3_1:19652504-19652523 None:intergenic 35.0%
! TTTGATTGCTAATGAGTTGG+TGG + chr3_1:19652603-19652622 None:intergenic 35.0%
AACTTAAAACTTGTCGCAGA+CGG - chr3_1:19652681-19652700 Msa0352000:intron 35.0%
GTGCATGGAAAATTGACTAA+AGG + chr3_1:19652774-19652793 None:intergenic 35.0%
! AATCCAAGATTGACTCCATT+AGG - chr3_1:19652855-19652874 Msa0352000:intron 35.0%
GGAAGTTAAATGCGCTATTT+GGG + chr3_1:19652907-19652926 None:intergenic 35.0%
AGGAAGTTAAATGCGCTATT+TGG + chr3_1:19652908-19652927 None:intergenic 35.0%
!! GACAAATCCTTTTTCTGAAG+AGG + chr3_1:19652928-19652947 None:intergenic 35.0%
! ATTAGTTCTCCATGAAAAGG+AGG + chr3_1:19653023-19653042 None:intergenic 35.0%
CATCAATTAACAGCTACAAC+AGG + chr3_1:19653484-19653503 None:intergenic 35.0%
!! ATTGCCTTTTAAAAGCTCCA+GGG - chr3_1:19653541-19653560 Msa0352000:intron 35.0%
TCGTTTGTGACCATTAAACT+CGG - chr3_1:19653661-19653680 Msa0352000:intron 35.0%
CAAACTAAAAGGACTAAACG+AGG - chr3_1:19653860-19653879 Msa0352000:intron 35.0%
GAGGAAATAGAAAATTGTGG+TGG + chr3_1:19654038-19654057 None:intergenic 35.0%
GGAGAGGAAATAGAAAATTG+TGG + chr3_1:19654041-19654060 None:intergenic 35.0%
!! CTTGCTTGTTAGGTTTTTGT+TGG - chr3_1:19654371-19654390 Msa0352000:intron 35.0%
TTGTGAAGAAGATCAAGACA+TGG - chr3_1:19654424-19654443 Msa0352000:intron 35.0%
TGCAGCTCAACACATTATAA+AGG - chr3_1:19654451-19654470 Msa0352000:intron 35.0%
! TGAGTTGAGAAAAACTCTCT+TGG - chr3_1:19654502-19654521 Msa0352000:intron 35.0%
! GAACTTGTTCAAAGAGCTAA+TGG - chr3_1:19643364-19643383 Msa0352000:CDS 35.0%
! TGGATCATTTGGTTCAATTG+AGG - chr3_1:19643510-19643529 Msa0352000:CDS 35.0%
TCCTAGAACTGATGAAGATA+TGG + chr3_1:19655066-19655085 None:intergenic 35.0%
!! AATGAGAAAGTACTCATCCA+AGG + chr3_1:19655095-19655114 None:intergenic 35.0%
ATCGTTCATACGTATCTAGT+TGG - chr3_1:19655211-19655230 Msa0352000:CDS 35.0%
CAATTGTGTAAGCAGATTCT+TGG - chr3_1:19643859-19643878 Msa0352000:CDS 35.0%
GGAGAAACAAAGCTGATAAA+TGG + chr3_1:19655278-19655297 None:intergenic 35.0%
! ACTTGACATGTATGAGGTTT+TGG - chr3_1:19655387-19655406 Msa0352000:CDS 35.0%
! CACAAACTTCTAAGAAGCTT+TGG - chr3_1:19644096-19644115 Msa0352000:CDS 35.0%
! AATAAATGTTTTCCTGGTGG+AGG - chr3_1:19644177-19644196 Msa0352000:CDS 35.0%
! ATCAAGGCACTTGTTGAATA+TGG - chr3_1:19644234-19644253 Msa0352000:CDS 35.0%
GTTCAATTGCTTGCAACTTA+AGG - chr3_1:19644346-19644365 Msa0352000:CDS 35.0%
AGCAACATCAGTGTATAACT+TGG + chr3_1:19644412-19644431 None:intergenic 35.0%
TTATGCTAGAAGCTATGAGA+AGG - chr3_1:19644554-19644573 Msa0352000:CDS 35.0%
AGTACTTTCTGTGTTTAGTG+AGG - chr3_1:19655972-19655991 Msa0352000:CDS 35.0%
GAGGAAAGTTTATCGAATTG+CGG - chr3_1:19644609-19644628 Msa0352000:CDS 35.0%
GAAGTATACAAAACACAGAC+AGG - chr3_1:19656066-19656085 Msa0352000:CDS 35.0%
TCGCGAAGATCTACAAATAT+CGG - chr3_1:19644731-19644750 Msa0352000:CDS 35.0%
AGTTTCTACCGGTATAACTT+CGG + chr3_1:19644782-19644801 None:intergenic 35.0%
AATGTTAGACGAGTTTCTAC+CGG + chr3_1:19644793-19644812 None:intergenic 35.0%
! TGAGAATGGTGCAAAGATTT+TGG + chr3_1:19656267-19656286 None:intergenic 35.0%
AGATATGGCAAAACTCCTGA+TGG + chr3_1:19643669-19643688 None:intergenic 40.0%
GCCATATCTTCATTGCTTCA+AGG - chr3_1:19643680-19643699 Msa0352000:CDS 40.0%
! AATGACAAAGTACTCAGCCA+AGG + chr3_1:19643713-19643732 None:intergenic 40.0%
TGAATCGCCGGATAAAGAAA+TGG - chr3_1:19643788-19643807 Msa0352000:CDS 40.0%
! GCCGGATAAAGAAATGGATT+TGG - chr3_1:19643794-19643813 Msa0352000:CDS 40.0%
TGTTTCTCCGAAATATCTCG+AGG - chr3_1:19643907-19643926 Msa0352000:CDS 40.0%
!! GCGCCTTTTAAATTTTGGTG+AGG - chr3_1:19643939-19643958 Msa0352000:CDS 40.0%
! TTTTGGTGAGGCCATAACAA+TGG - chr3_1:19643951-19643970 Msa0352000:CDS 40.0%
TTTGGTGAGGCCATAACAAT+GGG - chr3_1:19643952-19643971 Msa0352000:CDS 40.0%
TGAAACTTCGACTGATCTTG+CGG - chr3_1:19644284-19644303 Msa0352000:CDS 40.0%
!! CTTGGATTTGTTGCACAAGT+TGG + chr3_1:19644394-19644413 None:intergenic 40.0%
TCTTCGCGAAGTTCTTTATC+AGG + chr3_1:19644720-19644739 None:intergenic 40.0%
CGTCTAACATTGATGAGAAG+TGG - chr3_1:19644802-19644821 Msa0352000:CDS 40.0%
!! CGCATGGGTTATGTGTTTTT+GGG - chr3_1:19645379-19645398 Msa0352000:intron 40.0%
!! GTTTTTGGGCGTTTTTGCAT+TGG - chr3_1:19645393-19645412 Msa0352000:intron 40.0%
!! TCTTTTGAGTGTGTAGGTCA+TGG + chr3_1:19645453-19645472 None:intergenic 40.0%
!! TACCTCTCTTTTGAGTGTGT+AGG + chr3_1:19645459-19645478 None:intergenic 40.0%
CTTAAGTTAGCGAGAGATTG+AGG + chr3_1:19645509-19645528 None:intergenic 40.0%
CGCTAACTTAAGCATATGAG+TGG - chr3_1:19645517-19645536 Msa0352000:intron 40.0%
ATGTTATTGAAGCACGATGG+AGG + chr3_1:19645581-19645600 None:intergenic 40.0%
CTGATGTTATTGAAGCACGA+TGG + chr3_1:19645584-19645603 None:intergenic 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr3_1:19645973-19645992 None:intergenic 40.0%
! TGTTGACTGTTATAAGCCAG+GGG + chr3_1:19646182-19646201 None:intergenic 40.0%
