Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734230 | XP_003615635.1 | 86.207 | 435 | 4 | 3 | 1 | 379 | 1 | 435 | 0.0 | 669 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734230 | sp|Q93Z81|CAX3_ARATH | 58.852 | 418 | 106 | 5 | 25 | 378 | 32 | 447 | 8.73e-149 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734230 | G7KE49 | 86.207 | 435 | 4 | 3 | 1 | 379 | 1 | 435 | 0.0 | 669 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095540 | Msa0734230 | 0.801566 | 8.475793e-49 | -8.615850e-47 |
| Msa0611380 | Msa0734230 | 0.839651 | 1.395036e-57 | -8.615850e-47 |
| Msa0618180 | Msa0734230 | 0.808172 | 3.529834e-50 | -8.615850e-47 |
| Msa0619990 | Msa0734230 | 0.805318 | 1.414169e-49 | -8.615850e-47 |
| Msa0628640 | Msa0734230 | 0.878615 | 2.433298e-69 | -8.615850e-47 |
| Msa0631120 | Msa0734230 | 0.846219 | 2.492495e-59 | -8.615850e-47 |
| Msa0666030 | Msa0734230 | 0.819988 | 8.694733e-53 | -8.615850e-47 |
| Msa0669340 | Msa0734230 | 0.857279 | 1.818428e-62 | -8.615850e-47 |
| Msa0701970 | Msa0734230 | 0.813390 | 2.622963e-51 | -8.615850e-47 |
| Msa0716450 | Msa0734230 | 0.840577 | 7.995152e-58 | -8.615850e-47 |
| Msa0717260 | Msa0734230 | 0.861764 | 8.158173e-64 | -8.615850e-47 |
| Msa0734230 | Msa0758320 | 0.855125 | 7.779273e-62 | -8.615850e-47 |
| Msa0734230 | Msa0766100 | -0.808477 | 3.038286e-50 | -8.615850e-47 |
| Msa0734230 | Msa0775440 | 0.909726 | 4.138351e-82 | -8.615850e-47 |
| Msa0734230 | Msa0799030 | 0.860049 | 2.708259e-63 | -8.615850e-47 |
| Msa0734230 | Msa0799700 | 0.847978 | 8.213591e-60 | -8.615850e-47 |
| Msa0734230 | Msa0810020 | 0.812980 | 3.226729e-51 | -8.615850e-47 |
| Msa0734230 | Msa0812820 | 0.887476 | 1.379807e-72 | -8.615850e-47 |
| Msa0734230 | Msa0822990 | 0.817941 | 2.539323e-52 | -8.615850e-47 |
| Msa0734230 | Msa0837440 | 0.850795 | 1.347337e-60 | -8.615850e-47 |
| Msa0734230 | Msa0837980 | 0.857764 | 1.307164e-62 | -8.615850e-47 |
| Msa0734230 | Msa0853320 | 0.887503 | 1.347586e-72 | -8.615850e-47 |
| Msa0734230 | Msa0862100 | 0.812376 | 4.372720e-51 | -8.615850e-47 |
| Msa0734230 | Msa0951710 | 0.835854 | 1.317011e-56 | -8.615850e-47 |
| Msa0734230 | Msa0981010 | 0.808206 | 3.470561e-50 | -8.615850e-47 |
| Msa0734230 | Msa0988480 | 0.814828 | 1.262721e-51 | -8.615850e-47 |
| Msa0734230 | Msa1002620 | 0.836830 | 7.436907e-57 | -8.615850e-47 |
| Msa0734230 | Msa1033560 | 0.841366 | 4.963854e-58 | -8.615850e-47 |
| Msa0734230 | Msa1095470 | 0.812026 | 5.215818e-51 | -8.615850e-47 |
| Msa0734230 | Msa1113850 | 0.831300 | 1.805228e-55 | -8.615850e-47 |
| Msa0734230 | Msa1160400 | 0.836185 | 1.085303e-56 | -8.615850e-47 |
| Msa0734230 | Msa1190120 | 0.823388 | 1.422867e-53 | -8.615850e-47 |
| Msa0734230 | Msa1203000 | 0.834210 | 3.418820e-56 | -8.615850e-47 |
| Msa0734230 | Msa1211550 | 0.853162 | 2.867114e-61 | -8.615850e-47 |
| Msa0734230 | Msa1217940 | 0.802063 | 6.699920e-49 | -8.615850e-47 |
| Msa0734230 | Msa1219260 | 0.835193 | 1.934557e-56 | -8.615850e-47 |
| Msa0734230 | Msa1227950 | 0.825675 | 4.118423e-54 | -8.615850e-47 |
| Msa0734230 | Msa1227970 | 0.823386 | 1.424372e-53 | -8.615850e-47 |
| Msa0734230 | Msa1255280 | 0.839200 | 1.827128e-57 | -8.615850e-47 |
| Msa0734230 | Msa1258050 | 0.822318 | 2.526016e-53 | -8.615850e-47 |
| Msa0734230 | Msa1266960 | 0.830452 | 2.914241e-55 | -8.615850e-47 |
| Msa0734230 | Msa1321000 | 0.810643 | 1.040980e-50 | -8.615850e-47 |
| Msa0734230 | Msa1339940 | 0.857318 | 1.770631e-62 | -8.615850e-47 |
| Msa0734230 | Msa1369700 | 0.838504 | 2.764435e-57 | -8.615850e-47 |
| Msa0734230 | Msa1395870 | 0.824199 | 9.185514e-54 | -8.615850e-47 |
| Msa0734230 | Msa1399560 | 0.831581 | 1.539447e-55 | -8.615850e-47 |
| Msa0734230 | Msa1437190 | 0.808377 | 3.192008e-50 | -8.615850e-47 |
| Msa0734230 | Msa1443840 | 0.824057 | 9.917902e-54 | -8.615850e-47 |
| Msa0734230 | Msa1449730 | 0.802696 | 4.962804e-49 | -8.615850e-47 |
| Msa0734230 | Msa1452060 | 0.860053 | 2.700224e-63 | -8.615850e-47 |
| Msa0734230 | Msa1460380 | 0.835463 | 1.653539e-56 | -8.615850e-47 |
| Msa0141100 | Msa0734230 | 0.824031 | 1.005773e-53 | -8.615850e-47 |
| Msa0183750 | Msa0734230 | 0.824870 | 6.385767e-54 | -8.615850e-47 |
| Msa0191040 | Msa0734230 | 0.826487 | 2.641433e-54 | -8.615850e-47 |
| Msa0233340 | Msa0734230 | 0.826673 | 2.384581e-54 | -8.615850e-47 |
| Msa0374850 | Msa0734230 | 0.830135 | 3.482707e-55 | -8.615850e-47 |
| Msa0375090 | Msa0734230 | 0.827344 | 1.647433e-54 | -8.615850e-47 |
| Msa0385670 | Msa0734230 | 0.805990 | 1.021980e-49 | -8.615850e-47 |
| Msa0470340 | Msa0734230 | 0.824660 | 7.157786e-54 | -8.615850e-47 |
| Msa0470860 | Msa0734230 | 0.817787 | 2.750456e-52 | -8.615850e-47 |
| Msa0480950 | Msa0734230 | 0.819331 | 1.228450e-52 | -8.615850e-47 |
| Msa0301180 | Msa0734230 | 0.802958 | 4.382137e-49 | -8.615850e-47 |
| Msa0311690 | Msa0734230 | 0.830737 | 2.480586e-55 | -8.615850e-47 |
| Msa0315250 | Msa0734230 | 0.803463 | 3.445000e-49 | -8.615850e-47 |
| Msa0524120 | Msa0734230 | 0.801689 | 7.997112e-49 | -8.615850e-47 |
| Msa0531430 | Msa0734230 | 0.845570 | 3.740825e-59 | -8.615850e-47 |
| Msa0534570 | Msa0734230 | 0.817661 | 2.937718e-52 | -8.615850e-47 |
| Msa0534590 | Msa0734230 | 0.830999 | 2.140142e-55 | -8.615850e-47 |
| Msa0565600 | Msa0734230 | 0.830928 | 2.227186e-55 | -8.615850e-47 |
| Msa0590800 | Msa0734230 | 0.834698 | 2.579091e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734230 | MtrunA17_Chr5g0429881 | 86.207 | 435 | 4 | 3 | 1 | 379 | 1 | 435 | 0.0 | 669 |
| Msa0734230 | MtrunA17_Chr7g0242351 | 60.891 | 404 | 96 | 5 | 25 | 369 | 34 | 434 | 8.62e-143 | 413 |
| Msa0734230 | MtrunA17_Chr4g0006841 | 63.722 | 317 | 64 | 4 | 107 | 377 | 2 | 313 | 1.81e-120 | 352 |
| Msa0734230 | MtrunA17_Chr2g0334171 | 41.320 | 409 | 167 | 6 | 27 | 370 | 38 | 438 | 1.48e-90 | 279 |
| Msa0734230 | MtrunA17_Chr3g0120501 | 39.614 | 414 | 179 | 8 | 18 | 364 | 15 | 424 | 2.34e-82 | 258 |
| Msa0734230 | MtrunA17_Chr4g0006831 | 57.317 | 82 | 33 | 2 | 25 | 106 | 34 | 113 | 1.63e-24 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0734230 | AT3G51860.1 | 58.852 | 418 | 106 | 5 | 25 | 378 | 32 | 447 | 8.88e-150 | 431 |
| Msa0734230 | AT2G38170.3 | 57.457 | 409 | 108 | 6 | 25 | 370 | 32 | 437 | 1.34e-146 | 424 |
