AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0329710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329710 MtrunA17_Chr2g0311631 81.935 310 52 1 1 306 55 364 0.0 525
Msa0329710 MtrunA17_Chr3g0093761 44.839 310 152 5 1 303 56 353 2.36e-89 270
Msa0329710 MtrunA17_Chr3g0093741 45.016 311 151 5 1 303 56 354 7.77e-89 269
Msa0329710 MtrunA17_Chr3g0093751 43.730 311 155 5 1 303 56 354 1.11e-87 266
Msa0329710 MtrunA17_Chr7g0265351 42.222 315 154 6 1 303 39 337 3.89e-82 251
Msa0329710 MtrunA17_Chr2g0311641 84.071 113 14 1 1 109 55 167 6.06e-63 196
Msa0329710 MtrunA17_Chr8g0348081 36.909 317 174 7 1 303 60 364 7.27e-59 192
Msa0329710 MtrunA17_Chr8g0336851 36.250 320 172 8 1 303 60 364 2.71e-57 188
Msa0329710 MtrunA17_Chr8g0336781 37.618 319 170 10 1 303 95 400 2.65e-56 187
Msa0329710 MtrunA17_Chr7g0225881 35.065 308 183 6 1 299 67 366 3.64e-56 186
Msa0329710 MtrunA17_Chr8g0345831 33.119 311 191 6 1 303 42 343 2.40e-55 182
Msa0329710 MtrunA17_Chr2g0311831 33.654 312 190 6 1 303 68 371 3.03e-55 183
Msa0329710 MtrunA17_Chr2g0311761 32.588 313 193 8 1 303 68 372 3.65e-55 183
Msa0329710 MtrunA17_Chr4g0045411 36.577 298 166 5 1 280 30 322 4.76e-55 182
Msa0329710 MtrunA17_Chr4g0066121 35.906 298 166 6 1 284 60 346 6.15e-55 182
Msa0329710 MtrunA17_Chr8g0336761 35.443 316 180 8 1 303 60 364 9.77e-55 182
Msa0329710 MtrunA17_Chr1g0184241 33.007 306 195 2 1 303 69 367 7.18e-54 179
Msa0329710 MtrunA17_Chr8g0336631 34.713 314 186 7 1 303 60 365 7.94e-54 179
Msa0329710 MtrunA17_Chr1g0179801 33.123 317 193 5 1 305 66 375 7.68e-53 177
Msa0329710 MtrunA17_Chr4g0045441 34.268 321 179 7 1 296 26 339 2.06e-52 175
Msa0329710 MtrunA17_Chr8g0336861 34.796 319 180 10 1 303 60 366 1.52e-51 173
Msa0329710 MtrunA17_Chr1g0162351 34.727 311 169 8 1 284 69 372 1.91e-51 174
Msa0329710 MtrunA17_Chr7g0265221 31.481 324 191 7 1 303 67 380 6.31e-51 172
Msa0329710 MtrunA17_Chr8g0336751 34.395 314 185 9 1 303 94 397 7.78e-51 172
Msa0329710 MtrunA17_Chr3g0109041 31.090 312 197 8 1 299 42 348 9.86e-51 171
Msa0329710 MtrunA17_Chr3g0128001 35.783 313 180 7 1 304 38 338 1.24e-50 170
Msa0329710 MtrunA17_Chr4g0006371 35.354 297 170 7 1 283 62 350 3.48e-50 170
Msa0329710 MtrunA17_Chr2g0296371 32.278 316 192 8 1 303 50 356 7.96e-50 169
Msa0329710 MtrunA17_Chr2g0311921 34.694 294 174 8 1 284 54 339 8.64e-50 169
Msa0329710 MtrunA17_Chr1g0162321 33.762 311 172 8 1 284 69 372 8.83e-50 169
Msa0329710 MtrunA17_Chr7g0266651 31.949 313 198 5 1 305 59 364 1.95e-49 168
Msa0329710 MtrunA17_Chr3g0126741 33.673 294 173 7 1 283 59 341 2.06e-49 168
Msa0329710 MtrunA17_Chr5g0412681 34.304 309 176 7 1 298 33 325 2.35e-48 164
Msa0329710 MtrunA17_Chr3g0113641 34.343 297 172 7 1 283 50 337 3.42e-48 164
Msa0329710 MtrunA17_Chr7g0242551 34.343 297 173 7 1 283 54 342 3.49e-48 164
Msa0329710 MtrunA17_Chr7g0239111 33.651 315 184 10 1 303 55 356 3.52e-48 164
Msa0329710 MtrunA17_Chr3g0125201 34.507 284 156 8 1 270 3 270 6.14e-48 162
Msa0329710 MtrunA17_Chr5g0437181 34.680 297 171 7 1 283 49 336 1.02e-47 163
Msa0329710 MtrunA17_Chr5g0412651 33.113 302 181 6 1 289 38 331 1.19e-47 163
Msa0329710 MtrunA17_Chr1g0161041 36.334 311 177 9 1 302 96 394 1.35e-47 164
Msa0329710 MtrunA17_Chr1g0167951 33.651 315 185 8 1 303 53 355 1.70e-47 162
Msa0329710 MtrunA17_Chr5g0412671 32.797 311 186 7 1 298 38 338 2.57e-47 162
Msa0329710 MtrunA17_Chr1g0167911 32.673 303 186 7 1 294 54 347 3.36e-47 162
Msa0329710 MtrunA17_Chr1g0161081 35.110 319 170 11 1 302 73 371 3.57e-47 162
Msa0329710 MtrunA17_Chr1g0162361 34.812 293 166 6 1 276 27 311 5.04e-47 161
Msa0329710 MtrunA17_Chr6g0472861 31.987 297 183 6 1 287 70 357 6.14e-47 162
Msa0329710 MtrunA17_Chr1g0167961 34.694 294 169 8 1 282 69 351 1.12e-46 161
Msa0329710 MtrunA17_Chr8g0354261 31.546 317 197 7 1 305 68 376 1.52e-46 160
Msa0329710 MtrunA17_Chr8g0375571 30.503 318 200 7 1 306 45 353 1.57e-46 160
Msa0329710 MtrunA17_Chr4g0045451 34.098 305 169 7 1 280 26 323 2.01e-46 160
Msa0329710 MtrunA17_Chr1g0161111 34.286 315 178 9 1 302 132 430 2.31e-46 161
Msa0329710 MtrunA17_Chr2g0311861 31.068 309 182 5 1 303 64 347 3.05e-46 159
Msa0329710 MtrunA17_Chr1g0187831 31.190 311 190 7 1 298 70 369 5.71e-46 159
Msa0329710 MtrunA17_Chr5g0424201 30.903 288 178 6 9 284 49 327 1.49e-45 157
Msa0329710 MtrunA17_Chr1g0187811 30.421 309 196 7 1 298 188 488 1.53e-45 160
Msa0329710 MtrunA17_Chr6g0455481 33.226 310 180 9 4 299 42 338 1.72e-45 157
Msa0329710 MtrunA17_Chr2g0311701 30.820 305 184 7 1 289 69 362 5.09e-45 157
Msa0329710 MtrunA17_Chr8g0354241 31.230 317 198 8 1 305 68 376 8.36e-45 156
Msa0329710 MtrunA17_Chr4g0045471 33.910 289 166 6 15 284 46 328 9.41e-45 155
Msa0329710 MtrunA17_Chr2g0311611 98.592 71 1 0 154 224 1 71 1.03e-44 146
Msa0329710 MtrunA17_Chr1g0184111 32.000 300 188 4 1 292 37 328 1.05e-44 155
Msa0329710 MtrunA17_Chr1g0184161 31.650 297 186 6 1 289 38 325 1.60e-44 154
Msa0329710 MtrunA17_Chr1g0187821 30.065 306 199 5 1 298 67 365 1.83e-44 155
Msa0329710 MtrunA17_Chr8g0371931 35.055 271 163 6 1 263 39 304 2.25e-44 155
Msa0329710 MtrunA17_Chr1g0184121 33.224 304 171 6 1 288 37 324 2.28e-44 154
Msa0329710 MtrunA17_Chr5g0420981 31.046 306 197 7 1 299 53 351 2.79e-44 154
Msa0329710 MtrunA17_Chr7g0239101 32.595 316 190 9 1 305 55 358 4.44e-44 154
Msa0329710 MtrunA17_Chr5g0420951 31.290 310 199 6 1 303 53 355 6.16e-44 153
Msa0329710 MtrunA17_Chr8g0365241 31.922 307 193 8 1 299 57 355 6.25e-44 153
Msa0329710 MtrunA17_Chr5g0423251 31.833 311 195 9 1 303 47 348 1.07e-43 152
Msa0329710 MtrunA17_Chr5g0423191 30.094 319 194 10 1 305 47 350 1.78e-43 152
Msa0329710 MtrunA17_Chr3g0102041 32.721 272 168 7 1 263 39 304 2.04e-43 152
Msa0329710 MtrunA17_Chr8g0375601 31.329 316 197 9 1 305 48 354 2.30e-43 152
Msa0329710 MtrunA17_Chr7g0239121 31.132 318 189 11 1 303 51 353 5.42e-43 151
Msa0329710 MtrunA17_Chr7g0239071 32.632 285 168 7 31 303 29 301 5.54e-43 150
Msa0329710 MtrunA17_Chr2g0314381 29.712 313 201 8 1 303 77 380 1.02e-42 150
Msa0329710 MtrunA17_Chr2g0311711 30.667 300 186 9 1 288 67 356 1.05e-42 150
Msa0329710 MtrunA17_Chr4g0045431 31.511 311 181 9 1 286 26 329 1.11e-42 150
Msa0329710 MtrunA17_Chr1g0167931 32.907 313 152 11 1 303 54 318 1.29e-42 149
Msa0329710 MtrunA17_Chr7g0239821 33.121 314 187 10 1 303 64 365 1.30e-42 150
Msa0329710 MtrunA17_Chr4g0055591 29.545 308 195 7 1 298 61 356 1.57e-42 150
Msa0329710 MtrunA17_Chr5g0426891 29.936 314 199 8 1 303 39 342 3.66e-42 148
Msa0329710 MtrunA17_Chr8g0375671 30.599 317 199 8 1 305 52 359 5.86e-42 148
Msa0329710 MtrunA17_Chr8g0371921 35.039 254 154 5 16 263 56 304 1.21e-41 147
Msa0329710 MtrunA17_Chr2g0314401 30.159 315 197 11 1 303 51 354 1.27e-41 147
Msa0329710 MtrunA17_Chr5g0421011 28.571 322 195 9 1 305 47 350 1.58e-41 147
Msa0329710 MtrunA17_Chr5g0421091 30.063 316 199 7 1 305 45 349 1.62e-41 147