ATATGCTAAACAGTGCCCTT+AGG - chr3_1:19646346-19646365 Msa0352000:intron 40.0%
TATGCTAAACAGTGCCCTTA+GGG - chr3_1:19646347-19646366 Msa0352000:intron 40.0%
TATGCTAACCATTGCCCTAA+GGG + chr3_1:19646504-19646523 None:intergenic 40.0%
TTATGCTAACCATTGCCCTA+AGG + chr3_1:19646505-19646524 None:intergenic 40.0%
AAGGTCCATCTAACCAGAAA+GGG + chr3_1:19646789-19646808 None:intergenic 40.0%
CGCACAATTGGCAAAAAGAT+AGG + chr3_1:19646837-19646856 None:intergenic 40.0%
GCTCAAAAAAGAAGAAGAGG+GGG + chr3_1:19646868-19646887 None:intergenic 40.0%
CGCTCAAAAAAGAAGAAGAG+GGG + chr3_1:19646869-19646888 None:intergenic 40.0%
TTAAGGGAGTTGTTGACACT+TGG + chr3_1:19647305-19647324 None:intergenic 40.0%
!! TAGGCTTGCTGCTTTGTTAA+GGG + chr3_1:19647321-19647340 None:intergenic 40.0%
!! TTAGGCTTGCTGCTTTGTTA+AGG + chr3_1:19647322-19647341 None:intergenic 40.0%
AGCATGATGTACCAAAGTGT+AGG - chr3_1:19647353-19647372 Msa0352000:intron 40.0%
CTTGCGTATCTCAACAAATC+TGG - chr3_1:19647395-19647414 Msa0352000:intron 40.0%
! CTTTTGGCCTCTTTTTGATG+TGG + chr3_1:19647557-19647576 None:intergenic 40.0%
ACGATAAGAGATATGGTGGT+TGG + chr3_1:19647583-19647602 None:intergenic 40.0%
GTTCACGATAAGAGATATGG+TGG + chr3_1:19647587-19647606 None:intergenic 40.0%
ACGAAAAACATACTAGACGC+CGG - chr3_1:19647620-19647639 Msa0352000:intron 40.0%
TAGTGGTGTTTGTGTGTAAC+CGG + chr3_1:19647656-19647675 None:intergenic 40.0%
! GCTGGTGATTTGTGTTTGTT+TGG + chr3_1:19647684-19647703 None:intergenic 40.0%
! GTGTTAACATTCCGGTTTTC+AGG - chr3_1:19647908-19647927 Msa0352000:intron 40.0%
! GTTAACATTCCGGTTTTCAG+GGG - chr3_1:19647910-19647929 Msa0352000:intron 40.0%
ATGTCTATTCCCCTGAAAAC+CGG + chr3_1:19647922-19647941 None:intergenic 40.0%
ACATAGAACGTTCCTCCTTA+AGG - chr3_1:19648151-19648170 Msa0352000:intron 40.0%
! ACAACTGCATAAAAGGGTGT+TGG - chr3_1:19648571-19648590 Msa0352000:intron 40.0%
!! ATAAAAGGGTGTTGGTGGTT+GGG - chr3_1:19648579-19648598 Msa0352000:intron 40.0%
! TTGGTGGTTGGGGATAATTA+AGG - chr3_1:19648590-19648609 Msa0352000:intron 40.0%
TGGTGGTTGGGGATAATTAA+GGG - chr3_1:19648591-19648610 Msa0352000:intron 40.0%
!! ATTAAGGGTATTGGGATGGT+TGG - chr3_1:19648606-19648625 Msa0352000:intron 40.0%
GCTAACAAATGCTTTGTCTC+TGG - chr3_1:19648656-19648675 Msa0352000:intron 40.0%
TTGTCTCTGGTCTCTATCTA+TGG - chr3_1:19648669-19648688 Msa0352000:intron 40.0%
TACAACGTGCCGTATATATG+CGG - chr3_1:19649317-19649336 Msa0352000:intron 40.0%
ATGGGTGTACCGCATATATA+CGG + chr3_1:19649329-19649348 None:intergenic 40.0%
TATATATGCGGTACACCCAT+AGG - chr3_1:19649329-19649348 Msa0352000:intron 40.0%
!!! TCTTGCTTTTGGTGTTAGGT+GGG + chr3_1:19649385-19649404 None:intergenic 40.0%
!!! TTTTTTTTGAGGCCCATCCT+TGG - chr3_1:19649494-19649513 Msa0352000:intron 40.0%
!!! TTTTTTTGAGGCCCATCCTT+GGG - chr3_1:19649495-19649514 Msa0352000:intron 40.0%
ATTTACTCCTATCAGCCAGT+GGG + chr3_1:19649765-19649784 None:intergenic 40.0%
TATTTACTCCTATCAGCCAG+TGG + chr3_1:19649766-19649785 None:intergenic 40.0%
! GTGCTTTTGTGATAGCATGA+TGG - chr3_1:19649825-19649844 Msa0352000:intron 40.0%
! TGATAGCATGATGGAGTACT+TGG - chr3_1:19649834-19649853 Msa0352000:intron 40.0%
TGTTCTCCCAAACTGTGTTA+CGG + chr3_1:19649869-19649888 None:intergenic 40.0%
! GTTGTTAAGTGACTTGTGCA+TGG + chr3_1:19649961-19649980 None:intergenic 40.0%
CACTTAACAACAACAACCAC+AGG - chr3_1:19649970-19649989 Msa0352000:intron 40.0%
TCTGAGCCTCAAAATAGAGT+GGG - chr3_1:19650041-19650060 Msa0352000:intron 40.0%
! TCCTTTCCCACTCTATTTTG+AGG + chr3_1:19650050-19650069 None:intergenic 40.0%
AAATAGAGTGGGAAAGGATG+TGG - chr3_1:19650052-19650071 Msa0352000:intron 40.0%
GATGTGGCTATATCCGATAA+TGG - chr3_1:19650068-19650087 Msa0352000:intron 40.0%
GGGAAAGAATGTGTGATTGT+TGG - chr3_1:19650101-19650120 Msa0352000:intron 40.0%
! GATTGTTGGCTGATATCGAA+TGG - chr3_1:19650115-19650134 Msa0352000:intron 40.0%
! GGGATTTAGGTCTCAGTTTT+TGG + chr3_1:19650493-19650512 None:intergenic 40.0%
GCATGTGAAGTTAGGGATTT+AGG + chr3_1:19650506-19650525 None:intergenic 40.0%
ATCCCTAACTTCACATGCAT+TGG - chr3_1:19650508-19650527 Msa0352000:intron 40.0%
GTCCAATGCATGTGAAGTTA+GGG + chr3_1:19650513-19650532 None:intergenic 40.0%
! ACCTAAATCCCTAGTGGATA+AGG - chr3_1:19650531-19650550 Msa0352000:intron 40.0%
TCCTTATCCACTAGGGATTT+AGG + chr3_1:19650535-19650554 None:intergenic 40.0%
! TAAATCCCTAGTGGATAAGG+AGG - chr3_1:19650534-19650553 Msa0352000:intron 40.0%
GTGTGAGAAATGCATATCAG+GGG + chr3_1:19650601-19650620 None:intergenic 40.0%
CGTGTGAGAAATGCATATCA+GGG + chr3_1:19650602-19650621 None:intergenic 40.0%
ACGTGTGAGAAATGCATATC+AGG + chr3_1:19650603-19650622 None:intergenic 40.0%
ATGATACAGGAAGATGGATG+GGG - chr3_1:19650907-19650926 Msa0352000:intron 40.0%
! GTAAGGTTTGTTTCCTGTCT+AGG - chr3_1:19650942-19650961 Msa0352000:intron 40.0%