| Msa0734230 | AT2G38170.1 | 57.457 | 409 | 108 | 6 | 25 | 370 | 32 | 437 | 1.96e-146 | 423 |
| Msa0734230 | AT5G01490.2 | 50.245 | 408 | 135 | 6 | 28 | 369 | 35 | 440 | 6.94e-137 | 398 |
| Msa0734230 | AT5G01490.1 | 50.245 | 408 | 135 | 6 | 28 | 369 | 35 | 440 | 6.94e-137 | 398 |
| Msa0734230 | AT3G51860.2 | 58.947 | 380 | 90 | 5 | 25 | 340 | 32 | 409 | 1.33e-128 | 378 |
| Msa0734230 | AT1G55730.1 | 45.144 | 381 | 139 | 4 | 55 | 370 | 62 | 437 | 8.77e-97 | 295 |
| Msa0734230 | AT1G55730.2 | 45.144 | 381 | 139 | 4 | 55 | 370 | 62 | 437 | 8.77e-97 | 295 |
| Msa0734230 | AT2G38170.2 | 53.106 | 322 | 85 | 6 | 25 | 283 | 32 | 350 | 9.32e-95 | 288 |
| Msa0734230 | AT3G13320.1 | 43.570 | 381 | 145 | 4 | 55 | 370 | 62 | 437 | 2.19e-93 | 286 |
| Msa0734230 | AT1G55720.2 | 43.117 | 385 | 150 | 6 | 50 | 370 | 67 | 446 | 3.05e-89 | 276 |
| Msa0734230 | AT1G55720.1 | 43.117 | 385 | 150 | 6 | 50 | 370 | 67 | 446 | 9.46e-89 | 276 |
Find 78 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCACATTTCTTAGTATT+TGG | 0.108992 | 5_1:-47920765 | None:intergenic |
| TATAAACTTGTACATGAAAT+TGG | 0.153750 | 5_1:-47927851 | None:intergenic |
| TGGTCAAGTTCTTGGAAATT+TGG | 0.211542 | 5_1:+47927738 | Msa0734230:three_prime_UTR |
| CGAAGATGGATTTCTATAAA+TGG | 0.218449 | 5_1:+47927617 | Msa0734230:three_prime_UTR |
| CATGCAACAATCACACTTAA+TGG | 0.225296 | 5_1:-47925770 | None:intergenic |
| TGTTACAGCCTTTACTTTAC+AGG | 0.231614 | 5_1:+47925862 | Msa0734230:CDS |
| TTTAATTTCTCTCTTGGGTT+GGG | 0.246076 | 5_1:-47920547 | None:intergenic |
| AAAGCGTATTTGAACATTAA+TGG | 0.249587 | 5_1:-47924519 | None:intergenic |
| TTTACTGTTGCAGATCATTA+TGG | 0.259267 | 5_1:+47927491 | Msa0734230:intron |
| TCAAACCTTCTCTTGGTTCT+AGG | 0.273673 | 5_1:+47923899 | Msa0734230:CDS |
| CATATCTTTGCTCCCTCTTA+AGG | 0.282560 | 5_1:-47923952 | None:intergenic |
| GACTTCAATCTGCTTGAAAC+TGG | 0.291793 | 5_1:+47925818 | Msa0734230:CDS |
| ACTAGGCTGCTTCAGATTCT+TGG | 0.297535 | 5_1:+47925367 | Msa0734230:intron |
| GTTCTCCAAATCTTCATTCA+TGG | 0.298533 | 5_1:-47920653 | None:intergenic |
| TAGAAATCCATCTTCGAATC+TGG | 0.320089 | 5_1:-47927610 | None:intergenic |
| AATGGGTATAAGAATGGATT+TGG | 0.331250 | 5_1:+47925796 | Msa0734230:CDS |
| TCGAACCATGAATGAAGATT+TGG | 0.334079 | 5_1:+47920648 | Msa0734230:CDS |
| CATTCTCTCAAACCTTCTCT+TGG | 0.346415 | 5_1:+47923892 | Msa0734230:CDS |
| CTAGGCTGCTTCAGATTCTT+GGG | 0.347536 | 5_1:+47925368 | Msa0734230:intron |
| ATCAACACTAGCTAAAACTT+TGG | 0.353727 | 5_1:-47920574 | None:intergenic |
| TACTCAAATTTCTATGTTTG+TGG | 0.354118 | 5_1:+47925648 | Msa0734230:CDS |
| AAAGAAATCAGATATGGTTT+TGG | 0.357259 | 5_1:+47920723 | Msa0734230:CDS |
| TGTGATTGTTGCATGGATAA+TGG | 0.362308 | 5_1:+47925778 | Msa0734230:CDS |
| CAAGAGAAGGTTTGAGAGAA+TGG | 0.377825 | 5_1:-47923891 | None:intergenic |
| TGACAATTGAAGAGTACTAT+TGG | 0.380652 | 5_1:-47924565 | None:intergenic |
| ATAATGCAGGACATATCTTT+AGG | 0.381827 | 5_1:+47925607 | Msa0734230:intron |
| GTTGTCAAGTTCTCCTTGCT+TGG | 0.384448 | 5_1:+47923866 | Msa0734230:CDS |
| CTGCTTGAAACTGGATGTCT+TGG | 0.387346 | 5_1:+47925827 | Msa0734230:CDS |
| TGTGAGAAAGAAATCAGATA+TGG | 0.399485 | 5_1:+47920717 | Msa0734230:CDS |
| CTAGGCAGCTCACTCCTTTG+TGG | 0.409952 | 5_1:+47923917 | Msa0734230:CDS |
| ATGTTCAAATACGCTTTGGC+TGG | 0.415484 | 5_1:+47924525 | Msa0734230:CDS |
| TAGATATACTTACTGATTTG+TGG | 0.418490 | 5_1:-47926067 | None:intergenic |
| TTAATTTCTCTCTTGGGTTG+GGG | 0.422008 | 5_1:-47920546 | None:intergenic |
| ATTAATGTTCAAATACGCTT+TGG | 0.427152 | 5_1:+47924521 | Msa0734230:CDS |
| ATAAACTTGTACATGAAATT+GGG | 0.433615 | 5_1:-47927850 | None:intergenic |
| TCTTCATTCATGGTTCGAAA+TGG | 0.450144 | 5_1:-47920643 | None:intergenic |
| GTGATTGTTGCATGGATAAT+GGG | 0.451478 | 5_1:+47925779 | Msa0734230:CDS |
| GTGGCTTAGCAAACCTTAAG+AGG | 0.457666 | 5_1:+47923939 | Msa0734230:CDS |
| CATATCTTTAGGTGTTGCTA+TGG | 0.459702 | 5_1:+47925618 | Msa0734230:CDS |
| TCTGCAGCATTCCCAACAAT+TGG | 0.469344 | 5_1:-47925426 | None:intergenic |
| ATTTGCTTACAAGAACAAAC+TGG | 0.472635 | 5_1:+47925467 | Msa0734230:CDS |
| TGAACATTAATGGCAGCAAA+TGG | 0.479920 | 5_1:-47924509 | None:intergenic |
| AAATCAGCAGCAACAGCTAA+AGG | 0.486221 | 5_1:-47920844 | None:intergenic |
| TTCAAATACGCTTTGGCTGG+GGG | 0.492117 | 5_1:+47924528 | Msa0734230:CDS |
| GTTCAAATACGCTTTGGCTG+GGG | 0.504789 | 5_1:+47924527 | Msa0734230:CDS |
| TGTTCAAATACGCTTTGGCT+GGG | 0.508594 | 5_1:+47924526 | Msa0734230:CDS |
| CGTCACTCCAGATTCGAAGA+TGG | 0.510121 | 5_1:+47927603 | Msa0734230:three_prime_UTR |
| AAATATGAAAGAGGTGATGT+TGG | 0.510177 | 5_1:+47920789 | Msa0734230:CDS |
| GGAAGCTGACACGTTCAGCT+AGG | 0.511657 | 5_1:-47922898 | None:intergenic |
| GACGAATTTCAATCATCCGC+AGG | 0.512841 | 5_1:-47927584 | None:intergenic |
| GGGAATGCTGCAGAACATGC+TGG | 0.514082 | 5_1:+47925435 | Msa0734230:CDS |
| GTGTGAATGTTTCAGTTGGA+GGG | 0.516787 | 5_1:+47923768 | Msa0734230:intron |
| ATGGATAATGGGTATAAGAA+TGG | 0.519584 | 5_1:+47925790 | Msa0734230:CDS |
| AATATGAAAGAGGTGATGTT+GGG | 0.521274 | 5_1:+47920790 | Msa0734230:CDS |
| CATTAAGTGTGATTGTTGCA+TGG | 0.528687 | 5_1:+47925771 | Msa0734230:CDS |
| GAAGCTGACACGTTCAGCTA+GGG | 0.534246 | 5_1:-47922897 | None:intergenic |
| GGAACTTCACACTATTTGAA+AGG | 0.534618 | 5_1:+47925986 | Msa0734230:CDS |
| ATGAATTAATTCCATGAATG+TGG | 0.538219 | 5_1:-47927822 | None:intergenic |
| TAATTACACTTACCCTTCCA+AGG | 0.541293 | 5_1:-47920873 | None:intergenic |
| GCAACAGCTAAAGGAACAGC+CGG | 0.546306 | 5_1:-47920835 | None:intergenic |
| ATATCTTTAGGTGTTGCTAT+GGG | 0.547481 | 5_1:+47925619 | Msa0734230:CDS |
| GGCAGCTCACTCCTTTGTGG+TGG | 0.549103 | 5_1:+47923920 | Msa0734230:CDS |
| TCTCACAGCTTCAGTTTCGA+AGG | 0.549530 | 5_1:-47927652 | None:intergenic |
| TGTGATGACAAATATGAAAG+AGG | 0.559424 | 5_1:+47920780 | Msa0734230:CDS |
| TGTGCAGACCTGTAAAGTAA+AGG | 0.579580 | 5_1:-47925870 | None:intergenic |
| TAATATTGCTATGATCATCT+CGG | 0.588080 | 5_1:-47923819 | None:intergenic |
| GAATTTGATGAAATGTTATG+TGG | 0.590212 | 5_1:-47920691 | None:intergenic |
| TGAGAGAATGGAACCAAGCA+AGG | 0.600148 | 5_1:-47923879 | None:intergenic |
| ACGACGATAGCTTCAAAGCA+TGG | 0.608256 | 5_1:-47927519 | None:intergenic |
| CTAGGGGAGCAAGTCCAAGT+AGG | 0.616205 | 5_1:-47922880 | None:intergenic |
| ACGAATTTCAATCATCCGCA+GGG | 0.621934 | 5_1:-47927583 | None:intergenic |
