AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1078570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1078570 MtrunA17_Chr7g0263531 87.900 438 17 3 1 402 1 438 0.0 773
Msa1078570 MtrunA17_Chr5g0418191 38.539 397 166 11 26 402 59 397 1.68e-73 236
Msa1078570 MtrunA17_Chr7g0218081 49.416 257 105 5 153 384 213 469 1.35e-70 231
Msa1078570 MtrunA17_Chr7g0218081 58.065 62 25 1 326 387 229 289 1.08e-16 82.0
Msa1078570 MtrunA17_Chr5g0445311 43.494 269 132 4 130 384 161 423 2.40e-63 212
Msa1078570 MtrunA17_Chr5g0432161 49.362 235 96 5 168 384 251 480 2.48e-62 210
Msa1078570 MtrunA17_Chr5g0432161 55.932 59 25 1 326 384 245 302 2.57e-13 71.6
Msa1078570 MtrunA17_Chr3g0101131 48.927 233 95 5 168 384 250 474 2.82e-61 207
Msa1078570 MtrunA17_Chr3g0101131 54.237 59 26 1 326 384 244 301 1.20e-13 72.8
Msa1078570 MtrunA17_Chr7g0249311 44.245 278 106 5 168 396 186 463 1.03e-60 207
Msa1078570 MtrunA17_Chr7g0249311 59.322 59 23 1 326 384 180 237 3.17e-15 77.8
Msa1078570 MtrunA17_Chr7g0243891 50.673 223 92 5 168 384 223 433 3.30e-60 204
Msa1078570 MtrunA17_Chr7g0243891 48.649 74 37 1 326 399 217 289 2.29e-14 74.7
Msa1078570 MtrunA17_Chr3g0106491 48.430 223 106 2 168 384 205 424 1.26e-59 201
Msa1078570 MtrunA17_Chr3g0106491 53.226 62 28 1 326 387 199 259 7.60e-14 73.2
Msa1078570 MtrunA17_Chr4g0004911 43.321 277 121 8 118 385 147 396 3.74e-59 200
Msa1078570 MtrunA17_Chr3g0079691 43.841 276 100 6 168 390 287 560 1.78e-58 202
Msa1078570 MtrunA17_Chr3g0079691 57.627 59 24 1 326 384 281 338 1.77e-14 75.5
Msa1078570 MtrunA17_Chr4g0042831 48.444 225 81 6 168 390 152 343 5.12e-58 194
Msa1078570 MtrunA17_Chr4g0042831 52.542 59 28 0 326 384 146 204 6.17e-13 69.7
Msa1078570 MtrunA17_Chr4g0042831 60.377 53 20 1 165 216 282 334 1.07e-11 65.9
Msa1078570 MtrunA17_Chr7g0249301 41.404 285 97 6 168 384 69 351 7.45e-55 186
Msa1078570 MtrunA17_Chr7g0249301 56.250 64 27 1 321 384 58 120 1.78e-15 77.4
Msa1078570 MtrunA17_Chr5g0447701 37.500 224 122 4 168 384 99 311 1.17e-38 143
Msa1078570 MtrunA17_Chr5g0447701 40.659 91 48 2 298 388 70 154 2.59e-12 67.8
Msa1078570 MtrunA17_Chr6g0468181 93.846 65 4 0 177 241 18 82 7.73e-37 130
Msa1078570 MtrunA17_Chr4g0074001 35.498 231 132 5 168 385 193 419 1.14e-36 140
Msa1078570 MtrunA17_Chr4g0074001 50.000 62 30 1 165 225 363 424 2.90e-11 65.1
Msa1078570 MtrunA17_Chr7g0270191 61.842 76 29 0 310 385 130 205 1.85e-27 110
Msa1078570 MtrunA17_Chr7g0270191 58.491 53 21 1 165 216 149 201 9.27e-11 62.4
Msa1078570 MtrunA17_Chr1g0188941 52.000 75 36 0 310 384 36 110 1.39e-25 100
Msa1078570 MtrunA17_Chr4g0051881 47.525 101 53 0 284 384 137 237 4.14e-25 104
Msa1078570 MtrunA17_Chr4g0051881 58.491 53 21 1 165 216 182 234 5.42e-11 63.5
Msa1078570 MtrunA17_Chr1g0194481 57.333 75 32 0 310 384 143 217 2.14e-24 102
Msa1078570 MtrunA17_Chr1g0194481 56.604 53 22 1 165 216 162 214 6.31e-11 63.2
Msa1078570 MtrunA17_Chr8g0335811 51.064 94 43 2 308 401 137 227 6.45e-24 99.0
Msa1078570 MtrunA17_Chr8g0335811 60.000 50 19 1 168 216 161 210 2.80e-11 63.2
Msa1078570 MtrunA17_Chr3g0129361 56.944 72 31 0 310 381 129 200 1.94e-23 97.4
Msa1078570 MtrunA17_Chr5g0443131 60.274 73 27 1 312 384 146 216 3.28e-23 99.0
Msa1078570 MtrunA17_Chr5g0443131 60.377 53 20 1 165 216 161 213 1.24e-11 65.1
Msa1078570 MtrunA17_Chr5g0418781 47.917 96 50 0 305 400 104 199 4.63e-23 97.8
Msa1078570 MtrunA17_Chr8g0383351 57.534 73 30 1 310 381 144 216 8.28e-23 96.3
Msa1078570 MtrunA17_Chr6g0485431 51.282 78 37 1 309 385 138 215 1.08e-22 98.6
Msa1078570 MtrunA17_Chr2g0294231 56.000 75 33 0 310 384 188 262 1.40e-22 98.2
Msa1078570 MtrunA17_Chr2g0294231 46.753 77 31 2 165 231 207 283 4.28e-11 63.9
Msa1078570 MtrunA17_Chr8g0383251 50.685 73 36 0 313 385 96 168 1.04e-21 91.7
Msa1078570 MtrunA17_Chr2g0288871 31.658 199 115 6 200 384 174 365 1.16e-21 97.1
Msa1078570 MtrunA17_Chr7g0224801 54.667 75 32 1 315 389 83 155 2.32e-21 90.5
Msa1078570 MtrunA17_Chr4g0060271 51.351 74 35 1 313 385 243 316 3.42e-21 95.9
Msa1078570 MtrunA17_Chr2g0302391 40.000 135 62 4 255 384 151 271 3.78e-21 94.7
Msa1078570 MtrunA17_Chr3g0129321 44.706 85 47 0 309 393 102 186 1.33e-20 89.4
Msa1078570 MtrunA17_Chr4g0051181 51.351 74 35 1 313 385 231 304 1.70e-20 93.2
Msa1078570 MtrunA17_Chr5g0401821 48.000 75 38 1 321 394 195 269 2.10e-20 90.1
Msa1078570 MtrunA17_Chr3g0099641 33.544 158 76 3 228 384 182 311 2.85e-20 92.4
Msa1078570 MtrunA17_Chr7g0270831 50.685 73 35 1 313 384 204 276 3.13e-20 92.0
Msa1078570 MtrunA17_Chr4g0068541 52.055 73 35 0 313 385 196 268 3.56e-20 91.7
Msa1078570 MtrunA17_Chr4g0068541 56.604 53 22 1 165 216 212 264 9.38e-11 63.2
Msa1078570 MtrunA17_Chr2g0333851 52.857 70 32 1 316 384 160 229 6.10e-20 89.7
Msa1078570 MtrunA17_Chr4g0053281 51.429 70 33 1 326 394 267 336 7.96e-20 89.7
Msa1078570 MtrunA17_Chr4g0053281 54.902 51 21 2 168 216 273 323 7.80e-11 63.2
Msa1078570 MtrunA17_Chr1g0147881 52.941 68 31 1 317 383 254 321 1.04e-19 89.4
Msa1078570 MtrunA17_Chr1g0147881 44.578 83 38 3 159 233 254 336 1.37e-12 68.6
Msa1078570 MtrunA17_Chr4g0075201 41.489 94 54 1 292 384 234 327 1.20e-19 90.9
Msa1078570 MtrunA17_Chr7g0248721 35.669 157 85 4 248 401 75 218 2.18e-19 86.3
Msa1078570 MtrunA17_Chr8g0379461 54.930 71 31 1 326 395 77 147 2.76e-19 86.7
Msa1078570 MtrunA17_Chr4g0071521 57.576 66 27 1 317 381 237 302 2.85e-19 87.8
Msa1078570 MtrunA17_Chr7g0216891 50.633 79 36 2 313 390 207 283 5.22e-19 89.0
Msa1078570 MtrunA17_Chr1g0189391 52.857 70 32 1 313 381 85 154 6.04e-19 87.0
Msa1078570 MtrunA17_Chr7g0248691 42.241 116 49 4 286 399 131 230 1.72e-18 85.9
Msa1078570 MtrunA17_Chr1g0150801 56.667 60 26 0 322 381 99 158 1.74e-18 82.0
Msa1078570 MtrunA17_Chr5g0432071 62.903 62 22 1 168 228 111 172 1.96e-18 83.2
Msa1078570 MtrunA17_Chr5g0432071 52.542 59 27 1 326 384 105 162 4.86e-13 67.8
Msa1078570 MtrunA17_Chr2g0322391 43.529 85 47 1 301 384 325 409 2.12e-18 87.4
Msa1078570 MtrunA17_Chr4g0025061 40.000 110 54 3 287 384 311 420 2.40e-18 87.0
Msa1078570 MtrunA17_Chr7g0238921 60.714 56 22 0 326 381 125 180 2.55e-18 85.1
Msa1078570 MtrunA17_Chr1g0150281 50.746 67 32 1 316 381 131 197 2.57e-18 84.7
Msa1078570 MtrunA17_Chr1g0150281 50.909 55 25 2 168 220 147 201 6.54e-11 62.8
Msa1078570 MtrunA17_Chr8g0386241 50.000 68 34 0 314 381 92 159 3.08e-18 82.0
Msa1078570 MtrunA17_Chr8g0386241 49.123 57 28 1 161 216 103 159 5.65e-11 61.2
Msa1078570 MtrunA17_Chr4g0001361 52.381 63 29 1 323 384 160 222 9.95e-18 83.6
Msa1078570 MtrunA17_Chr1g0184691 57.895 57 23 1 326 381 294 350 1.23e-17 83.6