!! GGTTGATTCGTCTAAGTGTA+AGG + chr3_1:19650991-19651010 None:intergenic 40.0%
GTAAATTGGCACCATCTGTT+TGG + chr3_1:19651020-19651039 None:intergenic 40.0%
! GATGGTGCCAATTTACATAG+TGG - chr3_1:19651024-19651043 Msa0352000:intron 40.0%
!! CAAGGTGCCACTATGTAAAT+TGG + chr3_1:19651034-19651053 None:intergenic 40.0%
! AAGGATTGGTGGGTATTTGT+AGG - chr3_1:19651172-19651191 Msa0352000:intron 40.0%
! AGGATTGGTGGGTATTTGTA+GGG - chr3_1:19651173-19651192 Msa0352000:intron 40.0%
GTATTTGTAGGGGAGATTTG+TGG - chr3_1:19651184-19651203 Msa0352000:intron 40.0%
AACTCATACTTTGTAGGGTG+AGG - chr3_1:19651430-19651449 Msa0352000:intron 40.0%
ACTCATACTTTGTAGGGTGA+GGG - chr3_1:19651431-19651450 Msa0352000:intron 40.0%
! GTAGTCCATATTGTATCGAC+AGG - chr3_1:19651501-19651520 Msa0352000:intron 40.0%
! AACCCCATCTGTTTAAGGTT+CGG - chr3_1:19651658-19651677 Msa0352000:intron 40.0%
TTCCGAACCTTAAACAGATG+GGG + chr3_1:19651663-19651682 None:intergenic 40.0%
CATTCCGAACCTTAAACAGA+TGG + chr3_1:19651665-19651684 None:intergenic 40.0%
TGATGTCACACTGTGTCATA+AGG - chr3_1:19651683-19651702 Msa0352000:intron 40.0%
GATGTCACACTGTGTCATAA+GGG - chr3_1:19651684-19651703 Msa0352000:intron 40.0%
! GTTGTATGGAGGGTTTTACA+GGG + chr3_1:19651774-19651793 None:intergenic 40.0%
! AGTTGTATGGAGGGTTTTAC+AGG + chr3_1:19651775-19651794 None:intergenic 40.0%
ACTGTGGATATCAACATCGA+TGG + chr3_1:19652012-19652031 None:intergenic 40.0%
!! TTGTGGTGTTATAGAGACTG+TGG + chr3_1:19652028-19652047 None:intergenic 40.0%
! GGTTCTCTGAAGAATTCTTG+TGG + chr3_1:19652045-19652064 None:intergenic 40.0%
ATTGTAGATGCTTCTGCAGA+AGG + chr3_1:19652141-19652160 None:intergenic 40.0%
CATTTCTGACATCTTGTGAC+CGG - chr3_1:19652208-19652227 Msa0352000:intron 40.0%
ATTTCTGACATCTTGTGACC+GGG - chr3_1:19652209-19652228 Msa0352000:intron 40.0%
AAAATACTTGGCGCGAAAGA+AGG + chr3_1:19652315-19652334 None:intergenic 40.0%
TGGCTATTCTCTATCCGAAA+AGG + chr3_1:19652429-19652448 None:intergenic 40.0%
!! GGACTGTGTTATTTAGACTC+AGG + chr3_1:19652457-19652476 None:intergenic 40.0%
! GCTCAGTCAGCTTTTGTTAA+GGG + chr3_1:19652647-19652666 None:intergenic 40.0%
AAACTTAACCCCTCCTCAAT+TGG - chr3_1:19652948-19652967 Msa0352000:intron 40.0%
AACTTAACCCCTCCTCAATT+GGG - chr3_1:19652949-19652968 Msa0352000:intron 40.0%
CTATTGTTCATTGGCATGTG+AGG + chr3_1:19653075-19653094 None:intergenic 40.0%
! GGTAGGCCAAATACCATTTT+TGG - chr3_1:19653365-19653384 Msa0352000:intron 40.0%
!! CATTGCCTTTTAAAAGCTCC+AGG - chr3_1:19653540-19653559 Msa0352000:intron 40.0%
AGTCAAAACGCCGAGTTTAA+TGG + chr3_1:19653674-19653693 None:intergenic 40.0%
GTTCCAAGTCAGCAACTTAA+CGG - chr3_1:19653722-19653741 Msa0352000:intron 40.0%
CCATTTAACAGATGCTGATG+TGG + chr3_1:19653748-19653767 None:intergenic 40.0%
CCACATCAGCATCTGTTAAA+TGG - chr3_1:19653745-19653764 Msa0352000:intron 40.0%
TTAAATGGAGACTGACAGCA+GGG - chr3_1:19653760-19653779 Msa0352000:intron 40.0%
! TCCTTTGTTGAAGTGTTCGT+CGG - chr3_1:19653904-19653923 Msa0352000:intron 40.0%
TGTCTCAAGTTTCTTTGGCT+TGG - chr3_1:19654198-19654217 Msa0352000:intron 40.0%
TCTTCACAAGCTGAGATCAT+AGG + chr3_1:19654413-19654432 None:intergenic 40.0%
AGTTGTTATGTCAAGGCTTG+AGG - chr3_1:19654778-19654797 Msa0352000:CDS 40.0%
AAAAAATCAACGATGCGTCG+TGG - chr3_1:19654918-19654937 Msa0352000:CDS 40.0%
AGATATGGCAAAACTCCTGA+TGG + chr3_1:19643669-19643688 None:intergenic 40.0%
GCCATATCTTCATCAGTTCT+AGG - chr3_1:19655062-19655081 Msa0352000:intron 40.0%
AAGCAGATTCTTGGAGACTT+CGG - chr3_1:19655250-19655269 Msa0352000:CDS 40.0%
CTCCAAAATATCTCGGAGTT+CGG - chr3_1:19655294-19655313 Msa0352000:CDS 40.0%
! TACCGAACTCCGAGATATTT+TGG + chr3_1:19655299-19655318 None:intergenic 40.0%
!! GCGCCTTTTAAATTTTGGTG+AGG - chr3_1:19643939-19643958 Msa0352000:CDS 40.0%
CGGCCTCACCAAAATTTAAA+AGG + chr3_1:19655327-19655346 None:intergenic 40.0%
TGAAACTTCGACTGATCTTG+CGG - chr3_1:19644284-19644303 Msa0352000:CDS 40.0%
!! CTTGGATTTGTTGCACAAGT+TGG + chr3_1:19644394-19644413 None:intergenic 40.0%
GCTGAAACATTCCAACATGT+TGG + chr3_1:19655915-19655934 None:intergenic 40.0%
TATACAAAACACAGACAGGG+TGG - chr3_1:19656070-19656089 Msa0352000:CDS 40.0%
TCTTCGCGAAGTTCTTTATC+AGG + chr3_1:19644720-19644739 None:intergenic 40.0%
CGTCTAACATTGATGAGAAG+TGG - chr3_1:19644802-19644821 Msa0352000:CDS 40.0%
GTCAAGGCTTAAGGATGAGT+TGG - chr3_1:19643405-19643424 Msa0352000:CDS 45.0%
ATCAATAGTACTGCTCGCCT+CGG + chr3_1:19643581-19643600 None:intergenic 45.0%
! GGCGAGCAGTACTATTGATT+TGG - chr3_1:19643582-19643601 Msa0352000:CDS 45.0%
! GAAATGGATTTGGGCGATGA+AGG - chr3_1:19643804-19643823 Msa0352000:CDS 45.0%
AAGCAGATTCTCGGAGACTT+TGG - chr3_1:19643868-19643887 Msa0352000:CDS 45.0%
TGTGTGCGTTCCCATTGTTA+TGG + chr3_1:19643965-19643984 None:intergenic 45.0%
!!! GGTTTTGGAACTTCTAGCAG+TGG - chr3_1:19644020-19644039 Msa0352000:CDS 45.0%
