AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1169970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169970 MtrunA17_Chr7g0263531 87.879 462 19 2 1 449 1 438 0.0 823
Msa1169970 MtrunA17_Chr5g0418191 39.450 436 200 13 30 449 10 397 1.32e-80 256
Msa1169970 MtrunA17_Chr7g0218081 51.321 265 103 5 185 431 213 469 3.69e-79 254
Msa1169970 MtrunA17_Chr7g0218081 41.584 101 53 2 334 434 195 289 1.14e-16 82.4
Msa1169970 MtrunA17_Chr5g0445311 45.487 277 142 4 162 437 161 429 3.14e-72 237
Msa1169970 MtrunA17_Chr7g0249311 44.884 303 125 6 182 443 162 463 2.83e-70 235
Msa1169970 MtrunA17_Chr3g0101131 48.571 245 110 4 195 431 238 474 6.01e-69 229
Msa1169970 MtrunA17_Chr5g0432161 49.004 251 101 6 197 431 241 480 2.12e-68 228
Msa1169970 MtrunA17_Chr3g0079691 45.423 284 110 5 198 437 278 560 9.82e-68 229
Msa1169970 MtrunA17_Chr7g0243891 49.362 235 101 3 199 431 215 433 7.23e-66 220
Msa1169970 MtrunA17_Chr7g0243891 48.649 74 37 1 373 446 217 289 1.69e-14 75.5
Msa1169970 MtrunA17_Chr3g0106491 49.187 246 98 5 197 431 195 424 5.17e-65 217
Msa1169970 MtrunA17_Chr3g0106491 53.226 62 28 1 373 434 199 259 8.01e-14 73.6
Msa1169970 MtrunA17_Chr4g0042831 46.122 245 91 5 194 437 139 343 1.01e-64 213
Msa1169970 MtrunA17_Chr4g0004911 43.206 287 122 7 150 432 147 396 3.80e-63 212
Msa1169970 MtrunA17_Chr7g0249301 40.645 310 121 6 182 431 45 351 2.05e-61 204
Msa1169970 MtrunA17_Chr7g0249301 48.101 79 40 1 368 446 58 135 2.65e-15 77.4
Msa1169970 MtrunA17_Chr4g0074001 36.145 249 154 3 187 432 173 419 2.60e-44 162
Msa1169970 MtrunA17_Chr4g0074001 53.731 67 30 1 199 264 358 424 4.46e-16 80.5
Msa1169970 MtrunA17_Chr5g0447701 35.686 255 133 4 190 431 75 311 1.58e-43 157
Msa1169970 MtrunA17_Chr5g0447701 40.659 91 48 2 345 435 70 154 3.97e-12 67.8
Msa1169970 MtrunA17_Chr6g0468181 94.118 68 4 0 216 283 18 85 2.53e-39 137
Msa1169970 MtrunA17_Chr7g0270191 61.842 76 29 0 357 432 130 205 3.39e-27 110
Msa1169970 MtrunA17_Chr7g0270191 62.500 56 20 1 201 255 146 201 2.22e-15 76.6
Msa1169970 MtrunA17_Chr1g0188941 48.810 84 43 0 348 431 27 110 9.97e-26 101
Msa1169970 MtrunA17_Chr1g0188941 55.357 56 24 1 201 255 52 107 9.34e-16 73.2
Msa1169970 MtrunA17_Chr4g0051881 47.525 101 53 0 331 431 137 237 4.15e-25 105
Msa1169970 MtrunA17_Chr4g0051881 62.500 56 20 1 201 255 179 234 1.62e-15 77.4
Msa1169970 MtrunA17_Chr1g0194481 57.333 75 32 0 357 431 143 217 2.80e-24 102
Msa1169970 MtrunA17_Chr1g0194481 60.714 56 21 1 201 255 159 214 1.38e-15 77.4
Msa1169970 MtrunA17_Chr8g0335811 51.064 94 43 2 355 448 137 227 1.02e-23 99.0
Msa1169970 MtrunA17_Chr8g0335811 62.500 56 20 1 201 255 155 210 7.73e-16 76.6
Msa1169970 MtrunA17_Chr5g0432071 64.706 68 23 1 201 267 105 172 2.12e-23 97.8
Msa1169970 MtrunA17_Chr5g0432071 52.542 59 27 1 373 431 105 162 6.93e-13 67.8
Msa1169970 MtrunA17_Chr3g0129361 56.944 72 31 0 357 428 129 200 2.33e-23 97.8
Msa1169970 MtrunA17_Chr3g0129361 57.143 56 23 1 201 255 145 200 1.98e-14 72.4
Msa1169970 MtrunA17_Chr5g0443131 60.274 73 27 1 359 431 146 216 4.45e-23 99.4
Msa1169970 MtrunA17_Chr5g0443131 64.286 56 19 1 201 255 158 213 4.36e-16 79.0
Msa1169970 MtrunA17_Chr5g0418781 47.917 96 50 0 352 447 104 199 7.43e-23 97.8
Msa1169970 MtrunA17_Chr5g0418781 60.714 56 21 1 201 255 125 180 2.15e-14 73.2
Msa1169970 MtrunA17_Chr8g0383351 57.534 73 30 1 357 428 144 216 9.55e-23 96.7
Msa1169970 MtrunA17_Chr8g0383351 57.143 56 23 1 201 255 161 216 1.39e-14 73.2
Msa1169970 MtrunA17_Chr6g0485431 51.282 78 37 1 356 432 138 215 1.70e-22 98.6
Msa1169970 MtrunA17_Chr6g0485431 50.000 66 31 2 201 264 155 220 8.06e-13 69.7
Msa1169970 MtrunA17_Chr2g0294231 56.000 75 33 0 357 431 188 262 1.74e-22 98.6
Msa1169970 MtrunA17_Chr2g0294231 50.000 80 30 2 201 270 204 283 1.48e-15 78.2
Msa1169970 MtrunA17_Chr8g0383251 50.685 73 36 0 360 432 96 168 1.76e-21 91.7
Msa1169970 MtrunA17_Chr8g0383251 55.357 56 24 1 201 255 109 164 2.33e-11 62.8
Msa1169970 MtrunA17_Chr7g0224801 54.667 75 32 1 362 436 83 155 3.37e-21 90.5
Msa1169970 MtrunA17_Chr7g0224801 53.571 56 25 1 201 255 94 149 8.34e-14 69.3
Msa1169970 MtrunA17_Chr2g0288871 42.857 119 57 3 324 431 247 365 3.57e-21 96.3
Msa1169970 MtrunA17_Chr2g0288871 52.632 57 25 2 201 255 306 362 5.63e-12 67.8
Msa1169970 MtrunA17_Chr4g0060271 51.351 74 35 1 360 432 243 316 4.11e-21 96.3
Msa1169970 MtrunA17_Chr4g0060271 52.381 63 27 3 196 255 250 312 1.06e-12 70.1
Msa1169970 MtrunA17_Chr2g0302391 40.000 135 62 4 302 431 151 271 6.70e-21 94.7
Msa1169970 MtrunA17_Chr2g0302391 50.877 57 26 2 201 255 212 268 2.51e-11 65.5
Msa1169970 MtrunA17_Chr3g0129321 44.706 85 47 0 356 440 102 186 1.26e-20 89.7
Msa1169970 MtrunA17_Chr3g0129321 57.143 56 23 1 201 255 119 174 4.79e-13 68.2
Msa1169970 MtrunA17_Chr4g0051181 51.351 74 35 1 360 432 231 304 1.85e-20 93.6
Msa1169970 MtrunA17_Chr4g0051181 54.386 57 24 2 201 255 244 300 6.45e-13 70.5
Msa1169970 MtrunA17_Chr5g0401821 48.000 75 38 1 368 441 195 269 3.09e-20 90.1
Msa1169970 MtrunA17_Chr5g0401821 51.429 70 31 3 188 255 188 256 1.12e-14 73.9
Msa1169970 MtrunA17_Chr7g0270831 50.685 73 35 1 360 431 204 276 3.43e-20 92.4
Msa1169970 MtrunA17_Chr7g0270831 52.632 57 25 2 201 255 217 273 6.06e-12 67.4
Msa1169970 MtrunA17_Chr4g0068541 52.055 73 35 0 360 432 196 268 5.26e-20 91.7
Msa1169970 MtrunA17_Chr4g0068541 60.714 56 21 1 201 255 209 264 4.42e-15 77.0
Msa1169970 MtrunA17_Chr3g0099641 46.988 83 43 1 350 431 229 311 5.82e-20 92.0
Msa1169970 MtrunA17_Chr3g0099641 50.000 58 27 2 201 256 252 309 3.00e-12 68.6
Msa1169970 MtrunA17_Chr2g0333851 52.857 70 32 1 363 431 160 229 6.29e-20 90.1
Msa1169970 MtrunA17_Chr2g0333851 54.386 57 24 2 201 255 170 226 3.85e-14 73.2
Msa1169970 MtrunA17_Chr4g0075201 41.489 94 54 1 339 431 234 327 1.18e-19 91.3
Msa1169970 MtrunA17_Chr4g0075201 50.877 57 26 2 201 255 268 324 2.56e-11 65.5
Msa1169970 MtrunA17_Chr4g0053281 48.000 75 38 1 368 441 262 336 1.28e-19 89.7
Msa1169970 MtrunA17_Chr4g0053281 53.731 67 28 3 191 255 258 323 4.78e-15 76.3
Msa1169970 MtrunA17_Chr1g0147881 52.941 68 31 1 364 430 254 321 1.29e-19 89.7
Msa1169970 MtrunA17_Chr1g0147881 48.810 84 40 3 191 272 254 336 3.77e-17 82.4
Msa1169970 MtrunA17_Chr7g0248721 35.669 157 85 4 295 448 75 218 2.61e-19 86.3
Msa1169970 MtrunA17_Chr7g0248721 55.385 65 27 2 192 255 133 196 1.04e-13 70.1
Msa1169970 MtrunA17_Chr4g0071521 57.576 66 27 1 364 428 237 302 3.80e-19 87.8
Msa1169970 MtrunA17_Chr4g0071521 50.725 69 31 3 191 257 237 304 2.19e-14 73.9
Msa1169970 MtrunA17_Chr8g0379461 54.930 71 31 1 373 442 77 147 4.58e-19 86.3
Msa1169970 MtrunA17_Chr8g0379461 50.820 61 28 2 198 256 74 134 1.42e-13 70.5
Msa1169970 MtrunA17_Chr7g0216891 50.633 79 36 2 360 437 207 283 5.43e-19 89.7
Msa1169970 MtrunA17_Chr7g0216891 50.746 67 30 3 195 258 213 279 2.37e-12 68.9
Msa1169970 MtrunA17_Chr1g0189391 52.857 70 32 1 360 428 85 154 7.31e-19 87.4
Msa1169970 MtrunA17_Chr1g0189391 51.724 58 26 2 201 256 98 155 6.28e-11 63.5
Msa1169970 MtrunA17_Chr2g0322391 43.529 85 47 1 348 431 325 409 1.91e-18 87.8
Msa1169970 MtrunA17_Chr1g0150801 56.667 60 26 0 369 428 99 158 2.07e-18 82.4
Msa1169970 MtrunA17_Chr1g0150801 53.571 56 25 1 201 255 103 158 6.25e-13 66.6
Msa1169970 MtrunA17_Chr7g0248691 42.241 116 49 4 333 446 131 230 2.45e-18 85.9
Msa1169970 MtrunA17_Chr7g0248691 44.444 72 38 2 199 268 153 224 3.23e-11 64.3