Msa1078570 MtrunA17_Chr7g0228941 52.239 67 31 1 317 382 44 110 1.24e-17 78.6
Msa1078570 MtrunA17_Chr3g0136961 36.220 127 57 5 279 381 69 195 1.85e-17 82.4
Msa1078570 MtrunA17_Chr3g0136961 50.909 55 25 2 168 220 145 199 4.97e-11 63.2
Msa1078570 MtrunA17_Chr2g0284321 52.564 78 31 3 326 397 36 113 1.92e-17 80.5
Msa1078570 MtrunA17_Chr8g0348311 46.000 100 35 4 287 384 133 215 2.49e-17 82.4
Msa1078570 MtrunA17_Chr2g0319961 57.377 61 25 1 326 385 81 141 2.98e-17 81.3
Msa1078570 MtrunA17_Chr5g0447711 46.667 75 40 0 310 384 215 289 4.75e-17 81.3
Msa1078570 MtrunA17_Chr8g0387501 52.174 69 31 2 317 384 122 189 6.66e-17 80.1
Msa1078570 MtrunA17_Chr2g0293481 45.833 96 45 3 290 384 238 327 1.08e-16 81.6
Msa1078570 MtrunA17_Chr1g0202461 39.806 103 46 2 283 384 234 321 3.70e-16 79.7
Msa1078570 MtrunA17_Chr1g0202461 35.955 89 46 3 143 229 252 331 5.14e-11 63.9
Msa1078570 MtrunA17_Chr3g0139021 47.312 93 37 4 290 381 290 371 4.59e-16 79.3
Msa1078570 MtrunA17_Chr7g0270051 48.571 70 33 2 325 391 53 122 1.57e-15 76.3
Msa1078570 MtrunA17_Chr4g0025051 45.205 73 39 1 313 384 323 395 1.62e-15 78.6
Msa1078570 MtrunA17_Chr2g0289181 44.444 81 42 2 320 397 9 89 2.35e-15 75.1
Msa1078570 MtrunA17_Chr2g0289181 49.398 83 36 4 150 230 7 85 3.68e-12 65.9
Msa1078570 MtrunA17_Chr1g0150271 45.455 66 35 1 320 384 96 161 3.50e-15 75.1
Msa1078570 MtrunA17_Chr3g0126391 48.649 74 30 2 309 379 122 190 8.29e-15 75.1
Msa1078570 MtrunA17_Chr8g0387981 50.704 71 29 2 315 379 119 189 1.14e-13 72.0
Msa1078570 MtrunA17_Chr5g0431811 30.928 194 110 7 197 385 561 735 1.17e-12 70.1
Msa1078570 MtrunA17_Chr4g0024391 37.805 82 50 1 304 384 208 289 1.79e-12 68.9
Msa1078570 MtrunA17_Chr2g0315381 33.871 124 63 4 260 379 93 201 2.24e-12 67.4
Msa1078570 MtrunA17_Chr1g0188961 50.000 52 24 1 345 394 3 54 6.96e-12 60.5
Msa1078570 MtrunA17_Chr2g0315361 46.774 62 30 1 321 379 144 205 3.00e-11 63.9
Msa1078570 MtrunA17_Chr5g0419241 40.000 60 36 0 292 351 44 103 5.12e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1078570 AT2G37260.1 41.876 437 173 14 2 385 1 409 2.07e-89 277
Msa1078570 AT2G37260.2 43.785 354 138 12 63 385 4 327 5.75e-76 239
Msa1078570 AT2G37260.3 43.785 354 140 11 63 385 4 329 3.03e-75 238
Msa1078570 AT2G03340.1 50.420 238 108 4 162 390 244 480 5.66e-71 232
Msa1078570 AT1G13960.2 47.561 246 106 5 162 384 70 315 7.97e-67 216
Msa1078570 AT1G13960.1 47.561 246 106 5 162 384 223 468 1.14e-65 218
Msa1078570 AT2G38470.1 49.789 237 93 6 168 384 191 421 1.13e-62 210
Msa1078570 AT2G38470.1 54.237 59 26 1 326 384 185 242 4.91e-13 70.9
Msa1078570 AT4G26640.5 46.781 233 110 4 168 390 42 270 5.54e-62 204
Msa1078570 AT4G26640.6 46.781 233 110 4 168 390 42 270 5.54e-62 204
Msa1078570 AT4G26640.4 46.781 233 110 4 168 390 42 270 5.54e-62 204
Msa1078570 AT4G26640.3 46.781 233 110 4 168 390 42 270 5.54e-62 204
Msa1078570 AT4G26640.7 46.781 233 110 4 168 390 178 406 8.14e-62 208
Msa1078570 AT4G26640.1 46.781 233 110 4 168 390 146 374 1.29e-61 206
Msa1078570 AT4G26640.2 46.781 233 110 4 168 390 218 446 2.36e-61 207
Msa1078570 AT5G07100.2 48.165 218 64 4 168 384 31 200 7.25e-58 188
Msa1078570 AT5G07100.2 50.847 59 29 0 326 384 25 83 1.29e-12 67.0
Msa1078570 AT5G07100.4 48.165 218 64 4 168 384 31 200 7.25e-58 188
Msa1078570 AT5G07100.4 50.847 59 29 0 326 384 25 83 1.29e-12 67.0
Msa1078570 AT5G07100.5 48.165 218 64 4 168 384 31 200 7.25e-58 188
Msa1078570 AT5G07100.5 50.847 59 29 0 326 384 25 83 1.29e-12 67.0
Msa1078570 AT5G07100.3 48.165 218 64 4 168 384 31 200 7.25e-58 188
Msa1078570 AT5G07100.3 50.847 59 29 0 326 384 25 83 1.29e-12 67.0
Msa1078570 AT5G07100.1 48.165 218 64 4 168 384 124 293 1.18e-57 191
Msa1078570 AT5G07100.1 50.847 59 29 0 326 384 118 176 2.30e-12 67.8
Msa1078570 AT3G01080.1 46.083 217 92 3 168 384 174 365 3.86e-56 190
Msa1078570 AT3G01080.1 43.590 78 43 1 140 216 285 362 5.15e-12 67.4
Msa1078570 AT4G26440.1 42.748 262 90 4 168 384 185 431 4.79e-56 194
Msa1078570 AT4G26440.1 54.237 59 26 1 326 384 179 236 2.76e-13 72.0
Msa1078570 AT5G56270.1 44.118 272 92 6 168 384 280 546 7.89e-56 195
Msa1078570 AT5G56270.1 56.452 62 26 1 326 387 274 334 4.56e-15 77.4
Msa1078570 AT3G01080.2 45.622 217 93 3 168 384 212 403 8.21e-56 191
Msa1078570 AT3G01080.2 43.590 78 43 1 140 216 323 400 5.40e-12 67.8
Msa1078570 AT2G30250.1 45.815 227 101 6 168 384 173 387 2.22e-50 174
Msa1078570 AT2G04880.2 39.676 247 123 6 168 397 118 355 1.11e-45 164
Msa1078570 AT2G04880.2 45.570 79 42 1 319 397 105 182 1.39e-15 78.6
Msa1078570 AT2G04880.2 53.125 64 29 1 154 216 276 339 4.07e-13 71.2
Msa1078570 AT4G12020.3 42.991 214 101 6 145 345 456 661 6.85e-40 152
Msa1078570 AT4G12020.3 48.485 66 32 2 319 384 463 526 2.05e-12 69.7
Msa1078570 AT4G12020.6 42.991 214 101 6 145 345 456 661 7.29e-40 152
Msa1078570 AT4G12020.6 48.485 66 32 2 319 384 463 526 2.10e-12 69.7
Msa1078570 AT4G12020.8 42.991 214 101 6 145 345 456 661 7.29e-40 152
Msa1078570 AT4G12020.8 48.485 66 32 2 319 384 463 526 2.10e-12 69.7
Msa1078570 AT4G12020.4 42.991 214 101 6 145 345 456 661 7.39e-40 152
Msa1078570 AT4G12020.4 48.485 66 32 2 319 384 463 526 2.28e-12 69.7
Msa1078570 AT4G12020.1 42.991 214 101 6 145 345 456 661 7.46e-40 152
Msa1078570 AT4G12020.1 48.485 66 32 2 319 384 463 526 2.28e-12 69.7
Msa1078570 AT4G12020.9 42.991 214 101 6 145 345 456 661 7.46e-40 152
Msa1078570 AT4G12020.9 48.485 66 32 2 319 384 463 526 2.28e-12 69.7
Msa1078570 AT4G12020.10 42.991 214 101 6 145 345 456 661 7.52e-40 152
Msa1078570 AT4G12020.10 48.485 66 32 2 319 384 463 526 2.12e-12 69.7
Msa1078570 AT4G12020.7 42.991 214 101 6 145 345 456 661 8.19e-40 152
Msa1078570 AT4G12020.7 48.485 66 32 2 319 384 463 526 2.34e-12 69.7
Msa1078570 AT4G12020.2 42.991 214 101 6 145 345 456 661 8.21e-40 152
Msa1078570 AT4G12020.2 48.485 66 32 2 319 384 463 526 2.36e-12 69.7
Msa1078570 AT4G12020.5 42.991 214 101 6 145 345 389 594 9.38e-40 152
Msa1078570 AT4G12020.5 48.485 66 32 2 319 384 396 459 2.41e-12 69.7
Msa1078570 AT4G12020.11 42.991 214 101 6 145 345 456 661 1.74e-39 151
Msa1078570 AT4G12020.11 48.485 66 32 2 319 384 463 526 2.90e-12 69.3
Msa1078570 AT4G30935.1 39.224 232 112 9 168 385 175 391 2.33e-38 144
Msa1078570 AT4G30935.1 43.662 71 39 1 165 234 335 405 2.26e-11 65.9
Msa1078570 AT2G04880.1 49.550 111 55 1 287 397 270 379 4.16e-27 113
Msa1078570 AT2G04880.1 45.570 79 42 1 319 397 105 182 1.60e-15 78.6
Msa1078570 AT2G04880.1 60.784 51 20 0 168 218 118 168 1.43e-14 75.5
Msa1078570 AT2G04880.1 53.125 64 29 1 154 216 300 363 3.89e-13 71.2
Msa1078570 AT1G29860.1 55.814 86 36 1 309 394 122 205 1.65e-25 105