Msa0329710 MtrunA17_Chr5g0424211 32.632 285 166 7 1 271 42 314 1.64e-41 146
Msa0329710 MtrunA17_Chr7g0235951 29.375 320 196 8 1 303 67 373 1.94e-41 147
Msa0329710 MtrunA17_Chr7g0250511 31.290 310 199 5 1 303 49 351 2.26e-41 146
Msa0329710 MtrunA17_Chr5g0421101 30.380 316 197 8 1 305 47 350 3.38e-41 146
Msa0329710 MtrunA17_Chr2g0314391 28.662 314 203 9 1 303 70 373 3.52e-41 146
Msa0329710 MtrunA17_Chr2g0285931 33.099 284 157 7 21 283 42 313 3.58e-41 145
Msa0329710 MtrunA17_Chr5g0423221 31.447 318 188 11 1 303 71 373 3.66e-41 146
Msa0329710 MtrunA17_Chr5g0420901 30.449 312 202 6 1 305 46 349 4.04e-41 146
Msa0329710 MtrunA17_Chr1g0184151 31.229 301 182 6 1 289 38 325 5.92e-41 145
Msa0329710 MtrunA17_Chr2g0311691 31.000 300 180 8 1 284 63 351 7.28e-41 145
Msa0329710 MtrunA17_Chr5g0423201 28.296 311 207 6 1 303 47 349 8.35e-41 145
Msa0329710 MtrunA17_Chr4g0064781 31.410 312 192 10 1 303 50 348 9.86e-41 145
Msa0329710 MtrunA17_Chr5g0420941 29.904 311 203 5 1 304 45 347 1.07e-40 145
Msa0329710 MtrunA17_Chr2g0311681 31.000 300 180 9 1 284 63 351 1.55e-40 145
Msa0329710 MtrunA17_Chr8g0358941 28.125 320 200 6 1 303 27 333 1.87e-40 144
Msa0329710 MtrunA17_Chr4g0050031 31.447 318 190 8 1 303 62 366 2.73e-40 144
Msa0329710 MtrunA17_Chr5g0398291 33.447 293 167 10 1 275 47 329 2.91e-40 144
Msa0329710 MtrunA17_Chr1g0191201 32.323 297 174 8 2 280 54 341 3.75e-40 144
Msa0329710 MtrunA17_Chr2g0313111 28.707 317 193 8 1 303 28 325 5.21e-40 142
Msa0329710 MtrunA17_Chr2g0311741 30.293 307 177 7 1 289 27 314 6.35e-40 142
Msa0329710 MtrunA17_Chr5g0439011 34.050 279 160 6 1 269 5 269 1.12e-39 141
Msa0329710 MtrunA17_Chr5g0405411 32.463 268 161 5 6 263 47 304 1.14e-39 142
Msa0329710 MtrunA17_Chr1g0184101 31.000 300 182 7 1 288 38 324 1.17e-39 142
Msa0329710 MtrunA17_Chr5g0421041 29.936 314 201 10 1 305 45 348 2.64e-39 141
Msa0329710 MtrunA17_Chr2g0289341 30.263 304 193 8 1 296 4 296 2.65e-39 140
Msa0329710 MtrunA17_Chr1g0204181 33.333 285 159 5 13 280 77 347 4.90e-39 141
Msa0329710 MtrunA17_Chr8g0375681 30.496 282 174 7 33 303 15 285 1.20e-38 138
Msa0329710 MtrunA17_Chr6g0474391 32.632 285 161 5 13 280 82 352 2.72e-38 139
Msa0329710 MtrunA17_Chr3g0130391 31.525 295 179 5 2 280 67 354 2.76e-38 139
Msa0329710 MtrunA17_Chr8g0375701 31.208 298 180 9 18 303 71 355 7.13e-38 137
Msa0329710 MtrunA17_Chr2g0332191 30.667 300 175 8 1 284 52 334 9.09e-38 137
Msa0329710 MtrunA17_Chr3g0121141 31.058 293 181 9 1 285 4 283 1.08e-37 135
Msa0329710 MtrunA17_Chr8g0351101 31.348 319 187 6 1 299 54 360 2.85e-37 136
Msa0329710 MtrunA17_Chr8g0364471 28.662 314 196 9 1 298 67 368 4.01e-37 135
Msa0329710 MtrunA17_Chr4g0045461 30.592 304 180 6 1 280 26 322 5.68e-37 135
Msa0329710 MtrunA17_Chr5g0423211 28.972 321 199 11 1 306 47 353 1.00e-36 134
Msa0329710 MtrunA17_Chr7g0236011 30.818 318 186 11 1 299 67 369 3.05e-36 133
Msa0329710 MtrunA17_Chr4g0052251 30.693 303 172 8 1 283 29 313 4.10e-35 129
Msa0329710 MtrunA17_Chr8g0370711 28.981 314 201 10 1 303 52 354 4.25e-35 130
Msa0329710 MtrunA17_Chr2g0311621 93.651 63 4 0 1 63 55 117 5.47e-35 123
Msa0329710 MtrunA17_Chr7g0235981 29.964 277 177 6 36 303 59 327 5.98e-35 129
Msa0329710 MtrunA17_Chr3g0125421 30.104 289 160 7 21 285 59 329 7.33e-35 129
Msa0329710 MtrunA17_Chr8g0336801 40.132 152 81 3 155 303 12 156 1.08e-34 123
Msa0329710 MtrunA17_Chr3g0126761 37.222 180 103 3 107 284 42 213 1.53e-34 125
Msa0329710 MtrunA17_Chr1g0162191 28.713 303 201 8 1 295 47 342 1.80e-34 128
Msa0329710 MtrunA17_Chr3g0087031 29.630 297 192 9 1 289 60 347 2.14e-34 128
Msa0329710 MtrunA17_Chr7g0220011 29.054 296 186 8 4 287 39 322 3.40e-34 127
Msa0329710 MtrunA17_Chr7g0232161 34.118 255 143 10 1 243 60 301 3.80e-34 127
Msa0329710 MtrunA17_Chr5g0420721 30.290 241 152 7 72 305 21 252 4.85e-34 125
Msa0329710 MtrunA17_Chr7g0239091 27.974 311 199 6 1 304 160 452 5.18e-34 129
Msa0329710 MtrunA17_Chr7g0220001 29.293 297 189 7 1 288 41 325 8.45e-34 126
Msa0329710 MtrunA17_Chr8g0370721 26.814 317 204 9 1 303 52 354 1.14e-33 126
Msa0329710 MtrunA17_Chr3g0092531 31.419 296 176 7 1 283 6 287 1.29e-33 125
Msa0329710 MtrunA17_Chr7g0247991 30.769 299 187 8 1 287 67 357 1.91e-33 126
Msa0329710 MtrunA17_Chr8g0335411 30.124 322 191 10 1 303 67 373 5.57e-33 124
Msa0329710 MtrunA17_Chr3g0114861 32.542 295 174 9 1 283 40 321 6.07e-33 124
Msa0329710 MtrunA17_Chr2g0319491 28.621 290 189 6 1 282 33 312 8.86e-33 123
Msa0329710 MtrunA17_Chr3g0145171 28.435 313 204 8 1 303 52 354 9.31e-33 124
Msa0329710 MtrunA17_Chr4g0068891 29.139 302 175 8 1 283 20 301 6.74e-32 120
Msa0329710 MtrunA17_Chr1g0148771 28.276 290 187 7 1 284 63 337 1.11e-31 121
Msa0329710 MtrunA17_Chr5g0420881 37.908 153 87 2 154 305 1 146 8.79e-31 113
Msa0329710 MtrunA17_Chr3g0145181 28.309 272 173 9 24 284 75 335 1.61e-30 117
Msa0329710 MtrunA17_Chr1g0194321 27.184 309 184 9 1 283 20 313 2.63e-30 117
Msa0329710 MtrunA17_Chr4g0066991 27.036 307 190 7 1 298 67 348 6.12e-30 116
Msa0329710 MtrunA17_Chr8g0384481 28.956 297 187 7 1 282 59 346 1.08e-29 116
Msa0329710 MtrunA17_Chr3g0145201 27.660 282 179 9 15 285 701 968 1.67e-29 118
Msa0329710 MtrunA17_Chr4g0011311 27.948 229 153 4 1 224 67 288 8.75e-29 112
Msa0329710 MtrunA17_Chr6g0488511 27.987 318 190 11 1 303 3 296 2.93e-27 108
Msa0329710 MtrunA17_Chr4g0075471 36.686 169 93 5 124 289 3 160 4.17e-27 103
Msa0329710 MtrunA17_Chr3g0114871 31.356 236 138 7 1 224 42 265 5.85e-27 106
Msa0329710 MtrunA17_Chr8g0384461 27.483 302 192 11 1 285 47 338 1.70e-26 107
Msa0329710 MtrunA17_Chr7g0247741 28.333 300 192 8 22 306 29 320 3.28e-26 105
Msa0329710 MtrunA17_Chr2g0314371 26.148 283 166 11 1 251 52 323 4.44e-26 105
Msa0329710 MtrunA17_Chr8g0336871 35.000 180 93 6 126 298 7 169 1.55e-25 100
Msa0329710 MtrunA17_Chr5g0394071 36.364 165 96 2 120 282 13 170 1.72e-25 100
Msa0329710 MtrunA17_Chr8g0362741 28.643 199 131 4 29 224 83 273 1.20e-24 100
Msa0329710 MtrunA17_Chr1g0170631 32.843 204 122 7 107 305 1 194 1.21e-24 98.6
Msa0329710 MtrunA17_Chr6g0486831 29.167 312 192 12 4 292 24 329 1.37e-24 101
Msa0329710 MtrunA17_Chr4g0053251 28.097 331 182 11 1 290 8 323 1.43e-23 98.6
Msa0329710 MtrunA17_Chr8g0348951 28.289 304 188 8 21 305 27 319 1.49e-23 98.2
Msa0329710 MtrunA17_Chr4g0064771 32.039 206 111 7 109 295 10 205 4.54e-23 94.7
Msa0329710 MtrunA17_Chr7g0233661 36.424 151 87 2 134 282 1 144 6.55e-23 92.8
Msa0329710 MtrunA17_Chr8g0389941 25.159 314 200 9 4 292 37 340 2.21e-22 95.5
Msa0329710 MtrunA17_Chr3g0092581 36.986 146 77 4 139 283 28 159 2.49e-22 92.0
Msa0329710 MtrunA17_Chr3g0105281 29.588 267 157 12 1 254 34 282 5.40e-22 94.0
Msa0329710 MtrunA17_Chr4g0037611 33.533 167 97 5 121 282 3 160 1.67e-21 89.7
Msa0329710 MtrunA17_Chr8g0336831 33.871 186 112 7 1 177 60 243 4.72e-21 90.1
Msa0329710 MtrunA17_Chr2g0293931 29.808 208 111 8 92 281 1 191 3.94e-19 84.0