| AAGCTGACACGTTCAGCTAG+GGG | 0.628561 | 5_1:-47922896 | None:intergenic |
| TAGGCTGCTTCAGATTCTTG+GGG | 0.629621 | 5_1:+47925369 | Msa0734230:intron |
| AGCTGCCTAGAACCAAGAGA+AGG | 0.634661 | 5_1:-47923904 | None:intergenic |
| TGGCTTAGCAAACCTTAAGA+GGG | 0.662643 | 5_1:+47923940 | Msa0734230:CDS |
| GGGCTTCTAAATGCAACTTG+TGG | 0.683635 | 5_1:+47923788 | Msa0734230:CDS |
| GGTTTGCTAAGCCACCACAA+AGG | 0.707409 | 5_1:-47923931 | None:intergenic |
| TGAATGACTTTGTTTCCCCG+TGG | 0.726889 | 5_1:+47927543 | Msa0734230:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+TGG | - | chr5_1:47926506-47926525 | None:intergenic | 0.0% |
| !!! | TAAGAATTTTTTTCTTTTTT+TGG | + | chr5_1:47921770-47921789 | Msa0734230:intron | 10.0% |
| !! | ACTAGATTTAATAAAAATAA+AGG | - | chr5_1:47924090-47924109 | None:intergenic | 10.0% |
| !!! | TATATATTAATCTCTAATTT+TGG | + | chr5_1:47926521-47926540 | Msa0734230:intron | 10.0% |
| !!! | ATATATTAATCTCTAATTTT+GGG | + | chr5_1:47926522-47926541 | Msa0734230:intron | 10.0% |
| !!! | ATTTTCTTTCAAAAAATTAT+AGG | + | chr5_1:47927214-47927233 | Msa0734230:intron | 10.0% |
| !!! | TTTTCTTTCAAAAAATTATA+GGG | + | chr5_1:47927215-47927234 | Msa0734230:intron | 10.0% |
| !! | AAGTCATAATATGAATTAAT+GGG | - | chr5_1:47920902-47920921 | None:intergenic | 15.0% |
| !! | TTATAGATAATTTATCCATT+TGG | - | chr5_1:47921269-47921288 | None:intergenic | 15.0% |
| !!! | AACTGATGAAATTTAAAATA+TGG | + | chr5_1:47921467-47921486 | Msa0734230:intron | 15.0% |
| !!! | ACTGATGAAATTTAAAATAT+GGG | + | chr5_1:47921468-47921487 | Msa0734230:intron | 15.0% |
| !! | AATAATATACTAAAAACCTT+AGG | + | chr5_1:47921939-47921958 | Msa0734230:intron | 15.0% |
| !!! | ACAATTTTTAATTAATCCTA+AGG | - | chr5_1:47921958-47921977 | None:intergenic | 15.0% |
| !! | TTAGGATTAATTAAAAATTG+TGG | + | chr5_1:47921957-47921976 | Msa0734230:intron | 15.0% |
| !! | ATGTATATATTGTAAAACTA+TGG | - | chr5_1:47922033-47922052 | None:intergenic | 15.0% |
| !! | CTATTAAAAATGAAAACTTT+GGG | + | chr5_1:47922372-47922391 | Msa0734230:intron | 15.0% |
| !! | TGAAATATATGTTTATAAGT+GGG | - | chr5_1:47922477-47922496 | None:intergenic | 15.0% |
| !! | ATGAAATATATGTTTATAAG+TGG | - | chr5_1:47922478-47922497 | None:intergenic | 15.0% |
| !! | CTATTAAAAATGAAAACTTT+GGG | + | chr5_1:47922372-47922391 | Msa0734230:intron | 15.0% |
| !! | TAAATATATGTTTATAAGTG+GGG | - | chr5_1:47922723-47922742 | None:intergenic | 15.0% |
| !! | CTAAATATATGTTTATAAGT+GGG | - | chr5_1:47922724-47922743 | None:intergenic | 15.0% |
| !! | AAAAAATTATAAGCGATTAA+GGG | - | chr5_1:47923630-47923649 | None:intergenic | 15.0% |
| !! | AAAAAAATTATAAGCGATTA+AGG | - | chr5_1:47923631-47923650 | None:intergenic | 15.0% |
| !!! | TTTTTTTAATTTGTGTGAAA+TGG | + | chr5_1:47924325-47924344 | Msa0734230:intron | 15.0% |
| !!! | GTTATTTATTTTGCATAAAA+TGG | - | chr5_1:47925349-47925368 | None:intergenic | 15.0% |
| !! | TTTATGCAAAATAAATAACT+AGG | + | chr5_1:47925350-47925369 | Msa0734230:intron | 15.0% |
| !! | AAATAAAATAAAAGAGAAAG+TGG | - | chr5_1:47925911-47925930 | None:intergenic | 15.0% |
| !!! | TATTTGTACTATTTTTCATA+TGG | - | chr5_1:47926166-47926185 | None:intergenic | 15.0% |
| !!! | GTTGTAATTATTTTATTAAC+CGG | + | chr5_1:47926437-47926456 | Msa0734230:intron | 15.0% |
| !!! | AAAACAAATACTTTTTTCTT+TGG | - | chr5_1:47926868-47926887 | None:intergenic | 15.0% |
| !!! | AAAAAAGTATTTGTTTTTCT+TGG | + | chr5_1:47926871-47926890 | Msa0734230:intron | 15.0% |
| !!! | TTTCATTTCTAAGTTTTTTT+TGG | + | chr5_1:47927113-47927132 | Msa0734230:intron | 15.0% |
| !!! | TTCATTTCTAAGTTTTTTTT+GGG | + | chr5_1:47927114-47927133 | Msa0734230:intron | 15.0% |
| !!! | GATTTTTTAATTTCTCTCTT+GGG | - | chr5_1:47920555-47920574 | None:intergenic | 20.0% |
| !! | GAAGTCATAATATGAATTAA+TGG | - | chr5_1:47920903-47920922 | None:intergenic | 20.0% |
| !!! | TTTGTTAGTTTTTTAAACTG+AGG | + | chr5_1:47920953-47920972 | Msa0734230:intron | 20.0% |
| !! | ACTTATTAGATTAAAAGTCA+TGG | - | chr5_1:47921048-47921067 | None:intergenic | 20.0% |
| !!! | TCTTTTAGTTCATAAATATG+TGG | + | chr5_1:47921432-47921451 | Msa0734230:intron | 20.0% |
| !!! | TTTAAATTTCATCAGTTTTG+TGG | - | chr5_1:47921464-47921483 | None:intergenic | 20.0% |
| !!! | AATGCTGATAAAGATTTTTT+AGG | - | chr5_1:47921739-47921758 | None:intergenic | 20.0% |
| !! | AGTATTTATATCTAACTAAG+TGG | - | chr5_1:47922282-47922301 | None:intergenic | 20.0% |
| !!! | CCAAAGTTTTCATTTTTAAT+AGG | - | chr5_1:47922374-47922393 | None:intergenic | 20.0% |
| !! | CCTATTAAAAATGAAAACTT+TGG | + | chr5_1:47922371-47922390 | Msa0734230:intron | 20.0% |
| !! | GAAATATATGTTTATAAGTG+GGG | - | chr5_1:47922476-47922495 | None:intergenic | 20.0% |
| !! | AGTATTTATATCTAACTAAG+TGG | - | chr5_1:47922282-47922301 | None:intergenic | 20.0% |
| !!! | CCAAAGTTTTCATTTTTAAT+AGG | - | chr5_1:47922374-47922393 | None:intergenic | 20.0% |
| !! | CCTATTAAAAATGAAAACTT+TGG | + | chr5_1:47922371-47922390 | Msa0734230:intron | 20.0% |
| !! | CCTAAATATATGTTTATAAG+TGG | - | chr5_1:47922725-47922744 | None:intergenic | 20.0% |
| !! | CCACTTATAAACATATATTT+AGG | + | chr5_1:47922475-47922494 | Msa0734230:intron | 20.0% |
| !!! | ACTCAGTTTATTGAAATTTT+TGG | - | chr5_1:47923733-47923752 | None:intergenic | 20.0% |
| !! | AAAATAATCATATACTCACT+CGG | - | chr5_1:47923979-47923998 | None:intergenic | 20.0% |
| !!! | ATTGTTTTAGCTCTTAATTT+AGG | - | chr5_1:47924050-47924069 | None:intergenic | 20.0% |
| !! | AATTGATATGTTTAGACATT+CGG | - | chr5_1:47924194-47924213 | None:intergenic | 20.0% |
| !! | CTTGATACATACATAAATAT+TGG | + | chr5_1:47924250-47924269 | Msa0734230:intron | 20.0% |
| !! | ACATACATAAATATTGGATA+AGG | + | chr5_1:47924256-47924275 | Msa0734230:intron | 20.0% |
| !! | ATTATTAAATGAACAGAAAC+AGG | + | chr5_1:47924446-47924465 | Msa0734230:intron | 20.0% |
| !! | AAGATAATACTCAATTTAAG+TGG | - | chr5_1:47924926-47924945 | None:intergenic | 20.0% |
| !! | AATCAATCATATATTTGATG+CGG | + | chr5_1:47924997-47925016 | Msa0734230:intron | 20.0% |
| !!! | GAGTACTAATATGTTTATTT+TGG | + | chr5_1:47925268-47925287 | Msa0734230:intron | 20.0% |
| !! | ATCAAAAAAGAATCTTTCTT+TGG | + | chr5_1:47926217-47926236 | Msa0734230:intron | 20.0% |
| !! | AAAGTAAAGAAAAGATTCTT+TGG | - | chr5_1:47926330-47926349 | None:intergenic | 20.0% |