Msa1078570 AT1G29860.1 60.377 53 20 1 165 216 140 192 2.00e-11 64.7
Msa1078570 AT4G18170.1 58.667 75 31 0 310 384 157 231 2.24e-25 105
Msa1078570 AT4G18170.1 58.491 53 21 1 165 216 176 228 4.52e-11 63.9
Msa1078570 AT5G46350.1 54.217 83 38 0 311 393 169 251 5.77e-25 104
Msa1078570 AT5G49520.1 59.459 74 28 1 312 385 210 281 1.00e-24 105
Msa1078570 AT2G47260.1 60.811 74 27 1 312 385 163 234 1.60e-24 103
Msa1078570 AT2G44745.1 51.087 92 43 2 299 390 120 209 9.08e-24 99.0
Msa1078570 AT2G44745.1 60.000 50 19 1 168 216 152 201 3.01e-11 63.2
Msa1078570 AT5G41570.1 60.563 71 28 0 311 381 84 154 1.06e-23 97.4
Msa1078570 AT1G55600.1 59.722 72 29 0 313 384 295 366 1.11e-23 103
Msa1078570 AT1G69310.4 51.899 79 38 0 304 382 126 204 1.77e-23 99.8
Msa1078570 AT1G69310.2 51.899 79 38 0 304 382 126 204 1.77e-23 99.8
Msa1078570 AT1G69310.1 51.899 79 38 0 304 382 126 204 1.77e-23 99.8
Msa1078570 AT1G64000.1 60.870 69 27 0 313 381 102 170 2.55e-23 97.1
Msa1078570 AT3G62340.1 62.687 67 23 1 321 385 112 178 2.31e-22 96.3
Msa1078570 AT4G39410.1 56.944 72 31 0 310 381 208 279 4.79e-22 95.9
Msa1078570 AT5G26170.1 53.623 69 32 0 313 381 101 169 9.50e-22 92.0
Msa1078570 AT4G04450.2 43.636 110 56 3 295 398 165 274 1.85e-21 96.3
Msa1078570 AT4G24240.1 53.750 80 35 2 317 395 273 351 2.23e-21 94.7
Msa1078570 AT4G24240.1 50.746 67 25 3 159 217 273 339 2.59e-11 65.1
Msa1078570 AT5G15130.2 51.282 78 37 1 313 389 173 250 3.52e-21 95.9
Msa1078570 AT5G15130.1 51.282 78 37 1 313 389 215 292 3.89e-21 95.9
Msa1078570 AT5G13080.1 53.333 75 33 1 315 389 57 129 4.12e-21 89.4
Msa1078570 AT5G13080.1 49.123 57 28 1 161 216 67 123 1.28e-11 62.8
Msa1078570 AT3G01080.3 65.000 60 21 0 168 227 212 271 4.53e-21 93.6
Msa1078570 AT3G01080.3 59.322 59 23 1 326 384 206 263 6.84e-16 78.6
Msa1078570 AT2G21900.1 51.429 70 33 1 316 384 99 168 5.43e-21 90.5
Msa1078570 AT4G04450.1 43.636 110 56 3 295 398 259 368 7.33e-21 95.1
Msa1078570 AT1G68150.1 37.226 137 80 3 262 393 168 303 7.64e-21 93.6
Msa1078570 AT2G46130.1 53.521 71 33 0 311 381 16 86 9.73e-21 87.0
Msa1078570 AT2G46130.1 54.386 57 25 1 161 216 30 86 1.18e-11 61.6
Msa1078570 AT3G01970.1 52.174 69 33 0 315 383 55 123 7.37e-20 85.9
Msa1078570 AT1G80840.1 37.500 120 65 3 266 384 96 206 1.81e-19 88.6
Msa1078570 AT4G01720.1 52.055 73 34 1 313 384 227 299 3.16e-19 89.7
Msa1078570 AT4G23550.1 45.783 83 44 1 314 395 129 211 4.57e-19 87.4
Msa1078570 AT1G69810.2 44.330 97 51 3 293 386 112 208 4.88e-19 87.8
Msa1078570 AT4G31800.2 48.235 85 43 1 316 399 102 186 6.20e-19 85.9
Msa1078570 AT2G23320.1 56.250 64 27 1 321 383 236 299 6.24e-19 87.4
Msa1078570 AT1G29280.1 44.762 105 49 3 287 389 42 139 7.11e-19 86.3
Msa1078570 AT1G62300.1 49.315 73 36 1 313 384 300 372 7.73e-19 89.0
Msa1078570 AT1G69810.1 44.000 100 53 3 290 386 167 266 8.98e-19 87.8
Msa1078570 AT4G22070.4 44.048 84 46 1 302 384 274 357 1.08e-18 88.6
Msa1078570 AT4G22070.3 44.048 84 46 1 302 384 274 357 1.08e-18 88.6
Msa1078570 AT4G22070.2 44.048 84 46 1 302 384 274 357 1.08e-18 88.6
Msa1078570 AT4G22070.1 44.048 84 46 1 302 384 274 357 1.08e-18 88.6
Msa1078570 AT4G31800.1 52.857 70 32 1 316 384 167 236 1.62e-18 85.9
Msa1078570 AT2G25000.2 53.846 65 29 1 321 384 99 163 1.74e-18 84.3
Msa1078570 AT2G25000.4 53.846 65 29 1 321 384 99 163 1.74e-18 84.3
Msa1078570 AT2G30590.1 53.731 67 29 2 326 390 314 380 1.85e-18 86.7
Msa1078570 AT1G18860.1 49.315 73 36 1 313 384 227 299 2.26e-18 87.4
Msa1078570 AT5G64810.1 57.377 61 26 0 322 382 107 167 2.38e-18 83.2
Msa1078570 AT5G28650.1 27.597 308 156 12 113 392 62 330 2.52e-18 85.9
Msa1078570 AT1G69310.3 46.835 79 38 1 304 382 126 200 3.58e-18 84.7
Msa1078570 AT2G25000.3 53.846 65 29 1 321 384 121 185 3.87e-18 84.0
Msa1078570 AT4G01250.1 57.353 68 27 2 319 384 121 188 4.21e-18 84.7
Msa1078570 AT2G25000.1 53.846 65 29 1 321 384 142 206 5.55e-18 84.0
Msa1078570 AT4G31550.2 51.613 62 29 1 321 381 241 302 5.60e-18 84.7
Msa1078570 AT4G31550.2 53.448 58 25 2 168 223 252 309 2.90e-11 64.7
Msa1078570 AT4G31550.1 51.613 62 29 1 321 381 242 303 5.61e-18 84.7
Msa1078570 AT4G31550.1 53.448 58 25 2 168 223 253 310 2.81e-11 64.7
Msa1078570 AT3G04670.1 52.941 68 31 1 326 392 263 330 7.31e-18 84.3
Msa1078570 AT5G43290.1 58.929 56 23 0 326 381 115 170 8.21e-18 83.2
Msa1078570 AT5G52830.1 43.878 98 39 2 288 384 143 225 1.08e-17 84.0
Msa1078570 AT5G52830.1 39.326 89 43 3 143 229 156 235 5.86e-11 63.9
Msa1078570 AT2G34830.1 53.425 73 32 2 314 384 203 275 7.34e-17 82.4
Msa1078570 AT3G58710.1 40.000 115 60 3 287 399 39 146 8.63e-17 80.5
Msa1078570 AT2G34830.2 53.425 73 32 2 314 384 212 284 9.11e-17 82.0
Msa1078570 AT2G24570.1 53.448 58 26 1 326 382 244 301 1.49e-16 80.5
Msa1078570 AT2G24570.1 48.529 68 33 2 168 233 250 317 1.10e-12 68.9
Msa1078570 AT1G30650.1 50.667 75 35 2 314 386 205 279 1.88e-16 81.3
Msa1078570 AT3G58710.2 41.071 112 57 3 290 399 41 145 1.99e-16 79.3
Msa1078570 AT5G45050.4 48.077 104 37 5 288 388 1017 1106 1.38e-15 79.3
Msa1078570 AT2G46130.2 47.887 71 33 1 311 381 16 82 1.45e-15 72.8
Msa1078570 AT5G45050.1 48.077 104 37 5 288 388 1156 1245 1.46e-15 79.3
Msa1078570 AT5G45050.2 48.077 104 37 5 288 388 1128 1217 1.59e-15 79.3
Msa1078570 AT1G66560.1 57.895 57 21 1 326 379 104 160 7.68e-15 74.3
Msa1078570 AT2G40740.1 31.707 164 81 5 219 379 95 230 2.87e-14 73.2
Msa1078570 AT2G40740.3 31.707 164 81 5 219 379 104 239 3.56e-14 73.2
Msa1078570 AT1G66550.1 40.625 96 46 3 289 379 76 165 6.31e-13 68.9
Msa1078570 AT1G66550.2 52.632 57 24 1 326 379 104 160 8.54e-13 68.2
Msa1078570 AT5G45260.1 31.618 136 73 4 269 401 1169 1287 7.92e-12 67.8
Msa1078570 AT1G80590.1 46.774 62 30 1 326 384 86 147 9.73e-12 65.1
Msa1078570 AT4G11070.2 54.386 57 23 1 326 379 110 166 1.41e-11 65.1
Msa1078570 AT4G11070.1 54.386 57 23 1 326 379 142 198 1.73e-11 65.1
Msa1078570 AT3G56400.1 43.077 65 34 1 318 379 113 177 4.02e-11 63.9
Msa1078570 AT4G23810.1 44.444 81 41 2 326 402 159 239 4.61e-11 63.9
Msa1078570 AT1G66600.1 49.153 59 27 1 324 379 102 160 6.39e-11 62.8
Msa1078570 AT5G01900.1 45.000 60 30 1 323 379 108 167 7.12e-11 62.8

Find 109 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTCAGTTTCATGCATTT+TGG 0.090215 7_2:-77573042 Msa1078570:five_prime_UTR
TCTTATAGATGGTGACAATT+TGG 0.209293 7_2:-77569104 Msa1078570:three_prime_UTR
GGCTTTCGCTGGAGGAAATA+TGG 0.218614 7_2:-77569818 Msa1078570:CDS
CAACAGTTGGTCTTGGAATT+TGG 0.227335 7_2:-77569027 Msa1078570:three_prime_UTR
GGCTTGAACCTCACTGTCTT+TGG 0.252094 7_2:+77572152 None:intergenic
TATGTAGTCACAAATGATTT+TGG 0.264303 7_2:+77569288 None:intergenic
