Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0191630 | XP_003593477.2 | 98.756 | 402 | 4 | 1 | 1 | 401 | 1 | 402 | 0.0 | 823 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0191630 | G7ILG8 | 98.756 | 402 | 4 | 1 | 1 | 401 | 1 | 402 | 0.0 | 823 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0042980 | Msa0191630 | -0.846174 | 2.563742e-59 | -8.615850e-47 |
Msa0050760 | Msa0191630 | 0.805134 | 1.545432e-49 | -8.615850e-47 |
Msa0053900 | Msa0191630 | 0.802764 | 4.806319e-49 | -8.615850e-47 |
Msa0063350 | Msa0191630 | -0.806466 | 8.116524e-50 | -8.615850e-47 |
Msa0071550 | Msa0191630 | 0.821010 | 5.068170e-53 | -8.615850e-47 |
Msa0071910 | Msa0191630 | -0.838890 | 2.197339e-57 | -8.615850e-47 |
Msa0090100 | Msa0191630 | 0.827129 | 1.854735e-54 | -8.615850e-47 |
Msa0108850 | Msa0191630 | 0.828316 | 9.621238e-55 | -8.615850e-47 |
Msa0111310 | Msa0191630 | 0.804446 | 2.151848e-49 | -8.615850e-47 |
Msa0120340 | Msa0191630 | 0.802288 | 6.024627e-49 | -8.615850e-47 |
Msa0136890 | Msa0191630 | -0.831389 | 1.716311e-55 | -8.615850e-47 |
Msa0137570 | Msa0191630 | 0.801469 | 8.872039e-49 | -8.615850e-47 |
Msa0148120 | Msa0191630 | 0.802665 | 5.035994e-49 | -8.615850e-47 |
Msa0148360 | Msa0191630 | 0.807214 | 5.637266e-50 | -8.615850e-47 |
Msa0151690 | Msa0191630 | 0.810022 | 1.416776e-50 | -8.615850e-47 |
Msa0151950 | Msa0191630 | 0.830787 | 2.412351e-55 | -8.615850e-47 |
Msa0164360 | Msa0191630 | 0.807192 | 5.698690e-50 | -8.615850e-47 |
Msa0178350 | Msa0191630 | 0.819092 | 1.392151e-52 | -8.615850e-47 |
Msa0188630 | Msa0191630 | 0.828543 | 8.482300e-55 | -8.615850e-47 |
Msa0191630 | Msa0223100 | 0.817381 | 3.396691e-52 | -8.615850e-47 |
Msa0191630 | Msa0223290 | 0.824621 | 7.310832e-54 | -8.615850e-47 |
Msa0191630 | Msa0223380 | 0.857719 | 1.347470e-62 | -8.615850e-47 |
Msa0191630 | Msa0233310 | 0.807224 | 5.610385e-50 | -8.615850e-47 |
Msa0191630 | Msa0233610 | 0.816414 | 5.598817e-52 | -8.615850e-47 |
Msa0191630 | Msa0258760 | 0.800786 | 1.223668e-48 | -8.615850e-47 |
Msa0191630 | Msa0270270 | 0.819150 | 1.351119e-52 | -8.615850e-47 |
Msa0191630 | Msa0279210 | -0.801895 | 7.255821e-49 | -8.615850e-47 |
Msa0191630 | Msa0279250 | -0.811394 | 7.157358e-51 | -8.615850e-47 |
Msa0191630 | Msa0288240 | 0.805654 | 1.202355e-49 | -8.615850e-47 |
Msa0191630 | Msa0288320 | 0.818472 | 1.925716e-52 | -8.615850e-47 |
Msa0191630 | Msa0304700 | 0.803428 | 3.502394e-49 | -8.615850e-47 |
Msa0191630 | Msa0318970 | -0.800186 | 1.621982e-48 | -8.615850e-47 |
Msa0191630 | Msa0326670 | 0.818337 | 2.065968e-52 | -8.615850e-47 |
Msa0191630 | Msa0344830 | 0.801889 | 7.277512e-49 | -8.615850e-47 |
Msa0191630 | Msa0365490 | 0.816841 | 4.491145e-52 | -8.615850e-47 |
Msa0191630 | Msa0370430 | 0.813473 | 2.514359e-51 | -8.615850e-47 |
Msa0191630 | Msa0373930 | 0.811249 | 7.694634e-51 | -8.615850e-47 |
Msa0191630 | Msa0381410 | 0.811802 | 5.835003e-51 | -8.615850e-47 |
Msa0191630 | Msa0389810 | 0.830894 | 2.270331e-55 | -8.615850e-47 |
Msa0191630 | Msa0394340 | 0.806088 | 9.749261e-50 | -8.615850e-47 |
Msa0191630 | Msa0405660 | -0.803408 | 3.536936e-49 | -8.615850e-47 |
Msa0191630 | Msa0414070 | 0.801810 | 7.552645e-49 | -8.615850e-47 |
Msa0191630 | Msa0419620 | -0.812467 | 4.178395e-51 | -8.615850e-47 |
Msa0191630 | Msa0427910 | 0.831114 | 2.004913e-55 | -8.615850e-47 |
Msa0191630 | Msa0438050 | 0.801007 | 1.103097e-48 | -8.615850e-47 |
Msa0191630 | Msa0449760 | 0.806219 | 9.149478e-50 | -8.615850e-47 |
Msa0191630 | Msa0464420 | 0.831935 | 1.258763e-55 | -8.615850e-47 |
Msa0191630 | Msa0464900 | 0.864904 | 8.688409e-65 | -8.615850e-47 |
Msa0191630 | Msa0465680 | -0.842140 | 3.101903e-58 | -8.615850e-47 |
Msa0191630 | Msa0468130 | 0.838649 | 2.537359e-57 | -8.615850e-47 |
Msa0191630 | Msa0473240 | 0.831257 | 1.849281e-55 | -8.615850e-47 |
Msa0191630 | Msa0482190 | -0.830385 | 3.025398e-55 | -8.615850e-47 |
Msa0191630 | Msa0485500 | -0.825758 | 3.936568e-54 | -8.615850e-47 |
Msa0191630 | Msa0491520 | 0.808750 | 2.656426e-50 | -8.615850e-47 |
Msa0191630 | Msa0510040 | 0.831573 | 1.546586e-55 | -8.615850e-47 |