! GCACAAGTTGGATTCTAGAG+TGG + chr3_1:19644382-19644401 None:intergenic 45.0%
GCTGAAACATGCCAACATGT+CGG + chr3_1:19644533-19644552 None:intergenic 45.0%
GAAGCTATGAGAAGGTGACT+TGG - chr3_1:19644562-19644581 Msa0352000:CDS 45.0%
CCTGCTTACCGAAGTTATAC+CGG - chr3_1:19644771-19644790 Msa0352000:CDS 45.0%
GAAGTGGATCAAGTATACGG+TGG - chr3_1:19644818-19644837 Msa0352000:CDS 45.0%
GGACAGGCCTCATCTAATAT+TGG + chr3_1:19645227-19645246 None:intergenic 45.0%
!! GCGCATGGGTTATGTGTTTT+TGG - chr3_1:19645378-19645397 Msa0352000:intron 45.0%
GACCTACACACTCAAAAGAG+AGG - chr3_1:19645454-19645473 Msa0352000:intron 45.0%
! CTCTTTGGTAGGGGTGTATT+TGG + chr3_1:19645545-19645564 None:intergenic 45.0%
TCGACATGAGCTCTTTGGTA+GGG + chr3_1:19645555-19645574 None:intergenic 45.0%
ATCGACATGAGCTCTTTGGT+AGG + chr3_1:19645556-19645575 None:intergenic 45.0%
CCTCTTAACCAATGCCCTAA+GGG + chr3_1:19646364-19646383 None:intergenic 45.0%
TCCTCTTAACCAATGCCCTA+AGG + chr3_1:19646365-19646384 None:intergenic 45.0%
TTCCCTTAACTAGTGCCCTT+AGG - chr3_1:19646486-19646505 Msa0352000:intron 45.0%
TCCCTTAACTAGTGCCCTTA+GGG - chr3_1:19646487-19646506 Msa0352000:intron 45.0%
AGAAAGGGGGCAAAAAGATG+GGG + chr3_1:19646774-19646793 None:intergenic 45.0%
CAGAAAGGGGGCAAAAAGAT+GGG + chr3_1:19646775-19646794 None:intergenic 45.0%
AGGTCCATCTAACCAGAAAG+GGG + chr3_1:19646788-19646807 None:intergenic 45.0%
GAAGGTCCATCTAACCAGAA+AGG + chr3_1:19646790-19646809 None:intergenic 45.0%
GGGGTGTAAAATCGCACAAT+TGG + chr3_1:19646849-19646868 None:intergenic 45.0%
GGGAAATGAGGCAAAAGATG+GGG + chr3_1:19646900-19646919 None:intergenic 45.0%
GGGGAAATGAGGCAAAAGAT+GGG + chr3_1:19646901-19646920 None:intergenic 45.0%
AGGGGAAATGAGGCAAAAGA+TGG + chr3_1:19646902-19646921 None:intergenic 45.0%
TAAATTAGCGAACCCGCGTA+CGG - chr3_1:19647178-19647197 Msa0352000:intron 45.0%
CGTTAGTAACCAGACCCTTT+CGG - chr3_1:19647493-19647512 Msa0352000:intron 45.0%
GTTAGTAACCAGACCCTTTC+GGG - chr3_1:19647494-19647513 Msa0352000:intron 45.0%
ACGGTTCTGTTAACCCGAAA+GGG + chr3_1:19647510-19647529 None:intergenic 45.0%
TACGGTTCTGTTAACCCGAA+AGG + chr3_1:19647511-19647530 None:intergenic 45.0%
! GGCCTCTTTTTGATGTGGTT+TGG + chr3_1:19647552-19647571 None:intergenic 45.0%
CAAACACAAATCACCAGCCT+CGG - chr3_1:19647686-19647705 Msa0352000:intron 45.0%
! GTGGGCTGTTTGCTTTCTTA+GGG + chr3_1:19647753-19647772 None:intergenic 45.0%
!! ACTGCATAAAAGGGTGTTGG+TGG - chr3_1:19648574-19648593 Msa0352000:intron 45.0%
!! CATAAAAGGGTGTTGGTGGT+TGG - chr3_1:19648578-19648597 Msa0352000:intron 45.0%
!! TAAAAGGGTGTTGGTGGTTG+GGG - chr3_1:19648580-19648599 Msa0352000:intron 45.0%
AGCACAGTTGATTAGAGCGT+TGG - chr3_1:19648918-19648937 Msa0352000:intron 45.0%
!! TCAGCTCTGGGAATGAAAAG+AGG - chr3_1:19649225-19649244 Msa0352000:intron 45.0%
GTGGGGATTCCTCATGTATA+CGG + chr3_1:19649367-19649386 None:intergenic 45.0%
!!! CTTGCTTTTGGTGTTAGGTG+GGG + chr3_1:19649384-19649403 None:intergenic 45.0%
!!! CTCTTGCTTTTGGTGTTAGG+TGG + chr3_1:19649386-19649405 None:intergenic 45.0%
!!! TTTTTTGAGGCCCATCCTTG+GGG - chr3_1:19649496-19649515 Msa0352000:intron 45.0%
! AGCATGATGGAGTACTTGGT+TGG - chr3_1:19649838-19649857 Msa0352000:intron 45.0%
! ATGATGGAGTACTTGGTTGG+AGG - chr3_1:19649841-19649860 Msa0352000:intron 45.0%
AAAGGGGTAAGTGTCTCTAG+AGG - chr3_1:19649916-19649935 Msa0352000:intron 45.0%
AACAACCACAGGTTCTGTAG+AGG - chr3_1:19649981-19650000 Msa0352000:intron 45.0%
CTCTGAGCCTCAAAATAGAG+TGG - chr3_1:19650040-19650059 Msa0352000:intron 45.0%
GCCTCAAAATAGAGTGGGAA+AGG - chr3_1:19650046-19650065 Msa0352000:intron 45.0%
TATCGAATGGGTGGAAGAGT+TGG - chr3_1:19650128-19650147 Msa0352000:intron 45.0%
ATCGAATGGGTGGAAGAGTT+GGG - chr3_1:19650129-19650148 Msa0352000:intron 45.0%
TACTCTTGACTCTACAAGCG+TGG - chr3_1:19650170-19650189 Msa0352000:intron 45.0%
GGTCCAATGCATGTGAAGTT+AGG + chr3_1:19650514-19650533 None:intergenic 45.0%
CATTGGACCTAAATCCCTAG+TGG - chr3_1:19650525-19650544 Msa0352000:intron 45.0%
AAGTCTCATTCTCCCTAGAC+AGG + chr3_1:19650958-19650977 None:intergenic 45.0%
! GGATTGGTGGGTATTTGTAG+GGG - chr3_1:19651174-19651193 Msa0352000:intron 45.0%
TTTGTAGGGGAGATTTGTGG+TGG - chr3_1:19651187-19651206 Msa0352000:intron 45.0%
GTGTCCATCATTACGTGGTT+TGG + chr3_1:19651585-19651604 None:intergenic 45.0%
!! GAGAAGTGTCCATCATTACG+TGG + chr3_1:19651590-19651609 None:intergenic 45.0%
!! GTAAGAATAGGACTTGCTGC+AGG - chr3_1:19651960-19651979 Msa0352000:intron 45.0%
CGGGACTAAAACCAGATACT+TGG + chr3_1:19652166-19652185 None:intergenic 45.0%
TATCATGCAAGCCTTCACGA+CGG + chr3_1:19652186-19652205 None:intergenic 45.0%
CGGTCACAAGATGTCAGAAA+TGG + chr3_1:19652210-19652229 None:intergenic 45.0%
GGTTCAAGCTACTCTTGAAG+AGG + chr3_1:19652238-19652257 None:intergenic 45.0%
! TCCTTCTTGTTGCTTCAAGC+TGG - chr3_1:19652283-19652302 Msa0352000:intron 45.0%