GGATATAACTGGAGAAAATA+TGG 0.302862 7_2:-77570848 Msa1078570:intron
ATTGCAGAAATTGTTTATAA+AGG 0.309738 7_2:-77570722 Msa1078570:CDS
AATAAATAAAAGTGTCAATA+TGG 0.322332 7_2:+77569173 None:intergenic
TATGGACAGAAGCAAGTAAA+AGG 0.334183 7_2:-77570830 Msa1078570:CDS
CCTCACTGTCTTTGGCCTAA+TGG 0.341358 7_2:+77572160 None:intergenic
GATTGATTGGTATCAGGTTT+GGG 0.346071 7_2:+77571789 None:intergenic
AAAAGTATAAACCTGGGATA+TGG 0.347198 7_2:+77569773 None:intergenic
ATGAGAGATTGATTGGTATC+AGG 0.351230 7_2:+77571783 None:intergenic
AGATTGATTGGTATCAGGTT+TGG 0.354034 7_2:+77571788 None:intergenic
TCCATTGATTTCTGTGGTTG+TGG 0.361586 7_2:+77571058 None:intergenic
GCTTTGGATCCTCTTATAGA+TGG 0.369415 7_2:-77569115 Msa1078570:three_prime_UTR
GAATCAAAGCTGTCACTCTT+TGG 0.373481 7_2:-77573003 Msa1078570:five_prime_UTR
GTTATTATGACTAAATGCTT+TGG 0.374806 7_2:-77569131 Msa1078570:three_prime_UTR
TTGCCAAACCAGTTGCTTCA+AGG 0.393390 7_2:-77572277 Msa1078570:CDS
AGACAGAAAATGAATGGAAA+AGG 0.408346 7_2:+77573257 None:intergenic
GTAGTTTGAGAAGATGCAAT+TGG 0.426919 7_2:+77572191 None:intergenic
AGGCCTTGAAGCAACTGGTT+TGG 0.438001 7_2:+77572274 None:intergenic
GAAAATTCTTGTGGTCTAAG+TGG 0.439008 7_2:-77570521 Msa1078570:CDS
TTTGTAAATGAGAGATTGAT+TGG 0.444415 7_2:+77571776 None:intergenic
CAAGTAGGCCTTGAAGCAAC+TGG 0.450411 7_2:+77572269 None:intergenic
CCTTCCTACAGAAACATATC+AGG 0.450501 7_2:-77570963 Msa1078570:CDS
AAACTACAATATCCGCCATT+AGG 0.452468 7_2:-77572175 Msa1078570:CDS
AGTTGTCATGGTTAAGATGC+TGG 0.454295 7_2:+77571026 None:intergenic
CGAAACTCGGGAGCAACATC+AGG 0.455548 7_2:-77570665 Msa1078570:CDS
AATAGCATTAAAATTATTGA+AGG 0.460247 7_2:+77568955 None:intergenic
TCCTTGGAGATGGCTTTCGC+TGG 0.465481 7_2:-77569829 Msa1078570:CDS
TTTGATGTTGTTGCTTTCCA+TGG 0.466974 7_2:+77570690 None:intergenic
TTGATGACAACAGTTGGTCT+TGG 0.468035 7_2:-77569034 Msa1078570:three_prime_UTR
GAACTTTGCATTACAATGCC+TGG 0.474338 7_2:+77569866 None:intergenic
TGTTCTTGAGTGGCATCTCA+TGG 0.484881 7_2:+77569250 None:intergenic
AATCAGAATGAAAGGAATGA+AGG 0.486904 7_2:-77570593 Msa1078570:intron
GGAAGGAAGCAAAGGATTTG+AGG 0.487549 7_2:-77570489 Msa1078570:CDS
AAAGTTGAAAGATCATTAGA+TGG 0.489403 7_2:-77570749 Msa1078570:CDS
CTAACCAGACAGAAAATGAA+TGG 0.490237 7_2:+77573251 None:intergenic
AAAATTCTTGTGGTCTAAGT+GGG 0.492248 7_2:-77570520 Msa1078570:CDS
AGGTCTATCAGCATTATTTG+TGG 0.494075 7_2:+77570880 None:intergenic
ATATGGGCAGAAGGTGGTGA+AGG 0.494098 7_2:-77569801 Msa1078570:CDS
AAATTGTCACCATCTATAAG+AGG 0.505697 7_2:+77569106 None:intergenic
GAGGAAGGTTTAGTAGAGCC+AGG 0.508048 7_2:-77569884 Msa1078570:CDS
GCTTTCGCTGGAGGAAATAT+GGG 0.508332 7_2:-77569817 Msa1078570:CDS
GTGCACTTGTAGTAACTTCG+AGG 0.512042 7_2:+77570797 None:intergenic
GACAGAAAATGAATGGAAAA+GGG 0.512758 7_2:+77573258 None:intergenic
CAACATTTGATGACAACAGT+TGG 0.513978 7_2:-77569040 Msa1078570:three_prime_UTR
ATGGTTAAGATGCTGGGGAT+TGG 0.515953 7_2:+77571033 None:intergenic
TTGGTCTTGGAATTTGGTGT+TGG 0.516413 7_2:-77569021 Msa1078570:three_prime_UTR
AGAAGATGCAATTGGAGGAG+TGG 0.518935 7_2:+77572199 None:intergenic
GATTCTGAAGTCCTTGGAGA+TGG 0.520543 7_2:-77569839 Msa1078570:CDS
ACAGACAACTGTATCTCTCT+TGG 0.520560 7_2:-77571733 Msa1078570:CDS
AGGAATGATTTCTGATGGAA+TGG 0.520627 7_2:-77570645 Msa1078570:CDS
CTAAGTGGGGAATGTGAGGA+AGG 0.529724 7_2:-77570506 Msa1078570:CDS
TCTTTCTCAGAGCTTCTAGC+AGG 0.530251 7_2:-77572233 Msa1078570:CDS
TCATTTGTGACTACATATGA+AGG 0.531295 7_2:-77569282 Msa1078570:CDS
GTTGTCATGGTTAAGATGCT+GGG 0.534264 7_2:+77571027 None:intergenic
GTTTGAGAAGATGCAATTGG+AGG 0.534896 7_2:+77572194 None:intergenic
GTAAATATCCTAGTCTCTGT+AGG 0.538953 7_2:+77569072 None:intergenic
GTGGCCTGATATGTTTCTGT+AGG 0.540476 7_2:+77570959 None:intergenic
CATTGTAATGCAAAGTTCTG+TGG 0.543269 7_2:-77569861 Msa1078570:CDS
TCTGTGGATTCTGAAGTCCT+TGG 0.545629 7_2:-77569845 Msa1078570:CDS
ACAACATCAAAAGCGAAACT+CGG 0.546405 7_2:-77570678 Msa1078570:CDS
CAACATCAAAAGCGAAACTC+GGG 0.546522 7_2:-77570677 Msa1078570:CDS
TGGTCCTCCTCCATGTTCTG+TGG 0.546595 7_2:+77570917 None:intergenic
ATAATAGTAATCAGAATGAA+AGG 0.547394 7_2:-77570601 Msa1078570:intron
TGAGAATCAATCAAATGAAG+TGG 0.547618 7_2:-77569915 Msa1078570:CDS
ATTGTTGTTGTGTTCTTGAG+TGG 0.548207 7_2:+77569240 None:intergenic
TTGGAGATGGCTTTCGCTGG+AGG 0.549285 7_2:-77569826 Msa1078570:CDS
TTGGTCTCCATTGATTTCTG+TGG 0.552337 7_2:+77571052 None:intergenic
CCTGATATGTTTCTGTAGGA+AGG 0.552344 7_2:+77570963 None:intergenic
TACGATGGCACCACAGAACA+TGG 0.559539 7_2:-77570927 Msa1078570:CDS
TGTTAGCTCTAAAGTTGTCA+TGG 0.561387 7_2:+77571014 None:intergenic
GCCACAACCACAGAAATCAA+TGG 0.564697 7_2:-77571059 Msa1078570:CDS
CTATCAGCATTATTTGTGGA+TGG 0.565274 7_2:+77570884 None:intergenic
CGAAACATAGCAGTTCATGA+TGG 0.570030 7_2:-77572327 Msa1078570:intron
TTTGCTCTAGAAAATTCTTG+TGG 0.572340 7_2:-77570530 Msa1078570:CDS
ACATCAGGAATGATTTCTGA+TGG 0.574578 7_2:-77570650 Msa1078570:CDS
CTGATATGTTTCTGTAGGAA+GGG 0.576441 7_2:+77570964 None:intergenic
AAGCAAAGGATTTGAGGCAG+AGG 0.578305 7_2:-77570483 Msa1078570:CDS
TGTATCTCTCTTGGCAAACA+TGG 0.578873 7_2:-77571724 Msa1078570:intron
AAATGAAGTGGCAGTATCAG+AGG 0.580061 7_2:-77569903 Msa1078570:CDS
ATCTCTCATTTACAAACCAA+TGG 0.583964 7_2:-77571769 Msa1078570:CDS
TTAAAATTATTGAAGGACAA+TGG 0.592124 7_2:+77568962 None:intergenic
ACTTAGCAGCTCTTCTGACA+TGG 0.600508 7_2:-77571814 Msa1078570:intron
ATGACCCTAGAAGTAAAAGA+AGG 0.603029 7_2:-77570457 Msa1078570:intron
CTGGAGGAAATATGGGCAGA+AGG 0.603595 7_2:-77569810 Msa1078570:CDS
GGCCACAGAATCTTGTACGA+TGG 0.604701 7_2:-77570942 Msa1078570:CDS
CTGCAATGTTCGCAAGCACG+TGG 0.606464 7_2:-77569328 Msa1078570:CDS
TGAAGGGAAATCCATATCCC+AGG 0.606812 7_2:-77569784 Msa1078570:intron
CACTGTCTTTGGCCTAATGG+CGG 0.608617 7_2:+77572163 None:intergenic
TATGGGCAGAAGGTGGTGAA+GGG 0.615897 7_2:-77569800 Msa1078570:CDS
GAATGTGAGGAAGGAAGCAA+AGG 0.620452 7_2:-77570497 Msa1078570:CDS
TGCCATCGTACAAGATTCTG+TGG 0.625393 7_2:+77570940 None:intergenic
GGCACCACAGAACATGGAGG+AGG 0.626068 7_2:-77570921 Msa1078570:CDS
TTGTCATGGTTAAGATGCTG+GGG 0.628493 7_2:+77571028 None:intergenic
ATGTAGTACCTACAGAGACT+AGG 0.628919 7_2:-77569080 Msa1078570:three_prime_UTR
TCCAGCGAAAGCCATCTCCA+AGG 0.633371 7_2:+77569828 None:intergenic
GAAGTGGCAGTATCAGAGGA+AGG 0.639135 7_2:-77569899 Msa1078570:CDS
TATAAAGGTGAACACAACCA+TGG 0.664705 7_2:-77570707 Msa1078570:CDS
GAGGAAATATGGGCAGAAGG+TGG 0.666250 7_2:-77569807 Msa1078570:CDS
TGGTCTAAGTGGGGAATGTG+AGG 0.674654 7_2:-77570510 Msa1078570:CDS
AAATTATTGAAGGACAATGG+TGG 0.675330 7_2:+77568965 None:intergenic
AAATTCTTGTGGTCTAAGTG+GGG 0.680578 7_2:-77570519 Msa1078570:CDS