Msa0191630 | Msa0511720 | -0.833891 | 4.108584e-56 | -8.615850e-47 |
Msa0191630 | Msa0527250 | 0.835976 | 1.226173e-56 | -8.615850e-47 |
Msa0191630 | Msa0543900 | 0.815274 | 1.005594e-51 | -8.615850e-47 |
Msa0191630 | Msa0553460 | 0.802756 | 4.824696e-49 | -8.615850e-47 |
Msa0191630 | Msa0561130 | -0.821636 | 3.634507e-53 | -8.615850e-47 |
Msa0191630 | Msa0599580 | 0.804050 | 2.601890e-49 | -8.615850e-47 |
Msa0191630 | Msa0599770 | 0.816020 | 6.857326e-52 | -8.615850e-47 |
Msa0191630 | Msa0607540 | 0.808391 | 3.170116e-50 | -8.615850e-47 |
Msa0191630 | Msa0608710 | 0.825525 | 4.470502e-54 | -8.615850e-47 |
Msa0191630 | Msa0622340 | 0.803405 | 3.541189e-49 | -8.615850e-47 |
Msa0191630 | Msa0638320 | 0.806649 | 7.424796e-50 | -8.615850e-47 |
Msa0191630 | Msa0656270 | 0.817125 | 3.878446e-52 | -8.615850e-47 |
Msa0191630 | Msa0694250 | 0.808593 | 2.869648e-50 | -8.615850e-47 |
Msa0191630 | Msa0700070 | 0.805016 | 1.635718e-49 | -8.615850e-47 |
Msa0191630 | Msa0714600 | 0.803056 | 4.181774e-49 | -8.615850e-47 |
Msa0191630 | Msa0721150 | 0.806578 | 7.685370e-50 | -8.615850e-47 |
Msa0191630 | Msa0722930 | 0.821647 | 3.612645e-53 | -8.615850e-47 |
Msa0191630 | Msa0723140 | 0.828473 | 8.815386e-55 | -8.615850e-47 |
Msa0191630 | Msa0731710 | 0.818630 | 1.773642e-52 | -8.615850e-47 |
Msa0191630 | Msa0757050 | 0.801617 | 8.275881e-49 | -8.615850e-47 |
Msa0191630 | Msa0757080 | 0.807529 | 4.835713e-50 | -8.615850e-47 |
Msa0191630 | Msa0761760 | 0.804609 | 1.989576e-49 | -8.615850e-47 |
Msa0191630 | Msa0782470 | 0.808525 | 2.967863e-50 | -8.615850e-47 |
Msa0191630 | Msa0782490 | 0.807274 | 5.475417e-50 | -8.615850e-47 |
Msa0191630 | Msa0789270 | 0.815517 | 8.879931e-52 | -8.615850e-47 |
Msa0191630 | Msa0789280 | 0.812566 | 3.975867e-51 | -8.615850e-47 |
Msa0191630 | Msa0789290 | 0.813911 | 2.014267e-51 | -8.615850e-47 |
Msa0191630 | Msa0789300 | 0.817674 | 2.917442e-52 | -8.615850e-47 |
Msa0191630 | Msa0804060 | 0.809709 | 1.654484e-50 | -8.615850e-47 |
Msa0191630 | Msa0819670 | 0.828001 | 1.145814e-54 | -8.615850e-47 |
Msa0191630 | Msa0842240 | 0.802370 | 5.793170e-49 | -8.615850e-47 |
Msa0191630 | Msa0844900 | 0.824610 | 7.354878e-54 | -8.615850e-47 |
Msa0191630 | Msa0845000 | 0.838573 | 2.654388e-57 | -8.615850e-47 |
Msa0191630 | Msa0876850 | -0.807536 | 4.818098e-50 | -8.615850e-47 |
Msa0191630 | Msa0908170 | 0.858378 | 8.581485e-63 | -8.615850e-47 |
Msa0191630 | Msa0910980 | -0.827038 | 1.951107e-54 | -8.615850e-47 |
Msa0191630 | Msa0926800 | 0.827133 | 1.850612e-54 | -8.615850e-47 |
Msa0191630 | Msa0927670 | 0.808455 | 3.071963e-50 | -8.615850e-47 |
Msa0191630 | Msa0951720 | 0.805193 | 1.502175e-49 | -8.615850e-47 |
Msa0191630 | Msa0965520 | 0.817655 | 2.947067e-52 | -8.615850e-47 |
Msa0191630 | Msa0982270 | 0.842269 | 2.866714e-58 | -8.615850e-47 |
Msa0191630 | Msa0992490 | -0.809188 | 2.140276e-50 | -8.615850e-47 |
Msa0191630 | Msa0999040 | 0.822505 | 2.285802e-53 | -8.615850e-47 |
Msa0191630 | Msa1006850 | 0.856323 | 3.476860e-62 | -8.615850e-47 |
Msa0191630 | Msa1021340 | 0.826788 | 2.238650e-54 | -8.615850e-47 |
Msa0191630 | Msa1041730 | 0.818482 | 1.915616e-52 | -8.615850e-47 |
Msa0191630 | Msa1047720 | 0.830021 | 3.712835e-55 | -8.615850e-47 |
Msa0191630 | Msa1054410 | 0.820753 | 5.807125e-53 | -8.615850e-47 |
Msa0191630 | Msa1079730 | -0.809780 | 1.597606e-50 | -8.615850e-47 |
Msa0191630 | Msa1080790 | 0.803842 | 2.873968e-49 | -8.615850e-47 |
Msa0191630 | Msa1092090 | 0.839545 | 1.486679e-57 | -8.615850e-47 |
Msa0191630 | Msa1118930 | 0.805343 | 1.397254e-49 | -8.615850e-47 |
Msa0191630 | Msa1124540 | -0.832102 | 1.144920e-55 | -8.615850e-47 |
Msa0191630 | Msa1125080 | 0.815366 | 9.591178e-52 | -8.615850e-47 |
Msa0191630 | Msa1135880 | 0.802146 | 6.443759e-49 | -8.615850e-47 |
Msa0191630 | Msa1141250 | -0.822967 | 1.784185e-53 | -8.615850e-47 |
Msa0191630 | Msa1167220 | 0.814250 | 1.695080e-51 | -8.615850e-47 |
Msa0191630 | Msa1168040 | -0.819864 | 9.285386e-53 | -8.615850e-47 |
Msa0191630 | Msa1199560 | 0.800644 | 1.308181e-48 | -8.615850e-47 |