TCCAGCTTGAAGCAACAAGA+AGG + chr3_1:19652287-19652306 None:intergenic 45.0%
! GCGCCAAGTATTTTGCAGTT+GGG - chr3_1:19652321-19652340 Msa0352000:intron 45.0%
TCAAGATGGAGTTCTTGGAC+AGG + chr3_1:19652352-19652371 None:intergenic 45.0%
TCAGCTCAAGATGGAGTTCT+TGG + chr3_1:19652357-19652376 None:intergenic 45.0%
AAGCGGTTCAATCGAGACTT+GGG + chr3_1:19652381-19652400 None:intergenic 45.0%
TGGCTAGATGCTTTACCAAG+CGG + chr3_1:19652398-19652417 None:intergenic 45.0%
! TAGCCAATCTCTCGCCTTTT+CGG - chr3_1:19652412-19652431 Msa0352000:intron 45.0%
TATCCGAAAAGGCGAGAGAT+TGG + chr3_1:19652418-19652437 None:intergenic 45.0%
CTCCTGCAGATGCTATTATG+GGG + chr3_1:19652478-19652497 None:intergenic 45.0%
CCTCCTGCAGATGCTATTAT+GGG + chr3_1:19652479-19652498 None:intergenic 45.0%
TCCTCCTGCAGATGCTATTA+TGG + chr3_1:19652480-19652499 None:intergenic 45.0%
GACCTATGATTACGTGGACT+GGG + chr3_1:19652525-19652544 None:intergenic 45.0%
CGAAACGACCTATGATTACG+TGG + chr3_1:19652531-19652550 None:intergenic 45.0%
! GGCTCAGTCAGCTTTTGTTA+AGG + chr3_1:19652648-19652667 None:intergenic 45.0%
!! GATTTTTGGGAGGATCTGAC+AGG + chr3_1:19652828-19652847 None:intergenic 45.0%
GGTCCTAATGGAGTCAATCT+TGG + chr3_1:19652861-19652880 None:intergenic 45.0%
! AGATTGACTCCATTAGGACC+TGG - chr3_1:19652861-19652880 Msa0352000:intron 45.0%
! GATTGACTCCATTAGGACCT+GGG - chr3_1:19652862-19652881 Msa0352000:intron 45.0%
ACTTAACCCCTCCTCAATTG+GGG - chr3_1:19652950-19652969 Msa0352000:intron 45.0%
TCGTAACAAGGTAGCCATAC+TGG - chr3_1:19652980-19652999 Msa0352000:intron 45.0%
AACAAGGTAGCCATACTGGA+AGG - chr3_1:19652984-19653003 Msa0352000:intron 45.0%
! ACTGGATCACCTCCTTTTCA+TGG - chr3_1:19653011-19653030 Msa0352000:intron 45.0%
! GACACCCTGGAGCTTTTAAA+AGG + chr3_1:19653548-19653567 None:intergenic 45.0%
!! AACATAGCGTTTTGACACCC+TGG + chr3_1:19653561-19653580 None:intergenic 45.0%
CAACGCATTAACAAGGCTTC+AGG + chr3_1:19653698-19653717 None:intergenic 45.0%
GTTAAATGGAGACTGACAGC+AGG - chr3_1:19653759-19653778 Msa0352000:intron 45.0%
TAAATGGAGACTGACAGCAG+GGG - chr3_1:19653761-19653780 Msa0352000:intron 45.0%
TCCGACGAACACTTCAACAA+AGG + chr3_1:19653908-19653927 None:intergenic 45.0%
AGTGAAGTTTCTTGTGGGAG+AGG + chr3_1:19654057-19654076 None:intergenic 45.0%
!! CTCAAGTTTCTTTGGCTTGG+AGG - chr3_1:19654201-19654220 Msa0352000:intron 45.0%
ATCTATAGCACTGCTCGCTT+CGG + chr3_1:19654963-19654982 None:intergenic 45.0%
AGCGAGCAGTGCTATAGATT+TGG - chr3_1:19654964-19654983 Msa0352000:intron 45.0%
! TTTTGGTGAGGCCGTAACAA+TGG - chr3_1:19655333-19655352 Msa0352000:intron 45.0%
TTTGGTGAGGCCGTAACAAT+GGG - chr3_1:19655334-19655353 Msa0352000:intron 45.0%
!!! GGTTTTGGAACTTCTAGCAG+TGG - chr3_1:19644020-19644039 Msa0352000:CDS 45.0%
! GCACAAGTTGGATTCTAGAG+TGG + chr3_1:19644382-19644401 None:intergenic 45.0%
GAAGCTATGAGAAGGTGACT+TGG - chr3_1:19644562-19644581 Msa0352000:CDS 45.0%
CCTGCTTACCGAAGTTATAC+CGG - chr3_1:19644771-19644790 Msa0352000:CDS 45.0%
!! TAATATATTATAACTATATT+TGG - chr3_1:19650451-19650470 Msa0352000:intron 5.0%
!!! TTTTTTTTATTTACATTTTT+TGG + chr3_1:19650767-19650786 None:intergenic 5.0%
!!! AATAAAATCTTTAAAATATT+AGG - chr3_1:19651067-19651086 Msa0352000:intron 5.0%
!!! ATAAAATCTTTAAAATATTA+GGG - chr3_1:19651068-19651087 Msa0352000:intron 5.0%
!! ATAAAATATAAACAATTATT+GGG + chr3_1:19651382-19651401 None:intergenic 5.0%
!! TATAAAATATAAACAATTAT+TGG + chr3_1:19651383-19651402 None:intergenic 5.0%
GAGGTTTCGAGGAGTAGTGA+CGG - chr3_1:19643547-19643566 Msa0352000:CDS 50.0%
TAGTGACGGTATCCAATCCG+AGG - chr3_1:19643561-19643580 Msa0352000:CDS 50.0%
TGCTTCAAGGAGAGAAGCCT+TGG - chr3_1:19643693-19643712 Msa0352000:CDS 50.0%
CCGGTATAACTTCGGTAAGC+AGG + chr3_1:19644774-19644793 None:intergenic 50.0%
CGAGAGATTGAGGTGAGCAT+GGG + chr3_1:19645499-19645518 None:intergenic 50.0%
CGACATGAGCTCTTTGGTAG+GGG + chr3_1:19645554-19645573 None:intergenic 50.0%
GGACATCGACATGAGCTCTT+TGG + chr3_1:19645560-19645579 None:intergenic 50.0%
CAACTAGTTCATTGGACCCC+TGG - chr3_1:19646163-19646182 Msa0352000:intron 50.0%
AAACAGTGCCCTTAGGGCAT+TGG - chr3_1:19646353-19646372 Msa0352000:intron 50.0%
!! CCCTTAGGGCATTGGTTAAG+AGG - chr3_1:19646361-19646380 Msa0352000:intron 50.0%
!! GCCCTAAGGGCACTAGTTAA+GGG + chr3_1:19646491-19646510 None:intergenic 50.0%
!! TGCCCTAAGGGCACTAGTTA+AGG + chr3_1:19646492-19646511 None:intergenic 50.0%
AACTAGTGCCCTTAGGGCAA+TGG - chr3_1:19646493-19646512 Msa0352000:intron 50.0%
CCAGAAAGGGGGCAAAAAGA+TGG + chr3_1:19646776-19646795 None:intergenic 50.0%
! CCATCTTTTTGCCCCCTTTC+TGG - chr3_1:19646773-19646792 Msa0352000:intron 50.0%
!! TTGCCCCCTTTCTGGTTAGA+TGG - chr3_1:19646781-19646800 Msa0352000:intron 50.0%
GGTCCATCTAACCAGAAAGG+GGG + chr3_1:19646787-19646806 None:intergenic 50.0%
ACGCGGGTTCGCTAATTTAC+AGG + chr3_1:19647177-19647196 None:intergenic 50.0%