Msa0329710 MtrunA17_Chr8g0364171 35.385 130 77 2 95 224 4 126 5.77e-19 81.6
Msa0329710 MtrunA17_Chr4g0004071 26.298 289 176 8 1 270 9 279 9.54e-19 84.7
Msa0329710 MtrunA17_Chr1g0161101 42.857 112 46 4 155 264 407 502 1.65e-18 85.5
Msa0329710 MtrunA17_Chr4g0055911 25.079 315 210 11 1 298 9 314 2.38e-17 80.9
Msa0329710 MtrunA17_Chr4g0055871 23.824 319 210 9 1 301 9 312 4.33e-16 77.4
Msa0329710 MtrunA17_Chr4g0004061 25.965 285 183 6 1 270 9 280 4.77e-16 77.4
Msa0329710 MtrunA17_Chr5g0407731 27.119 295 181 12 1 283 33 305 2.99e-15 75.1
Msa0329710 MtrunA17_Chr5g0407781 24.916 297 185 9 1 283 5 277 3.16e-15 74.7
Msa0329710 MtrunA17_Chr1g0167921 44.928 69 31 1 155 223 95 156 2.22e-14 70.1
Msa0329710 MtrunA17_Chr2g0319521 33.010 103 62 1 122 224 29 124 3.94e-14 68.6
Msa0329710 MtrunA17_Chr8g0375581 36.000 75 40 2 147 220 18 85 1.04e-13 65.9
Msa0329710 MtrunA17_Chr1g0158011 28.736 174 111 4 114 282 75 240 7.91e-13 67.4
Msa0329710 MtrunA17_Chr4g0009561 30.075 133 86 2 172 303 192 318 8.82e-13 67.8
Msa0329710 MtrunA17_Chr3g0138351 25.939 293 183 10 11 285 23 299 6.00e-12 65.5
Msa0329710 MtrunA17_Chr8g0336791 34.400 125 73 5 1 117 60 183 1.41e-11 62.4
Msa0329710 MtrunA17_Chr1g0148781 22.884 319 215 10 1 298 8 316 8.24e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329710 AT3G12900.1 57.566 304 119 2 3 302 58 355 1.80e-132 380
Msa0329710 AT3G13610.1 46.753 308 151 4 1 303 62 361 7.58e-103 305
Msa0329710 AT1G55290.1 44.481 308 158 4 1 303 62 361 4.07e-97 291
Msa0329710 AT5G12270.1 41.479 311 167 8 1 303 56 359 9.94e-71 223
Msa0329710 AT4G10500.1 36.334 311 180 6 1 302 44 345 3.11e-57 188
Msa0329710 AT4G10490.1 32.911 316 193 6 1 306 42 348 1.20e-54 181
Msa0329710 AT2G36690.2 34.295 312 189 6 1 304 61 364 4.30e-53 178
Msa0329710 AT2G36690.1 34.295 312 189 6 1 304 61 364 4.30e-53 178
Msa0329710 AT3G55970.1 36.789 299 164 9 1 283 52 341 6.12e-53 177
Msa0329710 AT2G30830.1 34.237 295 181 6 15 303 71 358 1.35e-51 174
Msa0329710 AT1G06640.1 34.951 309 182 9 1 298 64 364 1.73e-51 174
Msa0329710 AT5G43450.1 33.115 305 189 6 1 298 61 357 2.51e-51 173
Msa0329710 AT5G59530.1 33.228 316 189 9 1 303 58 364 2.57e-50 171
Msa0329710 AT2G30840.1 34.354 294 177 9 15 300 75 360 4.83e-50 170
Msa0329710 AT5G59540.1 32.381 315 192 9 1 303 61 366 1.24e-49 169
Msa0329710 AT1G06650.2 34.603 315 185 10 1 303 64 369 2.15e-49 168
Msa0329710 AT5G43440.1 34.505 313 186 10 1 303 62 365 2.45e-49 168
Msa0329710 AT1G03410.2 34.437 302 171 7 1 287 57 346 4.09e-48 165
Msa0329710 AT1G77330.1 32.667 300 172 7 1 285 3 287 4.35e-48 163
Msa0329710 AT1G03410.1 34.437 302 171 7 1 287 94 383 7.47e-48 165
Msa0329710 AT1G04350.1 33.333 312 190 10 1 303 58 360 1.04e-47 164
Msa0329710 AT3G19010.1 32.399 321 186 6 1 303 28 335 3.61e-47 162
Msa0329710 AT3G19010.4 32.399 321 186 6 1 303 28 335 3.61e-47 162
Msa0329710 AT1G06645.1 35.333 300 173 11 13 303 92 379 3.86e-47 162
Msa0329710 AT1G06620.1 31.833 311 197 6 1 303 62 365 4.59e-46 159
Msa0329710 AT1G04380.1 33.119 311 190 9 1 303 45 345 5.12e-46 159
Msa0329710 AT2G30840.3 34.014 294 172 10 15 300 75 354 5.95e-46 159
Msa0329710 AT3G61400.1 34.722 288 162 9 14 287 80 355 8.26e-45 156
Msa0329710 AT3G21420.1 33.121 314 193 8 1 303 55 362 1.21e-44 155
Msa0329710 AT3G19000.1 34.539 304 171 7 1 283 32 328 1.62e-44 155
Msa0329710 AT3G11180.2 35.484 279 157 8 1 267 95 362 2.48e-44 156
Msa0329710 AT5G05600.1 34.007 297 173 7 1 283 62 349 3.06e-44 155
Msa0329710 AT3G11180.1 35.484 279 157 8 1 267 95 362 3.16e-44 155
Msa0329710 AT5G08640.2 32.192 292 181 6 2 283 41 325 9.11e-44 152
Msa0329710 AT5G08640.1 32.192 292 181 6 2 283 41 325 9.11e-44 152
Msa0329710 AT3G51240.1 35.018 277 155 9 1 263 38 303 1.26e-43 153
Msa0329710 AT2G25450.1 32.166 314 193 9 1 303 55 359 1.52e-43 152
Msa0329710 AT2G38240.1 33.333 312 183 9 1 299 48 347 1.54e-43 152
Msa0329710 AT1G17010.1 29.299 314 202 9 1 303 54 358 1.62e-43 152
Msa0329710 AT4G25300.1 30.312 320 191 9 1 303 52 356 3.71e-43 152
Msa0329710 AT1G15550.1 31.186 295 179 7 1 284 57 338 4.79e-43 151
Msa0329710 AT1G17020.1 28.438 320 198 9 1 303 53 358 4.95e-43 151
Msa0329710 AT1G03400.1 32.558 301 171 8 17 304 66 347 1.04e-42 150
Msa0329710 AT3G19010.3 32.899 307 173 7 1 303 28 305 1.53e-42 149
Msa0329710 AT5G24530.1 33.443 305 171 9 1 285 38 330 7.30e-42 148
Msa0329710 AT1G78550.1 29.206 315 200 9 1 303 53 356 9.95e-42 148
Msa0329710 AT4G16330.2 29.487 312 189 11 1 299 67 360 1.41e-41 147
Msa0329710 AT1G78440.1 30.556 324 183 10 1 302 18 321 1.19e-40 144
Msa0329710 AT1G30040.1 32.971 276 166 5 20 283 44 312 3.87e-40 143
Msa0329710 AT3G60290.1 30.945 307 196 8 1 299 52 350 4.61e-40 144
Msa0329710 AT4G22880.1 29.487 312 190 9 1 293 47 347 6.59e-40 143
Msa0329710 AT4G22880.2 29.487 312 190 9 1 293 47 347 6.59e-40 143
Msa0329710 AT4G22880.3 29.487 312 190 9 1 293 47 347 6.59e-40 143
Msa0329710 AT1G62380.1 32.441 299 176 9 1 289 7 289 6.60e-40 142
Msa0329710 AT5G43450.2 35.683 227 134 4 1 223 61 279 2.82e-39 139
Msa0329710 AT4G25420.1 33.453 278 165 4 21 285 83 353 4.28e-39 141
Msa0329710 AT1G78550.2 29.474 285 179 8 30 303 5 278 6.12e-39 139
Msa0329710 AT1G12010.1 31.373 306 184 9 1 296 7 296 7.77e-39 139
Msa0329710 AT2G44800.1 29.936 314 204 7 1 306 52 357 9.74e-39 140
Msa0329710 AT1G80330.1 30.435 299 180 7 1 284 49 334 1.03e-38 140
Msa0329710 AT5G20400.1 29.618 314 200 9 1 303 45 348 1.35e-38 139
Msa0329710 AT3G55970.2 35.833 240 129 9 1 224 52 282 1.40e-38 138
Msa0329710 AT1G60980.1 31.834 289 168 5 13 285 75 350 2.30e-38 139
Msa0329710 AT1G05010.1 32.781 302 168 10 1 284 4 288 1.14e-37 136
Msa0329710 AT4G25310.1 30.132 302 177 9 18 303 70 353 1.19e-37 137
Msa0329710 AT5G51810.1 30.592 304 177 6 1 285 63 351 1.29e-37 137
Msa0329710 AT1G03400.2 29.787 329 171 8 17 304 66 375 4.54e-37 136
Msa0329710 AT1G06640.2 34.177 237 141 6 1 230 64 292 8.10e-37 134
Msa0329710 AT5G43440.2 36.910 233 131 8 1 226 62 285 8.51e-37 133
Msa0329710 AT2G34555.1 31.419 296 175 8 1 283 27 307 1.18e-36 134
Msa0329710 AT5G07200.1 31.724 290 157 6 21 285 81 354 3.58e-36 134
Msa0329710 AT3G19000.2 33.597 253 140 7 1 232 32 277 4.52e-36 131
Msa0329710 AT4G21200.1 33.077 260 157 6 1 254 42 290 4.70e-36 132
Msa0329710 AT1G80340.1 30.272 294 183 7 1 284 50 331 5.13e-36 132
Msa0329710 AT5G63590.1 30.405 296 181 9 1 283 14 297 9.93e-36 131
Msa0329710 AT3G51240.2 35.111 225 125 7 50 263 5 219 1.12e-35 130
Msa0329710 AT5G59540.2 33.476 233 137 7 1 224 61 284 1.18e-35 130
Msa0329710 AT1G06640.3 34.361 227 134 6 1 220 64 282 5.57e-35 128
Msa0329710 AT1G06620.2 34.061 229 139 4 1 224 62 283 6.77e-35 128
Msa0329710 AT4G16330.1 31.390 223 134 6 83 299 45 254 8.34e-35 127
Msa0329710 AT5G63600.1 29.000 300 187 7 1 290 33 316 1.41e-34 128
Msa0329710 AT5G07480.1 30.464 302 183 11 1 285 44 335 2.50e-34 128
Msa0329710 AT1G04380.2 35.065 231 135 6 1 226 45 265 2.87e-34 126