| !! | TATAAATAGGAAGATATGTT+AGG | - | chr5_1:47926913-47926932 | None:intergenic | 20.0% |
| !! | TAACATATCTTCCTATTTAT+AGG | + | chr5_1:47926912-47926931 | Msa0734230:intron | 20.0% |
| !! | GATTATAGAAACTTCAAAAA+TGG | + | chr5_1:47927013-47927032 | Msa0734230:intron | 20.0% |
| !! | CTTGTAGATATAAGTATTAA+CGG | - | chr5_1:47927040-47927059 | None:intergenic | 20.0% |
| !! | ACAAATAAATTACAAGATCT+TGG | + | chr5_1:47927270-47927289 | Msa0734230:intron | 20.0% |
| !! | CTATATAAATTACAAGATCT+TGG | + | chr5_1:47927341-47927360 | Msa0734230:intron | 20.0% |
| !! | CAAAAAAGAACAAAAAAACT+TGG | - | chr5_1:47927451-47927470 | None:intergenic | 20.0% |
| !!! | TTGAATACTTGTATTTTTCT+TGG | + | chr5_1:47927700-47927719 | Msa0734230:three_prime_UTR | 20.0% |
| !!! | TTGGTTTAACATTATCTTTT+TGG | + | chr5_1:47927757-47927776 | Msa0734230:three_prime_UTR | 20.0% |
| !! | ATAAACTTGTACATGAAATT+GGG | - | chr5_1:47927853-47927872 | None:intergenic | 20.0% |
| !! | TATAAACTTGTACATGAAAT+TGG | - | chr5_1:47927854-47927873 | None:intergenic | 20.0% |
| !!! | GGATTTTTTAATTTCTCTCT+TGG | - | chr5_1:47920556-47920575 | None:intergenic | 25.0% |
| ! | GAATTTGATGAAATGTTATG+TGG | - | chr5_1:47920694-47920713 | None:intergenic | 25.0% |
| !! | AAAGAAATCAGATATGGTTT+TGG | + | chr5_1:47920723-47920742 | Msa0734230:CDS | 25.0% |
| !!! | TTTTGGTGACAAATAATGTT+CGG | + | chr5_1:47920740-47920759 | Msa0734230:CDS | 25.0% |
| ! | TCATCACATTTCTTAGTATT+TGG | - | chr5_1:47920768-47920787 | None:intergenic | 25.0% |
| !!! | TATGCGATGTATTTTTTTGA+GGG | - | chr5_1:47921241-47921260 | None:intergenic | 25.0% |
| !!! | TTATGCGATGTATTTTTTTG+AGG | - | chr5_1:47921242-47921261 | None:intergenic | 25.0% |
| ! | GAACATACAATATGATGATA+TGG | - | chr5_1:47921384-47921403 | None:intergenic | 25.0% |
| ! | TTAGTTCATAAATATGTGGA+CGG | + | chr5_1:47921436-47921455 | Msa0734230:intron | 25.0% |
| !! | ATTTTTACTGCTCAAAGAAA+TGG | - | chr5_1:47921496-47921515 | None:intergenic | 25.0% |
| !! | TCTCATGTCAATTATTTTCA+AGG | + | chr5_1:47922144-47922163 | Msa0734230:intron | 25.0% |
| ! | AATGCTAAAATTTACATGTC+AGG | + | chr5_1:47922203-47922222 | Msa0734230:intron | 25.0% |
| ! | ATGCTAAAATTTACATGTCA+GGG | + | chr5_1:47922204-47922223 | Msa0734230:intron | 25.0% |
| ! | TTAAAAATGAAAACTTTGGG+AGG | + | chr5_1:47922375-47922394 | Msa0734230:intron | 25.0% |
| ! | TTAAAAATGAAAACTTTGGG+AGG | + | chr5_1:47922375-47922394 | Msa0734230:intron | 25.0% |
| !! | ATTTTGTATGATTGTGTTAG+GGG | - | chr5_1:47922679-47922698 | None:intergenic | 25.0% |
| !! | GATTTTGTATGATTGTGTTA+GGG | - | chr5_1:47922680-47922699 | None:intergenic | 25.0% |
| !!! | CTACGATATGTATTTTGAAA+TGG | - | chr5_1:47923185-47923204 | None:intergenic | 25.0% |
| ! | AGTAAAAAAAATATGGGCAA+AGG | + | chr5_1:47923301-47923320 | Msa0734230:intron | 25.0% |
| !! | AACATTCACACAAATTGTTT+TGG | - | chr5_1:47923759-47923778 | None:intergenic | 25.0% |
| ! | TAATATTGCTATGATCATCT+CGG | - | chr5_1:47923822-47923841 | None:intergenic | 25.0% |
| ! | GCACAATGTGTAATTAAAAA+GGG | - | chr5_1:47924003-47924022 | None:intergenic | 25.0% |
| ! | TGCACAATGTGTAATTAAAA+AGG | - | chr5_1:47924004-47924023 | None:intergenic | 25.0% |
| ! | TAAAATCGCAAGTAAACTTA+TGG | + | chr5_1:47924124-47924143 | Msa0734230:intron | 25.0% |
| ! | TCAATTATTGTGACATAGAA+TGG | + | chr5_1:47924357-47924376 | Msa0734230:intron | 25.0% |
| ! | AAAGCGTATTTGAACATTAA+TGG | - | chr5_1:47924522-47924541 | None:intergenic | 25.0% |
| ! | ATTAATGTTCAAATACGCTT+TGG | + | chr5_1:47924521-47924540 | Msa0734230:CDS | 25.0% |
| !!! | TTTTTCGATGAGTTTTCAAT+TGG | - | chr5_1:47924641-47924660 | None:intergenic | 25.0% |
| ! | AAAAATATTTGATGCACAAG+AGG | + | chr5_1:47924656-47924675 | Msa0734230:CDS | 25.0% |
| ! | TTCATTAATTGACGTATCAT+TGG | - | chr5_1:47924789-47924808 | None:intergenic | 25.0% |
| !! | TTTATCTCACGATTCTATTT+TGG | - | chr5_1:47924898-47924917 | None:intergenic | 25.0% |
| ! | TTGAGTATTATCTTCATACA+CGG | + | chr5_1:47924932-47924951 | Msa0734230:intron | 25.0% |
| ! | TGAATGCAAAATTAGATCAA+TGG | + | chr5_1:47925310-47925329 | Msa0734230:intron | 25.0% |
| !! | ATAATTTTGCTACCAATTGT+TGG | + | chr5_1:47925414-47925433 | Msa0734230:CDS | 25.0% |
| !! | TAATTTTGCTACCAATTGTT+GGG | + | chr5_1:47925415-47925434 | Msa0734230:CDS | 25.0% |
| !! | TATTTGGTTTACTATAATGC+AGG | + | chr5_1:47925594-47925613 | Msa0734230:intron | 25.0% |
| ! | TACTCAAATTTCTATGTTTG+TGG | + | chr5_1:47925648-47925667 | Msa0734230:CDS | 25.0% |
| !! | GATTTTGTTGAATCTTTTGT+AGG | + | chr5_1:47925961-47925980 | Msa0734230:intron | 25.0% |
| !!! | TAGATATACTTACTGATTTG+TGG | - | chr5_1:47926070-47926089 | None:intergenic | 25.0% |
| !! | AATTTACAGTAGCTTTTTAC+CGG | + | chr5_1:47926467-47926486 | Msa0734230:intron | 25.0% |
| !!! | TTGTTTTGTTTGTTTTCACT+TGG | - | chr5_1:47926571-47926590 | None:intergenic | 25.0% |
| ! | ATTAAACTCTTTCATGTGAA+AGG | + | chr5_1:47926628-47926647 | Msa0734230:intron | 25.0% |
| ! | TTAAACTCTTTCATGTGAAA+GGG | + | chr5_1:47926629-47926648 | Msa0734230:intron | 25.0% |
| !!! | ATTGTAATCTCACTTTTTTG+TGG | - | chr5_1:47926688-47926707 | None:intergenic | 25.0% |
| ! | CATATTCATCTCCTATAAAT+AGG | - | chr5_1:47926926-47926945 | None:intergenic | 25.0% |
| ! | CATATTCATCTCCTATAAAT+AGG | - | chr5_1:47926926-47926945 | None:intergenic | 25.0% |
| ! | CTATTTATAGGAGATGAATA+TGG | + | chr5_1:47926924-47926943 | Msa0734230:intron | 25.0% |
| ! | TATGATGTTGAGAGTTAAAA+TGG | - | chr5_1:47927065-47927084 | None:intergenic | 25.0% |
| ! | CAAGTAATCACAAAAATTGA+CGG | - | chr5_1:47927320-47927339 | None:intergenic | 25.0% |
| ! | CAAGTAATCACAAAAATTGA+CGG | - | chr5_1:47927320-47927339 | None:intergenic | 25.0% |
| !! | TTGTATTTTTCTTGGCAATA+AGG | + | chr5_1:47927708-47927727 | Msa0734230:three_prime_UTR | 25.0% |
| ! | ATGAATTAATTCCATGAATG+TGG | - | chr5_1:47927825-47927844 | None:intergenic | 25.0% |
| ! | TTTAATTTCTCTCTTGGGTT+GGG | - | chr5_1:47920550-47920569 | None:intergenic | 30.0% |
| !!! | TTTTAATTTCTCTCTTGGGT+TGG | - | chr5_1:47920551-47920570 | None:intergenic | 30.0% |
| ATCAACACTAGCTAAAACTT+TGG | - | chr5_1:47920577-47920596 | None:intergenic | 30.0% | |
| TGTGAGAAAGAAATCAGATA+TGG | + | chr5_1:47920717-47920736 | Msa0734230:CDS | 30.0% | |
| TGTGATGACAAATATGAAAG+AGG | + | chr5_1:47920780-47920799 | Msa0734230:CDS | 30.0% | |