AAATTAGCGAACCCGCGTAC+GGG - chr3_1:19647179-19647198 Msa0352000:intron 50.0%
CGTCTTGTCTGCCTACACTT+TGG + chr3_1:19647367-19647386 None:intergenic 50.0%
TCTGTTAACCCGAAAGGGTC+TGG + chr3_1:19647505-19647524 None:intergenic 50.0%
TGTAACCGGATGTTCGTCAC+CGG + chr3_1:19647642-19647661 None:intergenic 50.0%
GTGTTTGTTTGGGTCGCTAG+TGG + chr3_1:19647673-19647692 None:intergenic 50.0%
!! GGTGGGCTGTTTGCTTTCTT+AGG + chr3_1:19647754-19647773 None:intergenic 50.0%
GTTTGCACCCCCTTTATTGC+AGG - chr3_1:19649446-19649465 Msa0352000:intron 50.0%
!!! TTTTTGAGGCCCATCCTTGG+GGG - chr3_1:19649497-19649516 Msa0352000:intron 50.0%
GCAAACAGCTCAACTGAGCT+GGG + chr3_1:19649526-19649545 None:intergenic 50.0%
TGCAAACAGCTCAACTGAGC+TGG + chr3_1:19649527-19649546 None:intergenic 50.0%
TGAAGCTGAACTTGGGAGCA+GGG + chr3_1:19649565-19649584 None:intergenic 50.0%
ATGAAGCTGAACTTGGGAGC+AGG + chr3_1:19649566-19649585 None:intergenic 50.0%
TCATTGTCTCATTGGCCCAC+TGG - chr3_1:19649747-19649766 Msa0352000:intron 50.0%
GAGGAGCCGTAACACAGTTT+GGG - chr3_1:19649860-19649879 Msa0352000:intron 50.0%
! AGTGACTTGTGCATGGCCAT+TGG + chr3_1:19649954-19649973 None:intergenic 50.0%
AACCACAGGTTCTGTAGAGG+TGG - chr3_1:19649984-19650003 Msa0352000:intron 50.0%
GTTGGCTGATATCGAATGGG+TGG - chr3_1:19650119-19650138 Msa0352000:intron 50.0%
TACAGGAAGATGGATGGGGA+AGG - chr3_1:19650911-19650930 Msa0352000:intron 50.0%
!! TGGGGAAGGAGGTTGATGTA+AGG - chr3_1:19650925-19650944 Msa0352000:intron 50.0%
CAACCTTACGCCCAAACAGA+TGG - chr3_1:19651006-19651025 Msa0352000:intron 50.0%
!! AGAATAGGACTTGCTGCAGG+AGG - chr3_1:19651963-19651982 Msa0352000:intron 50.0%
!!! TGGTTTTAGTCCCGTCGTGA+AGG - chr3_1:19652172-19652191 Msa0352000:intron 50.0%
ATCATGCAAGCCTTCACGAC+GGG + chr3_1:19652185-19652204 None:intergenic 50.0%
!! CTACTCTTGAAGAGGTGTCC+CGG + chr3_1:19652230-19652249 None:intergenic 50.0%
! CGCGCCAAGTATTTTGCAGT+TGG - chr3_1:19652320-19652339 Msa0352000:intron 50.0%
GACTTGGGATCAGCTCAAGA+TGG + chr3_1:19652366-19652385 None:intergenic 50.0%
CAAGCGGTTCAATCGAGACT+TGG + chr3_1:19652382-19652401 None:intergenic 50.0%
CAAGTCTCGATTGAACCGCT+TGG - chr3_1:19652380-19652399 Msa0352000:intron 50.0%
GTCCCCATAATAGCATCTGC+AGG - chr3_1:19652473-19652492 Msa0352000:intron 50.0%
CCCATAATAGCATCTGCAGG+AGG - chr3_1:19652476-19652495 Msa0352000:intron 50.0%
AGCCCAGTCCACGTAATCAT+AGG - chr3_1:19652520-19652539 Msa0352000:intron 50.0%
CGACCTATGATTACGTGGAC+TGG + chr3_1:19652526-19652545 None:intergenic 50.0%
AAGGGCCGTCAGATTCTTGA+TGG + chr3_1:19652629-19652648 None:intergenic 50.0%
TTCAAGAGCCCAGGTCCTAA+TGG + chr3_1:19652873-19652892 None:intergenic 50.0%
TGTGACAGTTTCAAGAGCCC+AGG + chr3_1:19652882-19652901 None:intergenic 50.0%
TTCACTCCCCAATTGAGGAG+GGG + chr3_1:19652959-19652978 None:intergenic 50.0%
CTTCACTCCCCAATTGAGGA+GGG + chr3_1:19652960-19652979 None:intergenic 50.0%
ACTTCACTCCCCAATTGAGG+AGG + chr3_1:19652961-19652980 None:intergenic 50.0%
ACGACTTCACTCCCCAATTG+AGG + chr3_1:19652964-19652983 None:intergenic 50.0%
TGGGGAGTGAAGTCGTAACA+AGG - chr3_1:19652968-19652987 Msa0352000:intron 50.0%
! TGGCCGTTAAGTTGCTGACT+TGG + chr3_1:19653728-19653747 None:intergenic 50.0%
GTCAAGGCTTGAGGATGAGT+TGG - chr3_1:19654787-19654806 Msa0352000:CDS 50.0%
!! CAGTTCTAGGAGAGAAGCCT+TGG - chr3_1:19655075-19655094 Msa0352000:intron 50.0%
CGTGTGTGCTCCCATTGTTA+CGG + chr3_1:19655347-19655366 None:intergenic 50.0%
!! TTCTGGCTTCGCCAACATGT+TGG - chr3_1:19655901-19655920 Msa0352000:CDS 50.0%
CCGGTATAACTTCGGTAAGC+AGG + chr3_1:19644774-19644793 None:intergenic 50.0%
TAGTACTGCTCGCCTCGGAT+TGG + chr3_1:19643576-19643595 None:intergenic 55.0%
AGTGGCACTGCTTGAATCGC+CGG - chr3_1:19643776-19643795 Msa0352000:CDS 55.0%
AGATGGTGAACACCTCCACC+AGG + chr3_1:19644192-19644211 None:intergenic 55.0%
!! TTCTGGCTTCGCCGACATGT+TGG - chr3_1:19644519-19644538 Msa0352000:CDS 55.0%
TAGGTCATGGTCCTCGCACA+CGG + chr3_1:19645440-19645459 None:intergenic 55.0%
GCGAGAGATTGAGGTGAGCA+TGG + chr3_1:19645500-19645519 None:intergenic 55.0%
! TTGATTTTGGGCCCGTACGC+GGG + chr3_1:19647193-19647212 None:intergenic 55.0%
! CTTGATTTTGGGCCCGTACG+CGG + chr3_1:19647194-19647213 None:intergenic 55.0%
TTAGTAGGTGGTCGTTGCCG+AGG + chr3_1:19647706-19647725 None:intergenic 55.0%
GAAAGCAAACAGCCCACCCA+TGG - chr3_1:19647756-19647775 Msa0352000:intron 55.0%
AGCCTCCGAATTCTCAGGGA+CGG + chr3_1:19649206-19649225 None:intergenic 55.0%
GCTGAGCCTCCGAATTCTCA+GGG + chr3_1:19649210-19649229 None:intergenic 55.0%
AGCTGAGCCTCCGAATTCTC+AGG + chr3_1:19649211-19649230 None:intergenic 55.0%
AGAATTCGGAGGCTCAGCTC+TGG - chr3_1:19649212-19649231 Msa0352000:intron 55.0%
GAATTCGGAGGCTCAGCTCT+GGG - chr3_1:19649213-19649232 Msa0352000:intron 55.0%
! TCATTGGCCCACTGGCTGAT+AGG - chr3_1:19649755-19649774 Msa0352000:intron 55.0%