Msa0191630 | Msa1207460 | -0.804848 | 1.773536e-49 | -8.615850e-47 |
Msa0191630 | Msa1214880 | 0.805595 | 1.237247e-49 | -8.615850e-47 |
Msa0191630 | Msa1217810 | 0.840796 | 7.008705e-58 | -8.615850e-47 |
Msa0191630 | Msa1218650 | 0.800163 | 1.639296e-48 | -8.615850e-47 |
Msa0191630 | Msa1233500 | 0.830018 | 3.719476e-55 | -8.615850e-47 |
Msa0191630 | Msa1258380 | -0.829449 | 5.114913e-55 | -8.615850e-47 |
Msa0191630 | Msa1300860 | 0.800638 | 1.312056e-48 | -8.615850e-47 |
Msa0191630 | Msa1304840 | 0.843258 | 1.565266e-58 | -8.615850e-47 |
Msa0191630 | Msa1307740 | 0.830964 | 2.182895e-55 | -8.615850e-47 |
Msa0191630 | Msa1322190 | 0.834191 | 3.456726e-56 | -8.615850e-47 |
Msa0191630 | Msa1335970 | -0.814516 | 1.480618e-51 | -8.615850e-47 |
Msa0191630 | Msa1364330 | -0.848575 | 5.614788e-60 | -8.615850e-47 |
Msa0191630 | Msa1371580 | 0.834889 | 2.308239e-56 | -8.615850e-47 |
Msa0191630 | Msa1379710 | 0.840691 | 7.466222e-58 | -8.615850e-47 |
Msa0191630 | Msa1419110 | 0.805231 | 1.474875e-49 | -8.615850e-47 |
Msa0191630 | Msa1425010 | 0.817302 | 3.539177e-52 | -8.615850e-47 |
Msa0191630 | Msa1440600 | 0.803479 | 3.417802e-49 | -8.615850e-47 |
Msa0191630 | Msa1444250 | -0.827635 | 1.403476e-54 | -8.615850e-47 |
Msa0191630 | Msa1444740 | 0.816632 | 5.003787e-52 | -8.615850e-47 |
Msa0191630 | Msa1454860 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0191630 | MtrunA17_Chr2g0281421 | 98.756 | 402 | 4 | 1 | 1 | 401 | 1 | 402 | 0.0 | 823 |
Msa0191630 | MtrunA17_Chr4g0047961 | 74.263 | 373 | 84 | 4 | 21 | 391 | 2 | 364 | 0.0 | 570 |
Msa0191630 | MtrunA17_Chr2g0276851 | 55.205 | 317 | 131 | 3 | 78 | 393 | 80 | 386 | 2.27e-125 | 367 |
Msa0191630 | MtrunA17_Chr1g0189401 | 50.272 | 368 | 163 | 6 | 38 | 391 | 30 | 391 | 2.95e-125 | 367 |
Msa0191630 | MtrunA17_Chr3g0123571 | 51.527 | 262 | 117 | 7 | 78 | 338 | 102 | 354 | 1.65e-85 | 265 |
Msa0191630 | MtrunA17_Chr7g0227041 | 47.872 | 282 | 133 | 7 | 56 | 336 | 91 | 359 | 2.59e-83 | 260 |
Msa0191630 | MtrunA17_Chr8g0381601 | 49.805 | 257 | 119 | 7 | 80 | 335 | 103 | 350 | 5.46e-81 | 254 |
Msa0191630 | MtrunA17_Chr8g0381611 | 47.761 | 268 | 130 | 6 | 72 | 338 | 87 | 345 | 2.15e-80 | 252 |
Msa0191630 | MtrunA17_Chr2g0326801 | 42.105 | 323 | 159 | 9 | 71 | 392 | 91 | 386 | 3.78e-78 | 246 |
Msa0191630 | MtrunA17_Chr4g0028891 | 39.429 | 350 | 184 | 8 | 1 | 349 | 63 | 385 | 1.56e-76 | 243 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0191630 | AT1G61240.4 | 66.080 | 398 | 129 | 3 | 1 | 394 | 5 | 400 | 0.0 | 547 |
Msa0191630 | AT1G61240.5 | 66.080 | 398 | 129 | 3 | 1 | 394 | 5 | 400 | 0.0 | 547 |
Msa0191630 | AT1G61240.6 | 66.080 | 398 | 129 | 3 | 1 | 394 | 5 | 400 | 0.0 | 547 |
Msa0191630 | AT1G61240.2 | 66.080 | 398 | 129 | 3 | 1 | 394 | 5 | 400 | 0.0 | 547 |
Msa0191630 | AT1G61240.1 | 66.080 | 398 | 129 | 3 | 1 | 394 | 5 | 400 | 0.0 | 547 |
Msa0191630 | AT1G61240.3 | 66.080 | 398 | 129 | 3 | 1 | 394 | 5 | 400 | 0.0 | 547 |
Msa0191630 | AT1G11170.1 | 64.557 | 395 | 126 | 4 | 1 | 389 | 8 | 394 | 0.0 | 535 |
Msa0191630 | AT1G11170.6 | 64.557 | 395 | 126 | 4 | 1 | 389 | 8 | 394 | 0.0 | 535 |
Msa0191630 | AT1G11170.5 | 64.557 | 395 | 126 | 4 | 1 | 389 | 8 | 394 | 0.0 | 535 |
Msa0191630 | AT1G11170.7 | 64.557 | 395 | 126 | 4 | 1 | 389 | 8 | 394 | 0.0 | 535 |
Msa0191630 | AT1G61240.8 | 73.313 | 326 | 83 | 2 | 73 | 394 | 8 | 333 | 3.55e-180 | 505 |
Msa0191630 | AT1G61240.7 | 67.836 | 342 | 107 | 2 | 1 | 341 | 5 | 344 | 1.83e-172 | 486 |
Msa0191630 | AT1G11170.4 | 67.365 | 334 | 106 | 2 | 1 | 333 | 8 | 339 | 3.46e-171 | 482 |
Msa0191630 | AT1G11170.8 | 67.365 | 334 | 106 | 2 | 1 | 333 | 8 | 339 | 3.46e-171 | 482 |
Msa0191630 | AT1G11170.3 | 67.365 | 334 | 106 | 2 | 1 | 333 | 8 | 339 | 5.61e-171 | 483 |
Msa0191630 | AT1G11170.2 | 66.883 | 308 | 99 | 2 | 1 | 307 | 8 | 313 | 3.73e-154 | 439 |
Msa0191630 | AT4G12840.2 | 57.053 | 319 | 124 | 5 | 80 | 391 | 82 | 394 | 5.53e-131 | 382 |
Msa0191630 | AT4G12840.1 | 56.918 | 318 | 126 | 4 | 80 | 391 | 82 | 394 | 9.96e-131 | 381 |
Msa0191630 | AT4G18530.3 | 55.063 | 316 | 138 | 3 | 78 | 390 | 70 | 384 | 9.07e-127 | 371 |