Msa1169970 MtrunA17_Chr4g0025061 40.000 110 54 3 334 431 311 420 3.26e-18 87.4
Msa1169970 MtrunA17_Chr4g0025061 41.772 79 40 3 201 273 361 439 1.37e-11 66.6
Msa1169970 MtrunA17_Chr7g0238921 60.714 56 22 0 373 428 125 180 3.54e-18 85.1
Msa1169970 MtrunA17_Chr7g0238921 58.929 56 22 1 201 255 125 180 1.59e-13 71.2
Msa1169970 MtrunA17_Chr1g0150281 50.746 67 32 1 363 428 131 197 3.83e-18 84.3
Msa1169970 MtrunA17_Chr1g0150281 54.098 61 26 2 201 259 141 201 6.02e-16 78.2
Msa1169970 MtrunA17_Chr8g0386241 50.000 68 34 0 361 428 92 159 4.05e-18 82.0
Msa1169970 MtrunA17_Chr8g0386241 55.357 56 24 1 201 255 104 159 4.54e-15 73.2
Msa1169970 MtrunA17_Chr7g0228941 52.239 67 31 1 364 429 44 110 7.98e-18 79.3
Msa1169970 MtrunA17_Chr7g0228941 47.761 67 32 3 191 255 44 109 1.49e-13 67.4
Msa1169970 MtrunA17_Chr4g0001361 52.381 63 29 1 370 431 160 222 9.97e-18 84.0
Msa1169970 MtrunA17_Chr4g0001361 33.824 136 73 3 201 319 163 298 8.01e-16 78.2
Msa1169970 MtrunA17_Chr1g0184691 53.226 62 28 1 368 428 289 350 1.28e-17 84.0
Msa1169970 MtrunA17_Chr1g0184691 49.383 81 36 4 189 265 281 360 8.69e-15 75.5
Msa1169970 MtrunA17_Chr3g0136961 36.220 127 57 5 326 428 69 195 2.22e-17 82.4
Msa1169970 MtrunA17_Chr3g0136961 54.098 61 26 2 201 259 139 199 5.14e-16 78.6
Msa1169970 MtrunA17_Chr2g0284321 52.564 78 31 3 373 444 36 113 2.71e-17 80.5
Msa1169970 MtrunA17_Chr2g0284321 50.000 60 28 2 198 255 33 92 1.01e-13 70.1
Msa1169970 MtrunA17_Chr8g0348311 46.000 100 35 4 334 431 133 215 3.18e-17 82.8
Msa1169970 MtrunA17_Chr8g0348311 42.857 77 42 2 194 268 149 225 6.10e-12 66.6
Msa1169970 MtrunA17_Chr2g0319961 39.200 125 62 5 310 432 29 141 5.27e-17 80.9
Msa1169970 MtrunA17_Chr2g0319961 51.667 60 27 2 198 255 78 137 3.71e-12 66.6
Msa1169970 MtrunA17_Chr5g0447711 46.667 75 40 0 357 431 215 289 5.37e-17 81.6
Msa1169970 MtrunA17_Chr5g0447711 47.458 59 31 0 201 259 84 142 9.75e-12 65.9
Msa1169970 MtrunA17_Chr5g0447711 46.154 65 34 1 192 255 222 286 1.43e-11 65.5
Msa1169970 MtrunA17_Chr8g0387501 50.704 71 33 2 364 433 122 191 7.87e-17 80.5
Msa1169970 MtrunA17_Chr8g0387501 50.704 71 31 3 201 269 130 198 3.69e-13 69.7
Msa1169970 MtrunA17_Chr2g0293481 45.833 96 45 3 337 431 238 327 1.24e-16 82.0
Msa1169970 MtrunA17_Chr2g0293481 45.714 70 36 2 201 268 268 337 3.64e-11 65.1
Msa1169970 MtrunA17_Chr3g0139021 47.312 93 37 4 337 428 290 371 4.15e-16 80.1
Msa1169970 MtrunA17_Chr3g0139021 41.379 87 48 3 180 264 295 380 7.20e-13 70.1
Msa1169970 MtrunA17_Chr1g0202461 39.806 103 46 2 330 431 234 321 4.42e-16 79.7
Msa1169970 MtrunA17_Chr1g0202461 44.737 76 40 2 195 268 256 331 7.18e-15 75.9
Msa1169970 MtrunA17_Chr2g0289181 44.444 81 42 2 367 444 9 89 1.75e-15 75.9
Msa1169970 MtrunA17_Chr2g0289181 52.113 71 32 2 201 269 15 85 1.15e-14 73.2
Msa1169970 MtrunA17_Chr4g0025051 45.205 73 39 1 360 431 323 395 1.93e-15 78.6
Msa1169970 MtrunA17_Chr7g0270051 48.571 70 33 2 372 438 53 122 3.04e-15 75.5
Msa1169970 MtrunA17_Chr7g0270051 54.386 57 24 2 201 255 54 110 2.33e-12 67.0
Msa1169970 MtrunA17_Chr1g0150271 45.455 66 35 1 367 431 96 161 4.60e-15 75.1
Msa1169970 MtrunA17_Chr1g0150271 51.724 58 26 2 201 256 102 159 1.68e-13 70.5
Msa1169970 MtrunA17_Chr3g0126391 48.649 74 30 2 356 426 122 190 1.03e-14 75.1
Msa1169970 MtrunA17_Chr3g0126391 51.667 60 25 2 198 253 131 190 3.55e-12 67.4
Msa1169970 MtrunA17_Chr8g0387981 45.679 81 38 3 177 253 111 189 4.69e-14 73.2
Msa1169970 MtrunA17_Chr8g0387981 50.704 71 29 2 362 426 119 189 2.08e-13 71.2
Msa1169970 MtrunA17_Chr4g0024391 37.805 82 50 1 351 431 208 289 1.67e-12 69.3
Msa1169970 MtrunA17_Chr2g0315381 38.614 101 55 3 330 426 104 201 2.34e-12 67.8
Msa1169970 MtrunA17_Chr1g0188961 50.000 52 24 1 392 441 3 54 8.86e-12 60.5
Msa1169970 MtrunA17_Chr8g0347251 49.123 57 25 2 201 253 137 193 2.35e-11 65.1
Msa1169970 MtrunA17_Chr2g0315361 46.774 62 30 1 368 426 144 205 4.31e-11 63.9
Msa1169970 MtrunA17_Chr5g0419241 40.000 60 36 0 339 398 44 103 5.25e-11 59.7
Msa1169970 MtrunA17_Chr5g0431811 30.198 202 109 8 236 432 561 735 5.50e-11 65.1
Msa1169970 MtrunA17_Chr7g0275531 36.170 94 54 3 201 288 119 212 8.31e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1169970 AT2G37260.1 40.252 477 185 14 2 439 1 416 2.17e-95 294
Msa1169970 AT2G37260.2 52.399 271 95 7 192 439 75 334 1.36e-80 253
Msa1169970 AT2G37260.3 52.399 271 95 7 192 439 77 336 1.38e-80 253
Msa1169970 AT2G03340.1 51.837 245 109 4 194 437 244 480 1.96e-80 258
Msa1169970 AT1G13960.1 37.931 435 228 12 20 431 53 468 2.74e-80 258
Msa1169970 AT1G13960.2 49.600 250 110 3 194 431 70 315 3.73e-77 244
Msa1169970 AT4G26640.7 42.953 298 145 8 152 437 122 406 9.09e-69 228
Msa1169970 AT4G26640.1 42.953 298 145 8 152 437 90 374 1.65e-68 226
Msa1169970 AT2G38470.1 51.639 244 106 5 197 431 181 421 1.97e-68 227
Msa1169970 AT4G26640.2 43.056 288 143 7 162 437 168 446 2.70e-68 227
Msa1169970 AT4G26640.5 47.131 244 113 5 201 437 36 270 4.74e-68 222
Msa1169970 AT4G26640.6 47.131 244 113 5 201 437 36 270 4.74e-68 222
Msa1169970 AT4G26640.4 47.131 244 113 5 201 437 36 270 4.74e-68 222
Msa1169970 AT4G26640.3 47.131 244 113 5 201 437 36 270 4.74e-68 222
Msa1169970 AT5G56270.1 45.230 283 99 7 198 431 271 546 4.72e-63 216
Msa1169970 AT5G56270.1 39.823 113 64 2 201 309 488 600 9.64e-14 73.9
Msa1169970 AT3G01080.1 46.610 236 93 3 196 431 163 365 5.61e-63 210
Msa1169970 AT5G07100.2 46.862 239 70 4 194 431 18 200 8.24e-63 202
Msa1169970 AT5G07100.2 46.753 77 39 2 180 255 122 197 6.80e-14 71.2
Msa1169970 AT5G07100.4 46.862 239 70 4 194 431 18 200 8.24e-63 202
Msa1169970 AT5G07100.4 46.753 77 39 2 180 255 122 197 6.80e-14 71.2
Msa1169970 AT5G07100.5 46.862 239 70 4 194 431 18 200 8.24e-63 202
Msa1169970 AT5G07100.5 46.753 77 39 2 180 255 122 197 6.80e-14 71.2
Msa1169970 AT5G07100.3 46.862 239 70 4 194 431 18 200 8.24e-63 202
Msa1169970 AT5G07100.3 46.753 77 39 2 180 255 122 197 6.80e-14 71.2
Msa1169970 AT5G07100.1 46.862 239 70 4 194 431 111 293 1.26e-62 205
Msa1169970 AT5G07100.1 46.753 77 39 2 180 255 215 290 1.04e-13 72.0
Msa1169970 AT3G01080.2 46.610 236 93 3 196 431 201 403 1.48e-62 210
Msa1169970 AT4G26440.1 43.750 256 122 3 198 431 176 431 1.85e-62 212
Msa1169970 AT2G30250.1 45.082 244 106 5 197 431 163 387 8.48e-55 187
Msa1169970 AT2G04880.2 39.921 253 134 5 201 444 112 355 2.88e-51 180
Msa1169970 AT2G04880.2 45.570 79 42 1 366 444 105 182 3.11e-15 78.2
Msa1169970 AT4G12020.3 45.854 205 100 4 194 392 462 661 1.71e-44 167
Msa1169970 AT4G12020.3 48.485 66 32 2 366 431 463 526 2.47e-12 70.1
Msa1169970 AT4G12020.2 45.854 205 100 4 194 392 462 661 1.95e-44 167
Msa1169970 AT4G12020.2 48.485 66 32 2 366 431 463 526 2.57e-12 69.7
Msa1169970 AT4G12020.1 45.854 205 100 4 194 392 462 661 2.02e-44 167
Msa1169970 AT4G12020.1 48.485 66 32 2 366 431 463 526 2.70e-12 69.7
Msa1169970 AT4G12020.9 45.854 205 100 4 194 392 462 661 2.02e-44 167
Msa1169970 AT4G12020.9 48.485 66 32 2 366 431 463 526 2.70e-12 69.7
Msa1169970 AT4G12020.6 45.854 205 100 4 194 392 462 661 2.05e-44 167
Msa1169970 AT4G12020.6 48.485 66 32 2 366 431 463 526 2.58e-12 69.7
Msa1169970 AT4G12020.8 45.854 205 100 4 194 392 462 661 2.05e-44 167
Msa1169970 AT4G12020.8 48.485 66 32 2 366 431 463 526 2.58e-12 69.7
Msa1169970 AT4G12020.10 45.854 205 100 4 194 392 462 661 2.08e-44 167