Msa0329710 AT2G30840.2 35.065 231 134 6 1 223 57 279 4.93e-34 126
Msa0329710 AT1G06650.1 33.478 230 138 6 1 223 64 285 6.48e-34 126
Msa0329710 AT5G63600.2 29.236 301 186 8 1 290 33 317 8.72e-34 126
Msa0329710 AT4G25300.2 32.394 213 125 5 102 303 58 262 1.48e-33 124
Msa0329710 AT3G61400.2 35.747 221 120 5 14 224 80 288 3.96e-33 124
Msa0329710 AT2G19590.1 30.375 293 175 10 1 284 11 283 6.11e-33 124
Msa0329710 AT1G49390.1 28.931 318 197 10 1 303 45 348 9.47e-33 124
Msa0329710 AT4G21690.1 28.523 298 187 9 3 284 46 333 3.37e-32 122
Msa0329710 AT1G44090.1 31.000 300 176 11 1 280 63 351 1.24e-31 122
Msa0329710 AT3G19010.2 32.099 243 142 5 1 225 28 265 2.44e-31 119
Msa0329710 AT5G43935.1 27.551 294 174 8 1 284 19 283 4.52e-31 118
Msa0329710 AT1G47990.1 31.438 299 175 10 1 283 15 299 2.06e-30 117
Msa0329710 AT5G05600.2 32.353 238 138 7 1 224 62 290 8.30e-30 115
Msa0329710 AT1G50960.1 30.584 291 174 11 1 277 40 316 8.96e-30 115
Msa0329710 AT1G49390.2 27.857 280 181 8 34 303 1 269 4.37e-29 112
Msa0329710 AT1G02400.1 27.815 302 183 9 1 283 24 309 1.22e-28 112
Msa0329710 AT5G20550.1 28.239 301 186 11 1 285 45 331 1.59e-28 112
Msa0329710 AT5G54000.2 27.586 290 189 8 24 303 71 349 5.80e-28 111
Msa0329710 AT3G46490.1 27.653 311 197 9 4 292 20 324 1.93e-27 109
Msa0329710 AT5G63595.1 29.084 251 148 6 1 247 25 249 1.96e-27 108
Msa0329710 AT2G19590.2 30.798 263 153 10 31 284 26 268 3.75e-27 108
Msa0329710 AT4G25420.2 34.101 217 123 4 21 224 83 292 3.43e-26 105
Msa0329710 AT5G51810.2 31.020 245 137 5 1 227 63 293 6.15e-26 104
Msa0329710 AT5G54000.1 26.786 280 184 8 34 303 1 269 9.34e-26 103
Msa0329710 AT3G49620.1 28.479 309 180 11 1 278 34 332 1.53e-25 104
Msa0329710 AT4G25310.2 27.797 295 165 9 18 303 70 325 2.32e-24 100
Msa0329710 AT3G49630.3 29.391 279 146 11 16 263 30 288 9.18e-24 99.4
Msa0329710 AT3G49630.1 29.225 284 140 10 16 263 34 292 9.43e-24 99.4
Msa0329710 AT1G30040.2 31.797 217 129 5 20 224 44 253 3.00e-23 97.1
Msa0329710 AT1G35190.1 27.152 302 185 8 18 292 26 319 6.10e-23 97.1
Msa0329710 AT3G50210.4 27.759 299 170 10 1 263 8 296 2.01e-22 95.9
Msa0329710 AT3G50210.1 27.759 299 170 10 1 263 8 296 2.01e-22 95.9
Msa0329710 AT3G50210.3 27.759 299 170 10 1 263 8 296 2.01e-22 95.9
Msa0329710 AT1G35190.2 27.835 291 174 9 18 292 26 296 3.40e-22 94.7
Msa0329710 AT3G46490.2 27.574 272 169 9 4 253 20 285 8.10e-22 94.0
Msa0329710 AT5G07480.2 28.340 247 154 9 70 303 9 245 3.48e-21 90.9
Msa0329710 AT3G46500.5 27.303 304 200 11 4 292 20 317 4.94e-21 92.0
Msa0329710 AT5G63580.2 32.365 241 127 8 1 224 19 240 1.82e-20 88.6
Msa0329710 AT4G23340.1 27.875 287 178 10 24 295 30 302 1.98e-20 90.1
Msa0329710 AT5G63580.1 32.000 250 133 10 1 233 19 248 3.00e-20 88.2
Msa0329710 AT5G51310.1 27.463 335 193 11 1 303 5 321 1.30e-19 87.8
Msa0329710 AT3G46500.7 27.778 270 174 11 1 255 17 280 1.75e-18 84.3
Msa0329710 AT4G23340.2 29.381 194 119 5 109 295 2 184 2.03e-18 82.4
Msa0329710 AT1G14120.2 26.838 272 172 10 1 262 8 262 3.83e-18 83.6
Msa0329710 AT1G14120.1 26.838 272 172 10 1 262 8 262 3.83e-18 83.6
Msa0329710 AT1G14120.3 26.838 272 172 10 1 262 8 262 3.83e-18 83.6
Msa0329710 AT3G46480.1 36.000 125 77 2 168 292 156 277 7.14e-18 82.4
Msa0329710 AT1G14130.1 29.779 272 164 12 1 262 9 263 3.84e-17 80.5
Msa0329710 AT3G50210.2 33.136 169 93 4 105 263 56 214 1.16e-16 78.6
Msa0329710 AT1G52820.1 26.056 284 183 9 1 270 12 282 1.24e-16 79.3
Msa0329710 AT3G49630.2 32.738 168 90 6 105 263 66 219 6.01e-16 76.6
Msa0329710 AT3G46500.10 28.505 214 140 6 89 292 33 243 7.14e-16 76.3
Msa0329710 AT3G46500.1 28.505 214 140 6 89 292 33 243 7.14e-16 76.3
Msa0329710 AT3G46500.4 29.121 182 123 4 114 292 3 181 7.19e-16 74.7
Msa0329710 AT1G02400.2 26.639 244 145 8 1 226 24 251 1.39e-15 75.5
Msa0329710 AT5G58660.1 25.000 288 166 11 1 254 34 305 4.25e-15 75.1
Msa0329710 AT4G16765.5 34.146 123 78 2 166 288 75 194 6.79e-15 72.4
Msa0329710 AT3G47190.1 24.460 278 165 10 1 254 32 288 1.63e-14 73.6
Msa0329710 AT4G16765.6 34.146 123 78 2 166 288 121 240 2.02e-14 72.0
Msa0329710 AT4G16765.1 34.146 123 78 2 166 288 121 240 2.02e-14 72.0
Msa0329710 AT4G16765.2 34.146 123 78 2 166 288 121 240 2.02e-14 72.0
Msa0329710 AT4G03070.1 25.743 303 197 9 1 287 14 304 4.69e-14 72.0
Msa0329710 AT4G16765.3 40.659 91 51 2 166 256 121 208 1.38e-13 69.3
Msa0329710 AT3G46500.3 29.944 177 111 6 89 255 33 206 1.41e-13 69.3
Msa0329710 AT3G46500.6 31.034 145 94 4 114 255 34 175 5.21e-13 67.0
Msa0329710 AT3G46500.8 31.034 145 94 4 114 255 34 175 5.21e-13 67.0
Msa0329710 AT1G15540.1 25.325 308 187 11 1 279 9 302 6.08e-13 68.6
Msa0329710 AT1G15540.4 25.325 308 187 11 1 279 9 302 6.08e-13 68.6
Msa0329710 AT1G15540.3 25.325 308 187 11 1 279 16 309 7.34e-13 68.6
Msa0329710 AT1G15540.2 25.325 308 187 11 1 279 12 305 7.49e-13 68.6
Msa0329710 AT1G52800.1 27.368 285 171 12 1 267 10 276 3.49e-12 66.2
Msa0329710 AT4G22870.1 28.723 94 66 1 201 293 10 103 8.91e-11 58.9

Find 76 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTTCCTTTAGATTTAA+TGG 0.153451 2_4:+43572578 Msa0329710:CDS
CCATCTTTCTTCACCAATTC+TGG 0.189153 2_4:-43576238 None:intergenic
ATGGGTTGTATGTATATCTT+TGG 0.249136 2_4:-43572412 None:intergenic
GATTATGTAGACAACTTCTT+TGG 0.251304 2_4:+43576292 Msa0329710:CDS
CGAGATGGGAATGGAGTTAA+AGG 0.299667 2_4:+43572361 Msa0329710:five_prime_UTR
AAAAGTTTAAAGATGAGATA+TGG 0.312204 2_4:+43572666 Msa0329710:CDS
GTTAAAGGCTTGGTAGATTC+AGG 0.314420 2_4:+43572376 Msa0329710:five_prime_UTR
ATGAAGATGCTCTTCAATAT+TGG 0.337615 2_4:+43572760 Msa0329710:CDS
ATTATGTAGACAACTTCTTT+GGG 0.345467 2_4:+43576293 Msa0329710:CDS
CTGGAAATTCCACCAATTCC+TGG 0.355964 2_4:+43574477 Msa0329710:CDS
CCGCAAACAACTTTCTTCTC+TGG 0.366427 2_4:-43572642 None:intergenic
CCCACAGTAAGATCTGGATT+TGG 0.375047 2_4:-43574345 None:intergenic
ATCAAATTTGTAAGATGAAA+AGG 0.379223 2_4:-43572250 None:intergenic
GAAATATTAATTGGTAAGCT+AGG 0.382920 2_4:+43574246 Msa0329710:CDS
TTCAGCTTTGATAAGTCAAT+TGG 0.383199 2_4:-43572477 None:intergenic
CAATGTTGGTGATGCTCTAC+AGG 0.387509 2_4:+43574512 Msa0329710:CDS
GATTGGCCCGTTACCAGAAT+TGG 0.402403 2_4:+43576225 Msa0329710:CDS
ATGACTAAAGCTCCAGGAAT+TGG 0.413667 2_4:-43574489 None:intergenic
CCACAGTAAGATCTGGATTT+GGG 0.418332 2_4:-43574344 None:intergenic
AGATCTGGATTTGGGCATGC+TGG 0.426908 2_4:-43574336 None:intergenic
CCAGAATTGGTGAAGAAAGA+TGG 0.433407 2_4:+43576238 Msa0329710:CDS
AGGACTTACTTGCACACATT+AGG 0.435005 2_4:-43572783 None:intergenic
TCTTCACCAATTCTGGTAAC+GGG 0.438747 2_4:-43576231 None:intergenic
GTTAGAGCAGCTGAAACTCT+TGG 0.442981 2_4:+43572534 Msa0329710:CDS
AGTGACTCCATTAAATCTAA+AGG 0.443276 2_4:-43572585 None:intergenic
AAAGTTTAAAGATGAGATAT+GGG 0.448781 2_4:+43572667 Msa0329710:CDS
ATGGAAAGACTATATCGTTA+TGG 0.461316 2_4:+43572725 Msa0329710:CDS
CCAGATCTTACTGTGGGTGC+AGG 0.463667 2_4:+43574351 Msa0329710:CDS