Msa0191630 | AT4G18530.1 | 55.063 | 316 | 138 | 3 | 78 | 390 | 75 | 389 | 1.01e-126 | 371 |
Msa0191630 | AT4G12840.3 | 56.721 | 305 | 121 | 4 | 93 | 391 | 1 | 300 | 2.93e-124 | 361 |
Msa0191630 | AT1G11170.9 | 63.415 | 246 | 87 | 2 | 1 | 245 | 8 | 251 | 1.52e-110 | 325 |
Msa0191630 | AT4G18530.2 | 59.740 | 231 | 91 | 2 | 78 | 307 | 75 | 304 | 4.36e-101 | 303 |
Msa0191630 | AT1G67850.4 | 53.876 | 258 | 109 | 7 | 80 | 336 | 91 | 339 | 3.79e-84 | 262 |
Msa0191630 | AT1G67850.6 | 53.876 | 258 | 109 | 7 | 80 | 336 | 107 | 355 | 8.28e-84 | 261 |
Msa0191630 | AT1G67850.7 | 53.876 | 258 | 109 | 7 | 80 | 336 | 107 | 355 | 8.28e-84 | 261 |
Msa0191630 | AT1G67850.1 | 53.876 | 258 | 109 | 7 | 80 | 336 | 107 | 355 | 8.28e-84 | 261 |
Msa0191630 | AT1G67850.3 | 53.876 | 258 | 109 | 7 | 80 | 336 | 107 | 355 | 8.28e-84 | 261 |
Msa0191630 | AT1G67850.2 | 53.876 | 258 | 109 | 7 | 80 | 336 | 107 | 355 | 8.28e-84 | 261 |
Msa0191630 | AT1G67850.5 | 53.876 | 258 | 109 | 7 | 80 | 336 | 107 | 355 | 8.28e-84 | 261 |
Msa0191630 | AT1G08040.3 | 51.562 | 256 | 114 | 7 | 80 | 334 | 90 | 336 | 7.87e-83 | 258 |
Msa0191630 | AT1G08040.2 | 51.562 | 256 | 114 | 7 | 80 | 334 | 94 | 340 | 1.02e-82 | 258 |
Msa0191630 | AT1G08040.4 | 51.562 | 256 | 114 | 7 | 80 | 334 | 94 | 340 | 1.02e-82 | 258 |
Msa0191630 | AT1G08040.1 | 51.562 | 256 | 114 | 7 | 80 | 334 | 94 | 340 | 1.02e-82 | 258 |
Msa0191630 | AT1G24570.1 | 51.751 | 257 | 114 | 7 | 80 | 334 | 83 | 331 | 3.11e-81 | 254 |
Msa0191630 | AT1G24570.2 | 51.751 | 257 | 114 | 7 | 80 | 334 | 90 | 338 | 3.35e-81 | 254 |
Msa0191630 | AT2G28310.2 | 48.485 | 264 | 126 | 7 | 72 | 334 | 79 | 333 | 3.01e-80 | 251 |
Msa0191630 | AT2G28310.1 | 48.485 | 264 | 126 | 7 | 72 | 334 | 79 | 333 | 3.01e-80 | 251 |
Msa0191630 | AT2G28310.3 | 48.485 | 264 | 126 | 7 | 72 | 334 | 79 | 333 | 3.01e-80 | 251 |
Msa0191630 | AT3G27470.2 | 46.241 | 266 | 133 | 7 | 71 | 335 | 94 | 350 | 1.81e-78 | 248 |
Msa0191630 | AT3G27470.1 | 46.241 | 266 | 133 | 7 | 71 | 335 | 94 | 350 | 1.81e-78 | 248 |
Msa0191630 | AT3G27470.4 | 46.241 | 266 | 133 | 7 | 71 | 335 | 94 | 350 | 1.81e-78 | 248 |
Msa0191630 | AT3G27470.3 | 46.241 | 266 | 133 | 7 | 71 | 335 | 94 | 350 | 1.81e-78 | 248 |
Msa0191630 | AT3G27470.5 | 46.241 | 266 | 133 | 7 | 71 | 335 | 94 | 350 | 3.15e-78 | 247 |
Msa0191630 | AT3G26440.1 | 48.438 | 256 | 123 | 7 | 80 | 334 | 101 | 348 | 1.48e-77 | 245 |
Msa0191630 | AT3G26440.2 | 48.438 | 256 | 123 | 7 | 80 | 334 | 101 | 348 | 1.48e-77 | 245 |
Msa0191630 | AT3G26440.4 | 48.438 | 256 | 123 | 7 | 80 | 334 | 77 | 324 | 1.71e-77 | 244 |
Msa0191630 | AT3G26440.3 | 48.438 | 256 | 123 | 7 | 80 | 334 | 101 | 348 | 3.02e-77 | 244 |
Msa0191630 | AT3G26440.5 | 48.438 | 256 | 123 | 7 | 80 | 334 | 124 | 371 | 3.21e-77 | 245 |
Msa0191630 | AT3G26440.6 | 48.438 | 256 | 123 | 7 | 80 | 334 | 124 | 371 | 3.90e-77 | 245 |
Msa0191630 | AT1G13000.2 | 48.450 | 258 | 123 | 7 | 80 | 336 | 111 | 359 | 7.67e-77 | 244 |
Msa0191630 | AT1G13000.5 | 48.450 | 258 | 123 | 7 | 80 | 336 | 111 | 359 | 7.67e-77 | 244 |
Msa0191630 | AT1G13000.4 | 48.450 | 258 | 123 | 7 | 80 | 336 | 111 | 359 | 7.67e-77 | 244 |
Msa0191630 | AT1G13000.1 | 48.450 | 258 | 123 | 7 | 80 | 336 | 111 | 359 | 7.67e-77 | 244 |
Msa0191630 | AT1G13000.3 | 49.782 | 229 | 106 | 6 | 80 | 307 | 111 | 331 | 8.04e-69 | 221 |
Msa0191630 | AT2G25905.1 | 61.207 | 116 | 42 | 3 | 112 | 225 | 113 | 227 | 4.88e-41 | 145 |
Find 140 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTTATCATAATTGCATTT+TGG | 0.128282 | 2_1:+7233805 | None:intergenic |
TTGACAAGAAATGGAGTTTA+TGG | 0.185639 | 2_1:-7237387 | Msa0191630:CDS |
GAGTCTTTGATTTCAGTTTC+AGG | 0.229019 | 2_1:-7238490 | Msa0191630:five_prime_UTR |
GAATAGACTAAGAAACTTAA+AGG | 0.249448 | 2_1:+7238932 | None:intergenic |
TTTACTCTTCTTTGAATGTT+AGG | 0.249933 | 2_1:-7238676 | Msa0191630:five_prime_UTR |
TTTATGATTATATCTTTCTT+TGG | 0.260491 | 2_1:-7236400 | Msa0191630:CDS |
TTGTCAGGTGGTTTGCAAAA+AGG | 0.272905 | 2_1:-7236448 | Msa0191630:intron |