Msa1169970 AT4G12020.10 48.485 66 32 2 366 431 463 526 2.58e-12 69.7
Msa1169970 AT4G12020.7 45.854 205 100 4 194 392 462 661 2.19e-44 167
Msa1169970 AT4G12020.7 48.485 66 32 2 366 431 463 526 2.66e-12 69.7
Msa1169970 AT4G12020.4 45.854 205 100 4 194 392 462 661 2.24e-44 167
Msa1169970 AT4G12020.4 48.485 66 32 2 366 431 463 526 2.63e-12 69.7
Msa1169970 AT4G30935.1 38.525 244 123 8 198 432 166 391 2.44e-44 161
Msa1169970 AT4G30935.1 47.297 74 38 1 201 273 332 405 5.74e-16 80.5
Msa1169970 AT4G12020.5 45.854 205 100 4 194 392 395 594 2.84e-44 166
Msa1169970 AT4G12020.5 48.485 66 32 2 366 431 396 459 2.91e-12 69.7
Msa1169970 AT4G12020.11 45.854 205 100 4 194 392 462 661 5.47e-44 166
Msa1169970 AT4G12020.11 48.485 66 32 2 366 431 463 526 3.73e-12 69.3
Msa1169970 AT3G01080.3 64.865 74 26 0 196 269 201 274 1.46e-28 115
Msa1169970 AT3G01080.3 59.322 59 23 1 373 431 206 263 6.82e-16 79.0
Msa1169970 AT2G04880.1 49.550 111 55 1 334 444 270 379 1.20e-26 112
Msa1169970 AT2G04880.1 64.912 57 20 0 201 257 112 168 7.52e-20 92.4
Msa1169970 AT2G04880.1 64.286 56 19 1 201 255 308 363 5.13e-17 83.6
Msa1169970 AT2G04880.1 45.570 79 42 1 366 444 105 182 3.53e-15 77.8
Msa1169970 AT1G29860.1 55.814 86 36 1 356 441 122 205 2.55e-25 105
Msa1169970 AT1G29860.1 64.286 56 19 1 201 255 137 192 6.02e-16 78.6
Msa1169970 AT4G18170.1 48.182 110 48 3 331 431 122 231 2.83e-25 105
Msa1169970 AT4G18170.1 62.500 56 20 1 201 255 173 228 1.37e-15 77.8
Msa1169970 AT5G46350.1 54.217 83 38 0 358 440 169 251 7.35e-25 105
Msa1169970 AT5G46350.1 60.714 56 21 1 201 255 184 239 1.30e-14 75.1
Msa1169970 AT5G49520.1 59.459 74 28 1 359 432 210 281 1.93e-24 105
Msa1169970 AT5G49520.1 62.500 56 20 1 201 255 222 277 2.70e-15 77.8
Msa1169970 AT2G47260.1 60.811 74 27 1 359 432 163 234 2.63e-24 103
Msa1169970 AT2G47260.1 58.929 56 22 1 201 255 175 230 1.08e-14 75.5
Msa1169970 AT2G44745.1 51.087 92 43 2 346 437 120 209 1.04e-23 99.4
Msa1169970 AT2G44745.1 62.500 56 20 1 201 255 146 201 7.00e-16 77.0
Msa1169970 AT5G41570.1 60.563 71 28 0 358 428 84 154 1.50e-23 97.4
Msa1169970 AT5G41570.1 57.143 56 23 1 201 255 99 154 1.08e-14 72.4
Msa1169970 AT1G55600.1 59.722 72 29 0 360 431 295 366 1.78e-23 103
Msa1169970 AT1G55600.1 58.929 56 22 1 201 255 308 363 4.31e-13 71.6
Msa1169970 AT1G69310.4 51.899 79 38 0 351 429 126 204 2.87e-23 99.8
Msa1169970 AT1G69310.4 60.714 56 21 1 201 255 148 203 5.88e-15 75.5
Msa1169970 AT1G69310.2 51.899 79 38 0 351 429 126 204 2.87e-23 99.8
Msa1169970 AT1G69310.2 60.714 56 21 1 201 255 148 203 5.88e-15 75.5
Msa1169970 AT1G69310.1 51.899 79 38 0 351 429 126 204 2.87e-23 99.8
Msa1169970 AT1G69310.1 60.714 56 21 1 201 255 148 203 5.88e-15 75.5
Msa1169970 AT1G64000.1 60.870 69 27 0 360 428 102 170 4.52e-23 96.7
Msa1169970 AT1G64000.1 57.143 56 23 1 201 255 115 170 4.77e-15 73.9
Msa1169970 AT3G62340.1 62.687 67 23 1 368 432 112 178 3.98e-22 96.3
Msa1169970 AT3G62340.1 55.172 58 25 1 201 257 119 176 2.97e-13 70.5
Msa1169970 AT4G39410.1 56.944 72 31 0 357 428 208 279 6.05e-22 96.3
Msa1169970 AT4G39410.1 48.611 72 36 1 201 271 224 295 1.23e-14 74.7
Msa1169970 AT5G26170.1 53.623 69 32 0 360 428 101 169 1.13e-21 92.0
Msa1169970 AT5G26170.1 55.357 56 24 1 201 255 114 169 6.29e-15 73.2
Msa1169970 AT4G04450.2 43.636 110 56 3 342 445 165 274 1.99e-21 96.7
Msa1169970 AT4G04450.2 52.632 57 25 2 201 255 199 255 5.28e-12 67.8
Msa1169970 AT4G24240.1 45.045 111 55 3 337 442 242 351 2.88e-21 95.1
Msa1169970 AT4G24240.1 54.412 68 28 3 191 256 273 339 2.20e-15 77.8
Msa1169970 AT5G15130.2 51.282 78 37 1 360 436 173 250 3.84e-21 96.3
Msa1169970 AT5G15130.2 50.794 63 28 3 196 255 180 242 1.10e-11 67.0
Msa1169970 AT5G15130.1 48.780 82 41 1 360 440 215 296 4.39e-21 96.3
Msa1169970 AT5G15130.1 50.794 63 28 3 196 255 222 284 1.23e-11 67.0
Msa1169970 AT2G21900.1 51.429 70 33 1 363 431 99 168 6.09e-21 90.9
Msa1169970 AT2G21900.1 51.786 56 26 1 201 255 110 165 1.80e-13 69.7
Msa1169970 AT5G13080.1 53.333 75 33 1 362 436 57 129 6.76e-21 89.0
Msa1169970 AT5G13080.1 57.143 56 23 1 201 255 68 123 5.87e-16 75.1
Msa1169970 AT4G04450.1 43.636 110 56 3 342 445 259 368 7.31e-21 95.5
Msa1169970 AT4G04450.1 52.632 57 25 2 201 255 293 349 8.83e-12 67.4
Msa1169970 AT1G68150.1 37.226 137 80 3 309 440 168 303 8.57e-21 94.0
Msa1169970 AT1G68150.1 56.140 57 23 2 201 255 236 292 4.43e-13 70.9
Msa1169970 AT2G46130.1 53.521 71 33 0 358 428 16 86 1.49e-20 87.0
Msa1169970 AT2G46130.1 62.500 56 20 1 201 255 31 86 3.20e-16 74.7
Msa1169970 AT3G01970.1 52.174 69 33 0 362 430 55 123 1.15e-19 85.9
Msa1169970 AT3G01970.1 54.386 57 25 1 201 256 66 122 1.80e-13 68.2
Msa1169970 AT1G80840.1 34.437 151 86 4 282 431 68 206 1.18e-19 89.7
Msa1169970 AT1G80840.1 41.860 86 48 2 201 284 147 232 3.64e-13 70.5
Msa1169970 AT1G69810.2 44.330 97 51 3 340 433 112 208 3.60e-19 88.6
Msa1169970 AT4G01720.1 52.055 73 34 1 360 431 227 299 3.78e-19 90.1
Msa1169970 AT4G01720.1 52.632 57 25 2 201 255 240 296 1.45e-11 66.6
Msa1169970 AT1G29280.1 44.762 105 49 3 334 436 42 139 5.95e-19 86.7
Msa1169970 AT1G29280.1 53.333 60 26 2 198 255 72 131 3.14e-13 70.1
Msa1169970 AT2G23320.1 56.250 64 27 1 368 430 236 299 6.78e-19 87.8
Msa1169970 AT2G23320.1 56.140 57 23 2 201 255 241 297 8.59e-14 72.4
Msa1169970 AT1G69810.1 44.000 100 53 3 337 433 167 266 6.86e-19 88.6
Msa1169970 AT4G23550.1 45.783 83 44 1 361 442 129 211 7.12e-19 87.4
Msa1169970 AT4G23550.1 49.296 71 32 3 201 269 141 209 4.98e-11 63.9
Msa1169970 AT4G31800.2 46.591 88 46 1 360 446 99 186 7.30e-19 86.3
Msa1169970 AT4G31800.2 50.877 57 26 2 201 255 112 168 2.62e-13 70.1
Msa1169970 AT1G62300.1 49.315 73 36 1 360 431 300 372 8.10e-19 89.4
Msa1169970 AT1G62300.1 52.632 57 25 2 201 255 313 369 7.63e-12 67.8
Msa1169970 AT4G22070.4 44.048 84 46 1 349 431 274 357 1.00e-18 89.0
Msa1169970 AT4G22070.4 52.632 57 25 2 201 255 298 354 9.06e-12 67.4
Msa1169970 AT4G22070.3 44.048 84 46 1 349 431 274 357 1.00e-18 89.0
Msa1169970 AT4G22070.3 52.632 57 25 2 201 255 298 354 9.06e-12 67.4
Msa1169970 AT4G22070.2 44.048 84 46 1 349 431 274 357 1.00e-18 89.0
Msa1169970 AT4G22070.2 52.632 57 25 2 201 255 298 354 9.06e-12 67.4
Msa1169970 AT4G22070.1 44.048 84 46 1 349 431 274 357 1.00e-18 89.0
Msa1169970 AT4G22070.1 52.632 57 25 2 201 255 298 354 9.06e-12 67.4
Msa1169970 AT4G31800.1 46.591 88 46 1 360 446 164 251 2.06e-18 86.3
Msa1169970 AT4G31800.1 50.877 57 26 2 201 255 177 233 4.39e-13 70.5
Msa1169970 AT1G18860.1 49.315 73 36 1 360 431 227 299 2.12e-18 88.2
Msa1169970 AT1G18860.1 54.386 57 24 2 201 255 240 296 5.39e-11 65.1
Msa1169970 AT2G30590.1 50.000 72 34 2 368 437 309 380 2.22e-18 87.0
Msa1169970 AT2G30590.1 52.055 73 30 4 189 257 301 372 2.78e-14 74.7
Msa1169970 AT2G25000.2 53.846 65 29 1 368 431 99 163 2.56e-18 84.3
Msa1169970 AT2G25000.2 50.877 57 26 2 201 255 104 160 5.22e-12 65.9
Msa1169970 AT2G25000.4 53.846 65 29 1 368 431 99 163 2.56e-18 84.3
Msa1169970 AT2G25000.4 50.877 57 26 2 201 255 104 160 5.22e-12 65.9
Msa1169970 AT5G64810.1 57.377 61 26 0 369 429 107 167 3.02e-18 83.2
Msa1169970 AT5G64810.1 53.448 58 22 2 201 255 111 166 1.95e-11 63.5
Msa1169970 AT1G69310.3 46.835 79 38 1 351 429 126 200 4.62e-18 84.7
Msa1169970 AT2G25000.3 53.846 65 29 1 368 431 121 185 5.52e-18 83.6
Msa1169970 AT2G25000.3 50.877 57 26 2 201 255 126 182 7.90e-12 65.9