TCCCGAGAAAGAAAATGTTC+TGG 0.471707 2_4:+43572701 Msa0329710:CDS
GAACACAATGATTCACTACT+TGG 0.475517 2_4:-43572563 None:intergenic
CCAGAGAAGAAAGTTGTTTG+CGG 0.476958 2_4:+43572642 Msa0329710:CDS
TGACACTGCCATCACTTAGT+AGG 0.480031 2_4:-43572198 None:intergenic
TTCTTCACCAATTCTGGTAA+CGG 0.482565 2_4:-43576232 None:intergenic
CTGCTTCAAGATGGAGTTGG+TGG 0.486453 2_4:+43574405 Msa0329710:CDS
AGCTTTGATAAGTCAATTGG+TGG 0.497967 2_4:-43572474 None:intergenic
AGAAAGAAAATGTTCTGGAA+TGG 0.511521 2_4:+43572706 Msa0329710:CDS
TACAACTTTGCTGTACGAGA+TGG 0.512487 2_4:+43572346 Msa0329710:five_prime_UTR
GATCTGGATTTGGGCATGCT+GGG 0.521590 2_4:-43574335 None:intergenic
GTAGAGGATGACAATGATGT+TGG 0.532520 2_4:+43574441 Msa0329710:CDS
ATTGACTTATCAAAGCTGAA+TGG 0.534320 2_4:+43572480 Msa0329710:CDS
CCTGCACCCACAGTAAGATC+TGG 0.539005 2_4:-43574351 None:intergenic
ATTATCTTGTGATTGTGTGT+TGG 0.539258 2_4:-43572279 None:intergenic
ACTAAAGCTCCAGGAATTGG+TGG 0.545240 2_4:-43574486 None:intergenic
TCTCTGTTTGACAACCAAAG+AGG 0.545713 2_4:+43576532 Msa0329710:three_prime_UTR
TGTAAGATGAAAAGGAGAGA+AGG 0.547343 2_4:-43572242 None:intergenic
ACAACTTTGCTGTACGAGAT+GGG 0.547707 2_4:+43572347 Msa0329710:five_prime_UTR
CCTATGCCAACAGAGATGAT+TGG 0.551257 2_4:+43576208 Msa0329710:CDS
TGGGAATGGAGTTAAAGGCT+TGG 0.552017 2_4:+43572366 Msa0329710:five_prime_UTR
CCAATCATCTCTGTTGGCAT+AGG 0.556190 2_4:-43576208 None:intergenic
TAATTTAAGGTACTAAGCAA+TGG 0.558277 2_4:+43576109 Msa0329710:intron
CAAACAACTTTCTTCTCTGG+TGG 0.558311 2_4:-43572639 None:intergenic
TGTTGGACAAGGAGAATGGC+TGG 0.559004 2_4:+43574458 Msa0329710:CDS
TAAAGATTGAATAATATATG+TGG 0.560331 2_4:+43576455 Msa0329710:three_prime_UTR
AACGGGCCAATCATCTCTGT+TGG 0.572721 2_4:-43576214 None:intergenic
ATTGGTGAAGAAAGATGGAT+TGG 0.576023 2_4:+43576243 Msa0329710:CDS
TTTGCTGTACGAGATGGGAA+TGG 0.580173 2_4:+43572352 Msa0329710:five_prime_UTR
ATGATGTTGGACAAGGAGAA+TGG 0.585749 2_4:+43574454 Msa0329710:CDS
TAGTCTTATTGGTTTGAAGA+CGG 0.585823 2_4:+43574296 Msa0329710:CDS
ATCACAGTGCTGCTTCAAGA+TGG 0.589742 2_4:+43574396 Msa0329710:CDS
TGATTCTTTATCGCAAGATG+AGG 0.591282 2_4:-43576390 None:intergenic
GGAGCTTTAGTCATCAATGT+TGG 0.594241 2_4:+43574498 Msa0329710:CDS
TTATGTAGACAACTTCTTTG+GGG 0.595548 2_4:+43576294 Msa0329710:CDS
AATTGATACTCTGGATTGAG+TGG 0.602801 2_4:-43576170 None:intergenic
TATGTAGACAACTTCTTTGG+GGG 0.603572 2_4:+43576295 Msa0329710:CDS
ATTAATTGGTAAGCTAGGAG+TGG 0.604027 2_4:+43574251 Msa0329710:CDS
CAGATCTTACTGTGGGTGCA+GGG 0.607660 2_4:+43574352 Msa0329710:CDS
ACATTGATGACTAAAGCTCC+AGG 0.611867 2_4:-43574495 None:intergenic
CTCTCGGTCCTACTAAGTGA+TGG 0.614253 2_4:+43572190 None:intergenic
GCAGGGCGACATACAGACAC+AGG 0.614647 2_4:+43574369 Msa0329710:CDS
TCAATTGGTGGCATATCACA+TGG 0.615151 2_4:-43572462 None:intergenic
TGGTTTGCATGTTAAAGTAG+AGG 0.618791 2_4:+43574425 Msa0329710:CDS
CCAAATCCAGATCTTACTGT+GGG 0.629025 2_4:+43574345 Msa0329710:CDS
GTGCTGCTTCAAGATGGAGT+TGG 0.650740 2_4:+43574402 Msa0329710:CDS
CCCAAATCCAGATCTTACTG+TGG 0.653231 2_4:+43574344 Msa0329710:CDS
CAGGGCGACATACAGACACA+GGG 0.659766 2_4:+43574370 Msa0329710:CDS
GATGACAATGATGTTGGACA+AGG 0.680297 2_4:+43574447 Msa0329710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAATATCTTAAATAAA+GGG - chr2_4:43574025-43574044 None:intergenic 10.0%
!! AAACAAAATATCTTAAATAA+AGG - chr2_4:43574026-43574045 None:intergenic 10.0%
!!! ATATAATAAATTAGTTTGTT+TGG + chr2_4:43574789-43574808 Msa0329710:intron 10.0%
!! AAAAATTGAATATAAAAAAG+TGG - chr2_4:43575046-43575065 None:intergenic 10.0%
!! AAAAATTGAATATAAAAAAG+TGG - chr2_4:43575046-43575065 None:intergenic 10.0%
!! AAATAAAAAATTATAAGTGA+AGG + chr2_4:43575218-43575237 Msa0329710:intron 10.0%
!! AATAAAAAATTATAAGTGAA+GGG + chr2_4:43575219-43575238 Msa0329710:intron 10.0%
!! TTTATAAAGAAATTTAATAG+GGG + chr2_4:43575262-43575281 Msa0329710:intron 10.0%
!! AATGATATACTTATTATTAT+AGG - chr2_4:43576018-43576037 None:intergenic 10.0%
!! TATTCTAATGATTAAAAGAA+AGG - chr2_4:43572806-43572825 None:intergenic 15.0%
!! AAAATCATAAATTACTACAA+AGG + chr2_4:43573129-43573148 Msa0329710:intron 15.0%
!!! AGATATTTTGTTTATAATTG+TGG + chr2_4:43574033-43574052 Msa0329710:intron 15.0%
!!! GACATTTTAGAAATATTAAT+TGG + chr2_4:43574237-43574256 Msa0329710:CDS 15.0%
!! ATAAAAAATTATAAGTGAAG+GGG + chr2_4:43575220-43575239 Msa0329710:intron 15.0%
!! TATGAAAAAAATATTCACTA+TGG - chr2_4:43575342-43575361 None:intergenic 15.0%
!!! AATATTTGTCATTTACAAAA+TGG - chr2_4:43575889-43575908 None:intergenic 15.0%
!! CTTAAATTAATATAGCAAAA+GGG - chr2_4:43576098-43576117 None:intergenic 15.0%
!! TAAAGATTGAATAATATATG+TGG + chr2_4:43576455-43576474 Msa0329710:three_prime_UTR 15.0%
!! ATCAAATTTGTAAGATGAAA+AGG - chr2_4:43572253-43572272 None:intergenic 20.0%
!!! TAGTTTGTTGATTCTTTTAT+GGG - chr2_4:43572433-43572452 None:intergenic 20.0%
!! AAAAGTTTAAAGATGAGATA+TGG + chr2_4:43572666-43572685 Msa0329710:CDS 20.0%
!! AAAGTTTAAAGATGAGATAT+GGG + chr2_4:43572667-43572686 Msa0329710:CDS 20.0%
!! CACATATTCCAAAAAATAAA+TGG - chr2_4:43572995-43573014 None:intergenic 20.0%
!!! TTTTTACTACAACTGTTATT+CGG - chr2_4:43573072-43573091 None:intergenic 20.0%
!! AATTACTACAAAGGAATTAT+CGG + chr2_4:43573138-43573157 Msa0329710:intron 20.0%
!! GTTTATGGTAAAATATCTAT+TGG - chr2_4:43573942-43573961 None:intergenic 20.0%
!! TAGCTTTCTCAATAAAATAA+TGG - chr2_4:43574122-43574141 None:intergenic 20.0%
!!! TCAAAAATTGATAGTCTTAT+TGG + chr2_4:43574285-43574304 Msa0329710:CDS 20.0%
!!! ATATTCTAAAAGATATTCCT+TGG - chr2_4:43574754-43574773 None:intergenic 20.0%
!! TGTTTGGATAATGTTAAAAT+TGG + chr2_4:43574805-43574824 Msa0329710:intron 20.0%
!!! TGTCAAAATTTAGCAATTTT+CGG + chr2_4:43574847-43574866 Msa0329710:intron 20.0%
!!! TCAAATTCATAGTTTTTAGA+TGG - chr2_4:43574876-43574895 None:intergenic 20.0%
!! TAAAAAATTATAAGTGAAGG+GGG + chr2_4:43575221-43575240 Msa0329710:intron 20.0%
!!! TGTTTAACATTGCATTTTTA+AGG - chr2_4:43575476-43575495 None:intergenic 20.0%
!!! TGCAAAATTGATAATAATCT+TGG + chr2_4:43575618-43575637 Msa0329710:intron 20.0%
!! TTTCTCATCATTTAAACTAT+AGG + chr2_4:43575715-43575734 Msa0329710:intron 20.0%
!!! TATATTGATGAATTTCCTTT+TGG - chr2_4:43575791-43575810 None:intergenic 20.0%
!! ACATATATAACACATTTGAT+GGG + chr2_4:43575976-43575995 Msa0329710:intron 20.0%
!! CCTTAAATTAATATAGCAAA+AGG - chr2_4:43576099-43576118 None:intergenic 20.0%
!!! CCTTTTGCTATATTAATTTA+AGG + chr2_4:43576096-43576115 Msa0329710:intron 20.0%
!!! TAAACTTTTAATTCATCTTG+TGG + chr2_4:43576432-43576451 Msa0329710:three_prime_UTR 20.0%
!! AAGATAATTGCACATTTTCA+TGG + chr2_4:43572294-43572313 Msa0329710:five_prime_UTR 25.0%
!!! GATTTTGAAGAGTTTAAAAC+TGG - chr2_4:43572322-43572341 None:intergenic 25.0%
!!! CTAGTTTGTTGATTCTTTTA+TGG - chr2_4:43572434-43572453 None:intergenic 25.0%
! TTGTGTTCCTTTAGATTTAA+TGG + chr2_4:43572578-43572597 Msa0329710:CDS 25.0%
!!! ATTCGCAACCATTTATTTTT+TGG + chr2_4:43572984-43573003 Msa0329710:intron 25.0%