TTGCCATCATGAAGTGATTT+TGG | 0.273157 | 2_1:-7233742 | Msa0191630:three_prime_UTR |
GCGTTGTTAATAATCAATAT+TGG | 0.280557 | 2_1:-7233684 | Msa0191630:three_prime_UTR |
AGCAGGGTAAATCAAGTTTC+AGG | 0.280934 | 2_1:-7237724 | Msa0191630:intron |
TCAGGTGCAGTTTAGTGTTT+TGG | 0.306905 | 2_1:-7238472 | Msa0191630:five_prime_UTR |
GTACACACAACTGCCATAAA+AGG | 0.309716 | 2_1:+7237689 | None:intergenic |
AAAATAAAATAAAATAAATA+AGG | 0.325470 | 2_1:+7238538 | None:intergenic |
TTTCTTTGGGATGAGGATTT+AGG | 0.326673 | 2_1:-7236386 | Msa0191630:CDS |
TTATGATTATATCTTTCTTT+GGG | 0.340643 | 2_1:-7236399 | Msa0191630:CDS |
CGTTGTTAATAATCAATATT+GGG | 0.342404 | 2_1:-7233683 | Msa0191630:three_prime_UTR |
TAGCTACAAATACAAAATTA+TGG | 0.342575 | 2_1:+7233964 | None:intergenic |
TCAAGAGACGCATTAGAAAA+TGG | 0.343470 | 2_1:-7234160 | Msa0191630:CDS |
ATTATTATGAGTAGATTAGA+AGG | 0.343558 | 2_1:-7233773 | Msa0191630:three_prime_UTR |
AAAATTATGGCTATAAATAA+AGG | 0.344212 | 2_1:+7233977 | None:intergenic |
TGATGTATCTCTGTTGAATT+CGG | 0.349056 | 2_1:+7236204 | None:intergenic |
AATTGTGAAGGAAGAAGGTT+TGG | 0.352238 | 2_1:-7236250 | Msa0191630:CDS |
ACGTGATTCCTGTTGTTTAG+TGG | 0.360287 | 2_1:-7238406 | Msa0191630:five_prime_UTR |
GAAATTGAATAGTTTATAGA+AGG | 0.368414 | 2_1:-7238784 | Msa0191630:five_prime_UTR |
TGACAAGAAATGGAGTTTAT+GGG | 0.381782 | 2_1:-7237386 | Msa0191630:CDS |
GCTATCAGATTGACAAGAAA+TGG | 0.385093 | 2_1:-7237396 | Msa0191630:intron |
TTTCTAATGCGTCTCTTGAA+TGG | 0.388046 | 2_1:+7234164 | None:intergenic |
TAGTCAATATGTTGTTCATA+AGG | 0.391485 | 2_1:-7234793 | Msa0191630:CDS |
CATCCACATTCCCGTCATAA+TGG | 0.392933 | 2_1:+7236755 | None:intergenic |
GTTAAAATTGTGAAGGAAGA+AGG | 0.395645 | 2_1:-7236255 | Msa0191630:CDS |
TTATTCTAATCGTAACTTGC+TGG | 0.395887 | 2_1:-7236942 | Msa0191630:CDS |
TTCTAGCTCGAACTGTAATT+CGG | 0.401934 | 2_1:+7236181 | None:intergenic |
AGTGAAGGGCCGCCATGCAC+TGG | 0.406203 | 2_1:-7236017 | Msa0191630:CDS |
GATCCAGGGTATGAAAATAA+TGG | 0.411435 | 2_1:-7238840 | Msa0191630:five_prime_UTR |
GATGTATCTCTGTTGAATTC+GGG | 0.427877 | 2_1:+7236205 | None:intergenic |
ATATACTAAAGCTTCTTTCA+CGG | 0.439842 | 2_1:-7234006 | Msa0191630:three_prime_UTR |
TGTCAATGCCATGGTGCAAA+AGG | 0.446139 | 2_1:-7236888 | Msa0191630:intron |
AGTTCTGTTTCCGTGTTCCT+AGG | 0.452268 | 2_1:-7238367 | Msa0191630:intron |
ACTCTGGGTGGGAGCGGTCA+TGG | 0.452686 | 2_1:-7234762 | Msa0191630:CDS |
CATGCAGATCGAGAGAAAAC+CGG | 0.457304 | 2_1:+7235392 | None:intergenic |
ATAGGAAGAACAAGGAAAGA+AGG | 0.459604 | 2_1:+7233841 | None:intergenic |
AATAGACTAAGAAACTTAAA+GGG | 0.465148 | 2_1:+7238933 | None:intergenic |
CAACCAAGCTAGCCTGTGTT+TGG | 0.466424 | 2_1:+7234034 | None:intergenic |
TTATATCTTTCTTTGGGATG+AGG | 0.475151 | 2_1:-7236393 | Msa0191630:CDS |
AGTCAATATGTTGTTCATAA+GGG | 0.475202 | 2_1:-7234792 | Msa0191630:CDS |
ATGCAGATCGAGAGAAAACC+GGG | 0.475369 | 2_1:+7235393 | None:intergenic |
CTCCAGAATGACCTTGTCCA+TGG | 0.476154 | 2_1:-7235112 | Msa0191630:intron |
TACTCATAATAATACTAAGC+TGG | 0.481790 | 2_1:+7233783 | None:intergenic |
TCATAAGGGAATACAGACTC+TGG | 0.485885 | 2_1:-7234778 | Msa0191630:CDS |
TCTTAGTCTATTCAACTACT+TGG | 0.485979 | 2_1:-7238922 | Msa0191630:five_prime_UTR |
GTACCTCTTCTTGATGATAC+TGG | 0.487225 | 2_1:+7237630 | None:intergenic |
AGAATGACCTTGTCCATGGA+TGG | 0.487677 | 2_1:-7235108 | Msa0191630:CDS |
CAAGCTAGCCTGTGTTTGGT+TGG | 0.493962 | 2_1:+7234038 | None:intergenic |
ATGGCTATAAATAAAGGTAA+TGG | 0.495976 | 2_1:+7233983 | None:intergenic |
GATAAAACAAGGGAAGATCC+AGG | 0.496904 | 2_1:-7238855 | Msa0191630:five_prime_UTR |
GTTGAATTCGGGTCAAGAGC+TGG | 0.498857 | 2_1:+7236216 | None:intergenic |
ATAGTTCAGATTTAGAGTTA+AGG | 0.499050 | 2_1:-7237112 | Msa0191630:CDS |
CAACCAAACACAGGCTAGCT+TGG | 0.500866 | 2_1:-7234037 | Msa0191630:three_prime_UTR |
TTAATAATCAATATTGGGTG+AGG | 0.503655 | 2_1:-7233678 | Msa0191630:three_prime_UTR |
GTGTAGGTTTGTGGAAGGTA+TGG | 0.504240 | 2_1:-7235417 | Msa0191630:intron |
GCCTTTCAATTTCTGCGAAG+TGG | 0.506366 | 2_1:+7237157 | None:intergenic |
ATACAACTTGTGTAGGTTTG+TGG | 0.506843 | 2_1:-7235426 | Msa0191630:intron |