Msa1169970 AT4G01250.1 57.353 68 27 2 366 431 121 188 6.29e-18 84.3
Msa1169970 AT4G01250.1 44.737 76 40 2 201 274 129 204 1.44e-12 68.6
Msa1169970 AT4G31550.2 51.613 62 29 1 368 428 241 302 6.54e-18 84.7
Msa1169970 AT4G31550.2 45.833 96 41 4 191 284 237 323 1.53e-15 77.8
Msa1169970 AT4G31550.1 51.613 62 29 1 368 428 242 303 6.80e-18 84.7
Msa1169970 AT4G31550.1 45.833 96 41 4 191 284 238 324 1.59e-15 77.8
Msa1169970 AT2G25000.1 53.846 65 29 1 368 431 142 206 7.29e-18 84.0
Msa1169970 AT2G25000.1 50.877 57 26 2 201 255 147 203 1.10e-11 65.5
Msa1169970 AT3G04670.1 49.315 73 36 1 368 439 258 330 8.45e-18 84.7
Msa1169970 AT3G04670.1 52.055 73 30 4 189 257 250 321 5.71e-14 73.2
Msa1169970 AT5G43290.1 58.929 56 23 0 373 428 115 170 1.31e-17 83.2
Msa1169970 AT5G43290.1 52.778 72 33 1 185 255 99 170 1.41e-14 74.3
Msa1169970 AT5G52830.1 43.878 98 39 2 335 431 143 225 1.76e-17 84.0
Msa1169970 AT5G52830.1 48.611 72 35 2 199 268 164 235 1.10e-13 72.4
Msa1169970 AT5G28650.1 46.575 73 38 1 368 439 258 330 4.07e-17 82.8
Msa1169970 AT5G28650.1 50.685 73 31 4 189 257 250 321 3.09e-13 70.9
Msa1169970 AT3G58710.1 40.000 115 60 3 334 446 39 146 6.85e-17 80.9
Msa1169970 AT3G58710.1 51.667 60 27 2 198 255 69 128 5.55e-12 66.6
Msa1169970 AT2G24570.1 48.810 84 40 3 191 272 235 317 7.65e-17 81.6
Msa1169970 AT2G24570.1 49.206 63 31 1 368 429 239 301 1.91e-16 80.5
Msa1169970 AT2G34830.1 44.898 98 47 3 337 433 186 277 1.17e-16 82.0
Msa1169970 AT2G34830.1 52.632 57 25 2 201 255 216 272 3.41e-11 65.5
Msa1169970 AT2G34830.2 44.898 98 47 3 337 433 195 286 1.35e-16 82.0
Msa1169970 AT2G34830.2 52.632 57 25 2 201 255 225 281 3.63e-11 65.5
Msa1169970 AT3G58710.2 41.071 112 57 3 337 446 41 145 1.47e-16 80.1
Msa1169970 AT3G58710.2 51.667 60 27 2 198 255 68 127 5.80e-12 66.2
Msa1169970 AT1G30650.1 43.878 98 48 3 337 433 188 279 2.46e-16 81.3
Msa1169970 AT2G46130.2 47.887 71 33 1 358 428 16 82 1.78e-15 72.4
Msa1169970 AT2G46130.2 57.143 56 19 2 201 255 31 82 9.28e-12 62.0
Msa1169970 AT5G45050.1 48.077 104 37 5 335 435 1156 1245 2.11e-15 79.7
Msa1169970 AT5G45050.4 48.077 104 37 5 335 435 1017 1106 2.18e-15 79.3
Msa1169970 AT5G45050.2 48.077 104 37 5 335 435 1128 1217 2.51e-15 79.3
Msa1169970 AT1G66560.1 57.895 57 21 1 373 426 104 160 1.08e-14 73.9
Msa1169970 AT2G40740.1 38.542 96 47 2 334 426 144 230 1.28e-13 71.6
Msa1169970 AT2G40740.1 44.156 77 36 3 184 253 154 230 1.98e-13 71.2
Msa1169970 AT2G40740.3 38.542 96 47 2 334 426 153 239 1.58e-13 71.6
Msa1169970 AT2G40740.3 44.156 77 36 3 184 253 163 239 2.38e-13 70.9
Msa1169970 AT1G66550.1 40.625 96 46 3 336 426 76 165 7.04e-13 68.9
Msa1169970 AT1G66550.2 52.632 57 24 1 373 426 104 160 1.13e-12 68.2
Msa1169970 AT1G80590.1 46.774 62 30 1 373 431 86 147 1.21e-11 65.1
Msa1169970 AT4G11070.2 49.180 61 25 3 198 253 107 166 2.68e-11 64.7
Msa1169970 AT4G11070.2 54.386 57 23 1 373 426 110 166 2.68e-11 64.7
Msa1169970 AT4G11070.1 49.180 61 25 3 198 253 139 198 3.26e-11 64.7
Msa1169970 AT4G11070.1 54.386 57 23 1 373 426 142 198 3.29e-11 64.7
Msa1169970 AT5G24110.1 46.032 63 30 2 195 253 108 170 3.96e-11 64.3
Msa1169970 AT4G23810.1 44.444 81 41 2 373 449 159 239 4.76e-11 64.3
Msa1169970 AT4G23810.1 46.667 60 28 2 198 253 156 215 7.36e-11 63.5
Msa1169970 AT3G56400.1 43.077 65 34 1 365 426 113 177 6.78e-11 63.5
Msa1169970 AT5G45260.1 31.618 136 73 4 316 448 1169 1287 8.67e-11 65.1
Msa1169970 AT1G66600.1 49.153 59 27 1 371 426 102 160 9.83e-11 62.4

Find 112 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTCAGTTTCATGCATTT+TGG 0.090215 7_4:-63075544 Msa1169970:five_prime_UTR
TCTTATAGATGGTGACAATT+TGG 0.209293 7_4:-63071606 Msa1169970:three_prime_UTR
GGCTTTCGCTGGAGGAAATA+TGG 0.218614 7_4:-63072320 Msa1169970:CDS
CAACAGTTGGTCTTGGAATT+TGG 0.227335 7_4:-63071529 Msa1169970:three_prime_UTR
GGCTTGAACCTCACTGTCTT+TGG 0.252094 7_4:+63074654 None:intergenic
TATGTAGTCACAAATGATTT+TGG 0.264303 7_4:+63071790 None:intergenic
GGATATAACTGGAGAAAATA+TGG 0.302862 7_4:-63073350 Msa1169970:CDS
ATTGCAGAAATTGTTTATAA+AGG 0.309738 7_4:-63073224 Msa1169970:CDS
AATAAATAAAAGTGTCAATA+TGG 0.322332 7_4:+63071675 None:intergenic
TATGGACAGAAGCAAGTAAA+AGG 0.334183 7_4:-63073332 Msa1169970:CDS
CCTCACTGTCTTTGGCCTAA+TGG 0.341358 7_4:+63074662 None:intergenic
GATTGATTGGTATCAGGTTT+GGG 0.346071 7_4:+63074291 None:intergenic
AAAAGTATAAACCTGGGATA+TGG 0.347198 7_4:+63072275 None:intergenic
ATGAGAGATTGATTGGTATC+AGG 0.351230 7_4:+63074285 None:intergenic
AGATTGATTGGTATCAGGTT+TGG 0.354034 7_4:+63074290 None:intergenic
TCCATTGATTTCTGTGGTTG+TGG 0.361586 7_4:+63073560 None:intergenic
GCTTTGGATCCTCTTATAGA+TGG 0.369415 7_4:-63071617 Msa1169970:three_prime_UTR
GAATGGTTCAAGATAAAGTA+TGG 0.369467 7_4:-63073130 Msa1169970:CDS
GAATCAAAGCTGTCACTCTT+TGG 0.373481 7_4:-63075505 Msa1169970:five_prime_UTR
GTTATTATGACTAAATGCTT+TGG 0.374806 7_4:-63071633 Msa1169970:three_prime_UTR
TTGCCAAACCAGTTGCTTCA+AGG 0.393390 7_4:-63074779 Msa1169970:CDS
CTTCGTATGATGGATATAAC+TGG 0.406141 7_4:-63073361 Msa1169970:CDS
AGACAGAAAATGAATGGAAA+AGG 0.408346 7_4:+63075759 None:intergenic
GTAGTTTGAGAAGATGCAAT+TGG 0.426919 7_4:+63074693 None:intergenic
AGGCCTTGAAGCAACTGGTT+TGG 0.438001 7_4:+63074776 None:intergenic
GAAAATTCTTGTGGTCTAAG+TGG 0.439008 7_4:-63073023 Msa1169970:CDS
TTTGTAAATGAGAGATTGAT+TGG 0.444415 7_4:+63074278 None:intergenic
CAAGTAGGCCTTGAAGCAAC+TGG 0.450411 7_4:+63074771 None:intergenic
CCTTCCTACAGAAACATATC+AGG 0.450501 7_4:-63073465 Msa1169970:CDS
AAACTACAATATCCGCCATT+AGG 0.452468 7_4:-63074677 Msa1169970:CDS
AGTTGTCATGGTTAAGATGC+TGG 0.454295 7_4:+63073528 None:intergenic
CGAAACTCGGGAGCAACATC+AGG 0.455548 7_4:-63073167 Msa1169970:CDS
AATAGCATTAAAATTATTGA+AGG 0.460247 7_4:+63071457 None:intergenic
TCCTTGGAGATGGCTTTCGC+TGG 0.465481 7_4:-63072331 Msa1169970:CDS
TTTGATGTTGTTGCTTTCCA+TGG 0.466974 7_4:+63073192 None:intergenic
TTGATGACAACAGTTGGTCT+TGG 0.468035 7_4:-63071536 Msa1169970:three_prime_UTR
GCTGATAGACCTTCGTATGA+TGG 0.469002 7_4:-63073371 Msa1169970:CDS
GAACTTTGCATTACAATGCC+TGG 0.474338 7_4:+63072368 None:intergenic
TGTTCTTGAGTGGCATCTCA+TGG 0.484881 7_4:+63071752 None:intergenic
AATCAGAATGAAAGGAATGA+AGG 0.486904 7_4:-63073095 Msa1169970:CDS
GGAAGGAAGCAAAGGATTTG+AGG 0.487549 7_4:-63072991 Msa1169970:CDS
AAAGTTGAAAGATCATTAGA+TGG 0.489403 7_4:-63073251 Msa1169970:CDS
CTAACCAGACAGAAAATGAA+TGG 0.490237 7_4:+63075753 None:intergenic
AAAATTCTTGTGGTCTAAGT+GGG 0.492248 7_4:-63073022 Msa1169970:CDS
AGGTCTATCAGCATTATTTG+TGG 0.494075 7_4:+63073382 None:intergenic
ATATGGGCAGAAGGTGGTGA+AGG 0.494098 7_4:-63072303 Msa1169970:CDS
AAATTGTCACCATCTATAAG+AGG 0.505697 7_4:+63071608 None:intergenic
GAGGAAGGTTTAGTAGAGCC+AGG 0.508048 7_4:-63072386 Msa1169970:CDS
GCTTTCGCTGGAGGAAATAT+GGG 0.508332 7_4:-63072319 Msa1169970:CDS
GTGCACTTGTAGTAACTTCG+AGG 0.512042 7_4:+63073299 None:intergenic
GACAGAAAATGAATGGAAAA+GGG 0.512758 7_4:+63075760 None:intergenic
CAACATTTGATGACAACAGT+TGG 0.513978 7_4:-63071542 Msa1169970:three_prime_UTR
ATGGTTAAGATGCTGGGGAT+TGG 0.515953 7_4:+63073535 None:intergenic
TTGGTCTTGGAATTTGGTGT+TGG 0.516413 7_4:-63071523 Msa1169970:three_prime_UTR
AGAAGATGCAATTGGAGGAG+TGG 0.518935 7_4:+63074701 None:intergenic
GATTCTGAAGTCCTTGGAGA+TGG 0.520543 7_4:-63072341 Msa1169970:CDS
ACAGACAACTGTATCTCTCT+TGG 0.520560 7_4:-63074235 Msa1169970:CDS