GGAGGAGCCGTAACACAGTT+TGG - chr3_1:19649859-19649878 Msa0352000:intron 55.0%
! GGGGTAAGTGTCTCTAGAGG+TGG - chr3_1:19649919-19649938 Msa0352000:intron 55.0%
TGCCACCTCTACAGAACCTG+TGG + chr3_1:19649989-19650008 None:intergenic 55.0%
GTGGGCCTCCTTATCCACTA+GGG + chr3_1:19650542-19650561 None:intergenic 55.0%
AGTGGGCCTCCTTATCCACT+AGG + chr3_1:19650543-19650562 None:intergenic 55.0%
AGGAAGATGGATGGGGAAGG+AGG - chr3_1:19650914-19650933 Msa0352000:intron 55.0%
GCACCATCTGTTTGGGCGTA+AGG + chr3_1:19651012-19651031 None:intergenic 55.0%
TCCAGTCACGCCTTCCAGTA+TGG + chr3_1:19652997-19653016 None:intergenic 55.0%
TAGCACTGCTCGCTTCGGAT+CGG + chr3_1:19654958-19654977 None:intergenic 55.0%
AGATGGTGAACACCTCCACC+AGG + chr3_1:19644192-19644211 None:intergenic 55.0%
AGGTCATGGTCCTCGCACAC+GGG + chr3_1:19645439-19645458 None:intergenic 60.0%
AGACGCCGGTGACGAACATC+CGG - chr3_1:19647634-19647653 Msa0352000:intron 60.0%
AGCAAACAGCCCACCCATGG+CGG - chr3_1:19647759-19647778 Msa0352000:intron 60.0%
GTTCGTCGATCCTCCGCCAT+GGG + chr3_1:19647775-19647794 None:intergenic 60.0%
TGTTCGTCGATCCTCCGCCA+TGG + chr3_1:19647776-19647795 None:intergenic 60.0%
CAGGGCCGTCCCTGAGAATT+CGG - chr3_1:19649198-19649217 Msa0352000:intron 60.0%
GAGCTGTTTGCACCCCCTCA+AGG - chr3_1:19649535-19649554 Msa0352000:intron 60.0%
TGTTTGCACCCCCTCAAGGC+CGG - chr3_1:19649539-19649558 Msa0352000:intron 60.0%
GAGGTGGCAGCAGCTTCCAA+TGG - chr3_1:19649935-19649954 Msa0352000:intron 60.0%
! GCCATACTGGAAGGCGTGAC+TGG - chr3_1:19652993-19653012 Msa0352000:intron 60.0%
GATGCGTCGTGGAGCAGTGA+TGG - chr3_1:19654929-19654948 Msa0352000:intron 60.0%
GAGACACACACCCGTGTGCG+AGG - chr3_1:19645426-19645445 Msa0352000:intron 65.0%
TAGGTGGTCGTTGCCGAGGC+TGG + chr3_1:19647702-19647721 None:intergenic 65.0%
AAACAGCCCACCCATGGCGG+AGG - chr3_1:19647762-19647781 Msa0352000:intron 65.0%
GTCGATCCTCCGCCATGGGT+GGG + chr3_1:19647771-19647790 None:intergenic 65.0%
TCTCAGGGACGGCCCTGCTT+GGG + chr3_1:19649195-19649214 None:intergenic 65.0%
TTCTCAGGGACGGCCCTGCT+TGG + chr3_1:19649196-19649215 None:intergenic 65.0%
GGCCGTCCCTGAGAATTCGG+AGG - chr3_1:19649201-19649220 Msa0352000:intron 65.0%
TTGAGGCCCATCCTTGGGGG+AGG - chr3_1:19649500-19649519 Msa0352000:intron 65.0%
GCTGAACTTGGGAGCAGGGC+CGG + chr3_1:19649561-19649580 None:intergenic 65.0%
GCGTCGTGGAGCAGTGATGG+TGG - chr3_1:19654932-19654951 Msa0352000:intron 65.0%
TGGCCTCTGCCTCATGCGCG+AGG - chr3_1:19645356-19645375 Msa0352000:intron 70.0%
TGCCTCATGCGCGAGGCGCA+TGG - chr3_1:19645363-19645382 Msa0352000:intron 70.0%
GCCTCATGCGCGAGGCGCAT+GGG - chr3_1:19645364-19645383 Msa0352000:intron 70.0%
ACCCATGCGCCTCGCGCATG+AGG + chr3_1:19645368-19645387 None:intergenic 70.0%
CGTCGATCCTCCGCCATGGG+TGG + chr3_1:19647772-19647791 None:intergenic 70.0%
GCTGGGCCTCCCCCAAGGAT+GGG + chr3_1:19649509-19649528 None:intergenic 70.0%
AGCTGGGCCTCCCCCAAGGA+TGG + chr3_1:19649510-19649529 None:intergenic 70.0%
ACTGAGCTGGGCCTCCCCCA+AGG + chr3_1:19649514-19649533 None:intergenic 70.0%
GCGCCTCGCGCATGAGGCAG+AGG + chr3_1:19645362-19645381 None:intergenic 75.0%
GAGCAGGGCCGGCCTTGAGG+GGG + chr3_1:19649550-19649569 None:intergenic 75.0%
GGAGCAGGGCCGGCCTTGAG+GGG + chr3_1:19649551-19649570 None:intergenic 75.0%
GGGAGCAGGGCCGGCCTTGA+GGG + chr3_1:19649552-19649571 None:intergenic 75.0%
TGGGAGCAGGGCCGGCCTTG+AGG + chr3_1:19649553-19649572 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 19643247 19656299 19643247 ID=Msa0352000;Name=Msa0352000
chr3_1 mRNA 19643247 19656299 19643247 ID=Msa0352000-mRNA-1;Parent=Msa0352000;Name=Msa0352000-mRNA-1;_AED=0.26;_eAED=0.28;_QI=0|0|0|1|0|0|8|0|1083
chr3_1 exon 19656108 19656299 19656108 ID=Msa0352000-mRNA-1:exon:4607;Parent=Msa0352000-mRNA-1
chr3_1 exon 19655896 19656095 19655896 ID=Msa0352000-mRNA-1:exon:4606;Parent=Msa0352000-mRNA-1
chr3_1 exon 19655613 19655844 19655613 ID=Msa0352000-mRNA-1:exon:4605;Parent=Msa0352000-mRNA-1
chr3_1 exon 19655354 19655525 19655354 ID=Msa0352000-mRNA-1:exon:4604;Parent=Msa0352000-mRNA-1
chr3_1 exon 19655134 19655347 19655134 ID=Msa0352000-mRNA-1:exon:4603;Parent=Msa0352000-mRNA-1
chr3_1 exon 19654971 19655066 19654971 ID=Msa0352000-mRNA-1:exon:4602;Parent=Msa0352000-mRNA-1
chr3_1 exon 19654710 19654938 19654710 ID=Msa0352000-mRNA-1:exon:4601;Parent=Msa0352000-mRNA-1
chr3_1 exon 19643247 19645163 19643247 ID=Msa0352000-mRNA-1:exon:4600;Parent=Msa0352000-mRNA-1
chr3_1 CDS 19656108 19656299 19656108 ID=Msa0352000-mRNA-1:cds;Parent=Msa0352000-mRNA-1
chr3_1 CDS 19655896 19656095 19655896 ID=Msa0352000-mRNA-1:cds;Parent=Msa0352000-mRNA-1
chr3_1 CDS 19655613 19655844 19655613 ID=Msa0352000-mRNA-1:cds;Parent=Msa0352000-mRNA-1
chr3_1 CDS 19655354 19655525 19655354 ID=Msa0352000-mRNA-1:cds;Parent=Msa0352000-mRNA-1
chr3_1 CDS 19655134 19655347 19655134 ID=Msa0352000-mRNA-1:cds;Parent=Msa0352000-mRNA-1