GATTTGTATGAAGAACAAGT+AGG 0.690839 7_2:+77572254 None:intergenic
CCATTAGGCCAAAGACAGTG+AGG 0.725022 7_2:-77572160 Msa1078570:intron
GATGGCACCACAGAACATGG+AGG 0.771341 7_2:-77570924 Msa1078570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATGAAAAC+TGG + chr7_2:77572020-77572039 None:intergenic 10.0%
!!! GATTTTTAATTTTAATTCAT+TGG - chr7_2:77572109-77572128 Msa1078570:intron 10.0%
!!! CATGATAAATTTTTAATTAA+AGG - chr7_2:77572230-77572249 Msa1078570:CDS 10.0%
!!! AGCATTTTTTGAATTTTTTA+TGG - chr7_2:77569077-77569096 Msa1078570:three_prime_UTR 15.0%
!! TTTATGGTTATATATATTGT+AGG - chr7_2:77569093-77569112 Msa1078570:three_prime_UTR 15.0%
!!! TACTTGAATTTTGTTTTTTT+AGG - chr7_2:77569500-77569519 Msa1078570:intron 15.0%
!!! GTTTCTTTTTATTTATTTTC+AGG + chr7_2:77571799-77571818 None:intergenic 15.0%
!! TTTATCATGAAAAATTAGTT+AGG + chr7_2:77572219-77572238 None:intergenic 15.0%
!!! AATAAATAAAAGTGTCAATA+TGG + chr7_2:77573036-77573055 None:intergenic 15.0%
!! AATAGCATTAAAATTATTGA+AGG + chr7_2:77573254-77573273 None:intergenic 15.0%
!!! TTTTTTATGCTTTGGTTATT+AGG - chr7_2:77569371-77569390 Msa1078570:intron 20.0%
!! TTATCTCACAAATCAATAAA+TGG + chr7_2:77569555-77569574 None:intergenic 20.0%
!! TTAATATAAACAGTTGCATT+AGG - chr7_2:77569723-77569742 Msa1078570:intron 20.0%
!! CAAACACAAAGATTTAATAA+TGG + chr7_2:77569751-77569770 None:intergenic 20.0%
!!! CAATGTTTTAAAAACCAAAT+CGG + chr7_2:77570292-77570311 None:intergenic 20.0%
!!! TACTATTTTAAAATGCTTCT+TGG - chr7_2:77570315-77570334 Msa1078570:intron 20.0%
!! AAGATTAACATTATATGTGA+GGG - chr7_2:77570717-77570736 Msa1078570:CDS 20.0%
!!! AAACCTATCATAGATTTTTT+TGG - chr7_2:77570808-77570827 Msa1078570:CDS 20.0%
!! ATATAAACGATGTTTATAAG+TGG - chr7_2:77570909-77570928 Msa1078570:CDS 20.0%
!! TATAAACGATGTTTATAAGT+GGG - chr7_2:77570910-77570929 Msa1078570:CDS 20.0%
!! ATTGCAGAAATTGTTTATAA+AGG - chr7_2:77571484-77571503 Msa1078570:intron 20.0%
!! ATAATAGTAATCAGAATGAA+AGG - chr7_2:77571605-77571624 Msa1078570:intron 20.0%
!! TATTTGTGACATAATTTCTT+CGG - chr7_2:77572133-77572152 Msa1078570:intron 20.0%
!! GTAACATATTAGTGATTATA+AGG - chr7_2:77572191-77572210 Msa1078570:CDS 20.0%
!! TTAAAAGTTTCTCATTCTTT+AGG - chr7_2:77572263-77572282 Msa1078570:CDS 20.0%
!! TTATAATTTCAGAGACAAAA+AGG + chr7_2:77572631-77572650 None:intergenic 20.0%
!!! AACTTAACTGATAAATGTTT+TGG + chr7_2:77572662-77572681 None:intergenic 20.0%
!! AGTATAAAGAAAAAGATACT+AGG + chr7_2:77572786-77572805 None:intergenic 20.0%
!! TTAAAATTATTGAAGGACAA+TGG + chr7_2:77573247-77573266 None:intergenic 20.0%
! TAAAAAAAGAGAAGTGGTTA+TGG + chr7_2:77569358-77569377 None:intergenic 25.0%
! AAAGCATAAAAAAAGAGAAG+TGG + chr7_2:77569364-77569383 None:intergenic 25.0%
!!! ACTTCTCTTTTTTTATGCTT+TGG - chr7_2:77569363-77569382 Msa1078570:intron 25.0%
!!! TCAAGTAGACCATTTTTTAA+TGG + chr7_2:77569487-77569506 None:intergenic 25.0%
! ATTTGTGAGATAATGATACA+GGG - chr7_2:77569562-77569581 Msa1078570:intron 25.0%
!! AATCGTTTAAAGCTATATCT+AGG - chr7_2:77569624-77569643 Msa1078570:intron 25.0%
!! ATCGTTTAAAGCTATATCTA+GGG - chr7_2:77569625-77569644 Msa1078570:intron 25.0%
! GATTTATACTTATCAATGGT+AGG + chr7_2:77569810-77569829 None:intergenic 25.0%
! AAGGGATTTATACTTATCAA+TGG + chr7_2:77569814-77569833 None:intergenic 25.0%
!!! GTTTTTAAAACACTGCATTA+TGG + chr7_2:77570126-77570145 None:intergenic 25.0%
!! CAAAAATATTAGCCTGTAAT+TGG + chr7_2:77570365-77570384 None:intergenic 25.0%
!! CAATTACAGGCTAATATTTT+TGG - chr7_2:77570363-77570382 Msa1078570:intron 25.0%
! TTTGTAAATGAGAGATTGAT+TGG + chr7_2:77570433-77570452 None:intergenic 25.0%
! ACAAACGAAGGATTATATAT+AGG + chr7_2:77570600-77570619 None:intergenic 25.0%
! AATGATGAGTTTATTCAGAA+AGG - chr7_2:77570646-77570665 Msa1078570:CDS 25.0%
! CAAGATTAACATTATATGTG+AGG - chr7_2:77570716-77570735 Msa1078570:CDS 25.0%
!! ATTAGCTTATAGAGTTAAGT+TGG - chr7_2:77570756-77570775 Msa1078570:CDS 25.0%
! TTAGCTTATAGAGTTAAGTT+GGG - chr7_2:77570757-77570776 Msa1078570:CDS 25.0%
! ATAAACGATGTTTATAAGTG+GGG - chr7_2:77570911-77570930 Msa1078570:CDS 25.0%
!! TACCTCTTTTTATCTTCTTT+TGG - chr7_2:77571099-77571118 Msa1078570:intron 25.0%
!!! TTTTTATCTTCTTTTGGAGA+AGG - chr7_2:77571105-77571124 Msa1078570:intron 25.0%
!!! TTTTATCTTCTTTTGGAGAA+GGG - chr7_2:77571106-77571125 Msa1078570:intron 25.0%
!!! TTCTTTTTAACTGGACAATT+AGG + chr7_2:77571439-77571458 None:intergenic 25.0%
!! CTTTCAACTTTCTTTTTAAC+TGG + chr7_2:77571448-77571467 None:intergenic 25.0%
! AAAGTTGAAAGATCATTAGA+TGG - chr7_2:77571457-77571476 Msa1078570:intron 25.0%
!!! TTTTCTAGAGCAAAATCATT+AGG + chr7_2:77571670-77571689 None:intergenic 25.0%
!! ATAACCTTCTTTTACTTCTA+GGG + chr7_2:77571756-77571775 None:intergenic 25.0%
!! AATAACCTTCTTTTACTTCT+AGG + chr7_2:77571757-77571776 None:intergenic 25.0%
! ATTTGCAATGTTTCAAAAAC+TGG - chr7_2:77571895-77571914 Msa1078570:intron 25.0%
! ATCACTAATATGTTACTGTA+TGG + chr7_2:77572187-77572206 None:intergenic 25.0%
!! AAGAAGAAAAGTATAAACCT+GGG + chr7_2:77572442-77572461 None:intergenic 25.0%
!! TTAGGTACTAATTTTACAGA+TGG + chr7_2:77572594-77572613 None:intergenic 25.0%
!!! TTGTCTCTGAAATTATAACA+TGG - chr7_2:77572633-77572652 Msa1078570:intron 25.0%
! AGTTAAGTTCAATTGTTAGA+TGG - chr7_2:77572673-77572692 Msa1078570:intron 25.0%
!! TATGTAGTCACAAATGATTT+TGG + chr7_2:77572921-77572940 None:intergenic 25.0%
! GTTATTATGACTAAATGCTT+TGG - chr7_2:77573075-77573094 Msa1078570:intron 25.0%
! TTTTCCATTCATTTTCTGTC+TGG - chr7_2:77568951-77568970 Msa1078570:three_prime_UTR 30.0%
TGAAATCTATAATTGGGCTT+GGG + chr7_2:77569054-77569073 None:intergenic 30.0%
ATGAAATCTATAATTGGGCT+TGG + chr7_2:77569055-77569074 None:intergenic 30.0%
AAGCCCAATTATAGATTTCA+TGG - chr7_2:77569054-77569073 Msa1078570:three_prime_UTR 30.0%
GCTCCATGAAATCTATAATT+GGG + chr7_2:77569060-77569079 None:intergenic 30.0%
TGCTCCATGAAATCTATAAT+TGG + chr7_2:77569061-77569080 None:intergenic 30.0%
! TAACTCAGTTTCATGCATTT+TGG - chr7_2:77569164-77569183 Msa1078570:three_prime_UTR 30.0%
! AACTCAGTTTCATGCATTTT+GGG - chr7_2:77569165-77569184 Msa1078570:three_prime_UTR 30.0%
!! GTTAAGTTAGAGCTTTTTCT+TGG - chr7_2:77569229-77569248 Msa1078570:CDS 30.0%
ATCAAACATGCACGATAATT+AGG + chr7_2:77569279-77569298 None:intergenic 30.0%
AAGACCTCACCATTAAAAAA+TGG - chr7_2:77569475-77569494 Msa1078570:intron 30.0%
!!! TAGACCATTTTTTAATGGTG+AGG + chr7_2:77569482-77569501 None:intergenic 30.0%
GATTTGTGAGATAATGATAC+AGG - chr7_2:77569561-77569580 Msa1078570:intron 30.0%
TAACTTAATCCTTCCCATTA+AGG + chr7_2:77569604-77569623 None:intergenic 30.0%
CAACAACTCAAAGTTTCAAA+GGG + chr7_2:77569697-77569716 None:intergenic 30.0%