AGGAATGATTTCTGATGGAA+TGG 0.520627 7_4:-63073147 Msa1169970:CDS
CTAAGTGGGGAATGTGAGGA+AGG 0.529724 7_4:-63073008 Msa1169970:CDS
TCTTTCTCAGAGCTTCTAGC+AGG 0.530251 7_4:-63074735 Msa1169970:CDS
TCATTTGTGACTACATATGA+AGG 0.531295 7_4:-63071784 Msa1169970:CDS
GTTGTCATGGTTAAGATGCT+GGG 0.534264 7_4:+63073529 None:intergenic
GTTTGAGAAGATGCAATTGG+AGG 0.534896 7_4:+63074696 None:intergenic
GTAAATATCCTAGTCTCTGT+AGG 0.538953 7_4:+63071574 None:intergenic
GTGGCCTGATATGTTTCTGT+AGG 0.540476 7_4:+63073461 None:intergenic
CATTGTAATGCAAAGTTCTG+TGG 0.543269 7_4:-63072363 Msa1169970:CDS
TCTGTGGATTCTGAAGTCCT+TGG 0.545629 7_4:-63072347 Msa1169970:CDS
ACAACATCAAAAGCGAAACT+CGG 0.546405 7_4:-63073180 Msa1169970:CDS
CAACATCAAAAGCGAAACTC+GGG 0.546522 7_4:-63073179 Msa1169970:CDS
TGGTCCTCCTCCATGTTCTG+TGG 0.546595 7_4:+63073419 None:intergenic
ATAATAGTAATCAGAATGAA+AGG 0.547394 7_4:-63073103 Msa1169970:CDS
TGAGAATCAATCAAATGAAG+TGG 0.547618 7_4:-63072417 Msa1169970:CDS
ATTGTTGTTGTGTTCTTGAG+TGG 0.548207 7_4:+63071742 None:intergenic
TTGGAGATGGCTTTCGCTGG+AGG 0.549285 7_4:-63072328 Msa1169970:CDS
TTGGTCTCCATTGATTTCTG+TGG 0.552337 7_4:+63073554 None:intergenic
CCTGATATGTTTCTGTAGGA+AGG 0.552344 7_4:+63073465 None:intergenic
TACGATGGCACCACAGAACA+TGG 0.559539 7_4:-63073429 Msa1169970:CDS
TGTTAGCTCTAAAGTTGTCA+TGG 0.561387 7_4:+63073516 None:intergenic
GCCACAACCACAGAAATCAA+TGG 0.564697 7_4:-63073561 Msa1169970:CDS
CTATCAGCATTATTTGTGGA+TGG 0.565274 7_4:+63073386 None:intergenic
CGAAACATAGCAGTTCATGA+TGG 0.570030 7_4:-63074829 Msa1169970:intron
TTTGCTCTAGAAAATTCTTG+TGG 0.572340 7_4:-63073032 Msa1169970:CDS
ACATCAGGAATGATTTCTGA+TGG 0.574578 7_4:-63073152 Msa1169970:CDS
CTGATATGTTTCTGTAGGAA+GGG 0.576441 7_4:+63073466 None:intergenic
AAGCAAAGGATTTGAGGCAG+AGG 0.578305 7_4:-63072985 Msa1169970:CDS
TGTATCTCTCTTGGCAAACA+TGG 0.578873 7_4:-63074226 Msa1169970:intron
AAATGAAGTGGCAGTATCAG+AGG 0.580061 7_4:-63072405 Msa1169970:CDS
ATCTCTCATTTACAAACCAA+TGG 0.583964 7_4:-63074271 Msa1169970:CDS
TTAAAATTATTGAAGGACAA+TGG 0.592124 7_4:+63071464 None:intergenic
ACTTAGCAGCTCTTCTGACA+TGG 0.600508 7_4:-63074316 Msa1169970:CDS
ATGACCCTAGAAGTAAAAGA+AGG 0.603029 7_4:-63072959 Msa1169970:intron
CTGGAGGAAATATGGGCAGA+AGG 0.603595 7_4:-63072312 Msa1169970:CDS
GGCCACAGAATCTTGTACGA+TGG 0.604701 7_4:-63073444 Msa1169970:CDS
CTGCAATGTTCGCAAGCACG+TGG 0.606464 7_4:-63071830 Msa1169970:CDS
TGAAGGGAAATCCATATCCC+AGG 0.606812 7_4:-63072286 Msa1169970:intron
CACTGTCTTTGGCCTAATGG+CGG 0.608617 7_4:+63074665 None:intergenic
TATGGGCAGAAGGTGGTGAA+GGG 0.615897 7_4:-63072302 Msa1169970:CDS
GAATGTGAGGAAGGAAGCAA+AGG 0.620452 7_4:-63072999 Msa1169970:CDS
TGCCATCGTACAAGATTCTG+TGG 0.625393 7_4:+63073442 None:intergenic
GGCACCACAGAACATGGAGG+AGG 0.626068 7_4:-63073423 Msa1169970:CDS
TTGTCATGGTTAAGATGCTG+GGG 0.628493 7_4:+63073530 None:intergenic
ATGTAGTACCTACAGAGACT+AGG 0.628919 7_4:-63071582 Msa1169970:three_prime_UTR
TCCAGCGAAAGCCATCTCCA+AGG 0.633371 7_4:+63072330 None:intergenic
GAAGTGGCAGTATCAGAGGA+AGG 0.639135 7_4:-63072401 Msa1169970:CDS
TATAAAGGTGAACACAACCA+TGG 0.664705 7_4:-63073209 Msa1169970:CDS
GAGGAAATATGGGCAGAAGG+TGG 0.666250 7_4:-63072309 Msa1169970:CDS
TGGTCTAAGTGGGGAATGTG+AGG 0.674654 7_4:-63073012 Msa1169970:CDS
AAATTATTGAAGGACAATGG+TGG 0.675330 7_4:+63071467 None:intergenic
AAATTCTTGTGGTCTAAGTG+GGG 0.680578 7_4:-63073021 Msa1169970:CDS
GATTTGTATGAAGAACAAGT+AGG 0.690839 7_4:+63074756 None:intergenic
CAGTTATATCCATCATACGA+AGG 0.693969 7_4:+63073362 None:intergenic
GATGGCACCACAGAACATGG+AGG 0.771341 7_4:-63073426 Msa1169970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATGAAAAC+TGG + chr7_4:63074522-63074541 None:intergenic 10.0%
!!! GATTTTTAATTTTAATTCAT+TGG - chr7_4:63074611-63074630 Msa1169970:intron 10.0%
!!! CATGATAAATTTTTAATTAA+AGG - chr7_4:63074732-63074751 Msa1169970:CDS 10.0%
!!! AGCATTTTTTGAATTTTTTA+TGG - chr7_4:63071579-63071598 Msa1169970:three_prime_UTR 15.0%
!! TTTATGGTTATATATATTGT+AGG - chr7_4:63071595-63071614 Msa1169970:three_prime_UTR 15.0%
!!! TACTTGAATTTTGTTTTTTT+AGG - chr7_4:63072002-63072021 Msa1169970:intron 15.0%
!!! GTTTCTTTTTATTTATTTTC+AGG + chr7_4:63074301-63074320 None:intergenic 15.0%
!! TTTATCATGAAAAATTAGTT+AGG + chr7_4:63074721-63074740 None:intergenic 15.0%
!!! AATAAATAAAAGTGTCAATA+TGG + chr7_4:63075538-63075557 None:intergenic 15.0%
!! AATAGCATTAAAATTATTGA+AGG + chr7_4:63075756-63075775 None:intergenic 15.0%
!!! TTTTTTATGCTTTGGTTATT+AGG - chr7_4:63071873-63071892 Msa1169970:intron 20.0%
!! TTATCTCACAAATCAATAAA+TGG + chr7_4:63072057-63072076 None:intergenic 20.0%
!! TTAATATAAACAGTTGCATT+AGG - chr7_4:63072225-63072244 Msa1169970:intron 20.0%
!! CAAACACAAAGATTTAATAA+TGG + chr7_4:63072253-63072272 None:intergenic 20.0%
!!! CAATGTTTTAAAAACCAAAT+CGG + chr7_4:63072794-63072813 None:intergenic 20.0%
!!! TACTATTTTAAAATGCTTCT+TGG - chr7_4:63072817-63072836 Msa1169970:intron 20.0%
!! AAGATTAACATTATATGTGA+GGG - chr7_4:63073219-63073238 Msa1169970:CDS 20.0%
!!! AAACCTATCATAGATTTTTT+TGG - chr7_4:63073310-63073329 Msa1169970:CDS 20.0%
!! ATATAAACGATGTTTATAAG+TGG - chr7_4:63073411-63073430 Msa1169970:CDS 20.0%
!! TATAAACGATGTTTATAAGT+GGG - chr7_4:63073412-63073431 Msa1169970:CDS 20.0%
!! ATTGCAGAAATTGTTTATAA+AGG - chr7_4:63073986-63074005 Msa1169970:intron 20.0%
!! ATAATAGTAATCAGAATGAA+AGG - chr7_4:63074107-63074126 Msa1169970:intron 20.0%
!! TATTTGTGACATAATTTCTT+CGG - chr7_4:63074635-63074654 Msa1169970:intron 20.0%
!! GTAACATATTAGTGATTATA+AGG - chr7_4:63074693-63074712 Msa1169970:CDS 20.0%
!! TTAAAAGTTTCTCATTCTTT+AGG - chr7_4:63074765-63074784 Msa1169970:CDS 20.0%
!! TTATAATTTCAGAGACAAAA+AGG + chr7_4:63075133-63075152 None:intergenic 20.0%
!!! AACTTAACTGATAAATGTTT+TGG + chr7_4:63075164-63075183 None:intergenic 20.0%
!! AGTATAAAGAAAAAGATACT+AGG + chr7_4:63075288-63075307 None:intergenic 20.0%
!! TTAAAATTATTGAAGGACAA+TGG + chr7_4:63075749-63075768 None:intergenic 20.0%
! TAAAAAAAGAGAAGTGGTTA+TGG + chr7_4:63071860-63071879 None:intergenic 25.0%
! AAAGCATAAAAAAAGAGAAG+TGG + chr7_4:63071866-63071885 None:intergenic 25.0%
!!! ACTTCTCTTTTTTTATGCTT+TGG - chr7_4:63071865-63071884 Msa1169970:intron 25.0%
!!! TCAAGTAGACCATTTTTTAA+TGG + chr7_4:63071989-63072008 None:intergenic 25.0%
! ATTTGTGAGATAATGATACA+GGG - chr7_4:63072064-63072083 Msa1169970:intron 25.0%
!! AATCGTTTAAAGCTATATCT+AGG - chr7_4:63072126-63072145 Msa1169970:intron 25.0%
!! ATCGTTTAAAGCTATATCTA+GGG - chr7_4:63072127-63072146 Msa1169970:intron 25.0%
! GATTTATACTTATCAATGGT+AGG + chr7_4:63072312-63072331 None:intergenic 25.0%
! AAGGGATTTATACTTATCAA+TGG + chr7_4:63072316-63072335 None:intergenic 25.0%
!!! GTTTTTAAAACACTGCATTA+TGG + chr7_4:63072628-63072647 None:intergenic 25.0%
!! CAAAAATATTAGCCTGTAAT+TGG + chr7_4:63072867-63072886 None:intergenic 25.0%
!! CAATTACAGGCTAATATTTT+TGG - chr7_4:63072865-63072884 Msa1169970:intron 25.0%
! TTTGTAAATGAGAGATTGAT+TGG + chr7_4:63072935-63072954 None:intergenic 25.0%
! ACAAACGAAGGATTATATAT+AGG + chr7_4:63073102-63073121 None:intergenic 25.0%
! AATGATGAGTTTATTCAGAA+AGG - chr7_4:63073148-63073167 Msa1169970:CDS 25.0%
! CAAGATTAACATTATATGTG+AGG - chr7_4:63073218-63073237 Msa1169970:CDS 25.0%
!! ATTAGCTTATAGAGTTAAGT+TGG - chr7_4:63073258-63073277 Msa1169970:CDS 25.0%