TTGTACATGGCATCTCATAC+AGG | 0.510006 | 2_1:-7235366 | Msa0191630:intron |
ACCACTTCGCAGAAATTGAA+AGG | 0.512246 | 2_1:-7237158 | Msa0191630:CDS |
TCATAAATAGAAACTATATC+CGG | 0.514990 | 2_1:+7236416 | None:intergenic |
GAATCTTGACTGGAGTAGTA+AGG | 0.518884 | 2_1:-7236725 | Msa0191630:CDS |
ATACAGACTCTGGGTGGGAG+CGG | 0.519104 | 2_1:-7234768 | Msa0191630:CDS |
GGAAACAGAACTTCAAGCAT+TGG | 0.523050 | 2_1:+7238378 | None:intergenic |
AATGACCTTGTCCATGGATG+GGG | 0.523126 | 2_1:-7235106 | Msa0191630:CDS |
AAAAGAGTGGATTGTCTGAT+GGG | 0.524741 | 2_1:-7237864 | Msa0191630:CDS |
GTGAAGGGCCGCCATGCACT+GGG | 0.532061 | 2_1:-7236016 | Msa0191630:intron |
TCATATCCATTCCCCATCCA+TGG | 0.536469 | 2_1:+7235095 | None:intergenic |
ACTTGTATAGATAATAAAAG+AGG | 0.538143 | 2_1:+7238572 | None:intergenic |
ATGGATGGTGGAATCTTGAC+TGG | 0.538789 | 2_1:-7236735 | Msa0191630:CDS |
CGTGTGAATGCACGGTGGGA+AGG | 0.541146 | 2_1:+7234095 | None:intergenic |
ACGGGAATGTGGATGGATGG+TGG | 0.541381 | 2_1:-7236747 | Msa0191630:CDS |
GAATGACCTTGTCCATGGAT+GGG | 0.541951 | 2_1:-7235107 | Msa0191630:CDS |
CTTCCCACCGTGCATTCACA+CGG | 0.543839 | 2_1:-7234094 | Msa0191630:three_prime_UTR |
CTGATTGAAACGGTCAGTGA+AGG | 0.545932 | 2_1:-7238626 | Msa0191630:five_prime_UTR |
TAGGAAAGAGCGTCACGAAA+GGG | 0.553052 | 2_1:-7238657 | Msa0191630:five_prime_UTR |
GACAAGAAATGGAGTTTATG+GGG | 0.554392 | 2_1:-7237385 | Msa0191630:CDS |
CATTATGACGGGAATGTGGA+TGG | 0.560785 | 2_1:-7236754 | Msa0191630:CDS |
GAGAAGTAATTCGAGGTCAA+AGG | 0.563769 | 2_1:-7237078 | Msa0191630:intron |
GATCTGCATGGTATTGTACA+TGG | 0.564777 | 2_1:-7235379 | Msa0191630:CDS |
GTTGGTACGAAGCTAGCAAA+AGG | 0.566678 | 2_1:+7234067 | None:intergenic |
CCTTGTCCATGGATGGGGAA+TGG | 0.569102 | 2_1:-7235101 | Msa0191630:CDS |
CAGAAGAGTCTATGAACGCA+GGG | 0.569975 | 2_1:-7236063 | Msa0191630:CDS |
TGGGGAATGGATATGAAACT+AGG | 0.570310 | 2_1:-7235088 | Msa0191630:CDS |
ATTTAGAGTTAAGGCCGTTG+TGG | 0.570533 | 2_1:-7237103 | Msa0191630:CDS |
TTGAAGTCTTCAAAGAACGC+TGG | 0.570660 | 2_1:-7234223 | Msa0191630:CDS |
TAGGAAGAACAAGGAAAGAA+GGG | 0.572733 | 2_1:+7233842 | None:intergenic |
CTGGAATCAAGCTATTGCTA+AGG | 0.573781 | 2_1:-7234204 | Msa0191630:CDS |
GTTTGTGGAAGGTATGGCCC+CGG | 0.577031 | 2_1:-7235411 | Msa0191630:CDS |
AGGAGCTCCGTGTGAATGCA+CGG | 0.577590 | 2_1:+7234087 | None:intergenic |
CAGATACGTTAAAATTGTGA+AGG | 0.588568 | 2_1:-7236262 | Msa0191630:CDS |
TGTGGTTGAGAAGTAATTCG+AGG | 0.588802 | 2_1:-7237085 | Msa0191630:CDS |
TTAGGAAAGAGCGTCACGAA+AGG | 0.593864 | 2_1:-7238658 | Msa0191630:five_prime_UTR |
GCTCCGTGTGAATGCACGGT+GGG | 0.595119 | 2_1:+7234091 | None:intergenic |
ATGAACGCAGGGGAAGTACA+AGG | 0.595403 | 2_1:-7236052 | Msa0191630:CDS |
GGTGTTCAGATGCAAGTGAA+GGG | 0.596733 | 2_1:-7236031 | Msa0191630:CDS |
AACGGTTGATGTTCGATCTG+AGG | 0.599867 | 2_1:-7234387 | Msa0191630:intron |
AACTTGTGTAGGTTTGTGGA+AGG | 0.601075 | 2_1:-7235422 | Msa0191630:intron |
ATTCCATTATGACGGGAATG+TGG | 0.604575 | 2_1:-7236758 | Msa0191630:CDS |
GCAGAAGAGTCTATGAACGC+AGG | 0.604969 | 2_1:-7236064 | Msa0191630:intron |
AGGTGTTCAGATGCAAGTGA+AGG | 0.605297 | 2_1:-7236032 | Msa0191630:CDS |
CTAGAAACAAGAAATTTCAC+AGG | 0.606963 | 2_1:-7236164 | Msa0191630:intron |
CATAAGGGAATACAGACTCT+GGG | 0.607149 | 2_1:-7234777 | Msa0191630:CDS |
AACATAAGCACCTAGGAACA+CGG | 0.611982 | 2_1:+7238357 | None:intergenic |
ATGACGGGAATGTGGATGGA+TGG | 0.612152 | 2_1:-7236750 | Msa0191630:CDS |
AAAGCATAATGTCAATGCCA+TGG | 0.613005 | 2_1:-7236897 | Msa0191630:CDS |
CCACCAAAATCACTTCATGA+TGG | 0.613196 | 2_1:+7233739 | None:intergenic |
TGATTGAAACGGTCAGTGAA+GGG | 0.615289 | 2_1:-7238625 | Msa0191630:five_prime_UTR |
AGGAATGGTTACCCAGTGCA+TGG | 0.616589 | 2_1:+7236005 | None:intergenic |
AAGGGAATACAGACTCTGGG+TGG | 0.616811 | 2_1:-7234774 | Msa0191630:CDS |
GAAACTAGGATATTGTGCAC+AGG | 0.619437 | 2_1:-7235074 | Msa0191630:intron |
GCAGAAACAAGGTGGAGCAA+CGG | 0.623386 | 2_1:-7234405 | Msa0191630:intron |
ATAAAACAAGGGAAGATCCA+GGG | 0.627688 | 2_1:-7238854 | Msa0191630:five_prime_UTR |
CCATTCCCCATCCATGGACA+AGG | 0.628237 | 2_1:+7235101 | None:intergenic |
GTACCAGTATCATCAAGAAG+AGG | 0.631560 | 2_1:-7237633 | Msa0191630:intron |