TCAACAACTCAAAGTTTCAA+AGG + chr7_2:77569698-77569717 None:intergenic 30.0%
TATACTTATCAATGGTAGGT+AGG + chr7_2:77569806-77569825 None:intergenic 30.0%
!!! AATCCCTTGTTAGTTTTTGA+AGG - chr7_2:77569826-77569845 Msa1078570:CDS 30.0%
TCACCTTCAAAAACTAACAA+GGG + chr7_2:77569832-77569851 None:intergenic 30.0%
TTCACCTTCAAAAACTAACA+AGG + chr7_2:77569833-77569852 None:intergenic 30.0%
GATTTGTATGAAGAACAAGT+AGG + chr7_2:77569955-77569974 None:intergenic 30.0%
!! GTTGTGTTTTTACCAATTAC+AGG - chr7_2:77570350-77570369 Msa1078570:intron 30.0%
!!! TTACAGGCTAATATTTTTGG+AGG - chr7_2:77570366-77570385 Msa1078570:intron 30.0%
ATCTCTCATTTACAAACCAA+TGG - chr7_2:77570437-77570456 Msa1078570:intron 30.0%
ACGAAAAAGATTACAAACGA+AGG + chr7_2:77570612-77570631 None:intergenic 30.0%
TAAACTCATCATTGATCACT+TGG + chr7_2:77570639-77570658 None:intergenic 30.0%
AGAAAGGTTATTCTTCATAG+TGG - chr7_2:77570662-77570681 Msa1078570:CDS 30.0%
GGTCCAAAAAAATCTATGAT+AGG + chr7_2:77570814-77570833 None:intergenic 30.0%
TAAACGATGTTTATAAGTGG+GGG - chr7_2:77570912-77570931 Msa1078570:CDS 30.0%
TGGAAATTTCCGTTAGAATT+TGG + chr7_2:77570988-77571007 None:intergenic 30.0%
!!! ATATAGCGGATGATGTTTTT+TGG + chr7_2:77571008-77571027 None:intergenic 30.0%
AGTCACTAACACAAATATAG+CGG + chr7_2:77571022-77571041 None:intergenic 30.0%
!! TCTCTTTTCAATTTGAGACT+TGG - chr7_2:77571061-77571080 Msa1078570:CDS 30.0%
CTCCAAAAGAAGATAAAAAG+AGG + chr7_2:77571104-77571123 None:intergenic 30.0%
GGATATAACTGGAGAAAATA+TGG - chr7_2:77571358-77571377 Msa1078570:intron 30.0%
GAATGGTTCAAGATAAAGTA+TGG - chr7_2:77571578-77571597 Msa1078570:intron 30.0%
AATCAGAATGAAAGGAATGA+AGG - chr7_2:77571613-77571632 Msa1078570:intron 30.0%
!! TTTGCTCTAGAAAATTCTTG+TGG - chr7_2:77571676-77571695 Msa1078570:intron 30.0%
AAAATTCTTGTGGTCTAAGT+GGG - chr7_2:77571686-77571705 Msa1078570:intron 30.0%
TCAATGAAACATCCAAATCA+TGG + chr7_2:77572074-77572093 None:intergenic 30.0%
TGAGAATCAATCAAATGAAG+TGG - chr7_2:77572291-77572310 Msa1078570:CDS 30.0%
! AAAAGTATAAACCTGGGATA+TGG + chr7_2:77572436-77572455 None:intergenic 30.0%
! GAAGAAGAAAAGTATAAACC+TGG + chr7_2:77572443-77572462 None:intergenic 30.0%
TCAAGATTACTTATACAGCA+AGG - chr7_2:77572497-77572516 Msa1078570:intron 30.0%
TTCTAAATTCTGCTATGCAT+CGG - chr7_2:77572520-77572539 Msa1078570:intron 30.0%
! AAGGCTAATTTGCAAAAGTT+AGG + chr7_2:77572612-77572631 None:intergenic 30.0%
TCATTTGTGACTACATATGA+AGG - chr7_2:77572924-77572943 Msa1078570:intron 30.0%
!!! AGTCATTGAATCTTTTTCAG+AGG + chr7_2:77572994-77573013 None:intergenic 30.0%
AAATTGTCACCATCTATAAG+AGG + chr7_2:77573103-77573122 None:intergenic 30.0%
TCTTATAGATGGTGACAATT+TGG - chr7_2:77573102-77573121 Msa1078570:intron 30.0%
AAATTATTGAAGGACAATGG+TGG + chr7_2:77573244-77573263 None:intergenic 30.0%
CTAACCAGACAGAAAATGAA+TGG + chr7_2:77568958-77568977 None:intergenic 35.0%
!!! TATTTTGACCCTTGTAATGC+AGG - chr7_2:77569130-77569149 Msa1078570:three_prime_UTR 35.0%
ATCGTGCATGTTTGATATCA+CGG - chr7_2:77569283-77569302 Msa1078570:CDS 35.0%
TGGTTATGGATATGCATGTT+TGG + chr7_2:77569344-77569363 None:intergenic 35.0%
CTTTGGTTATTAGGCTTTCA+AGG - chr7_2:77569380-77569399 Msa1078570:intron 35.0%
! CTGCTAAAAAGTTCCCTTTT+TGG - chr7_2:77569412-77569431 Msa1078570:intron 35.0%
! CTAAAAAGTTCCCTTTTTGG+CGG - chr7_2:77569415-77569434 Msa1078570:intron 35.0%
!! TAAAAAGTTCCCTTTTTGGC+GGG - chr7_2:77569416-77569435 Msa1078570:intron 35.0%
AATGCTAACACATGCCTTAA+TGG - chr7_2:77569587-77569606 Msa1078570:intron 35.0%
ATGCTAACACATGCCTTAAT+GGG - chr7_2:77569588-77569607 Msa1078570:intron 35.0%
GTAGTTTGAGAAGATGCAAT+TGG + chr7_2:77570018-77570037 None:intergenic 35.0%
AAACTACAATATCCGCCATT+AGG - chr7_2:77570031-77570050 Msa1078570:intron 35.0%
ATCAGTTGGAACTTTCAGTT+CGG + chr7_2:77570148-77570167 None:intergenic 35.0%
AAATAACCACACCGTAGTAA+TGG + chr7_2:77570186-77570205 None:intergenic 35.0%
! TTACTACGGTGTGGTTATTT+TGG - chr7_2:77570186-77570205 Msa1078570:intron 35.0%
GATTGATTGGTATCAGGTTT+GGG + chr7_2:77570420-77570439 None:intergenic 35.0%
AGATTGATTGGTATCAGGTT+TGG + chr7_2:77570421-77570440 None:intergenic 35.0%
ATGAGAGATTGATTGGTATC+AGG + chr7_2:77570426-77570445 None:intergenic 35.0%
! TGTGACACAAATTTTGCCAT+TGG + chr7_2:77570456-77570475 None:intergenic 35.0%
!!! TCATAGTGGATGTTTTGAGA+TGG - chr7_2:77570676-77570695 Msa1078570:CDS 35.0%
AAACGATGTTTATAAGTGGG+GGG - chr7_2:77570913-77570932 Msa1078570:CDS 35.0%
TTTCCGTTAGAATTTGGTCT+TGG + chr7_2:77570982-77571001 None:intergenic 35.0%
!! TGTTAGCTCTAAAGTTGTCA+TGG + chr7_2:77571195-77571214 None:intergenic 35.0%
! CTGATATGTTTCTGTAGGAA+GGG + chr7_2:77571245-77571264 None:intergenic 35.0%
!! TTGTGGATGGTAATGCTTTT+TGG + chr7_2:77571312-77571331 None:intergenic 35.0%
CTATCAGCATTATTTGTGGA+TGG + chr7_2:77571325-77571344 None:intergenic 35.0%
AGGTCTATCAGCATTATTTG+TGG + chr7_2:77571329-77571348 None:intergenic 35.0%
CAGTTATATCCATCATACGA+AGG + chr7_2:77571349-77571368 None:intergenic 35.0%
!! CTTCGTATGATGGATATAAC+TGG - chr7_2:77571347-77571366 Msa1078570:intron 35.0%
TATGGACAGAAGCAAGTAAA+AGG - chr7_2:77571376-77571395 Msa1078570:intron 35.0%
TATAAAGGTGAACACAACCA+TGG - chr7_2:77571499-77571518 Msa1078570:intron 35.0%
!! TTTGATGTTGTTGCTTTCCA+TGG + chr7_2:77571519-77571538 None:intergenic 35.0%
ACAACATCAAAAGCGAAACT+CGG - chr7_2:77571528-77571547 Msa1078570:intron 35.0%
ACATCAGGAATGATTTCTGA+TGG - chr7_2:77571556-77571575 Msa1078570:intron 35.0%
AGGAATGATTTCTGATGGAA+TGG - chr7_2:77571561-77571580 Msa1078570:intron 35.0%
GAAAATTCTTGTGGTCTAAG+TGG - chr7_2:77571685-77571704 Msa1078570:intron 35.0%
AAATTCTTGTGGTCTAAGTG+GGG - chr7_2:77571687-77571706 Msa1078570:intron 35.0%
ATGACCCTAGAAGTAAAAGA+AGG - chr7_2:77571749-77571768 Msa1078570:CDS 35.0%
ACAGAGAAGAAAAACACACT+AGG - chr7_2:77571817-77571836 Msa1078570:intron 35.0%
CATTGTAATGCAAAGTTCTG+TGG - chr7_2:77572345-77572364 Msa1078570:intron 35.0%
! GCCTATGTACTCGATATTTT+GGG + chr7_2:77572546-77572565 None:intergenic 35.0%
CAAAATATCGAGTACATAGG+CGG - chr7_2:77572545-77572564 Msa1078570:intron 35.0%
TTACAGATGGCTACAATTTC+AGG + chr7_2:77572581-77572600 None:intergenic 35.0%
! ATTGTTGTTGTGTTCTTGAG+TGG + chr7_2:77572969-77572988 None:intergenic 35.0%
GTAAATATCCTAGTCTCTGT+AGG + chr7_2:77573137-77573156 None:intergenic 35.0%
! CAACATTTGATGACAACAGT+TGG - chr7_2:77573166-77573185 Msa1078570:intron 35.0%
TAACCTCTCCTGCATTACAA+GGG + chr7_2:77569141-77569160 None:intergenic 40.0%
TTAACCTCTCCTGCATTACA+AGG + chr7_2:77569142-77569161 None:intergenic 40.0%
GAATCAAAGCTGTCACTCTT+TGG - chr7_2:77569203-77569222 Msa1078570:CDS 40.0%