! ACAGTTGTAGTAAAAAAAAG+TGG + chr2_4:43573076-43573095 Msa0329710:intron 25.0%
! ATTACTACAAAGGAATTATC+GGG + chr2_4:43573139-43573158 Msa0329710:intron 25.0%
! AGATTAAACACCTCAAAATA+TGG + chr2_4:43573307-43573326 Msa0329710:intron 25.0%
! AACTAGCAAGTGTTTATATA+AGG - chr2_4:43573821-43573840 None:intergenic 25.0%
!! TTATATAAACACTTGCTAGT+TGG + chr2_4:43573820-43573839 Msa0329710:intron 25.0%
!!! GCTTTTTGATTAAGTAAAGA+AGG - chr2_4:43574059-43574078 None:intergenic 25.0%
! AATCAAATATTTCCATTTGC+AGG + chr2_4:43574169-43574188 Msa0329710:intron 25.0%
! ATCAAATATTTCCATTTGCA+GGG + chr2_4:43574170-43574189 Msa0329710:intron 25.0%
! GAAATATTAATTGGTAAGCT+AGG + chr2_4:43574246-43574265 Msa0329710:CDS 25.0%
! TTCCGAAATATTAAAACACA+CGG - chr2_4:43574673-43574692 None:intergenic 25.0%
! ATTTGACATGTACACATATA+AGG - chr2_4:43574961-43574980 None:intergenic 25.0%
! TATATGTGTACATGTCAAAT+TGG + chr2_4:43574961-43574980 Msa0329710:intron 25.0%
! GAAAAAAATATTCACTATGG+TGG - chr2_4:43575339-43575358 None:intergenic 25.0%
! TAGAAATATTACCCATATAG+AGG - chr2_4:43575375-43575394 None:intergenic 25.0%
! TCTATATGGGTAATATTTCT+AGG + chr2_4:43575374-43575393 Msa0329710:intron 25.0%
!! GTTATGATTTTCTTGATTTC+AGG - chr2_4:43575412-43575431 None:intergenic 25.0%
!!! AAATTTGAGTTGGAATAGTT+GGG - chr2_4:43575553-43575572 None:intergenic 25.0%
!!! AAAATTTGAGTTGGAATAGT+TGG - chr2_4:43575554-43575573 None:intergenic 25.0%
! AGAGGATAAAAAATTTGAGT+TGG - chr2_4:43575563-43575582 None:intergenic 25.0%
! GATTCAAAGGAATTTCTTAT+GGG - chr2_4:43575596-43575615 None:intergenic 25.0%
! AGATTCAAAGGAATTTCTTA+TGG - chr2_4:43575597-43575616 None:intergenic 25.0%
!! TCAATTTTGCAAAGATTCAA+AGG - chr2_4:43575609-43575628 None:intergenic 25.0%
! ATAATAATCTTGGATTGTGA+GGG + chr2_4:43575628-43575647 Msa0329710:intron 25.0%
! ATTAATCACCATCAGATAAA+TGG + chr2_4:43575668-43575687 Msa0329710:intron 25.0%
!!! GAATTTCCTTTTGGTTTTTT+GGG - chr2_4:43575782-43575801 None:intergenic 25.0%
!!! TGAATTTCCTTTTGGTTTTT+TGG - chr2_4:43575783-43575802 None:intergenic 25.0%
! AAATTAAATTAGAGCGTGTT+AGG - chr2_4:43575866-43575885 None:intergenic 25.0%
! GACATATATAACACATTTGA+TGG + chr2_4:43575975-43575994 Msa0329710:intron 25.0%
! TAATATAGCAAAAGGGTTAT+TGG - chr2_4:43576091-43576110 None:intergenic 25.0%
!! TAATTTAAGGTACTAAGCAA+TGG + chr2_4:43576109-43576128 Msa0329710:intron 25.0%
! ATTATGTAGACAACTTCTTT+GGG + chr2_4:43576293-43576312 Msa0329710:CDS 25.0%
!! TACATTAATCTTTTCCTCTT+TGG - chr2_4:43576549-43576568 None:intergenic 25.0%
ATTATCTTGTGATTGTGTGT+TGG - chr2_4:43572282-43572301 None:intergenic 30.0%
! ATGGGTTGTATGTATATCTT+TGG - chr2_4:43572415-43572434 None:intergenic 30.0%
! TTCAGCTTTGATAAGTCAAT+TGG - chr2_4:43572480-43572499 None:intergenic 30.0%
! ATTGACTTATCAAAGCTGAA+TGG + chr2_4:43572480-43572499 Msa0329710:CDS 30.0%
TGGAAAAGAACATGAAAAAG+TGG + chr2_4:43572500-43572519 Msa0329710:CDS 30.0%
AAAAGAACATGAAAAAGTGG+TGG + chr2_4:43572503-43572522 Msa0329710:CDS 30.0%
AGTGACTCCATTAAATCTAA+AGG - chr2_4:43572588-43572607 None:intergenic 30.0%
! TTCCAGAACATTTTCTTTCT+CGG - chr2_4:43572706-43572725 None:intergenic 30.0%
!! AGAAAGAAAATGTTCTGGAA+TGG + chr2_4:43572706-43572725 Msa0329710:CDS 30.0%
ATGGAAAGACTATATCGTTA+TGG + chr2_4:43572725-43572744 Msa0329710:CDS 30.0%
ATGAAGATGCTCTTCAATAT+TGG + chr2_4:43572760-43572779 Msa0329710:CDS 30.0%
!!! TGTTGTGTTTGTTTTTGTGT+GGG - chr2_4:43572893-43572912 None:intergenic 30.0%
ATAAATGGTTGCGAATGTTT+AGG - chr2_4:43572980-43572999 None:intergenic 30.0%
! AACGATTAAGCCATATTTTG+AGG - chr2_4:43573320-43573339 None:intergenic 30.0%
TCGATGAAAACCAATCAATA+TGG + chr2_4:43573339-43573358 Msa0329710:intron 30.0%
! TCTGTTTCTTTGGATATATC+CGG + chr2_4:43573583-43573602 Msa0329710:intron 30.0%
!! ATACGTTTTGGATATTGGAT+CGG + chr2_4:43573606-43573625 Msa0329710:intron 30.0%
CAAGTGTTTATATAAGGTTG+GGG - chr2_4:43573815-43573834 None:intergenic 30.0%
GCAAGTGTTTATATAAGGTT+GGG - chr2_4:43573816-43573835 None:intergenic 30.0%
AGCAAGTGTTTATATAAGGT+TGG - chr2_4:43573817-43573836 None:intergenic 30.0%
AGTTAATTCTAGCGAAAAGT+TGG - chr2_4:43573913-43573932 None:intergenic 30.0%
CTCAAGATAATAGTCGTTTA+TGG - chr2_4:43573957-43573976 None:intergenic 30.0%
GACTATTATCTTGAGATAGA+GGG + chr2_4:43573962-43573981 Msa0329710:intron 30.0%
!! TAGTCTTATTGGTTTGAAGA+CGG + chr2_4:43574296-43574315 Msa0329710:CDS 30.0%
!! TACCATTTGAGTTGTACTTT+CGG - chr2_4:43574580-43574599 None:intergenic 30.0%
CAAATGGTAAAAAAACTGCA+AGG + chr2_4:43574591-43574610 Msa0329710:intron 30.0%
!!! CTCCGTGTGTTTTAATATTT+CGG + chr2_4:43574668-43574687 Msa0329710:intron 30.0%
!! TTTTAAAAGCGTGTACTGTT+TGG + chr2_4:43574714-43574733 Msa0329710:intron 30.0%
! TGGATGAAAGAATTTTACCA+AGG + chr2_4:43574734-43574753 Msa0329710:intron 30.0%
GGACTATTTCGAAAGAAAAT+AGG - chr2_4:43574940-43574959 None:intergenic 30.0%
TGAAACTTTCGAAAAGTTGA+AGG - chr2_4:43574998-43575017 None:intergenic 30.0%
CAAGTCAAGTATGAAACTTT+CGG - chr2_4:43575009-43575028 None:intergenic 30.0%
! AAAATATTCACTATGGTGGA+TGG - chr2_4:43575335-43575354 None:intergenic 30.0%
!! TGGGTAATATTTCTAGGAAA+TGG + chr2_4:43575380-43575399 Msa0329710:intron 30.0%
!! GATTTTCTTGATTTCAGGTA+TGG - chr2_4:43575407-43575426 None:intergenic 30.0%
!! CATTGCATTTTTAAGGAAGT+GGG - chr2_4:43575469-43575488 None:intergenic 30.0%
!! ACATTGCATTTTTAAGGAAG+TGG - chr2_4:43575470-43575489 None:intergenic 30.0%
ATATACCTATCAAAGGAGAA+TGG - chr2_4:43575525-43575544 None:intergenic 30.0%
GATAATAATCTTGGATTGTG+AGG + chr2_4:43575627-43575646 Msa0329710:intron 30.0%
GAAATTCCCAAAAAACCAAA+AGG + chr2_4:43575773-43575792 Msa0329710:intron 30.0%
GAAAAATGGAATTGATACTC+TGG - chr2_4:43576182-43576201 None:intergenic 30.0%
! CTGAATATAGAGAAGTTTTG+TGG + chr2_4:43576266-43576285 Msa0329710:CDS 30.0%
GATTATGTAGACAACTTCTT+TGG + chr2_4:43576292-43576311 Msa0329710:CDS 30.0%
TTATGTAGACAACTTCTTTG+GGG + chr2_4:43576294-43576313 Msa0329710:CDS 30.0%
AACAGAGAAGAAAAAAAGGA+AGG - chr2_4:43576520-43576539 None:intergenic 30.0%
GTCAAACAGAGAAGAAAAAA+AGG - chr2_4:43576524-43576543 None:intergenic 30.0%
GAAAAGGAGAGAAGGAAAAA+TGG - chr2_4:43572237-43572256 None:intergenic 35.0%
TGTAAGATGAAAAGGAGAGA+AGG - chr2_4:43572245-43572264 None:intergenic 35.0%
! AGCTTTGATAAGTCAATTGG+TGG - chr2_4:43572477-43572496 None:intergenic 35.0%
GAACACAATGATTCACTACT+TGG - chr2_4:43572566-43572585 None:intergenic 35.0%
! TCCAGAACATTTTCTTTCTC+GGG - chr2_4:43572705-43572724 None:intergenic 35.0%
!!! CTGTTGTGTTTGTTTTTGTG+TGG - chr2_4:43572894-43572913 None:intergenic 35.0%
ACACTAACCAAATTTGTGCA+AGG + chr2_4:43573202-43573221 Msa0329710:intron 35.0%
TAGTCTACCTTGCACAAATT+TGG - chr2_4:43573212-43573231 None:intergenic 35.0%
!! TGATCTGAGTTGTTTTATCC+TGG - chr2_4:43573250-43573269 None:intergenic 35.0%
TGGTTACGTACCATATTGAT+TGG - chr2_4:43573352-43573371 None:intergenic 35.0%
ACTCGTTAACATAAGTCGAA+GGG + chr2_4:43573419-43573438 Msa0329710:intron 35.0%