TTTGGTTGATAGCAGAAACA+AGG | 0.632840 | 2_1:-7234416 | Msa0191630:intron |
CTATCTTGTATTATACCTTG+TGG | 0.633616 | 2_1:+7237131 | None:intergenic |
AACTTGCTGGCAATTCCAGT+CGG | 0.637058 | 2_1:-7236929 | Msa0191630:CDS |
TTGGGATGAGGATTTAGGCG+TGG | 0.638845 | 2_1:-7236381 | Msa0191630:CDS |
AAATTGAAAGGCTTGCCACA+AGG | 0.639009 | 2_1:-7237146 | Msa0191630:CDS |
CGTCGATGAAATCGTTGAGA+TGG | 0.642952 | 2_1:-7237897 | Msa0191630:CDS |
AGGGAATACAGACTCTGGGT+GGG | 0.650992 | 2_1:-7234773 | Msa0191630:CDS |
AAGCATCATCCATACCTAGA+CGG | 0.652255 | 2_1:+7236347 | None:intergenic |
GGTTGATAGCAGAAACAAGG+TGG | 0.655086 | 2_1:-7234413 | Msa0191630:intron |
GAGCGGTCATGGTGCAACCA+AGG | 0.659925 | 2_1:-7234751 | Msa0191630:intron |
ACGTGAATCCAACCAAACAC+AGG | 0.667604 | 2_1:-7234046 | Msa0191630:three_prime_UTR |
GTGTTTGGTTGGATTCACGT+TGG | 0.673460 | 2_1:+7234049 | None:intergenic |
TGCGTATTATAGGAAGAACA+AGG | 0.685902 | 2_1:+7233833 | None:intergenic |
AAAGAGTGGATTGTCTGATG+GGG | 0.687816 | 2_1:-7237863 | Msa0191630:intron |
GAATTACTTCTCAACCACAA+CGG | 0.720717 | 2_1:+7237089 | None:intergenic |
AGCTCCGTGTGAATGCACGG+TGG | 0.726182 | 2_1:+7234090 | None:intergenic |
AGATACGAAGACAGTCAACG+TGG | 0.727537 | 2_1:-7234250 | Msa0191630:CDS |
AATGGTTACCCAGTGCATGG+CGG | 0.731647 | 2_1:+7236008 | None:intergenic |
AGAAGAGTCTATGAACGCAG+GGG | 0.738057 | 2_1:-7236062 | Msa0191630:CDS |
GATACGAAGACAGTCAACGT+GGG | 0.739670 | 2_1:-7234249 | Msa0191630:CDS |
TGCAGATCGAGAGAAAACCG+GGG | 0.779069 | 2_1:+7235394 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAAATAAAATAAATA+AGG | + | chr2_1:7234123-7234142 | None:intergenic | 0.0% |
!!! | TTATGCTTTTTTATTTTTTA+AGG | - | chr2_1:7233699-7233718 | Msa0191630:three_prime_UTR | 10.0% |
!!! | TATGCTTTTTTATTTTTTAA+GGG | - | chr2_1:7233700-7233719 | Msa0191630:three_prime_UTR | 10.0% |
!!! | AAAATAATTGTAAAATTTTC+TGG | + | chr2_1:7235880-7235899 | None:intergenic | 10.0% |
!! | TTTAAATATAAAGTTGTTAA+AGG | - | chr2_1:7236732-7236751 | Msa0191630:CDS | 10.0% |
!!! | GTTTTTAATATTCATATATA+TGG | + | chr2_1:7237334-7237353 | None:intergenic | 10.0% |
!!! | TTTTTTTGAAGTTTTGTTTT+TGG | - | chr2_1:7233945-7233964 | Msa0191630:three_prime_UTR | 15.0% |
!!! | CTAAAAAGTTTTATATAGTA+GGG | - | chr2_1:7234529-7234548 | Msa0191630:intron | 15.0% |
!! | TTTAGTAGTTTCATAATTAT+AGG | + | chr2_1:7235140-7235159 | None:intergenic | 15.0% |
!! | TCAAATATCAAATATGAAAA+TGG | + | chr2_1:7235360-7235379 | None:intergenic | 15.0% |
!!! | ATTATTTTATTCCATTATGA+CGG | - | chr2_1:7235892-7235911 | Msa0191630:intron | 15.0% |
!! | TATACACTTATATATGTAAT+TGG | - | chr2_1:7236119-7236138 | Msa0191630:intron | 15.0% |
!!! | TAAGTTTAGATATGTATTTT+TGG | - | chr2_1:7236184-7236203 | Msa0191630:CDS | 15.0% |
!!! | AAGTTTAGATATGTATTTTT+GGG | - | chr2_1:7236185-7236204 | Msa0191630:CDS | 15.0% |
!! | TTTATGATTATATCTTTCTT+TGG | - | chr2_1:7236258-7236277 | Msa0191630:CDS | 15.0% |
!! | TTATGATTATATCTTTCTTT+GGG | - | chr2_1:7236259-7236278 | Msa0191630:CDS | 15.0% |
!! | TAATATAAACTGTTAATCAA+CGG | + | chr2_1:7236935-7236954 | None:intergenic | 15.0% |
!!! | TTTCTATCATTTTTAATAGT+TGG | - | chr2_1:7238025-7238044 | Msa0191630:intron | 15.0% |
!! | AAAAAAAAAAGGTGAAATTT+AGG | + | chr2_1:7238209-7238228 | None:intergenic | 15.0% |
!! | AAAATTATGGCTATAAATAA+AGG | + | chr2_1:7238684-7238703 | None:intergenic | 15.0% |
!!! | ATTTATCATAATTGCATTTT+GGG | + | chr2_1:7238855-7238874 | None:intergenic | 15.0% |
!! | AATAGACTAAGAAACTTAAA+GGG | + | chr2_1:7233728-7233747 | None:intergenic | 20.0% |
!!! | TTTGTCTTTTTCACTTTTTT+GGG | - | chr2_1:7233777-7233796 | Msa0191630:three_prime_UTR | 20.0% |
!! | GAAATTGAATAGTTTATAGA+AGG | - | chr2_1:7233874-7233893 | Msa0191630:three_prime_UTR | 20.0% |
!! | AAGAGGAAAAAAAATAAAAG+AGG | + | chr2_1:7234072-7234091 | None:intergenic | 20.0% |
!! | ACTTGTATAGATAATAAAAG+AGG | + | chr2_1:7234089-7234108 | None:intergenic | 20.0% |
!!! | TGTTTTAAGCAATTTGAATT+TGG | - | chr2_1:7234320-7234339 | Msa0191630:intron | 20.0% |
!!! | CTATATAAAACTTTTTAGGA+GGG | + | chr2_1:7234527-7234546 | None:intergenic | 20.0% |