| AAATATGAAAGAGGTGATGT+TGG | + | chr5_1:47920789-47920808 | Msa0734230:CDS | 30.0% | |
| AATATGAAAGAGGTGATGTT+GGG | + | chr5_1:47920790-47920809 | Msa0734230:CDS | 30.0% | |
| !! | TGATTTTTATAGCCTTGGAA+GGG | + | chr5_1:47920861-47920880 | Msa0734230:CDS | 30.0% |
| AAAGTCATGGCATATAAAGA+TGG | - | chr5_1:47921035-47921054 | None:intergenic | 30.0% | |
| TAGTTCATAAATATGTGGAC+GGG | + | chr5_1:47921437-47921456 | Msa0734230:intron | 30.0% | |
| GGTAGAAATCGATGTATTAT+AGG | + | chr5_1:47921833-47921852 | Msa0734230:intron | 30.0% | |
| ATATAAAGTTGTAGCTCAAG+TGG | + | chr5_1:47922074-47922093 | Msa0734230:intron | 30.0% | |
| TTATTTAAGTCCCTTAACTG+TGG | + | chr5_1:47922113-47922132 | Msa0734230:intron | 30.0% | |
| ! | TTTTGTATGATTGTGTTCTG+AGG | - | chr5_1:47922431-47922450 | None:intergenic | 30.0% |
| ! | TCATACAAAATCGACTTATG+AGG | + | chr5_1:47922441-47922460 | Msa0734230:intron | 30.0% |
| ! | TTTTGTATGATTGTGTTAGG+GGG | - | chr5_1:47922678-47922697 | None:intergenic | 30.0% |
| ! | CGATTTTGTATGATTGTGTT+AGG | - | chr5_1:47922434-47922453 | None:intergenic | 30.0% |
| ! | TCATACAAAATCGACTTATG+AGG | + | chr5_1:47922441-47922460 | Msa0734230:intron | 30.0% |
| ! | TCTTACTGAAAATTTTCACC+TGG | + | chr5_1:47923061-47923080 | Msa0734230:intron | 30.0% |
| TGATCGCTTTATACATGTTA+AGG | + | chr5_1:47923206-47923225 | Msa0734230:intron | 30.0% | |
| GATCGCTTTATACATGTTAA+GGG | + | chr5_1:47923207-47923226 | Msa0734230:intron | 30.0% | |
| AAAAAAATATGGGCAAAGGT+AGG | + | chr5_1:47923305-47923324 | Msa0734230:intron | 30.0% | |
| AGGTTATGTGAAAATGTGTA+TGG | + | chr5_1:47923325-47923344 | Msa0734230:intron | 30.0% | |
| TTCATAGATATTACTGCTTC+TGG | - | chr5_1:47923373-47923392 | None:intergenic | 30.0% | |
| AGAAGCAGTAATATCTATGA+AGG | + | chr5_1:47923372-47923391 | Msa0734230:intron | 30.0% | |
| TTCTGGTATCAAATACATGT+CGG | - | chr5_1:47923489-47923508 | None:intergenic | 30.0% | |
| ! | GGAGTTTTTGATACATTTGT+GGG | - | chr5_1:47923601-47923620 | None:intergenic | 30.0% |
| ! | TGGAGTTTTTGATACATTTG+TGG | - | chr5_1:47923602-47923621 | None:intergenic | 30.0% |
| ATAAGCGATTAAGGGTAAAA+TGG | - | chr5_1:47923622-47923641 | None:intergenic | 30.0% | |
| ATTTGTGTGAATGTTTCAGT+TGG | + | chr5_1:47923764-47923783 | Msa0734230:intron | 30.0% | |
| TTACACATTGTGCATACTAA+AGG | + | chr5_1:47924010-47924029 | Msa0734230:intron | 30.0% | |
| ! | AAAATTCAAGTTTACAGTCG+AGG | - | chr5_1:47924224-47924243 | None:intergenic | 30.0% |
| !! | AATTCATTGCTTTTGTTGCT+TGG | + | chr5_1:47924477-47924496 | Msa0734230:CDS | 30.0% |
| !! | TGACAATTGAAGAGTACTAT+TGG | - | chr5_1:47924568-47924587 | None:intergenic | 30.0% |
| !!! | CTATTTTGGTATAGAGTGTA+CGG | - | chr5_1:47924884-47924903 | None:intergenic | 30.0% |
| ! | TGTCAAAAGTTTTACGCTAT+CGG | + | chr5_1:47924959-47924978 | Msa0734230:intron | 30.0% |
| TCATATATTTGATGCGGTTA+TGG | + | chr5_1:47925003-47925022 | Msa0734230:intron | 30.0% | |
| ATCCACTTAAATTATGTGTG+AGG | + | chr5_1:47925111-47925130 | Msa0734230:intron | 30.0% | |
| AACCTCACACATAATTTAAG+TGG | - | chr5_1:47925116-47925135 | None:intergenic | 30.0% | |
| ! | AAAAAGCAGTGATAGGATTT+TGG | + | chr5_1:47925165-47925184 | Msa0734230:intron | 30.0% |
| ATTAGTACTCTTTACCTCAA+TGG | - | chr5_1:47925258-47925277 | None:intergenic | 30.0% | |
| ATTTGCTTACAAGAACAAAC+TGG | + | chr5_1:47925467-47925486 | Msa0734230:CDS | 30.0% | |
| !! | AGCTTTAAACTCATTACATC+TGG | + | chr5_1:47925549-47925568 | Msa0734230:intron | 30.0% |
| !! | CTGGCTTTAAAATTTCTCAA+AGG | + | chr5_1:47925568-47925587 | Msa0734230:intron | 30.0% |
| !! | AATTTCTCAAAGGCACTATT+TGG | + | chr5_1:47925578-47925597 | Msa0734230:intron | 30.0% |
| ATAATGCAGGACATATCTTT+AGG | + | chr5_1:47925607-47925626 | Msa0734230:intron | 30.0% | |
| !! | ATATCTTTAGGTGTTGCTAT+GGG | + | chr5_1:47925619-47925638 | Msa0734230:CDS | 30.0% |
| !! | ATGGATAATGGGTATAAGAA+TGG | + | chr5_1:47925790-47925809 | Msa0734230:CDS | 30.0% |
| ! | AATGGGTATAAGAATGGATT+TGG | + | chr5_1:47925796-47925815 | Msa0734230:CDS | 30.0% |
| ! | TTGTTGAATCTTTTGTAGGA+TGG | + | chr5_1:47925965-47925984 | Msa0734230:intron | 30.0% |
| CGAAGAAGACAAAACATTAA+TGG | + | chr5_1:47926254-47926273 | Msa0734230:intron | 30.0% | |
| AGAAGACAAAACATTAATGG+TGG | + | chr5_1:47926257-47926276 | Msa0734230:intron | 30.0% | |
| TCACCAAGACAAAATAATTG+TGG | + | chr5_1:47926289-47926308 | Msa0734230:intron | 30.0% | |
| !! | TCACCACAATTATTTTGTCT+TGG | - | chr5_1:47926295-47926314 | None:intergenic | 30.0% |
| !! | TATTGGTTCACTATTTGAAC+CGG | - | chr5_1:47926489-47926508 | None:intergenic | 30.0% |
| GTGTTCCTAATCCTATTTAT+AGG | + | chr5_1:47926968-47926987 | Msa0734230:intron | 30.0% | |
| CATCTCCTATAAATAGGATT+AGG | - | chr5_1:47926976-47926995 | None:intergenic | 30.0% | |
| ! | TCTCTATTTCTCAAAAGAAG+TGG | + | chr5_1:47927086-47927105 | Msa0734230:intron | 30.0% |
| TTTACTGTTGCAGATCATTA+TGG | + | chr5_1:47927491-47927510 | Msa0734230:intron | 30.0% | |
| ! | CGAAGATGGATTTCTATAAA+TGG | + | chr5_1:47927617-47927636 | Msa0734230:three_prime_UTR | 30.0% |
| ! | TTAATTTCTCTCTTGGGTTG+GGG | - | chr5_1:47920549-47920568 | None:intergenic | 35.0% |
| TCTTCATTCATGGTTCGAAA+TGG | - | chr5_1:47920646-47920665 | None:intergenic | 35.0% | |
| TCGAACCATGAATGAAGATT+TGG | + | chr5_1:47920648-47920667 | Msa0734230:CDS | 35.0% | |
| GTTCTCCAAATCTTCATTCA+TGG | - | chr5_1:47920656-47920675 | None:intergenic | 35.0% | |
| !!! | TAAGCTTGTTGTGCTTTTTC+CGG | + | chr5_1:47920816-47920835 | Msa0734230:CDS | 35.0% |
| !! | CTGATTTTTATAGCCTTGGA+AGG | + | chr5_1:47920860-47920879 | Msa0734230:CDS | 35.0% |
| TAATTACACTTACCCTTCCA+AGG | - | chr5_1:47920876-47920895 | None:intergenic | 35.0% | |
| !!! | AGATGGTTTTGTGATTACTG+AGG | - | chr5_1:47921018-47921037 | None:intergenic | 35.0% |
| ACATCGCATAATCATCCAAA+TGG | + | chr5_1:47921251-47921270 | Msa0734230:intron | 35.0% | |
| ! | CGAGCTTTCTTGCAATTTTA+TGG | + | chr5_1:47921346-47921365 | Msa0734230:intron | 35.0% |
| AATATACATACCCTTACACG+AGG | + | chr5_1:47921547-47921566 | Msa0734230:intron | 35.0% | |
| ATATACATACCCTTACACGA+GGG | + | chr5_1:47921548-47921567 | Msa0734230:intron | 35.0% | |
| ! | TTTTAGGCACTACGTATACT+AGG | - | chr5_1:47921723-47921742 | None:intergenic | 35.0% |
| ! | CGATTTCTACCTTTTTCTCA+CGG | - | chr5_1:47921824-47921843 | None:intergenic | 35.0% |