!! AAAAAGTTCCCTTTTTGGCG+GGG - chr7_2:77569417-77569436 Msa1078570:intron 40.0%
GTTCGTTCCAAAGACATGAA+AGG + chr7_2:77569531-77569550 None:intergenic 40.0%
TAACACATGCCTTAATGGGA+AGG - chr7_2:77569592-77569611 Msa1078570:intron 40.0%
GCTATATCTAGGGATACACT+AGG - chr7_2:77569635-77569654 Msa1078570:intron 40.0%
CGAAACATAGCAGTTCATGA+TGG - chr7_2:77569879-77569898 Msa1078570:CDS 40.0%
GTTTGAGAAGATGCAATTGG+AGG + chr7_2:77570015-77570034 None:intergenic 40.0%
ACTGAATGTTCACCTGAGAA+GGG + chr7_2:77570095-77570114 None:intergenic 40.0%
CCAACTGATTGAACCTTGAA+CGG - chr7_2:77570159-77570178 Msa1078570:intron 40.0%
!!! TAGTTTTGTCTCGATTCGAG+CGG - chr7_2:77570220-77570239 Msa1078570:intron 40.0%
ACAGACAACTGTATCTCTCT+TGG - chr7_2:77570473-77570492 Msa1078570:CDS 40.0%
TGTATCTCTCTTGGCAAACA+TGG - chr7_2:77570482-77570501 Msa1078570:CDS 40.0%
! TTTACGCTCCAGATGTGTTT+TGG - chr7_2:77570860-77570879 Msa1078570:intron 40.0%
!! TGTTTTGGACGTGAGCATAT+TGG - chr7_2:77570875-77570894 Msa1078570:intron 40.0%
TTAACCTCAGAAGTTAGCTC+GGG + chr7_2:77570952-77570971 None:intergenic 40.0%
CTTAACCTCAGAAGTTAGCT+CGG + chr7_2:77570953-77570972 None:intergenic 40.0%
GCTCCAAGACCAAATTCTAA+CGG - chr7_2:77570976-77570995 Msa1078570:CDS 40.0%
!! TCCATTGATTTCTGTGGTTG+TGG + chr7_2:77571151-77571170 None:intergenic 40.0%
!! TTGGTCTCCATTGATTTCTG+TGG + chr7_2:77571157-77571176 None:intergenic 40.0%
TTGTCATGGTTAAGATGCTG+GGG + chr7_2:77571181-77571200 None:intergenic 40.0%
GTTGTCATGGTTAAGATGCT+GGG + chr7_2:77571182-77571201 None:intergenic 40.0%
AGTTGTCATGGTTAAGATGC+TGG + chr7_2:77571183-77571202 None:intergenic 40.0%
! CCTGATATGTTTCTGTAGGA+AGG + chr7_2:77571246-77571265 None:intergenic 40.0%
CCTTCCTACAGAAACATATC+AGG - chr7_2:77571243-77571262 Msa1078570:intron 40.0%
CAACATCAAAAGCGAAACTC+GGG - chr7_2:77571529-77571548 Msa1078570:intron 40.0%
AACGAAACCAATCAACGAAC+TGG + chr7_2:77571951-77571970 None:intergenic 40.0%
!! TTCGTTGATTGGTTTCGTTC+CGG - chr7_2:77571952-77571971 Msa1078570:intron 40.0%
CAACCAGACTATAGTATACC+CGG + chr7_2:77571974-77571993 None:intergenic 40.0%
CATCCAGTTCAACCATGATT+TGG - chr7_2:77572059-77572078 Msa1078570:intron 40.0%
CATCCAAATCATGGTTGAAC+TGG + chr7_2:77572065-77572084 None:intergenic 40.0%
AAATGAAGTGGCAGTATCAG+AGG - chr7_2:77572303-77572322 Msa1078570:CDS 40.0%
GAACTTTGCATTACAATGCC+TGG + chr7_2:77572343-77572362 None:intergenic 40.0%
GCCCAAAATATCGAGTACAT+AGG - chr7_2:77572542-77572561 Msa1078570:intron 40.0%
! CGCCTATGTACTCGATATTT+TGG + chr7_2:77572547-77572566 None:intergenic 40.0%
TGACACATTGAATGAAGACG+CGG - chr7_2:77572703-77572722 Msa1078570:intron 40.0%
! GCTTTGGATCCTCTTATAGA+TGG - chr7_2:77573091-77573110 Msa1078570:intron 40.0%
ATGTAGTACCTACAGAGACT+AGG - chr7_2:77573126-77573145 Msa1078570:intron 40.0%
! TTGATGACAACAGTTGGTCT+TGG - chr7_2:77573172-77573191 Msa1078570:intron 40.0%
!! CAACAGTTGGTCTTGGAATT+TGG - chr7_2:77573179-77573198 Msa1078570:intron 40.0%
!! TTGGTCTTGGAATTTGGTGT+TGG - chr7_2:77573185-77573204 Msa1078570:intron 40.0%
TGGGAGTTGAGAGAGTAAGA+GGG + chr7_2:77569035-77569054 None:intergenic 45.0%
TTGGGAGTTGAGAGAGTAAG+AGG + chr7_2:77569036-77569055 None:intergenic 45.0%
!! GCTTTTTCTTGGCTTTCTGC+AGG - chr7_2:77569240-77569259 Msa1078570:CDS 45.0%
GTGCATGTTTGATATCACGG+TGG - chr7_2:77569286-77569305 Msa1078570:CDS 45.0%
ATTGTAGTCCCCGCCAAAAA+GGG + chr7_2:77569428-77569447 None:intergenic 45.0%
TATTGTAGTCCCCGCCAAAA+AGG + chr7_2:77569429-77569448 None:intergenic 45.0%
GGCTCATCCTTTCATGTCTT+TGG - chr7_2:77569521-77569540 Msa1078570:intron 45.0%
TTGCCAAACCAGTTGCTTCA+AGG - chr7_2:77569929-77569948 Msa1078570:intron 45.0%
TCTTTCTCAGAGCTTCTAGC+AGG - chr7_2:77569973-77569992 Msa1078570:intron 45.0%
AGAAGATGCAATTGGAGGAG+TGG + chr7_2:77570010-77570029 None:intergenic 45.0%
AACGAATATCTCCCCTTCTC+AGG - chr7_2:77570080-77570099 Msa1078570:intron 45.0%
CTGAATGTTCACCTGAGAAG+GGG + chr7_2:77570094-77570113 None:intergenic 45.0%
CACTGAATGTTCACCTGAGA+AGG + chr7_2:77570096-77570115 None:intergenic 45.0%
CCGTTCAAGGTTCAATCAGT+TGG + chr7_2:77570162-77570181 None:intergenic 45.0%
CCTTGAACGGACCATTACTA+CGG - chr7_2:77570172-77570191 Msa1078570:intron 45.0%
!!! CTACGGTGTGGTTATTTTGG+CGG - chr7_2:77570189-77570208 Msa1078570:intron 45.0%
! TCGATTCGAGCGGTTTAAGA+CGG - chr7_2:77570230-77570249 Msa1078570:intron 45.0%
ACTTAGCAGCTCTTCTGACA+TGG - chr7_2:77570392-77570411 Msa1078570:intron 45.0%
TGGACCTCATGCAGATGTTT+AGG - chr7_2:77570828-77570847 Msa1078570:CDS 45.0%
CATGCCTAAACATCTGCATG+AGG + chr7_2:77570835-77570854 None:intergenic 45.0%
AGAAGTTAGCTCGGGAGTAA+GGG + chr7_2:77570944-77570963 None:intergenic 45.0%
GCCACAACCACAGAAATCAA+TGG - chr7_2:77571147-77571166 Msa1078570:intron 45.0%
ATGGTTAAGATGCTGGGGAT+TGG + chr7_2:77571176-77571195 None:intergenic 45.0%
! GTGGCCTGATATGTTTCTGT+AGG + chr7_2:77571250-77571269 None:intergenic 45.0%
TGCCATCGTACAAGATTCTG+TGG + chr7_2:77571269-77571288 None:intergenic 45.0%
GCTGATAGACCTTCGTATGA+TGG - chr7_2:77571337-77571356 Msa1078570:intron 45.0%
GTGCACTTGTAGTAACTTCG+AGG + chr7_2:77571412-77571431 None:intergenic 45.0%
GAATGTGAGGAAGGAAGCAA+AGG - chr7_2:77571709-77571728 Msa1078570:intron 45.0%
GGAAGGAAGCAAAGGATTTG+AGG - chr7_2:77571717-77571736 Msa1078570:intron 45.0%
! AAGCAAAGGATTTGAGGCAG+AGG - chr7_2:77571723-77571742 Msa1078570:intron 45.0%
! CACGGTTGAAGCTGTCTTTT+TGG + chr7_2:77571922-77571941 None:intergenic 45.0%
AAACCAATCAACGAACTGGC+TGG + chr7_2:77571947-77571966 None:intergenic 45.0%
!! TCGTTGATTGGTTTCGTTCC+GGG - chr7_2:77571953-77571972 Msa1078570:intron 45.0%
GTTCCGGGTATACTATAGTC+TGG - chr7_2:77571968-77571987 Msa1078570:intron 45.0%
!! TCTGTGGATTCTGAAGTCCT+TGG - chr7_2:77572361-77572380 Msa1078570:intron 45.0%
!! GATTCTGAAGTCCTTGGAGA+TGG - chr7_2:77572367-77572386 Msa1078570:intron 45.0%
GCTTTCGCTGGAGGAAATAT+GGG - chr7_2:77572389-77572408 Msa1078570:intron 45.0%
TGAAGGGAAATCCATATCCC+AGG - chr7_2:77572422-77572441 Msa1078570:intron 45.0%
TGTTCTTGAGTGGCATCTCA+TGG + chr7_2:77572959-77572978 None:intergenic 45.0%
!! AATGAATTAAAATTAAAAAT+CGG + chr7_2:77572110-77572129 None:intergenic 5.0%
TGACCCTTGTAATGCAGGAG+AGG - chr7_2:77569135-77569154 Msa1078570:three_prime_UTR 50.0%
AGGCCTTGAAGCAACTGGTT+TGG + chr7_2:77569935-77569954 None:intergenic 50.0%
CAAGTAGGCCTTGAAGCAAC+TGG + chr7_2:77569940-77569959 None:intergenic 50.0%
CACTGTCTTTGGCCTAATGG+CGG + chr7_2:77570046-77570065 None:intergenic 50.0%
CCTCACTGTCTTTGGCCTAA+TGG + chr7_2:77570049-77570068 None:intergenic 50.0%
CCATTAGGCCAAAGACAGTG+AGG - chr7_2:77570046-77570065 Msa1078570:intron 50.0%
GGCTTGAACCTCACTGTCTT+TGG + chr7_2:77570057-77570076 None:intergenic 50.0%