ACATGAATCATCAACTGTGT+CGG + chr2_4:43573458-43573477 Msa0329710:intron 35.0%
TTACGAACTCTGCCTATAAA+AGG - chr2_4:43573509-43573528 None:intergenic 35.0%
TCCAATATCCAAAACGTATC+CGG - chr2_4:43573605-43573624 None:intergenic 35.0%
GACTTAAAAATGTCCCACAT+TGG - chr2_4:43573855-43573874 None:intergenic 35.0%
CGACTATTATCTTGAGATAG+AGG + chr2_4:43573961-43573980 Msa0329710:intron 35.0%
! GAGATAGAGGGAATATGTTT+TGG + chr2_4:43573974-43573993 Msa0329710:intron 35.0%
ATTAATTGGTAAGCTAGGAG+TGG + chr2_4:43574251-43574270 Msa0329710:CDS 35.0%
! TGGTTTGCATGTTAAAGTAG+AGG + chr2_4:43574425-43574444 Msa0329710:CDS 35.0%
! TTCCGAAAGTACAACTCAAA+TGG + chr2_4:43574575-43574594 Msa0329710:intron 35.0%
GATAGAAGAAACTTGGATGT+GGG - chr2_4:43575297-43575316 None:intergenic 35.0%
TGATAGAAGAAACTTGGATG+TGG - chr2_4:43575298-43575317 None:intergenic 35.0%
TTGCTGTGATAGAAGAAACT+TGG - chr2_4:43575304-43575323 None:intergenic 35.0%
TACACTTGTTCTCCTCTATA+TGG + chr2_4:43575360-43575379 Msa0329710:intron 35.0%
ACACTTGTTCTCCTCTATAT+GGG + chr2_4:43575361-43575380 Msa0329710:intron 35.0%
!! ATAGAGGTGTTTGCAAAACA+AGG - chr2_4:43575444-43575463 None:intergenic 35.0%
TTTAAGGAAGTGGGAAATAG+AGG - chr2_4:43575460-43575479 None:intergenic 35.0%
TGGACTGTGAGTGAAAAATT+TGG - chr2_4:43575502-43575521 None:intergenic 35.0%
GGATAGGATATACCTATCAA+AGG - chr2_4:43575532-43575551 None:intergenic 35.0%
CAATGTAGCCATTTATCTGA+TGG - chr2_4:43575679-43575698 None:intergenic 35.0%
TAATGGGGAAATGTGAAACT+TGG - chr2_4:43575744-43575763 None:intergenic 35.0%
! AATTTCGCTTGGTGATAATG+GGG - chr2_4:43575759-43575778 None:intergenic 35.0%
! GAATTTCGCTTGGTGATAAT+GGG - chr2_4:43575760-43575779 None:intergenic 35.0%
TTACCATAGTTCACTAGTCA+TGG - chr2_4:43576054-43576073 None:intergenic 35.0%
AATTGATACTCTGGATTGAG+TGG - chr2_4:43576173-43576192 None:intergenic 35.0%
TTCTTCACCAATTCTGGTAA+CGG - chr2_4:43576235-43576254 None:intergenic 35.0%
ATTGGTGAAGAAAGATGGAT+TGG + chr2_4:43576243-43576262 Msa0329710:CDS 35.0%
!! ATATAGAGAAGTTTTGTGGC+AGG + chr2_4:43576270-43576289 Msa0329710:CDS 35.0%
TATGTAGACAACTTCTTTGG+GGG + chr2_4:43576295-43576314 Msa0329710:CDS 35.0%
! GATTTTGCAAAGATCAACTC+TGG + chr2_4:43576343-43576362 Msa0329710:CDS 35.0%
TGATTCTTTATCGCAAGATG+AGG - chr2_4:43576393-43576412 None:intergenic 35.0%
! TACAACTTTGCTGTACGAGA+TGG + chr2_4:43572346-43572365 Msa0329710:five_prime_UTR 40.0%
! ACAACTTTGCTGTACGAGAT+GGG + chr2_4:43572347-43572366 Msa0329710:five_prime_UTR 40.0%
! GTTAAAGGCTTGGTAGATTC+AGG + chr2_4:43572376-43572395 Msa0329710:five_prime_UTR 40.0%
! TCAATTGGTGGCATATCACA+TGG - chr2_4:43572465-43572484 None:intergenic 40.0%
CAAACAACTTTCTTCTCTGG+TGG - chr2_4:43572642-43572661 None:intergenic 40.0%
CCAGAGAAGAAAGTTGTTTG+CGG + chr2_4:43572642-43572661 Msa0329710:CDS 40.0%
TCCCGAGAAAGAAAATGTTC+TGG + chr2_4:43572701-43572720 Msa0329710:CDS 40.0%
AGGACTTACTTGCACACATT+AGG - chr2_4:43572786-43572805 None:intergenic 40.0%
!!! TGTGTTTGTTTTTGTGTGGG+TGG - chr2_4:43572890-43572909 None:intergenic 40.0%
TTAGTGGCTATCCTAAGCTT+GGG - chr2_4:43572931-43572950 None:intergenic 40.0%
TGTTTAGGCCAATTTCGTGT+CGG - chr2_4:43572965-43572984 None:intergenic 40.0%
TAAAGAGAGTGACCTAATCG+TGG - chr2_4:43573170-43573189 None:intergenic 40.0%
!! TCTGAGTTGTTTTATCCTGG+AGG - chr2_4:43573247-43573266 None:intergenic 40.0%
TCTACTCCTTTCTATCCCTT+CGG - chr2_4:43573387-43573406 None:intergenic 40.0%
GACTCGTTAACATAAGTCGA+AGG + chr2_4:43573418-43573437 Msa0329710:intron 40.0%
TGTCGGTGTAAAGAATGAGT+GGG + chr2_4:43573475-43573494 Msa0329710:intron 40.0%
! AACAGAAACGCGTTAGCTTA+AGG - chr2_4:43573569-43573588 None:intergenic 40.0%
! CTAACGCGTTTCTGTTTCTT+TGG + chr2_4:43573573-43573592 Msa0329710:intron 40.0%
! GGATATATCCGGATACGTTT+TGG + chr2_4:43573594-43573613 Msa0329710:intron 40.0%
!! TCCGGATACGTTTTGGATAT+TGG + chr2_4:43573601-43573620 Msa0329710:intron 40.0%
GATCGGATTCGTTACACTTT+CGG + chr2_4:43573623-43573642 Msa0329710:intron 40.0%
! TAAACACTTGCTAGTTGGTG+TGG + chr2_4:43573825-43573844 Msa0329710:intron 40.0%
CCACAGTAAGATCTGGATTT+GGG - chr2_4:43574347-43574366 None:intergenic 40.0%
CCAAATCCAGATCTTACTGT+GGG + chr2_4:43574345-43574364 Msa0329710:CDS 40.0%
GTAGAGGATGACAATGATGT+TGG + chr2_4:43574441-43574460 Msa0329710:CDS 40.0%
GATGACAATGATGTTGGACA+AGG + chr2_4:43574447-43574466 Msa0329710:CDS 40.0%
ATGATGTTGGACAAGGAGAA+TGG + chr2_4:43574454-43574473 Msa0329710:CDS 40.0%
ATGACTAAAGCTCCAGGAAT+TGG - chr2_4:43574492-43574511 None:intergenic 40.0%
! ACATTGATGACTAAAGCTCC+AGG - chr2_4:43574498-43574517 None:intergenic 40.0%
! GGAGCTTTAGTCATCAATGT+TGG + chr2_4:43574498-43574517 Msa0329710:CDS 40.0%
TACCTATCAAAGGAGAATGG+TGG - chr2_4:43575522-43575541 None:intergenic 40.0%
! TGAGTTGGAATAGTTGGGAT+AGG - chr2_4:43575548-43575567 None:intergenic 40.0%
!! CTTATGGGTTAGAAGCTTAG+AGG - chr2_4:43575581-43575600 None:intergenic 40.0%
ATAATCTTGGATTGTGAGGG+AGG + chr2_4:43575631-43575650 Msa0329710:intron 40.0%
! GGAATTTCGCTTGGTGATAA+TGG - chr2_4:43575761-43575780 None:intergenic 40.0%
!!! GGTTTTTTGGGAATTTCGCT+TGG - chr2_4:43575770-43575789 None:intergenic 40.0%
!! CACATTTGATGGGTTTCACT+TGG + chr2_4:43575986-43576005 Msa0329710:intron 40.0%
!! ATTTGATGGGTTTCACTTGG+TGG + chr2_4:43575989-43576008 Msa0329710:intron 40.0%
!! TTTGATGGGTTTCACTTGGT+GGG + chr2_4:43575990-43576009 Msa0329710:intron 40.0%
GAACCATGACTAGTGAACTA+TGG + chr2_4:43576048-43576067 Msa0329710:intron 40.0%
GGCATAGGATGAGTGAAAAA+TGG - chr2_4:43576196-43576215 None:intergenic 40.0%
TCTTCACCAATTCTGGTAAC+GGG - chr2_4:43576234-43576253 None:intergenic 40.0%
CCATCTTTCTTCACCAATTC+TGG - chr2_4:43576241-43576260 None:intergenic 40.0%
CCAGAATTGGTGAAGAAAGA+TGG + chr2_4:43576238-43576257 Msa0329710:CDS 40.0%
! TTCTTTGGGGGTTCTCATAA+AGG + chr2_4:43576307-43576326 Msa0329710:CDS 40.0%
TCTCTGTTTGACAACCAAAG+AGG + chr2_4:43576532-43576551 Msa0329710:three_prime_UTR 40.0%
TGACACTGCCATCACTTAGT+AGG - chr2_4:43572201-43572220 None:intergenic 45.0%
! TTTGCTGTACGAGATGGGAA+TGG + chr2_4:43572352-43572371 Msa0329710:five_prime_UTR 45.0%
CGAGATGGGAATGGAGTTAA+AGG + chr2_4:43572361-43572380 Msa0329710:five_prime_UTR 45.0%
TGGGAATGGAGTTAAAGGCT+TGG + chr2_4:43572366-43572385 Msa0329710:five_prime_UTR 45.0%
GTTAGAGCAGCTGAAACTCT+TGG + chr2_4:43572534-43572553 Msa0329710:CDS 45.0%
CCGCAAACAACTTTCTTCTC+TGG - chr2_4:43572645-43572664 None:intergenic 45.0%
TAGTGGCTATCCTAAGCTTG+GGG - chr2_4:43572930-43572949 None:intergenic 45.0%
CTTAGTGGCTATCCTAAGCT+TGG - chr2_4:43572932-43572951 None:intergenic 45.0%
!! GAGTTGTTTTATCCTGGAGG+CGG - chr2_4:43573244-43573263 None:intergenic 45.0%
ACCACTCTTATCGAAACCGA+AGG + chr2_4:43573368-43573387 Msa0329710:intron 45.0%
CCACTCTTATCGAAACCGAA+GGG + chr2_4:43573369-43573388 Msa0329710:intron 45.0%
TCGAAACCGAAGGGATAGAA+AGG + chr2_4:43573378-43573397 Msa0329710:intron 45.0%