! TTAGCTTATAGAGTTAAGTT+GGG - chr7_4:63073259-63073278 Msa1169970:CDS 25.0%
! ATAAACGATGTTTATAAGTG+GGG - chr7_4:63073413-63073432 Msa1169970:CDS 25.0%
!! TACCTCTTTTTATCTTCTTT+TGG - chr7_4:63073601-63073620 Msa1169970:CDS 25.0%
!!! TTTTTATCTTCTTTTGGAGA+AGG - chr7_4:63073607-63073626 Msa1169970:CDS 25.0%
!!! TTTTATCTTCTTTTGGAGAA+GGG - chr7_4:63073608-63073627 Msa1169970:CDS 25.0%
!!! TTCTTTTTAACTGGACAATT+AGG + chr7_4:63073941-63073960 None:intergenic 25.0%
!! CTTTCAACTTTCTTTTTAAC+TGG + chr7_4:63073950-63073969 None:intergenic 25.0%
! AAAGTTGAAAGATCATTAGA+TGG - chr7_4:63073959-63073978 Msa1169970:intron 25.0%
!!! TTTTCTAGAGCAAAATCATT+AGG + chr7_4:63074172-63074191 None:intergenic 25.0%
!! ATAACCTTCTTTTACTTCTA+GGG + chr7_4:63074258-63074277 None:intergenic 25.0%
!! AATAACCTTCTTTTACTTCT+AGG + chr7_4:63074259-63074278 None:intergenic 25.0%
! ATTTGCAATGTTTCAAAAAC+TGG - chr7_4:63074397-63074416 Msa1169970:intron 25.0%
! ATCACTAATATGTTACTGTA+TGG + chr7_4:63074689-63074708 None:intergenic 25.0%
!! AAGAAGAAAAGTATAAACCT+GGG + chr7_4:63074944-63074963 None:intergenic 25.0%
!! TTAGGTACTAATTTTACAGA+TGG + chr7_4:63075096-63075115 None:intergenic 25.0%
!!! TTGTCTCTGAAATTATAACA+TGG - chr7_4:63075135-63075154 Msa1169970:intron 25.0%
! AGTTAAGTTCAATTGTTAGA+TGG - chr7_4:63075175-63075194 Msa1169970:intron 25.0%
!! TATGTAGTCACAAATGATTT+TGG + chr7_4:63075423-63075442 None:intergenic 25.0%
! GTTATTATGACTAAATGCTT+TGG - chr7_4:63075577-63075596 Msa1169970:intron 25.0%
! TTTTCCATTCATTTTCTGTC+TGG - chr7_4:63071453-63071472 Msa1169970:three_prime_UTR 30.0%
TGAAATCTATAATTGGGCTT+GGG + chr7_4:63071556-63071575 None:intergenic 30.0%
ATGAAATCTATAATTGGGCT+TGG + chr7_4:63071557-63071576 None:intergenic 30.0%
AAGCCCAATTATAGATTTCA+TGG - chr7_4:63071556-63071575 Msa1169970:three_prime_UTR 30.0%
GCTCCATGAAATCTATAATT+GGG + chr7_4:63071562-63071581 None:intergenic 30.0%
TGCTCCATGAAATCTATAAT+TGG + chr7_4:63071563-63071582 None:intergenic 30.0%
! TAACTCAGTTTCATGCATTT+TGG - chr7_4:63071666-63071685 Msa1169970:three_prime_UTR 30.0%
! AACTCAGTTTCATGCATTTT+GGG - chr7_4:63071667-63071686 Msa1169970:three_prime_UTR 30.0%
!! GTTAAGTTAGAGCTTTTTCT+TGG - chr7_4:63071731-63071750 Msa1169970:CDS 30.0%
ATCAAACATGCACGATAATT+AGG + chr7_4:63071781-63071800 None:intergenic 30.0%
AAGACCTCACCATTAAAAAA+TGG - chr7_4:63071977-63071996 Msa1169970:intron 30.0%
!!! TAGACCATTTTTTAATGGTG+AGG + chr7_4:63071984-63072003 None:intergenic 30.0%
GATTTGTGAGATAATGATAC+AGG - chr7_4:63072063-63072082 Msa1169970:intron 30.0%
TAACTTAATCCTTCCCATTA+AGG + chr7_4:63072106-63072125 None:intergenic 30.0%
CAACAACTCAAAGTTTCAAA+GGG + chr7_4:63072199-63072218 None:intergenic 30.0%
TCAACAACTCAAAGTTTCAA+AGG + chr7_4:63072200-63072219 None:intergenic 30.0%
TATACTTATCAATGGTAGGT+AGG + chr7_4:63072308-63072327 None:intergenic 30.0%
!!! AATCCCTTGTTAGTTTTTGA+AGG - chr7_4:63072328-63072347 Msa1169970:CDS 30.0%
TCACCTTCAAAAACTAACAA+GGG + chr7_4:63072334-63072353 None:intergenic 30.0%
TTCACCTTCAAAAACTAACA+AGG + chr7_4:63072335-63072354 None:intergenic 30.0%
GATTTGTATGAAGAACAAGT+AGG + chr7_4:63072457-63072476 None:intergenic 30.0%
!! GTTGTGTTTTTACCAATTAC+AGG - chr7_4:63072852-63072871 Msa1169970:intron 30.0%
!!! TTACAGGCTAATATTTTTGG+AGG - chr7_4:63072868-63072887 Msa1169970:intron 30.0%
ATCTCTCATTTACAAACCAA+TGG - chr7_4:63072939-63072958 Msa1169970:intron 30.0%
ACGAAAAAGATTACAAACGA+AGG + chr7_4:63073114-63073133 None:intergenic 30.0%
TAAACTCATCATTGATCACT+TGG + chr7_4:63073141-63073160 None:intergenic 30.0%
AGAAAGGTTATTCTTCATAG+TGG - chr7_4:63073164-63073183 Msa1169970:CDS 30.0%
GGTCCAAAAAAATCTATGAT+AGG + chr7_4:63073316-63073335 None:intergenic 30.0%
TGGAAATTTCCGTTAGAATT+TGG + chr7_4:63073490-63073509 None:intergenic 30.0%
!!! ATATAGCGGATGATGTTTTT+TGG + chr7_4:63073510-63073529 None:intergenic 30.0%
AGTCACTAACACAAATATAG+CGG + chr7_4:63073524-63073543 None:intergenic 30.0%
!! TCTCTTTTCAATTTGAGACT+TGG - chr7_4:63073563-63073582 Msa1169970:CDS 30.0%
CTCCAAAAGAAGATAAAAAG+AGG + chr7_4:63073606-63073625 None:intergenic 30.0%
GGATATAACTGGAGAAAATA+TGG - chr7_4:63073860-63073879 Msa1169970:intron 30.0%
GAATGGTTCAAGATAAAGTA+TGG - chr7_4:63074080-63074099 Msa1169970:intron 30.0%
AATCAGAATGAAAGGAATGA+AGG - chr7_4:63074115-63074134 Msa1169970:intron 30.0%
!! TTTGCTCTAGAAAATTCTTG+TGG - chr7_4:63074178-63074197 Msa1169970:intron 30.0%
AAAATTCTTGTGGTCTAAGT+GGG - chr7_4:63074188-63074207 Msa1169970:intron 30.0%
TCAATGAAACATCCAAATCA+TGG + chr7_4:63074576-63074595 None:intergenic 30.0%
TGAGAATCAATCAAATGAAG+TGG - chr7_4:63074793-63074812 Msa1169970:CDS 30.0%
! AAAAGTATAAACCTGGGATA+TGG + chr7_4:63074938-63074957 None:intergenic 30.0%
! GAAGAAGAAAAGTATAAACC+TGG + chr7_4:63074945-63074964 None:intergenic 30.0%
TCAAGATTACTTATACAGCA+AGG - chr7_4:63074999-63075018 Msa1169970:intron 30.0%
TTCTAAATTCTGCTATGCAT+CGG - chr7_4:63075022-63075041 Msa1169970:intron 30.0%
! AAGGCTAATTTGCAAAAGTT+AGG + chr7_4:63075114-63075133 None:intergenic 30.0%
TCATTTGTGACTACATATGA+AGG - chr7_4:63075426-63075445 Msa1169970:intron 30.0%
!!! AGTCATTGAATCTTTTTCAG+AGG + chr7_4:63075496-63075515 None:intergenic 30.0%
AAATTGTCACCATCTATAAG+AGG + chr7_4:63075605-63075624 None:intergenic 30.0%
TCTTATAGATGGTGACAATT+TGG - chr7_4:63075604-63075623 Msa1169970:intron 30.0%
AAATTATTGAAGGACAATGG+TGG + chr7_4:63075746-63075765 None:intergenic 30.0%
CTAACCAGACAGAAAATGAA+TGG + chr7_4:63071460-63071479 None:intergenic 35.0%
!!! TATTTTGACCCTTGTAATGC+AGG - chr7_4:63071632-63071651 Msa1169970:three_prime_UTR 35.0%
ATCGTGCATGTTTGATATCA+CGG - chr7_4:63071785-63071804 Msa1169970:CDS 35.0%
TGGTTATGGATATGCATGTT+TGG + chr7_4:63071846-63071865 None:intergenic 35.0%
CTTTGGTTATTAGGCTTTCA+AGG - chr7_4:63071882-63071901 Msa1169970:intron 35.0%
! CTGCTAAAAAGTTCCCTTTT+TGG - chr7_4:63071914-63071933 Msa1169970:intron 35.0%
! CTAAAAAGTTCCCTTTTTGG+CGG - chr7_4:63071917-63071936 Msa1169970:intron 35.0%
!! TAAAAAGTTCCCTTTTTGGC+GGG - chr7_4:63071918-63071937 Msa1169970:intron 35.0%
AATGCTAACACATGCCTTAA+TGG - chr7_4:63072089-63072108 Msa1169970:intron 35.0%
ATGCTAACACATGCCTTAAT+GGG - chr7_4:63072090-63072109 Msa1169970:intron 35.0%
GTAGTTTGAGAAGATGCAAT+TGG + chr7_4:63072520-63072539 None:intergenic 35.0%
AAACTACAATATCCGCCATT+AGG - chr7_4:63072533-63072552 Msa1169970:intron 35.0%
ATCAGTTGGAACTTTCAGTT+CGG + chr7_4:63072650-63072669 None:intergenic 35.0%
AAATAACCACACCGTAGTAA+TGG + chr7_4:63072688-63072707 None:intergenic 35.0%
! TTACTACGGTGTGGTTATTT+TGG - chr7_4:63072688-63072707 Msa1169970:intron 35.0%
GATTGATTGGTATCAGGTTT+GGG + chr7_4:63072922-63072941 None:intergenic 35.0%
AGATTGATTGGTATCAGGTT+TGG + chr7_4:63072923-63072942 None:intergenic 35.0%
ATGAGAGATTGATTGGTATC+AGG + chr7_4:63072928-63072947 None:intergenic 35.0%
! TGTGACACAAATTTTGCCAT+TGG + chr7_4:63072958-63072977 None:intergenic 35.0%
!!! TCATAGTGGATGTTTTGAGA+TGG - chr7_4:63073178-63073197 Msa1169970:CDS 35.0%
TTTCCGTTAGAATTTGGTCT+TGG + chr7_4:63073484-63073503 None:intergenic 35.0%
!! TGTTAGCTCTAAAGTTGTCA+TGG + chr7_4:63073697-63073716 None:intergenic 35.0%
! CTGATATGTTTCTGTAGGAA+GGG + chr7_4:63073747-63073766 None:intergenic 35.0%
!! TTGTGGATGGTAATGCTTTT+TGG + chr7_4:63073814-63073833 None:intergenic 35.0%
CTATCAGCATTATTTGTGGA+TGG + chr7_4:63073827-63073846 None:intergenic 35.0%