GAAGGGGAGATATTCGTTGC+TGG + chr7_2:77570078-77570097 None:intergenic 50.0%
CCGTAGTAATGGTCCGTTCA+AGG + chr7_2:77570175-77570194 None:intergenic 50.0%
AACGGACCATTACTACGGTG+TGG - chr7_2:77570177-77570196 Msa1078570:intron 50.0%
ACGGTTGAATCATGACCCAG+AGG - chr7_2:77570249-77570268 Msa1078570:intron 50.0%
GCTCACGTCCAAAACACATC+TGG + chr7_2:77570871-77570890 None:intergenic 50.0%
CAGAAGTTAGCTCGGGAGTA+AGG + chr7_2:77570945-77570964 None:intergenic 50.0%
TACTCCCGAGCTAACTTCTG+AGG - chr7_2:77570945-77570964 Msa1078570:CDS 50.0%
GGCCACAGAATCTTGTACGA+TGG - chr7_2:77571264-77571283 Msa1078570:intron 50.0%
TACGATGGCACCACAGAACA+TGG - chr7_2:77571279-77571298 Msa1078570:intron 50.0%
TGGTCTAAGTGGGGAATGTG+AGG - chr7_2:77571696-77571715 Msa1078570:intron 50.0%
CTAAGTGGGGAATGTGAGGA+AGG - chr7_2:77571700-77571719 Msa1078570:intron 50.0%
! TCAACGAACTGGCTGGTTCA+CGG + chr7_2:77571940-77571959 None:intergenic 50.0%
GAACCAGCCAGTTCGTTGAT+TGG - chr7_2:77571941-77571960 Msa1078570:intron 50.0%
GAAGTGGCAGTATCAGAGGA+AGG - chr7_2:77572307-77572326 Msa1078570:CDS 50.0%
GAGGAAGGTTTAGTAGAGCC+AGG - chr7_2:77572322-77572341 Msa1078570:intron 50.0%
GGCTTTCGCTGGAGGAAATA+TGG - chr7_2:77572388-77572407 Msa1078570:intron 50.0%
CTGGAGGAAATATGGGCAGA+AGG - chr7_2:77572396-77572415 Msa1078570:intron 50.0%
GAGGAAATATGGGCAGAAGG+TGG - chr7_2:77572399-77572418 Msa1078570:intron 50.0%
ATATGGGCAGAAGGTGGTGA+AGG - chr7_2:77572405-77572424 Msa1078570:intron 50.0%
TATGGGCAGAAGGTGGTGAA+GGG - chr7_2:77572406-77572425 Msa1078570:intron 50.0%
ATCGAACCAGCGTGACCTCT+GGG + chr7_2:77570267-77570286 None:intergenic 55.0%
!! CGCTGGTTCGATGTCCGATT+TGG - chr7_2:77570275-77570294 Msa1078570:intron 55.0%
GATGGCACCACAGAACATGG+AGG - chr7_2:77571282-77571301 Msa1078570:intron 55.0%
TGGTCCTCCTCCATGTTCTG+TGG + chr7_2:77571292-77571311 None:intergenic 55.0%
CGAAACTCGGGAGCAACATC+AGG - chr7_2:77571541-77571560 Msa1078570:intron 55.0%
TCCTTGGAGATGGCTTTCGC+TGG - chr7_2:77572377-77572396 Msa1078570:intron 55.0%
TCCAGCGAAAGCCATCTCCA+AGG + chr7_2:77572381-77572400 None:intergenic 55.0%
TTGGAGATGGCTTTCGCTGG+AGG - chr7_2:77572380-77572399 Msa1078570:intron 55.0%
CTGCAATGTTCGCAAGCACG+TGG - chr7_2:77572878-77572897 Msa1078570:intron 55.0%
TCATGACCCAGAGGTCACGC+TGG - chr7_2:77570258-77570277 Msa1078570:intron 60.0%
CATCGAACCAGCGTGACCTC+TGG + chr7_2:77570268-77570287 None:intergenic 60.0%
GGCACCACAGAACATGGAGG+AGG - chr7_2:77571285-77571304 Msa1078570:intron 60.0%
TGAAGACGCGGCGCTTGATG+TGG - chr7_2:77572715-77572734 Msa1078570:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 77568950 77573278 77568950 ID=Msa1078570;Name=Msa1078570
chr7_2 mRNA 77568950 77573278 77568950 ID=Msa1078570-mRNA-1;Parent=Msa1078570;Name=Msa1078570-mRNA-1;_AED=0.08;_eAED=0.08;_QI=184|0.5|0.44|1|0.37|0.44|9|253|402
chr7_2 exon 77568950 77569377 77568950 ID=Msa1078570-mRNA-1:exon:19067;Parent=Msa1078570-mRNA-1
chr7_2 exon 77569785 77569943 77569785 ID=Msa1078570-mRNA-1:exon:19066;Parent=Msa1078570-mRNA-1
chr7_2 exon 77570458 77570609 77570458 ID=Msa1078570-mRNA-1:exon:19065;Parent=Msa1078570-mRNA-1
chr7_2 exon 77570634 77570856 77570634 ID=Msa1078570-mRNA-1:exon:19064;Parent=Msa1078570-mRNA-1
chr7_2 exon 77570878 77571101 77570878 ID=Msa1078570-mRNA-1:exon:19063;Parent=Msa1078570-mRNA-1
chr7_2 exon 77571725 77571827 77571725 ID=Msa1078570-mRNA-1:exon:19062;Parent=Msa1078570-mRNA-1
chr7_2 exon 77572161 77572336 77572161 ID=Msa1078570-mRNA-1:exon:19061;Parent=Msa1078570-mRNA-1
chr7_2 exon 77572967 77573076 77572967 ID=Msa1078570-mRNA-1:exon:19060;Parent=Msa1078570-mRNA-1
chr7_2 exon 77573208 77573278 77573208 ID=Msa1078570-mRNA-1:exon:19059;Parent=Msa1078570-mRNA-1
chr7_2 five_prime_UTR 77573208 77573278 77573208 ID=Msa1078570-mRNA-1:five_prime_utr;Parent=Msa1078570-mRNA-1
chr7_2 five_prime_UTR 77572967 77573076 77572967 ID=Msa1078570-mRNA-1:five_prime_utr;Parent=Msa1078570-mRNA-1
chr7_2 five_prime_UTR 77572334 77572336 77572334 ID=Msa1078570-mRNA-1:five_prime_utr;Parent=Msa1078570-mRNA-1
chr7_2 CDS 77572161 77572333 77572161 ID=Msa1078570-mRNA-1:cds;Parent=Msa1078570-mRNA-1
chr7_2 CDS 77571725 77571827 77571725 ID=Msa1078570-mRNA-1:cds;Parent=Msa1078570-mRNA-1
chr7_2 CDS 77570878 77571101 77570878 ID=Msa1078570-mRNA-1:cds;Parent=Msa1078570-mRNA-1
chr7_2 CDS 77570634 77570856 77570634 ID=Msa1078570-mRNA-1:cds;Parent=Msa1078570-mRNA-1
chr7_2 CDS 77570458 77570609 77570458 ID=Msa1078570-mRNA-1:cds;Parent=Msa1078570-mRNA-1
chr7_2 CDS 77569785 77569943 77569785 ID=Msa1078570-mRNA-1:cds;Parent=Msa1078570-mRNA-1
chr7_2 CDS 77569203 77569377 77569203 ID=Msa1078570-mRNA-1:cds;Parent=Msa1078570-mRNA-1
chr7_2 three_prime_UTR 77568950 77569202 77568950 ID=Msa1078570-mRNA-1:three_prime_utr;Parent=Msa1078570-mRNA-1
Gene Sequence

>Msa1078570

ATGATGGATATTGAAGAAGCAGAAAGAGTAGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCTTCATACAAATCTTTCTCAGAGCTTCTAGCAGGCGCAATCAATTCCACTCCTCCAATTGCATCTTCTCAAACTACAATATCCGCCATTAGGCCAAAGACAGTGAGCTCTTCTGACATGGATCCCAAACCTGATACCAATCAATCTCTCATTTACAAACCAATGGCAAAATTTGTGTCACAGACAACTGTATCTCTCTTGGCAAACATGGGAATTTGCAGTACTAATCAGCCACAACCACAGAAATCAATGGAGACCAATCCCCAGCATCTTAACCATGACAACTTTAGAGCTAACACGAGCTCGAAATTACATCAGAACATTACCCTTCCTACAGAAACATATCAGGCCACAGAATCTTGTACGATGGCACCACAGAACATGGAGGAGGACCAAAAAGCATTACCATCCACAAATAATGCTGATAGACCTTCAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTACTACAAGTGCACATATCCTAATTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTAGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATGGAAAGCAACAACATCAAAAGCGAAACTCGGGAGCAACATCAGGAATGATTTCTGATGGAATGGTTCAAGATAAAAATGAAAGGAATGAAGGAAGAATAGATAATCAAGTCAAAGCTTCACAGCCTAATGATTTTGCTCTAGAAAATTCTTGTGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAAGGATTTGAGGCAGAGGAAGATGACCCTAGAAGTAAAAGAAGGAAAAATGAGAATCAATCAAATGAAGTGGCAGTATCAGAGGAAGGTTTAGTAGAGCCAGGCATTGTAATGCAAAGTTCTGTGGATTCTGAAGTCCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAGTGTCAACTGCAATGTTCGCAAGCACGTGGAGAGATCAATAGATGATCCAAAATCATTTGTGACTACATATGAAGGAAAACACAACCATGAGATGCCACTCAAGAACACAACAACAATGACCTCTGAAAAAGATTCAATGACTTCTCTTAAGTAA
Protein sequence

>Msa1078570

MMDIEEAERVVVAKPVASRPTCSSYKSFSELLAGAINSTPPIASSQTTISAIRPKTVSSSDMDPKPDTNQSLIYKPMAKFVSQTTVSLLANMGICSTNQPQPQKSMETNPQHLNHDNFRANTSSKLHQNITLPTETYQATESCTMAPQNMEEDQKALPSTNNADRPSKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSLDGEIAEIVYKGEHNHGKQQHQKRNSGATSGMISDGMVQDKNERNEGRIDNQVKASQPNDFALENSCGLSGECEEGSKGFEAEEDDPRSKRRKNENQSNEVAVSEEGLVEPGIVMQSSVDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTSVNCNVRKHVERSIDDPKSFVTTYEGKHNHEMPLKNTTTMTSEKDSMTSLK*