ATAAGTCGAAGGGAGAAGAG+AGG + chr2_4:43573429-43573448 Msa0329710:intron 45.0%
! GTGTCGGTGTAAAGAATGAG+TGG + chr2_4:43573474-43573493 Msa0329710:intron 45.0%
GTCGGTGTAAAGAATGAGTG+GGG + chr2_4:43573476-43573495 Msa0329710:intron 45.0%
TCGGTGTAAAGAATGAGTGG+GGG + chr2_4:43573477-43573496 Msa0329710:intron 45.0%
! TGGGGGAACTCTCCTTTTAT+AGG + chr2_4:43573494-43573513 Msa0329710:intron 45.0%
AAGTGCAACTTCCCTGCAAA+TGG - chr2_4:43574184-43574203 None:intergenic 45.0%
CCCAAATCCAGATCTTACTG+TGG + chr2_4:43574344-43574363 Msa0329710:CDS 45.0%
CCCACAGTAAGATCTGGATT+TGG - chr2_4:43574348-43574367 None:intergenic 45.0%
!! ATCACAGTGCTGCTTCAAGA+TGG + chr2_4:43574396-43574415 Msa0329710:CDS 45.0%
CTGGAAATTCCACCAATTCC+TGG + chr2_4:43574477-43574496 Msa0329710:CDS 45.0%
ACTAAAGCTCCAGGAATTGG+TGG - chr2_4:43574489-43574508 None:intergenic 45.0%
!! CAATGTTGGTGATGCTCTAC+AGG + chr2_4:43574512-43574531 Msa0329710:CDS 45.0%
! GAGGTGTTTGCAAAACAAGG+AGG - chr2_4:43575441-43575460 None:intergenic 45.0%
GTCCACCATTCTCCTTTGAT+AGG + chr2_4:43575517-43575536 Msa0329710:intron 45.0%
CCAATCATCTCTGTTGGCAT+AGG - chr2_4:43576211-43576230 None:intergenic 45.0%
CCTATGCCAACAGAGATGAT+TGG + chr2_4:43576208-43576227 Msa0329710:CDS 45.0%
!!! TTTTTATAAAGAAATTTAAT+AGG + chr2_4:43575260-43575279 Msa0329710:intron 5.0%
!!! TTTTATAAAGAAATTTAATA+GGG + chr2_4:43575261-43575280 Msa0329710:intron 5.0%
!! ATATTTATTAATTACTATAA+TGG + chr2_4:43575912-43575931 Msa0329710:intron 5.0%
CAACAAACACCCCCAAGCTT+AGG + chr2_4:43572917-43572936 Msa0329710:intron 50.0%
AGTGGCTATCCTAAGCTTGG+GGG - chr2_4:43572929-43572948 None:intergenic 50.0%
! GTCGGTGTCTGGTTTCTTAG+TGG - chr2_4:43572947-43572966 None:intergenic 50.0%
ACCAGACACCGACACGAAAT+TGG + chr2_4:43572954-43572973 Msa0329710:intron 50.0%
!! TATCGGGTTGAGCCACGATT+AGG + chr2_4:43573155-43573174 Msa0329710:intron 50.0%
CCCTTCGGTTTCGATAAGAG+TGG - chr2_4:43573372-43573391 None:intergenic 50.0%
! TTTTGACCCAATAGCCCGAC+CGG + chr2_4:43573704-43573723 Msa0329710:intron 50.0%
GCTCACCAGTTCGCAAAAGT+GGG + chr2_4:43573761-43573780 Msa0329710:intron 50.0%
!! GGATTCCCACTTTTGCGAAC+TGG - chr2_4:43573769-43573788 None:intergenic 50.0%
TCGCAAAAGTGGGAATCCCA+AGG + chr2_4:43573771-43573790 Msa0329710:intron 50.0%
CGCAAAAGTGGGAATCCCAA+GGG + chr2_4:43573772-43573791 Msa0329710:intron 50.0%
TTGGTGTGGCTCACCAATGT+GGG + chr2_4:43573839-43573858 Msa0329710:intron 50.0%
GATCTGGATTTGGGCATGCT+GGG - chr2_4:43574338-43574357 None:intergenic 50.0%
AGATCTGGATTTGGGCATGC+TGG - chr2_4:43574339-43574358 None:intergenic 50.0%
CAGATCTTACTGTGGGTGCA+GGG + chr2_4:43574352-43574371 Msa0329710:CDS 50.0%
!! GTGCTGCTTCAAGATGGAGT+TGG + chr2_4:43574402-43574421 Msa0329710:CDS 50.0%
CTGCTTCAAGATGGAGTTGG+TGG + chr2_4:43574405-43574424 Msa0329710:CDS 50.0%
TGTTGGACAAGGAGAATGGC+TGG + chr2_4:43574458-43574477 Msa0329710:CDS 50.0%
AACGGGCCAATCATCTCTGT+TGG - chr2_4:43576217-43576236 None:intergenic 50.0%
! GATTGGCCCGTTACCAGAAT+TGG + chr2_4:43576225-43576244 Msa0329710:CDS 50.0%
! GCCAATTTCGTGTCGGTGTC+TGG - chr2_4:43572958-43572977 None:intergenic 55.0%
CGCTCACCAGTTCGCAAAAG+TGG + chr2_4:43573760-43573779 Msa0329710:intron 55.0%
AAGGTTGGGGTGACCTCCAA+GGG - chr2_4:43573802-43573821 None:intergenic 55.0%
TAAGGTTGGGGTGACCTCCA+AGG - chr2_4:43573803-43573822 None:intergenic 55.0%
GTTGGTGTGGCTCACCAATG+TGG + chr2_4:43573838-43573857 Msa0329710:intron 55.0%
CCTGCACCCACAGTAAGATC+TGG - chr2_4:43574354-43574373 None:intergenic 55.0%
CCAGATCTTACTGTGGGTGC+AGG + chr2_4:43574351-43574370 Msa0329710:CDS 55.0%
CAGGGCGACATACAGACACA+GGG + chr2_4:43574370-43574389 Msa0329710:CDS 55.0%
! GTTTTATCCTGGAGGCGGCG+CGG - chr2_4:43573239-43573258 None:intergenic 60.0%
TATATCACGCGCGACGACGC+CGG - chr2_4:43573726-43573745 None:intergenic 60.0%
! GAATCCCAAGGGCACACCCT+TGG + chr2_4:43573783-43573802 Msa0329710:intron 60.0%
! ACCTCCAAGGGTGTGCCCTT+GGG - chr2_4:43573790-43573809 None:intergenic 60.0%
GCAGGGCGACATACAGACAC+AGG + chr2_4:43574369-43574388 Msa0329710:CDS 60.0%
ACGACGCCGGTCGGGCTATT+GGG - chr2_4:43573713-43573732 None:intergenic 65.0%
! TCCCAAGGGCACACCCTTGG+AGG + chr2_4:43573786-43573805 Msa0329710:intron 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG - chr2_4:43573791-43573810 None:intergenic 65.0%
CTAACAACCGCGCCGCCTCC+AGG + chr2_4:43573229-43573248 Msa0329710:intron 70.0%
GACGACGCCGGTCGGGCTAT+TGG - chr2_4:43573714-43573733 None:intergenic 70.0%
TCACGCGCGACGACGCCGGT+CGG - chr2_4:43573722-43573741 None:intergenic 75.0%
! CACGCGCGACGACGCCGGTC+GGG - chr2_4:43573721-43573740 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 43572194 43576615 43572194 ID=Msa0329710;Name=Msa0329710
chr2_4 mRNA 43572194 43576615 43572194 ID=Msa0329710-mRNA-1;Parent=Msa0329710;Name=Msa0329710-mRNA-1;_AED=0.33;_eAED=0.33;_QI=277|1|1|1|1|1|3|246|306
chr2_4 exon 43572194 43572796 43572194 ID=Msa0329710-mRNA-1:exon:13254;Parent=Msa0329710-mRNA-1
chr2_4 exon 43574191 43574533 43574191 ID=Msa0329710-mRNA-1:exon:13255;Parent=Msa0329710-mRNA-1
chr2_4 exon 43576118 43576615 43576118 ID=Msa0329710-mRNA-1:exon:13256;Parent=Msa0329710-mRNA-1
chr2_4 five_prime_UTR 43572194 43572470 43572194 ID=Msa0329710-mRNA-1:five_prime_utr;Parent=Msa0329710-mRNA-1
chr2_4 CDS 43572471 43572796 43572471 ID=Msa0329710-mRNA-1:cds;Parent=Msa0329710-mRNA-1
chr2_4 CDS 43574191 43574533 43574191 ID=Msa0329710-mRNA-1:cds;Parent=Msa0329710-mRNA-1
chr2_4 CDS 43576118 43576369 43576118 ID=Msa0329710-mRNA-1:cds;Parent=Msa0329710-mRNA-1
chr2_4 three_prime_UTR 43576370 43576615 43576370 ID=Msa0329710-mRNA-1:three_prime_utr;Parent=Msa0329710-mRNA-1
Gene Sequence

>Msa0329710

ATGCCACCAATTGACTTATCAAAGCTGAATGGAAAAGAACATGAAAAAGTGGTGGATGAGATTGTTAGAGCAGCTGAAACTCTTGGATTCTTCCAAGTAGTGAATCATTGTGTTCCTTTAGATTTAATGGAGTCACTTAAAGATTCAGCACACACATTTTTCAATATGCCACCAGAGAAGAAAGTTGTTTGCGGAAAAAGTTTAAAGATGAGATATGGGACTAGCTTTGCTCCCGAGAAAGAAAATGTTCTGGAATGGAAAGACTATATCGTTATGGAGTATAGTAATGATGAAGATGCTCTTCAATATTGGCCTAATGTGTGCAAGGAAGTTGCACTTGAATATTTCAAGTTATCATCAAAGATAGTTAGAGACATTTTAGAAATATTAATTGGTAAGCTAGGAGTGGAAGTAGATGACTCAAAAATTGATAGTCTTATTGGTTTGAAGACGGTTAACATGAACTACTACCCAGCATGCCCAAATCCAGATCTTACTGTGGGTGCAGGGCGACATACAGACACAGGGAGCATCACAGTGCTGCTTCAAGATGGAGTTGGTGGTTTGCATGTTAAAGTAGAGGATGACAATGATGTTGGACAAGGAGAATGGCTGGAAATTCCACCAATTCCTGGAGCTTTAGTCATCAATGTTGGTGATGCTCTACAGGTACTAAGCAATGGAAAGTACAAGAGCTGTGAACATCGAGTAATGACAACATCCACTCAATCCAGAGTATCAATTCCATTTTTCACTCATCCTATGCCAACAGAGATGATTGGCCCGTTACCAGAATTGGTGAAGAAAGATGGATTGGCTGAATATAGAGAAGTTTTGTGGCAGGATTATGTAGACAACTTCTTTGGGGGTTCTCATAAAGGAAAGAAGACTCTTGATTTTGCAAAGATCAACTCTGGCTAA

Protein sequence

>Msa0329710

MPPIDLSKLNGKEHEKVVDEIVRAAETLGFFQVVNHCVPLDLMESLKDSAHTFFNMPPEKKVVCGKSLKMRYGTSFAPEKENVLEWKDYIVMEYSNDEDALQYWPNVCKEVALEYFKLSSKIVRDILEILIGKLGVEVDDSKIDSLIGLKTVNMNYYPACPNPDLTVGAGRHTDTGSITVLLQDGVGGLHVKVEDDNDVGQGEWLEIPPIPGALVINVGDALQVLSNGKYKSCEHRVMTTSTQSRVSIPFFTHPMPTEMIGPLPELVKKDGLAEYREVLWQDYVDNFFGGSHKGKKTLDFAKINSG*