AGGTCTATCAGCATTATTTG+TGG + chr7_4:63073831-63073850 None:intergenic 35.0%
CAGTTATATCCATCATACGA+AGG + chr7_4:63073851-63073870 None:intergenic 35.0%
!! CTTCGTATGATGGATATAAC+TGG - chr7_4:63073849-63073868 Msa1169970:intron 35.0%
TATGGACAGAAGCAAGTAAA+AGG - chr7_4:63073878-63073897 Msa1169970:intron 35.0%
TATAAAGGTGAACACAACCA+TGG - chr7_4:63074001-63074020 Msa1169970:intron 35.0%
!! TTTGATGTTGTTGCTTTCCA+TGG + chr7_4:63074021-63074040 None:intergenic 35.0%
ACAACATCAAAAGCGAAACT+CGG - chr7_4:63074030-63074049 Msa1169970:intron 35.0%
ACATCAGGAATGATTTCTGA+TGG - chr7_4:63074058-63074077 Msa1169970:intron 35.0%
AGGAATGATTTCTGATGGAA+TGG - chr7_4:63074063-63074082 Msa1169970:intron 35.0%
GAAAATTCTTGTGGTCTAAG+TGG - chr7_4:63074187-63074206 Msa1169970:intron 35.0%
AAATTCTTGTGGTCTAAGTG+GGG - chr7_4:63074189-63074208 Msa1169970:intron 35.0%
ATGACCCTAGAAGTAAAAGA+AGG - chr7_4:63074251-63074270 Msa1169970:CDS 35.0%
ACAGAGAAGAAAAACACACT+AGG - chr7_4:63074319-63074338 Msa1169970:CDS 35.0%
CATTGTAATGCAAAGTTCTG+TGG - chr7_4:63074847-63074866 Msa1169970:intron 35.0%
! GCCTATGTACTCGATATTTT+GGG + chr7_4:63075048-63075067 None:intergenic 35.0%
! TGCCTATGTACTCGATATTT+TGG + chr7_4:63075049-63075068 None:intergenic 35.0%
TTACAGATGGCTACAATTTC+AGG + chr7_4:63075083-63075102 None:intergenic 35.0%
! ATTGTTGTTGTGTTCTTGAG+TGG + chr7_4:63075471-63075490 None:intergenic 35.0%
GTAAATATCCTAGTCTCTGT+AGG + chr7_4:63075639-63075658 None:intergenic 35.0%
! CAACATTTGATGACAACAGT+TGG - chr7_4:63075668-63075687 Msa1169970:intron 35.0%
TAACCTCTCCTGCATTACAA+GGG + chr7_4:63071643-63071662 None:intergenic 40.0%
TTAACCTCTCCTGCATTACA+AGG + chr7_4:63071644-63071663 None:intergenic 40.0%
GAATCAAAGCTGTCACTCTT+TGG - chr7_4:63071705-63071724 Msa1169970:CDS 40.0%
!! AAAAAGTTCCCTTTTTGGCG+GGG - chr7_4:63071919-63071938 Msa1169970:intron 40.0%
GTTCGTTCCAAAGACATGAA+AGG + chr7_4:63072033-63072052 None:intergenic 40.0%
TAACACATGCCTTAATGGGA+AGG - chr7_4:63072094-63072113 Msa1169970:intron 40.0%
GCTATATCTAGGGATACACT+AGG - chr7_4:63072137-63072156 Msa1169970:intron 40.0%
CGAAACATAGCAGTTCATGA+TGG - chr7_4:63072381-63072400 Msa1169970:CDS 40.0%
GTTTGAGAAGATGCAATTGG+AGG + chr7_4:63072517-63072536 None:intergenic 40.0%
ACTGAATGTTCACCTGAGAA+GGG + chr7_4:63072597-63072616 None:intergenic 40.0%
CCAACTGATTGAACCTTGAA+CGG - chr7_4:63072661-63072680 Msa1169970:intron 40.0%
!!! TAGTTTTGTCTCGATTCGAG+CGG - chr7_4:63072722-63072741 Msa1169970:intron 40.0%
ACAGACAACTGTATCTCTCT+TGG - chr7_4:63072975-63072994 Msa1169970:CDS 40.0%
TGTATCTCTCTTGGCAAACA+TGG - chr7_4:63072984-63073003 Msa1169970:CDS 40.0%
! TTTACGCTCCAGATGTGTTT+TGG - chr7_4:63073362-63073381 Msa1169970:CDS 40.0%
!! TGTTTTGGACGTGAGCATAT+TGG - chr7_4:63073377-63073396 Msa1169970:CDS 40.0%
TTAACCTCAGAAGTTAGCTC+GGG + chr7_4:63073454-63073473 None:intergenic 40.0%
CTTAACCTCAGAAGTTAGCT+CGG + chr7_4:63073455-63073474 None:intergenic 40.0%
GCTCCAAGACCAAATTCTAA+CGG - chr7_4:63073478-63073497 Msa1169970:CDS 40.0%
!! TCCATTGATTTCTGTGGTTG+TGG + chr7_4:63073653-63073672 None:intergenic 40.0%
!! TTGGTCTCCATTGATTTCTG+TGG + chr7_4:63073659-63073678 None:intergenic 40.0%
TTGTCATGGTTAAGATGCTG+GGG + chr7_4:63073683-63073702 None:intergenic 40.0%
GTTGTCATGGTTAAGATGCT+GGG + chr7_4:63073684-63073703 None:intergenic 40.0%
AGTTGTCATGGTTAAGATGC+TGG + chr7_4:63073685-63073704 None:intergenic 40.0%
! CCTGATATGTTTCTGTAGGA+AGG + chr7_4:63073748-63073767 None:intergenic 40.0%
CCTTCCTACAGAAACATATC+AGG - chr7_4:63073745-63073764 Msa1169970:intron 40.0%
CAACATCAAAAGCGAAACTC+GGG - chr7_4:63074031-63074050 Msa1169970:intron 40.0%
AACGAAACCAATCAACGAAC+TGG + chr7_4:63074453-63074472 None:intergenic 40.0%
!! TTCGTTGATTGGTTTCGTTC+CGG - chr7_4:63074454-63074473 Msa1169970:intron 40.0%
CAACCAGACTATAGTATACC+CGG + chr7_4:63074476-63074495 None:intergenic 40.0%
CATCCAGTTCAACCATGATT+TGG - chr7_4:63074561-63074580 Msa1169970:intron 40.0%
CATCCAAATCATGGTTGAAC+TGG + chr7_4:63074567-63074586 None:intergenic 40.0%
AAATGAAGTGGCAGTATCAG+AGG - chr7_4:63074805-63074824 Msa1169970:CDS 40.0%
GAACTTTGCATTACAATGCC+TGG + chr7_4:63074845-63074864 None:intergenic 40.0%
GCCCAAAATATCGAGTACAT+AGG - chr7_4:63075044-63075063 Msa1169970:intron 40.0%
TGACACATTGAATGAAGACG+CGG - chr7_4:63075205-63075224 Msa1169970:intron 40.0%
! GCTTTGGATCCTCTTATAGA+TGG - chr7_4:63075593-63075612 Msa1169970:intron 40.0%
ATGTAGTACCTACAGAGACT+AGG - chr7_4:63075628-63075647 Msa1169970:intron 40.0%
! TTGATGACAACAGTTGGTCT+TGG - chr7_4:63075674-63075693 Msa1169970:intron 40.0%
!! CAACAGTTGGTCTTGGAATT+TGG - chr7_4:63075681-63075700 Msa1169970:intron 40.0%
!! TTGGTCTTGGAATTTGGTGT+TGG - chr7_4:63075687-63075706 Msa1169970:intron 40.0%
TGGGAGTTGAGAGAGTAAGA+GGG + chr7_4:63071537-63071556 None:intergenic 45.0%
TTGGGAGTTGAGAGAGTAAG+AGG + chr7_4:63071538-63071557 None:intergenic 45.0%
!! GCTTTTTCTTGGCTTTCTGC+AGG - chr7_4:63071742-63071761 Msa1169970:CDS 45.0%
GTGCATGTTTGATATCACGG+TGG - chr7_4:63071788-63071807 Msa1169970:CDS 45.0%
ATTGTAGTCCCCGCCAAAAA+GGG + chr7_4:63071930-63071949 None:intergenic 45.0%
TATTGTAGTCCCCGCCAAAA+AGG + chr7_4:63071931-63071950 None:intergenic 45.0%
GGCTCATCCTTTCATGTCTT+TGG - chr7_4:63072023-63072042 Msa1169970:intron 45.0%
TTGCCAAACCAGTTGCTTCA+AGG - chr7_4:63072431-63072450 Msa1169970:intron 45.0%
TCTTTCTCAGAGCTTCTAGC+AGG - chr7_4:63072475-63072494 Msa1169970:intron 45.0%
AGAAGATGCAATTGGAGGAG+TGG + chr7_4:63072512-63072531 None:intergenic 45.0%
AACGAATATCTCCCCTTCTC+AGG - chr7_4:63072582-63072601 Msa1169970:intron 45.0%
CTGAATGTTCACCTGAGAAG+GGG + chr7_4:63072596-63072615 None:intergenic 45.0%
CACTGAATGTTCACCTGAGA+AGG + chr7_4:63072598-63072617 None:intergenic 45.0%
CCGTTCAAGGTTCAATCAGT+TGG + chr7_4:63072664-63072683 None:intergenic 45.0%
CCTTGAACGGACCATTACTA+CGG - chr7_4:63072674-63072693 Msa1169970:intron 45.0%
!!! CTACGGTGTGGTTATTTTGG+CGG - chr7_4:63072691-63072710 Msa1169970:intron 45.0%
! TCGATTCGAGCGGTTTAAGA+CGG - chr7_4:63072732-63072751 Msa1169970:intron 45.0%
ACTTAGCAGCTCTTCTGACA+TGG - chr7_4:63072894-63072913 Msa1169970:intron 45.0%
TGGACCTCATGCAGATGTTT+AGG - chr7_4:63073330-63073349 Msa1169970:CDS 45.0%
CATGCCTAAACATCTGCATG+AGG + chr7_4:63073337-63073356 None:intergenic 45.0%
AGAAGTTAGCTCGGGAGTAA+GGG + chr7_4:63073446-63073465 None:intergenic 45.0%
GCCACAACCACAGAAATCAA+TGG - chr7_4:63073649-63073668 Msa1169970:CDS 45.0%
ATGGTTAAGATGCTGGGGAT+TGG + chr7_4:63073678-63073697 None:intergenic 45.0%
! GTGGCCTGATATGTTTCTGT+AGG + chr7_4:63073752-63073771 None:intergenic 45.0%
TGCCATCGTACAAGATTCTG+TGG + chr7_4:63073771-63073790 None:intergenic 45.0%
GCTGATAGACCTTCGTATGA+TGG - chr7_4:63073839-63073858 Msa1169970:intron 45.0%
GTGCACTTGTAGTAACTTCG+AGG + chr7_4:63073914-63073933 None:intergenic 45.0%
GAATGTGAGGAAGGAAGCAA+AGG - chr7_4:63074211-63074230 Msa1169970:intron 45.0%
GGAAGGAAGCAAAGGATTTG+AGG - chr7_4:63074219-63074238 Msa1169970:intron 45.0%
! AAGCAAAGGATTTGAGGCAG+AGG - chr7_4:63074225-63074244 Msa1169970:intron 45.0%
AAACCAATCAACGAACTGGC+TGG + chr7_4:63074449-63074468 None:intergenic 45.0%
!! TCGTTGATTGGTTTCGTTCC+GGG - chr7_4:63074455-63074474 Msa1169970:intron 45.0%
GTTCCGGGTATACTATAGTC+TGG - chr7_4:63074470-63074489 Msa1169970:intron 45.0%
!! TCTGTGGATTCTGAAGTCCT+TGG - chr7_4:63074863-63074882 Msa1169970:intron 45.0%