| ! | GTTGAGTCTAAAATAACCAG+TGG | + | chr5_1:47921979-47921998 | Msa0734230:intron | 35.0% |
| ! | AGGTTATCTTTTGTCTGATG+TGG | + | chr5_1:47922742-47922761 | Msa0734230:intron | 35.0% |
| !! | ATTTTTGCTTTGAGCCTACT+TGG | + | chr5_1:47922866-47922885 | Msa0734230:CDS | 35.0% |
| ! | ACTGAAAATTTTCACCTGGA+CGG | + | chr5_1:47923065-47923084 | Msa0734230:intron | 35.0% |
| AGGCAAATTGCATATTTCAC+CGG | + | chr5_1:47923099-47923118 | Msa0734230:intron | 35.0% | |
| TACGATTACTCTTTCGTTCA+TGG | + | chr5_1:47923131-47923150 | Msa0734230:intron | 35.0% | |
| GCAGTAATATCTATGAAGGT+CGG | + | chr5_1:47923376-47923395 | Msa0734230:intron | 35.0% | |
| !! | ACACAACATGTATTTGGTGT+CGG | - | chr5_1:47923454-47923473 | None:intergenic | 35.0% |
| ACACTGACACAACATGTATT+TGG | - | chr5_1:47923460-47923479 | None:intergenic | 35.0% | |
| TACCAGAACACACTAATTTG+AGG | + | chr5_1:47923501-47923520 | Msa0734230:intron | 35.0% | |
| TTGATACATTTGTGGGTGTA+GGG | - | chr5_1:47923594-47923613 | None:intergenic | 35.0% | |
| TTTGATACATTTGTGGGTGT+AGG | - | chr5_1:47923595-47923614 | None:intergenic | 35.0% | |
| CATTGTGCATACTAAAGGAA+TGG | + | chr5_1:47924015-47924034 | Msa0734230:intron | 35.0% | |
| ATTTCTCGCAAGTAAACTCA+TGG | + | chr5_1:47924156-47924175 | Msa0734230:intron | 35.0% | |
| TGAACATTAATGGCAGCAAA+TGG | - | chr5_1:47924512-47924531 | None:intergenic | 35.0% | |
| !! | ATGTGTGAGGTTTGATTTTC+AGG | + | chr5_1:47925124-47925143 | Msa0734230:intron | 35.0% |
| GATGATGAAAAAGCAGTGAT+AGG | + | chr5_1:47925158-47925177 | Msa0734230:intron | 35.0% | |
| !!! | GATTTTGGAGTGCATTTAGT+TGG | + | chr5_1:47925180-47925199 | Msa0734230:intron | 35.0% |
| CTTACAAGAACAAACTGGTA+CGG | + | chr5_1:47925472-47925491 | Msa0734230:intron | 35.0% | |
| !! | CATATCTTTAGGTGTTGCTA+TGG | + | chr5_1:47925618-47925637 | Msa0734230:CDS | 35.0% |
| CATGCAACAATCACACTTAA+TGG | - | chr5_1:47925773-47925792 | None:intergenic | 35.0% | |
| CATTAAGTGTGATTGTTGCA+TGG | + | chr5_1:47925771-47925790 | Msa0734230:CDS | 35.0% | |
| TGTGATTGTTGCATGGATAA+TGG | + | chr5_1:47925778-47925797 | Msa0734230:CDS | 35.0% | |
| GTGATTGTTGCATGGATAAT+GGG | + | chr5_1:47925779-47925798 | Msa0734230:CDS | 35.0% | |
| TGTTACAGCCTTTACTTTAC+AGG | + | chr5_1:47925862-47925881 | Msa0734230:CDS | 35.0% | |
| AGAGAAAGTGGAATGTATGA+AGG | - | chr5_1:47925899-47925918 | None:intergenic | 35.0% | |
| GGAACTTCACACTATTTGAA+AGG | + | chr5_1:47925986-47926005 | Msa0734230:CDS | 35.0% | |
| ATCATTGTGAAAGTGACGAT+GGG | + | chr5_1:47926378-47926397 | Msa0734230:intron | 35.0% | |
| CTACTGTAAATTTCGATAGC+CGG | - | chr5_1:47926459-47926478 | None:intergenic | 35.0% | |
| !!! | GTAATCTCACTTTTTTGTGG+TGG | - | chr5_1:47926685-47926704 | None:intergenic | 35.0% |
| ! | GTCTCATTTTCACCATAGTT+TGG | - | chr5_1:47926784-47926803 | None:intergenic | 35.0% |
| ! | TTTTTCTTTGGACAACCAAC+AGG | - | chr5_1:47926856-47926875 | None:intergenic | 35.0% |
| TAGGAAGATATGTTAGGAGT+AGG | - | chr5_1:47926907-47926926 | None:intergenic | 35.0% | |
| TCACAAAAATTGACGGTTCA+TGG | - | chr5_1:47927313-47927332 | None:intergenic | 35.0% | |
| TCACAAAAATTGACGGTTCA+TGG | - | chr5_1:47927313-47927332 | None:intergenic | 35.0% | |
| TATAGTGCACCATCAAACAA+AGG | + | chr5_1:47927417-47927436 | Msa0734230:intron | 35.0% | |
| ! | GAATTCACTCCTTTGTTTGA+TGG | - | chr5_1:47927429-47927448 | None:intergenic | 35.0% |
| !! | TCAGATTGTTTTTCTCACCA+CGG | - | chr5_1:47927563-47927582 | None:intergenic | 35.0% |
| TAGAAATCCATCTTCGAATC+TGG | - | chr5_1:47927613-47927632 | None:intergenic | 35.0% | |
| !!! | CTTGGCAATAAGGCTTTTTT+TGG | + | chr5_1:47927718-47927737 | Msa0734230:three_prime_UTR | 35.0% |
| !!! | GCTTTTTTTGGTCAAGTTCT+TGG | + | chr5_1:47927730-47927749 | Msa0734230:three_prime_UTR | 35.0% |
| TGGTCAAGTTCTTGGAAATT+TGG | + | chr5_1:47927738-47927757 | Msa0734230:three_prime_UTR | 35.0% | |
| TGAATGTGGAGAATCAAAAG+TGG | - | chr5_1:47927811-47927830 | None:intergenic | 35.0% | |
| !! | CTTTTGATTCTCCACATTCA+TGG | + | chr5_1:47927811-47927830 | Msa0734230:intron | 35.0% |
| AAATCAGCAGCAACAGCTAA+AGG | - | chr5_1:47920847-47920866 | None:intergenic | 40.0% | |
| !!! | GCTGCTGATTTTTATAGCCT+TGG | + | chr5_1:47920856-47920875 | Msa0734230:CDS | 40.0% |
| !!! | TGGTTTTGTGATTACTGAGG+CGG | - | chr5_1:47921015-47921034 | None:intergenic | 40.0% |
| ! | CTTTGATAGCCGTGAGAAAA+AGG | + | chr5_1:47921812-47921831 | Msa0734230:intron | 40.0% |
| ! | GAGTCTAAAATAACCAGTGG+CGG | + | chr5_1:47921982-47922001 | Msa0734230:intron | 40.0% |
| !! | AGCCAGCAGTATTTTTATGG+AGG | + | chr5_1:47922005-47922024 | Msa0734230:intron | 40.0% |
| !! | GCCAGCAGTATTTTTATGGA+GGG | + | chr5_1:47922006-47922025 | Msa0734230:intron | 40.0% |
| !! | CCAGCAGTATTTTTATGGAG+GGG | + | chr5_1:47922007-47922026 | Msa0734230:intron | 40.0% |
| AAGTTGTAGCTCAAGTGGTT+TGG | + | chr5_1:47922079-47922098 | Msa0734230:intron | 40.0% | |
| GAGTTTCGAACCACAGTTAA+GGG | - | chr5_1:47922126-47922145 | None:intergenic | 40.0% | |
| AGAGTTTCGAACCACAGTTA+AGG | - | chr5_1:47922127-47922146 | None:intergenic | 40.0% | |
| GCTATGTGTCATGAACTAAG+TGG | - | chr5_1:47922255-47922274 | None:intergenic | 40.0% | |
| !! | TGTATGATTGTGTTCTGAGG+CGG | - | chr5_1:47922428-47922447 | None:intergenic | 40.0% |
| GCTATGTGTCATGAACTAAG+TGG | - | chr5_1:47922255-47922274 | None:intergenic | 40.0% | |
| AGGCTCAAAGCAAAAATCCA+AGG | - | chr5_1:47922863-47922882 | None:intergenic | 40.0% | |
| ACATGCAAACTTACTCAGTG+AGG | - | chr5_1:47922922-47922941 | None:intergenic | 40.0% | |
| GAAAGAGTAATCGTACCTGT+TGG | - | chr5_1:47923126-47923145 | None:intergenic | 40.0% | |
| !! | TCATGGACTAGACTAGTGTA+CGG | + | chr5_1:47923148-47923167 | Msa0734230:intron | 40.0% |
| ACCAAATACGACACAGACAT+GGG | + | chr5_1:47923425-47923444 | Msa0734230:intron | 40.0% | |
| CTCCTCAAATTAGTGTGTTC+TGG | - | chr5_1:47923506-47923525 | None:intergenic | 40.0% | |
| !! | AGGAGTATTCGTGTTTCGTA+GGG | + | chr5_1:47923521-47923540 | Msa0734230:intron | 40.0% |
| TGTGTGAATGTTTCAGTTGG+AGG | + | chr5_1:47923767-47923786 | Msa0734230:intron | 40.0% | |
| GTGTGAATGTTTCAGTTGGA+GGG | + | chr5_1:47923768-47923787 | Msa0734230:intron | 40.0% | |
| CAAGAGAAGGTTTGAGAGAA+TGG | - | chr5_1:47923894-47923913 | None:intergenic | 40.0% | |
| CATTCTCTCAAACCTTCTCT+TGG | + | chr5_1:47923892-47923911 | Msa0734230:CDS | 40.0% | |