chr3_1 CDS 19654971 19655066 19654971 ID=Msa0352000-mRNA-1:cds;Parent=Msa0352000-mRNA-1
chr3_1 CDS 19654710 19654938 19654710 ID=Msa0352000-mRNA-1:cds;Parent=Msa0352000-mRNA-1
chr3_1 CDS 19643247 19645163 19643247 ID=Msa0352000-mRNA-1:cds;Parent=Msa0352000-mRNA-1
Gene Sequence

>Msa0352000

ATGAGTTTGGAGACAAATCATGAAATCATTTCTTCTTCTGAGTATTTAAAACTTGTTGATGAAATCCAAACTTTGCAACAAAAGTTTGATTCTGTGAATGGAAATTTGAAGCATAAGGAACTTGTTCAAAGAGCTAATGAAATTTTGCAAGTTGTTATGTCAAGGCTTAAGGATGAGTTGGTTCAAATTCTTCAATATTTTGAGCCTGATTACATGTCTTTCAATTCCAATAGAGTTGATATTGTGTATGATGGATCATTTGGTTCAATTGAGGATGAAAATATCAACGAGGTTTCGAGGAGTAGTGACGGTATCCAATCCGAGGCGAGCAGTACTATTGATTTGGTGCAACCTTCTATACTTGAAGATCTCAAAAGCATTGCTAATGCTATGAGAGAAGCCTTGGCTGAGTACTTTGTCATTCTAGAAATCGAAAAACTAAGCATCGAAAATGTGCTTAAAATGGAGTGGCACTGCTTGAATCGCCGGATAAAGAAATGGATTTGGGCGATGAAGGTCATCGTGCAGACGTATCTTGTCAGCGAGAAACAATTGTGTAAGCAGATTCTCGGAGACTTTGGATCCGTTTATCAGTTTTGTTTCTCCGAAATATCTCGAGGTTCAGTTTTGGAACTTCTAGCAGTGGATATAGATATTCTGTTCATTGAAGAAGTTGATTCTTTTGTCAGAGGAGAATTTCACAAACTTCTAAGAAGCTTTGGTGATACTATAAAATCTACATTTCTTGCATTTAGAAATGCTATTGCAACAAATCCATCAAATAAATGTTTTCCTGGTGTTCACCATCTTACAAGATATGTCATGAATTACATCAAGGCACTTGTTGAATATGGTGATAGCCTTAATCTTCTAATTGTCGATGAAACTTCGACTGATCTTGCGGCTAGTGATGACAACGATGAAAATTCTACTCTCTCATGTTGTTCAATTGCTTGCAACTTAAGGCAAATCACTACCACTCTAGAATCCAACTTGTGCAACAAATCCAAGTTAAGTGTTCTAAAAACCTATGCAATTTATTTGGAGATTTCTGGCTTCGCCGACATGTTGGCATGTTTCAGCATTATGCTAGAAGCTATGAGAAGTGAGGAAAGTTTATCGAATTGTGGAGCGAAGAGAAAACTAAAGAAAAAATGCAAAGATTTTAGTACCGCTTTTGGTGAAGTATACAAAACACAAACAGGGTGGAGTGTACCTGATAAAGAACTTCGCGAAGATCTACAAATATCGGTTTCTCAAAAAGTGATTCCTGCTTACCGAAGTTATACCGGTAGAAACTCGTCTAACATTGATGAGAAGTGGATCAAGTATACGGTTTTTGTTGGTATGGAAGAACATAAACCTATGATCTCAGCTTGTGAAGAAGATCAAGACATGGTTGCTGCAGCTCAACACATTATAAAGGCACTAGCTTCAAGCAAAACTGTCTCTAATGAGTTGAGAAAAACTCTCTTGGATCTTGAGTTCCAATTGTGTTCAATCAATCAAAGAAAGGAAAGTTGCATCAAACAATTAGAGATAAAGCTTAAATGTGTTGAAGATAAGGTAATGAGTTTGGAGACAAATATTGGAATCATATCTTCTTCTGAGTATTTAAAAATTGTTGGTGAAATTCAAACCCTAACTCAAACTTTGCAACAAAAGTTTGATTCTGTGAATGGAAATTTGAAGCATAAGGAACTTGTTCAAAGAGCTAATGGAATTTTGCAAGTTGTTATGTCAAGGCTTGAGGATGAGTTGGTTCAAATTCTTGTTAATCATAAGCAATATTTTGAGCCTGATTATATGTCTTTTGATTCCAATAGAGTTGATATTGTGTATGATGGATCATTTGGTTCAATTGAGGATGAAAAAATCAACGATGCGTCGTGGAGCAGTGATGGTGGCCGATCCGAAGCGAGCAGTGCTATAGATTTGGTGCATCATTCTGTACTTGAAGATCTCAAAAGCATTGCTAAAGCTATGTTTGTTTCAAATTACCATCAGGAGTTTTGCCATATCTTCATCAGTTCTAGGAGAGAAGCCTTGGATGAGTACTTTCTCATTCTAGAAATCGAAAAACTAAGCATCGAAAATGTGCTTAAATTGGAGTGGCATTGTTTGAATCGCAAGATAAAGAAATGGATTTGGGCTATGAAGTTCATCGTTCATACGTATCTAGTTGGCGAGAAACAATTGTGTAAGCAGATTCTTGGAGACTTCGGATCCATTTATCAGCTTTGTTTCTCCAAAATATCTCGGAGTTCGGTATTGCGCCTTTTAAATTTTGGTGAGGCCGTAACAATGGGAGCACACACGCCCGAAAAACTGTTTTGTTTACTTGACATGTATGAGGTTTTGGAACTTCTAGCAGTGGATATAGATATTCTGTTCATTGAAGAAGTTGATTCTTTTGTTAGAGGAGAATTTCACAAACTTCTAAGAAGCTTTGGTGATAGTATAAAATCTACATTTCTTGCATTTAGAAATGCTATTGCAACAAATCCATCAAATAAATGTTTTCCTGGTGGAGGTGTTCACCATCTTACAAGATATGTCATGAATTACATCAAGGCACTTGTTGAATATGGTGATAGCCTTAATCTTCTAATTGTCGATGAAACTTCGACTGATCTTGCGGCTAGTGATGACAACGATGAAAATTCTACTCTCTCATGTTGTTCAATTGCTTGCAACTTAAGGCAAATCACTACCACTCTAGAATCCAACTTGTGCAACAAATCCAAGTTATACACTGATGTTGCTTTGCAACATATTTTCATGATGAATAACATTCATTACATGGTTCAAAAGGTTAAGTGTTCTAAAACCCTATGTAATTTCTTTGGAGATTTCTGGCTTCGCCAACATGTTGGAATGTTTCAGCATTATGCTAGAAGCTATGAGAAGGTGACTTGGAGTGCAGTACTTTCTGTGTTTAGTGAGGAAAGTTTATCGAATTGCGGAGCGAAGAGAAAACTAAAGAAAAAATGCAAAGATTTTAGTACTGCTTTTGGTGAAGTATACAAAACACAGACAGGGTGGAGTGTACCTGATAAAGAACTTCGCGAAGATCTACAAATATCGGTTTCTCAGAAAGTGATTCCTGCTTACCGAAGTTATACCGGTAGAAACTCGTCTAACATTGATGAGAAGTGGATTAAGTATACGGTCGATGATCTACAATGTTATATTTTGGATCTTTTTCATGATTCACCAAAATCTTTGCACCATTCTCAACATAGAAAGTGA
Protein sequence

>Msa0352000

MSLETNHEIISSSEYLKLVDEIQTLQQKFDSVNGNLKHKELVQRANEILQVVMSRLKDELVQILQYFEPDYMSFNSNRVDIVYDGSFGSIEDENINEVSRSSDGIQSEASSTIDLVQPSILEDLKSIANAMREALAEYFVILEIEKLSIENVLKMEWHCLNRRIKKWIWAMKVIVQTYLVSEKQLCKQILGDFGSVYQFCFSEISRGSVLELLAVDIDILFIEEVDSFVRGEFHKLLRSFGDTIKSTFLAFRNAIATNPSNKCFPGVHHLTRYVMNYIKALVEYGDSLNLLIVDETSTDLAASDDNDENSTLSCCSIACNLRQITTTLESNLCNKSKLSVLKTYAIYLEISGFADMLACFSIMLEAMRSEESLSNCGAKRKLKKKCKDFSTAFGEVYKTQTGWSVPDKELREDLQISVSQKVIPAYRSYTGRNSSNIDEKWIKYTVFVGMEEHKPMISACEEDQDMVAAAQHIIKALASSKTVSNELRKTLLDLEFQLCSINQRKESCIKQLEIKLKCVEDKVMSLETNIGIISSSEYLKIVGEIQTLTQTLQQKFDSVNGNLKHKELVQRANGILQVVMSRLEDELVQILVNHKQYFEPDYMSFDSNRVDIVYDGSFGSIEDEKINDASWSSDGGRSEASSAIDLVHHSVLEDLKSIAKAMFVSNYHQEFCHIFISSRREALDEYFLILEIEKLSIENVLKLEWHCLNRKIKKWIWAMKFIVHTYLVGEKQLCKQILGDFGSIYQLCFSKISRSSVLRLLNFGEAVTMGAHTPEKLFCLLDMYEVLELLAVDIDILFIEEVDSFVRGEFHKLLRSFGDSIKSTFLAFRNAIATNPSNKCFPGGGVHHLTRYVMNYIKALVEYGDSLNLLIVDETSTDLAASDDNDENSTLSCCSIACNLRQITTTLESNLCNKSKLYTDVALQHIFMMNNIHYMVQKVKCSKTLCNFFGDFWLRQHVGMFQHYARSYEKVTWSAVLSVFSEESLSNCGAKRKLKKKCKDFSTAFGEVYKTQTGWSVPDKELREDLQISVSQKVIPAYRSYTGRNSSNIDEKWIKYTVDDLQCYILDLFHDSPKSLHHSQHRK*