!! GATTCTGAAGTCCTTGGAGA+TGG - chr7_4:63074869-63074888 Msa1169970:intron 45.0%
GCTTTCGCTGGAGGAAATAT+GGG - chr7_4:63074891-63074910 Msa1169970:intron 45.0%
TGAAGGGAAATCCATATCCC+AGG - chr7_4:63074924-63074943 Msa1169970:intron 45.0%
TGTTCTTGAGTGGCATCTCA+TGG + chr7_4:63075461-63075480 None:intergenic 45.0%
!! AATGAATTAAAATTAAAAAT+CGG + chr7_4:63074612-63074631 None:intergenic 5.0%
TGACCCTTGTAATGCAGGAG+AGG - chr7_4:63071637-63071656 Msa1169970:three_prime_UTR 50.0%
AGGCCTTGAAGCAACTGGTT+TGG + chr7_4:63072437-63072456 None:intergenic 50.0%
CAAGTAGGCCTTGAAGCAAC+TGG + chr7_4:63072442-63072461 None:intergenic 50.0%
CACTGTCTTTGGCCTAATGG+CGG + chr7_4:63072548-63072567 None:intergenic 50.0%
CCTCACTGTCTTTGGCCTAA+TGG + chr7_4:63072551-63072570 None:intergenic 50.0%
CCATTAGGCCAAAGACAGTG+AGG - chr7_4:63072548-63072567 Msa1169970:intron 50.0%
GGCTTGAACCTCACTGTCTT+TGG + chr7_4:63072559-63072578 None:intergenic 50.0%
GAAGGGGAGATATTCGTTGC+TGG + chr7_4:63072580-63072599 None:intergenic 50.0%
CCGTAGTAATGGTCCGTTCA+AGG + chr7_4:63072677-63072696 None:intergenic 50.0%
AACGGACCATTACTACGGTG+TGG - chr7_4:63072679-63072698 Msa1169970:intron 50.0%
ACGGTTGAATCATGACCCAG+AGG - chr7_4:63072751-63072770 Msa1169970:intron 50.0%
GCTCACGTCCAAAACACATC+TGG + chr7_4:63073373-63073392 None:intergenic 50.0%
CAGAAGTTAGCTCGGGAGTA+AGG + chr7_4:63073447-63073466 None:intergenic 50.0%
TACTCCCGAGCTAACTTCTG+AGG - chr7_4:63073447-63073466 Msa1169970:CDS 50.0%
GGCCACAGAATCTTGTACGA+TGG - chr7_4:63073766-63073785 Msa1169970:intron 50.0%
TACGATGGCACCACAGAACA+TGG - chr7_4:63073781-63073800 Msa1169970:intron 50.0%
TGGTCTAAGTGGGGAATGTG+AGG - chr7_4:63074198-63074217 Msa1169970:intron 50.0%
CTAAGTGGGGAATGTGAGGA+AGG - chr7_4:63074202-63074221 Msa1169970:intron 50.0%
CACGGTTGAAGCTGTCTTCT+TGG + chr7_4:63074424-63074443 None:intergenic 50.0%
! TCAACGAACTGGCTGGTTCA+CGG + chr7_4:63074442-63074461 None:intergenic 50.0%
GAACCAGCCAGTTCGTTGAT+TGG - chr7_4:63074443-63074462 Msa1169970:intron 50.0%
GAAGTGGCAGTATCAGAGGA+AGG - chr7_4:63074809-63074828 Msa1169970:CDS 50.0%
GAGGAAGGTTTAGTAGAGCC+AGG - chr7_4:63074824-63074843 Msa1169970:intron 50.0%
GGCTTTCGCTGGAGGAAATA+TGG - chr7_4:63074890-63074909 Msa1169970:intron 50.0%
CTGGAGGAAATATGGGCAGA+AGG - chr7_4:63074898-63074917 Msa1169970:intron 50.0%
GAGGAAATATGGGCAGAAGG+TGG - chr7_4:63074901-63074920 Msa1169970:intron 50.0%
ATATGGGCAGAAGGTGGTGA+AGG - chr7_4:63074907-63074926 Msa1169970:intron 50.0%
TATGGGCAGAAGGTGGTGAA+GGG - chr7_4:63074908-63074927 Msa1169970:intron 50.0%
ATCGAACCAGCGTGACCTCT+GGG + chr7_4:63072769-63072788 None:intergenic 55.0%
!! CGCTGGTTCGATGTCCGATT+TGG - chr7_4:63072777-63072796 Msa1169970:intron 55.0%
GATGGCACCACAGAACATGG+AGG - chr7_4:63073784-63073803 Msa1169970:intron 55.0%
TGGTCCTCCTCCATGTTCTG+TGG + chr7_4:63073794-63073813 None:intergenic 55.0%
CGAAACTCGGGAGCAACATC+AGG - chr7_4:63074043-63074062 Msa1169970:intron 55.0%
TCCTTGGAGATGGCTTTCGC+TGG - chr7_4:63074879-63074898 Msa1169970:intron 55.0%
TCCAGCGAAAGCCATCTCCA+AGG + chr7_4:63074883-63074902 None:intergenic 55.0%
TTGGAGATGGCTTTCGCTGG+AGG - chr7_4:63074882-63074901 Msa1169970:intron 55.0%
CTGCAATGTTCGCAAGCACG+TGG - chr7_4:63075380-63075399 Msa1169970:intron 55.0%
TCATGACCCAGAGGTCACGC+TGG - chr7_4:63072760-63072779 Msa1169970:intron 60.0%
CATCGAACCAGCGTGACCTC+TGG + chr7_4:63072770-63072789 None:intergenic 60.0%
GGCACCACAGAACATGGAGG+AGG - chr7_4:63073787-63073806 Msa1169970:intron 60.0%
TGAAGACGCGGCGCTTGATG+TGG - chr7_4:63075217-63075236 Msa1169970:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 63071452 63075780 63071452 ID=Msa1169970;Name=Msa1169970
chr7_4 mRNA 63071452 63075780 63071452 ID=Msa1169970-mRNA-1;Parent=Msa1169970;Name=Msa1169970-mRNA-1;_AED=0.04;_eAED=0.04;_QI=184|0.5|0.57|1|0.66|0.71|7|253|449
chr7_4 exon 63071452 63071879 63071452 ID=Msa1169970-mRNA-1:exon:20090;Parent=Msa1169970-mRNA-1
chr7_4 exon 63072287 63072445 63072287 ID=Msa1169970-mRNA-1:exon:20089;Parent=Msa1169970-mRNA-1
chr7_4 exon 63072960 63073675 63072960 ID=Msa1169970-mRNA-1:exon:20088;Parent=Msa1169970-mRNA-1
chr7_4 exon 63074227 63074358 63074227 ID=Msa1169970-mRNA-1:exon:20087;Parent=Msa1169970-mRNA-1
chr7_4 exon 63074668 63074838 63074668 ID=Msa1169970-mRNA-1:exon:20086;Parent=Msa1169970-mRNA-1
chr7_4 exon 63075469 63075578 63075469 ID=Msa1169970-mRNA-1:exon:20085;Parent=Msa1169970-mRNA-1
chr7_4 exon 63075710 63075780 63075710 ID=Msa1169970-mRNA-1:exon:20084;Parent=Msa1169970-mRNA-1
chr7_4 five_prime_UTR 63075710 63075780 63075710 ID=Msa1169970-mRNA-1:five_prime_utr;Parent=Msa1169970-mRNA-1
chr7_4 five_prime_UTR 63075469 63075578 63075469 ID=Msa1169970-mRNA-1:five_prime_utr;Parent=Msa1169970-mRNA-1
chr7_4 five_prime_UTR 63074836 63074838 63074836 ID=Msa1169970-mRNA-1:five_prime_utr;Parent=Msa1169970-mRNA-1
chr7_4 CDS 63074668 63074835 63074668 ID=Msa1169970-mRNA-1:cds;Parent=Msa1169970-mRNA-1
chr7_4 CDS 63074227 63074358 63074227 ID=Msa1169970-mRNA-1:cds;Parent=Msa1169970-mRNA-1
chr7_4 CDS 63072960 63073675 63072960 ID=Msa1169970-mRNA-1:cds;Parent=Msa1169970-mRNA-1
chr7_4 CDS 63072287 63072445 63072287 ID=Msa1169970-mRNA-1:cds;Parent=Msa1169970-mRNA-1
chr7_4 CDS 63071705 63071879 63071705 ID=Msa1169970-mRNA-1:cds;Parent=Msa1169970-mRNA-1
chr7_4 three_prime_UTR 63071452 63071704 63071452 ID=Msa1169970-mRNA-1:three_prime_utr;Parent=Msa1169970-mRNA-1
Gene Sequence

>Msa1169970

ATGATGGATATTGAAGAAGCAGAAAGAGTAGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGTTCTTCATACAAATCTTTCTCAGAGCTTCTAGCAGGCGCAATCAATTCCACTCCTCCAATTGCATCTTCTCAAACTACAATATCCGCCATTAGGCCAAAGACAGCTAATATTTTTGGAGGTGCACTTAGCAGCTCTTCTGACATGGATCCCAAACCTGATACCAATCAATCTCTCATTTACAAACCAATGGCAAAATTTGTGTCACAGACAACTGTATCTCTCTTGGCAAACATGACTTTATCTCTTTTCAATTTGAGACTTGGATTTTTCTTGATACTTACCTCTTTTTATCTTCTTTTGGAGAAGGGAATTTGCAGTACTAATCAGCCACAACCACAGAAATCAATGGAGACCAATCCCCAGCATCTTAACCATGACAACTTTAGAGCTAACACGAGCTCGAAATTACATCAGAACATTACCCTTCCTACAGAAACATATCAGGCCACAGAATCTTGTACGATGGCACCACAGAACATGGAGGAGGACCAAAAAGCATTACCATCCACAAATAATGCTGATAGACCTTCGTATGATGGATATAACTGGAGAAAATATGGACAGAAGCAAGTAAAAGGAAGCGAGTATCCTCGAAGTTACTACAAGTGCACATATCCTAATTGTCCAGTTAAAAAGAAAGTTGAAAGATCATTAGATGGTGAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATGGAAAGCAACAACATCAAAAGCGAAACTCGGGAGCAACATCAGGAATGATTTCTGATGGAATGGTTCAAGATAAAGTATGGAGTAATAATAGTAATCAGAATGAAAGGAATGAAGGAAGAATAGATAATCAAGTCAAAGCTTCACAGCCTAATGATTTTGCTCTAGAAAATTCTTGTGGTCTAAGTGGGGAATGTGAGGAAGGAAGCAAAGGATTTGAGGCAGAGGAAGATGACCCTAGAAGTAAAAGAAGGAAAAATGAGAATCAATCAAATGAAGTGGCAGTATCAGAGGAAGGTTTAGTAGAGCCAGGCATTGTAATGCAAAGTTCTGTGGATTCTGAAGTCCTTGGAGATGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGAAATCCATATCCCAGAAGTTACTATAGATGTACTAGTGTCAACTGCAATGTTCGCAAGCACGTGGAGAGATCAATAGATGATCCAAAATCATTTGTGACTACATATGAAGGAAAACACAACCATGAGATGCCACTCAAGAACACAACAACAATGACCTCTGAAAAAGATTCAATGACTTCTCTTAAGTAA

Protein sequence

>Msa1169970

MMDIEEAERVVVAKPVASRPTCSSYKSFSELLAGAINSTPPIASSQTTISAIRPKTANIFGGALSSSSDMDPKPDTNQSLIYKPMAKFVSQTTVSLLANMTLSLFNLRLGFFLILTSFYLLLEKGICSTNQPQPQKSMETNPQHLNHDNFRANTSSKLHQNITLPTETYQATESCTMAPQNMEEDQKALPSTNNADRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSLDGEIAEIVYKGEHNHGKQQHQKRNSGATSGMISDGMVQDKVWSNNSNQNERNEGRIDNQVKASQPNDFALENSCGLSGECEEGSKGFEAEEDDPRSKRRKNENQSNEVAVSEEGLVEPGIVMQSSVDSEVLGDGFRWRKYGQKVVKGNPYPRSYYRCTSVNCNVRKHVERSIDDPKSFVTTYEGKHNHEMPLKNTTTMTSEKDSMTSLK*