| ! | TCAAACCTTCTCTTGGTTCT+AGG | + | chr5_1:47923899-47923918 | Msa0734230:CDS | 40.0% |
| TGGCTTAGCAAACCTTAAGA+GGG | + | chr5_1:47923940-47923959 | Msa0734230:CDS | 40.0% | |
| CATATCTTTGCTCCCTCTTA+AGG | - | chr5_1:47923955-47923974 | None:intergenic | 40.0% | |
| ATGTTCAAATACGCTTTGGC+TGG | + | chr5_1:47924525-47924544 | Msa0734230:CDS | 40.0% | |
| TGTTCAAATACGCTTTGGCT+GGG | + | chr5_1:47924526-47924545 | Msa0734230:CDS | 40.0% | |
| !! | TGTGAGGTTTGATTTTCAGG+TGG | + | chr5_1:47925127-47925146 | Msa0734230:intron | 40.0% |
| TTGGAGTGCATTTAGTTGGT+TGG | + | chr5_1:47925184-47925203 | Msa0734230:intron | 40.0% | |
| AGTGCATTTAGTTGGTTGGT+GGG | + | chr5_1:47925188-47925207 | Msa0734230:intron | 40.0% | |
| TGTGCTTTCTGAGTATGTTG+TGG | + | chr5_1:47925229-47925248 | Msa0734230:intron | 40.0% | |
| GTGCTTTCTGAGTATGTTGT+GGG | + | chr5_1:47925230-47925249 | Msa0734230:intron | 40.0% | |
| GACTTCAATCTGCTTGAAAC+TGG | + | chr5_1:47925818-47925837 | Msa0734230:CDS | 40.0% | |
| TGTGCAGACCTGTAAAGTAA+AGG | - | chr5_1:47925873-47925892 | None:intergenic | 40.0% | |
| GATCATTGTGAAAGTGACGA+TGG | + | chr5_1:47926377-47926396 | Msa0734230:intron | 40.0% | |
| GACAAATCACTGTTTAAGCC+GGG | - | chr5_1:47926415-47926434 | None:intergenic | 40.0% | |
| CGACAAATCACTGTTTAAGC+CGG | - | chr5_1:47926416-47926435 | None:intergenic | 40.0% | |
| TCCAAACACACACCAAACTA+TGG | + | chr5_1:47926769-47926788 | Msa0734230:intron | 40.0% | |
| !! | ACCATAGTTTGGTGTGTGTT+TGG | - | chr5_1:47926773-47926792 | None:intergenic | 40.0% |
| ! | AGACTCATTTTCCCACATAG+AGG | + | chr5_1:47926800-47926819 | Msa0734230:intron | 40.0% |
| GTGATAGCAATCCTCTATGT+GGG | - | chr5_1:47926814-47926833 | None:intergenic | 40.0% | |
| AGTGATAGCAATCCTCTATG+TGG | - | chr5_1:47926815-47926834 | None:intergenic | 40.0% | |
| !! | AGATTGTTTTTCTCACCACG+GGG | - | chr5_1:47927561-47927580 | None:intergenic | 40.0% |
| !! | CAGATTGTTTTTCTCACCAC+GGG | - | chr5_1:47927562-47927581 | None:intergenic | 40.0% |
| AGAAAAACAATCTGACCCTG+CGG | + | chr5_1:47927568-47927587 | Msa0734230:three_prime_UTR | 40.0% | |
| ACGAATTTCAATCATCCGCA+GGG | - | chr5_1:47927586-47927605 | None:intergenic | 40.0% | |
| ATTACTGAGGCGGTGAAGTT+AGG | - | chr5_1:47921005-47921024 | None:intergenic | 45.0% | |
| GAAAGCCACTTGTGACATTG+TGG | - | chr5_1:47921613-47921632 | None:intergenic | 45.0% | |
| !! | CGGAGCCAGCAGTATTTTTA+TGG | + | chr5_1:47922002-47922021 | Msa0734230:intron | 45.0% |
| CCCCTCCATAAAAATACTGC+TGG | - | chr5_1:47922010-47922029 | None:intergenic | 45.0% | |
| TGATTGTGTTAGGGGGACAT+GGG | - | chr5_1:47922671-47922690 | None:intergenic | 45.0% | |
| ATGATTGTGTTAGGGGGACA+TGG | - | chr5_1:47922672-47922691 | None:intergenic | 45.0% | |
| ! | GTTTTTCTCCATCGTAGCCT+TGG | + | chr5_1:47922843-47922862 | Msa0734230:intron | 45.0% |
| GCAAAAATCCAAGGCTACGA+TGG | - | chr5_1:47922854-47922873 | None:intergenic | 45.0% | |
| AGTAATCGTACCTGTTGGTC+CGG | - | chr5_1:47923121-47923140 | None:intergenic | 45.0% | |
| CACCAAATACGACACAGACA+TGG | + | chr5_1:47923424-47923443 | Msa0734230:intron | 45.0% | |
| TCCCATGTCTGTGTCGTATT+TGG | - | chr5_1:47923429-47923448 | None:intergenic | 45.0% | |
| !! | GAGGAGTATTCGTGTTTCGT+AGG | + | chr5_1:47923520-47923539 | Msa0734230:intron | 45.0% |
| GGGCTTCTAAATGCAACTTG+TGG | + | chr5_1:47923788-47923807 | Msa0734230:CDS | 45.0% | |
| GTTGTCAAGTTCTCCTTGCT+TGG | + | chr5_1:47923866-47923885 | Msa0734230:CDS | 45.0% | |
| TGAGAGAATGGAACCAAGCA+AGG | - | chr5_1:47923882-47923901 | None:intergenic | 45.0% | |
| GTGGCTTAGCAAACCTTAAG+AGG | + | chr5_1:47923939-47923958 | Msa0734230:CDS | 45.0% | |
| GTTCAAATACGCTTTGGCTG+GGG | + | chr5_1:47924527-47924546 | Msa0734230:CDS | 45.0% | |
| TTCAAATACGCTTTGGCTGG+GGG | + | chr5_1:47924528-47924547 | Msa0734230:CDS | 45.0% | |
| GAGTGCATTTAGTTGGTTGG+TGG | + | chr5_1:47925187-47925206 | Msa0734230:intron | 45.0% | |
| !! | TTGGTTGGTGGGTATGACAT+TGG | + | chr5_1:47925199-47925218 | Msa0734230:intron | 45.0% |
| GTATGTTGTGGGAACCATTG+AGG | + | chr5_1:47925241-47925260 | Msa0734230:intron | 45.0% | |
| ACTAGGCTGCTTCAGATTCT+TGG | + | chr5_1:47925367-47925386 | Msa0734230:intron | 45.0% | |
| CTAGGCTGCTTCAGATTCTT+GGG | + | chr5_1:47925368-47925387 | Msa0734230:intron | 45.0% | |
| TAGGCTGCTTCAGATTCTTG+GGG | + | chr5_1:47925369-47925388 | Msa0734230:intron | 45.0% | |
| TCTGCAGCATTCCCAACAAT+TGG | - | chr5_1:47925429-47925448 | None:intergenic | 45.0% | |
| CTGCTTGAAACTGGATGTCT+TGG | + | chr5_1:47925827-47925846 | Msa0734230:CDS | 45.0% | |
| TATGCTATCCGAGTCAACTG+AGG | - | chr5_1:47926742-47926761 | None:intergenic | 45.0% | |
| ACGACGATAGCTTCAAAGCA+TGG | - | chr5_1:47927522-47927541 | None:intergenic | 45.0% | |
| ! | TGAATGACTTTGTTTCCCCG+TGG | + | chr5_1:47927543-47927562 | Msa0734230:three_prime_UTR | 45.0% |
| GACGAATTTCAATCATCCGC+AGG | - | chr5_1:47927587-47927606 | None:intergenic | 45.0% | |
| TCTCACAGCTTCAGTTTCGA+AGG | - | chr5_1:47927655-47927674 | None:intergenic | 45.0% | |
| !!! | AAATTTTATAATTAAACAAT+TGG | - | chr5_1:47921676-47921695 | None:intergenic | 5.0% |
| !! | TTCAATAATTAATTATTTAA+AGG | - | chr5_1:47921921-47921940 | None:intergenic | 5.0% |
| !! | ATATATTAGTAAAAAAAATA+TGG | + | chr5_1:47923294-47923313 | Msa0734230:intron | 5.0% |
| !! | TATATTAGTAAAAAAAATAT+GGG | + | chr5_1:47923295-47923314 | Msa0734230:intron | 5.0% |
| !!! | ATATATATTCTAAATTTTTT+AGG | + | chr5_1:47925745-47925764 | Msa0734230:intron | 5.0% |
| GCAACAGCTAAAGGAACAGC+CGG | - | chr5_1:47920838-47920857 | None:intergenic | 50.0% | |
| GCCAACCACAATGTCACAAG+TGG | + | chr5_1:47921605-47921624 | Msa0734230:intron | 50.0% | |
| GCCACTTGTGACATTGTGGT+TGG | - | chr5_1:47921609-47921628 | None:intergenic | 50.0% | |
| GCACTACGTATACTAGGCGA+TGG | - | chr5_1:47921717-47921736 | None:intergenic | 50.0% | |
| AAGCTGACACGTTCAGCTAG+GGG | - | chr5_1:47922899-47922918 | None:intergenic | 50.0% | |
| GAAGCTGACACGTTCAGCTA+GGG | - | chr5_1:47922900-47922919 | None:intergenic | 50.0% | |
| GCATATTTCACCGGACCAAC+AGG | + | chr5_1:47923108-47923127 | Msa0734230:intron | 50.0% | |
| ! | CAGTTTTACCTTGTACCCCC+AGG | + | chr5_1:47923561-47923580 | Msa0734230:intron | 50.0% |
| ! | TTTTACCTTGTACCCCCAGG+CGG | + | chr5_1:47923564-47923583 | Msa0734230:intron | 50.0% |
| AGCTGCCTAGAACCAAGAGA+AGG | - | chr5_1:47923907-47923926 | None:intergenic | 50.0% | |
| !! | GGTTTGCTAAGCCACCACAA+AGG | - | chr5_1:47923934-47923953 | None:intergenic | 50.0% |
| GTTTAAGCCGGGTACGCTTT+GGG | - | chr5_1:47926404-47926423 | None:intergenic | 50.0% | |
| TGTTTAAGCCGGGTACGCTT+TGG | - | chr5_1:47926405-47926424 | None:intergenic | 50.0% | |
| CCTCTCAACCTCAGTTGACT+CGG | + | chr5_1:47926731-47926750 | Msa0734230:intron | 50.0% | |
| CAATCTCTCCTTGCTCCTGT+TGG | + | chr5_1:47926838-47926857 | Msa0734230:intron | 50.0% | |
| TTGGACAACCAACAGGAGCA+AGG | - | chr5_1:47926849-47926868 | None:intergenic | 50.0% | |
| CGTCACTCCAGATTCGAAGA+TGG | + | chr5_1:47927603-47927622 | Msa0734230:three_prime_UTR | 50.0% | |
| ! | CAGGTGCTACCCTCGTGTAA+GGG | - | chr5_1:47921560-47921579 | None:intergenic | 55.0% |
| CTTACACGAGGGTAGCACCT+GGG | + | chr5_1:47921559-47921578 | Msa0734230:intron | 55.0% | |
| !! | GACACTGTGGTTGGTGACAG+TGG | + | chr5_1:47921583-47921602 | Msa0734230:intron | 55.0% |
| !! | TGTGTTCTGAGGCGGAGCTA+GGG | - | chr5_1:47922420-47922439 | None:intergenic | 55.0% |
| !! | TTGTGTTCTGAGGCGGAGCT+AGG | - | chr5_1:47922421-47922440 | None:intergenic | 55.0% |
| TTGTGTTAGGGGGACATGGG+AGG | - | chr5_1:47922668-47922687 | None:intergenic | 55.0% | |
| CTAGGGGAGCAAGTCCAAGT+AGG | - | chr5_1:47922883-47922902 | None:intergenic | 55.0% | |
| GGAAGCTGACACGTTCAGCT+AGG | - | chr5_1:47922901-47922920 | None:intergenic | 55.0% | |
| ! | CCTTCAAGTTCATGCCGTCC+AGG | - | chr5_1:47923082-47923101 | None:intergenic | 55.0% |
| CCTGGACGGCATGAACTTGA+AGG | + | chr5_1:47923079-47923098 | Msa0734230:intron | 55.0% | |
| CTAGGCAGCTCACTCCTTTG+TGG | + | chr5_1:47923917-47923936 | Msa0734230:CDS | 55.0% | |
| GGGAATGCTGCAGAACATGC+TGG | + | chr5_1:47925435-47925454 | Msa0734230:CDS | 55.0% | |
| CCGAGTCAACTGAGGTTGAG+AGG | - | chr5_1:47926734-47926753 | None:intergenic | 55.0% | |
| ! | CCAGGTGCTACCCTCGTGTA+AGG | - | chr5_1:47921561-47921580 | None:intergenic | 60.0% |
| CCTTACACGAGGGTAGCACC+TGG | + | chr5_1:47921558-47921577 | Msa0734230:intron | 60.0% | |
| GTAGCACCTGGGTGACACTG+TGG | + | chr5_1:47921570-47921589 | Msa0734230:intron | 60.0% | |
| CACCTGGGTGACACTGTGGT+TGG | + | chr5_1:47921574-47921593 | Msa0734230:intron | 60.0% | |
| CACCAACCACAGTGTCACCC+AGG | - | chr5_1:47921579-47921598 | None:intergenic | 60.0% | |
| !! | AATACTGCTGGCTCCGCCAC+TGG | - | chr5_1:47921998-47922017 | None:intergenic | 60.0% |
| ! | AGGGGGACATGGGAGGTACA+TGG | - | chr5_1:47922401-47922420 | None:intergenic | 60.0% |
| !! | TGTTCTGAGGCGGAGCTAGG+GGG | - | chr5_1:47922418-47922437 | None:intergenic | 60.0% |
| !! | GTGTTCTGAGGCGGAGCTAG+GGG | - | chr5_1:47922419-47922438 | None:intergenic | 60.0% |
| ! | AGGGGGACATGGGAGGTACA+TGG | - | chr5_1:47922401-47922420 | None:intergenic | 60.0% |
| GGCAGCTCACTCCTTTGTGG+TGG | + | chr5_1:47923920-47923939 | Msa0734230:CDS | 60.0% | |
| AGGCGGAGCTAGGGGGACAT+GGG | - | chr5_1:47922411-47922430 | None:intergenic | 65.0% | |
| ! | GATCTCCGCCTGGGGGTACA+AGG | - | chr5_1:47923572-47923591 | None:intergenic | 65.0% |
| GTGTAGGGATCTCCGCCTGG+GGG | - | chr5_1:47923579-47923598 | None:intergenic | 65.0% | |
| GGTGTAGGGATCTCCGCCTG+GGG | - | chr5_1:47923580-47923599 | None:intergenic | 65.0% | |
| GGGTGTAGGGATCTCCGCCT+GGG | - | chr5_1:47923581-47923600 | None:intergenic | 65.0% | |
| TGGGTGTAGGGATCTCCGCC+TGG | - | chr5_1:47923582-47923601 | None:intergenic | 65.0% | |
| CGATGGGCCCAAAGCGTACC+CGG | + | chr5_1:47926394-47926413 | Msa0734230:intron | 65.0% | |
| CGGAGCTAGGGGGACATGGG+AGG | - | chr5_1:47922408-47922427 | None:intergenic | 70.0% | |
| GAGGCGGAGCTAGGGGGACA+TGG | - | chr5_1:47922412-47922431 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 47920522 | 47927898 | 47920522 | ID=Msa0734230;Name=Msa0734230 |
| chr5_1 | mRNA | 47920522 | 47927898 | 47920522 | ID=Msa0734230-mRNA-1;Parent=Msa0734230;Name=Msa0734230-mRNA-1;_AED=0.16;_eAED=0.16;_QI=91|0.77|0.9|1|0.77|0.7|10|345|379 |
| chr5_1 | exon | 47920522 | 47920882 | 47920522 | ID=Msa0734230-mRNA-1:exon:13720;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47922860 | 47922908 | 47922860 | ID=Msa0734230-mRNA-1:exon:13721;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47923783 | 47923979 | 47923783 | ID=Msa0734230-mRNA-1:exon:13722;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47924462 | 47924677 | 47924462 | ID=Msa0734230-mRNA-1:exon:13723;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47925372 | 47925488 | 47925372 | ID=Msa0734230-mRNA-1:exon:13724;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47925616 | 47925669 | 47925616 | ID=Msa0734230-mRNA-1:exon:13725;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47925767 | 47925883 | 47925767 | ID=Msa0734230-mRNA-1:exon:13726;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47925983 | 47926076 | 47925983 | ID=Msa0734230-mRNA-1:exon:13727;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47927504 | 47927787 | 47927504 | ID=Msa0734230-mRNA-1:exon:13728;Parent=Msa0734230-mRNA-1 |
| chr5_1 | exon | 47927812 | 47927898 | 47927812 | ID=Msa0734230-mRNA-1:exon:13729;Parent=Msa0734230-mRNA-1 |
| chr5_1 | five_prime_UTR | 47920522 | 47920612 | 47920522 | ID=Msa0734230-mRNA-1:five_prime_utr;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47920613 | 47920882 | 47920613 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47922860 | 47922908 | 47922860 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47923783 | 47923979 | 47923783 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47924462 | 47924677 | 47924462 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47925372 | 47925488 | 47925372 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47925616 | 47925669 | 47925616 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47925767 | 47925883 | 47925767 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47925983 | 47926076 | 47925983 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | CDS | 47927504 | 47927529 | 47927504 | ID=Msa0734230-mRNA-1:cds;Parent=Msa0734230-mRNA-1 |
| chr5_1 | three_prime_UTR | 47927530 | 47927787 | 47927530 | ID=Msa0734230-mRNA-1:three_prime_utr;Parent=Msa0734230-mRNA-1 |
| chr5_1 | three_prime_UTR | 47927812 | 47927898 | 47927812 | ID=Msa0734230-mRNA-1:three_prime_utr;Parent=Msa0734230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