!!! | ACTATATAAAACTTTTTAGG+AGG | + | chr2_1:7234528-7234547 | None:intergenic | 20.0% |
!!! | CCTACTATATAAAACTTTTT+AGG | + | chr2_1:7234531-7234550 | None:intergenic | 20.0% |
!!! | CCTAAAAAGTTTTATATAGT+AGG | - | chr2_1:7234528-7234547 | Msa0191630:intron | 20.0% |
!! | GTGTTCATTAATTTAGATAA+AGG | - | chr2_1:7234626-7234645 | Msa0191630:intron | 20.0% |
!! | CTATAGTTCTTAAAAGAAAA+GGG | + | chr2_1:7234656-7234675 | None:intergenic | 20.0% |
!! | ACTATAGTTCTTAAAAGAAA+AGG | + | chr2_1:7234657-7234676 | None:intergenic | 20.0% |
!!! | TATTTTGACATTGGTTTTAT+TGG | - | chr2_1:7234911-7234930 | Msa0191630:intron | 20.0% |
!!! | TGGATATATTTTTTACTCAT+TGG | - | chr2_1:7235448-7235467 | Msa0191630:intron | 20.0% |
!!! | TACTTTTTATGATTGTACTT+AGG | - | chr2_1:7235793-7235812 | Msa0191630:intron | 20.0% |
!!! | TTATTTTATTCCATTATGAC+GGG | - | chr2_1:7235893-7235912 | Msa0191630:intron | 20.0% |
!!! | TTCTAAGTTTTTTTTGAACA+AGG | - | chr2_1:7236151-7236170 | Msa0191630:intron | 20.0% |
!!! | TCTAAGTTTTTTTTGAACAA+GGG | - | chr2_1:7236152-7236171 | Msa0191630:intron | 20.0% |
!! | TCATAAATAGAAACTATATC+CGG | + | chr2_1:7236245-7236264 | None:intergenic | 20.0% |
!!! | CAACTTTATATTTAAAGTGT+TGG | + | chr2_1:7236728-7236747 | None:intergenic | 20.0% |
!! | AATAAAGGAAATCAAAAGAA+TGG | + | chr2_1:7237162-7237181 | None:intergenic | 20.0% |
!! | CCAATATTGTTCATAAATAA+AGG | + | chr2_1:7237177-7237196 | None:intergenic | 20.0% |
!!! | CCTTTATTTATGAACAATAT+TGG | - | chr2_1:7237174-7237193 | Msa0191630:intron | 20.0% |
!!! | ACTAAGAATATTGATTTCAT+CGG | - | chr2_1:7237982-7238001 | Msa0191630:intron | 20.0% |
!! | AAAACTTAAAAAGACAACTA+CGG | - | chr2_1:7238106-7238125 | Msa0191630:intron | 20.0% |
!! | AGAAAGGAAAGAAAAAAAAA+AGG | + | chr2_1:7238220-7238239 | None:intergenic | 20.0% |
!!! | TTTTTCTTTCCTTTCTAATT+TGG | - | chr2_1:7238224-7238243 | Msa0191630:intron | 20.0% |
!! | TATTGCTAAGGATAAAAATT+GGG | - | chr2_1:7238466-7238485 | Msa0191630:five_prime_UTR | 20.0% |
!! | TAGCTACAAATACAAAATTA+TGG | + | chr2_1:7238697-7238716 | None:intergenic | 20.0% |
!!! | TTTATCATAATTGCATTTTG+GGG | + | chr2_1:7238854-7238873 | None:intergenic | 20.0% |
!!! | GATTTATCATAATTGCATTT+TGG | + | chr2_1:7238856-7238875 | None:intergenic | 20.0% |
!! | ATTATTATGAGTAGATTAGA+AGG | - | chr2_1:7238885-7238904 | Msa0191630:five_prime_UTR | 20.0% |
!! | CGTTGTTAATAATCAATATT+GGG | - | chr2_1:7238975-7238994 | Msa0191630:five_prime_UTR | 20.0% |
! | GAATAGACTAAGAAACTTAA+AGG | + | chr2_1:7233729-7233748 | None:intergenic | 25.0% |
!!! | CTTTGTCTTTTTCACTTTTT+TGG | - | chr2_1:7233776-7233795 | Msa0191630:three_prime_UTR | 25.0% |
!! | TAGTTTATAGAAGGACTTTT+AGG | - | chr2_1:7233883-7233902 | Msa0191630:three_prime_UTR | 25.0% |
! | TTTACTCTTCTTTGAATGTT+AGG | - | chr2_1:7233982-7234001 | Msa0191630:three_prime_UTR | 25.0% |
!!! | TTCTGGTTTGAAAAACATAT+AGG | - | chr2_1:7234142-7234161 | Msa0191630:exon | 25.0% |
! | TTTATATAGTAGGGTTATGA+AGG | - | chr2_1:7234538-7234557 | Msa0191630:intron | 25.0% |
!!! | AGAACTATAGTATGTTTTTG+AGG | - | chr2_1:7234666-7234685 | Msa0191630:intron | 25.0% |
!!! | GAACTATAGTATGTTTTTGA+GGG | - | chr2_1:7234667-7234686 | Msa0191630:intron | 25.0% |
! | AATGGTGCATTATAATTAGA+AGG | + | chr2_1:7235171-7235190 | None:intergenic | 25.0% |
! | GAATACAACAAGTCATATAA+TGG | + | chr2_1:7235189-7235208 | None:intergenic | 25.0% |
! | ATCAATGAAATTAGCATAGT+CGG | + | chr2_1:7235217-7235236 | None:intergenic | 25.0% |
! | GATGCATTATAGAAAATTTG+TGG | - | chr2_1:7235378-7235397 | Msa0191630:CDS | 25.0% |
! | TAGAAAATTTGTGGTTAATG+TGG | - | chr2_1:7235387-7235406 | Msa0191630:CDS | 25.0% |
! | TTACAATCTTTGCACTAATA+TGG | - | chr2_1:7235415-7235434 | Msa0191630:intron | 25.0% |
!! | ATAGTTCAGATTTAGAGTTA+AGG | - | chr2_1:7235546-7235565 | Msa0191630:intron | 25.0% |
!!! | TTTTTTCTCTATAAATGCCT+CGG | - | chr2_1:7236037-7236056 | Msa0191630:CDS | 25.0% |
! | ACACTTATATATGTAATTGG+TGG | - | chr2_1:7236122-7236141 | Msa0191630:intron | 25.0% |
! | GATCTAACAAAAACAACATA+AGG | + | chr2_1:7237019-7237038 | None:intergenic | 25.0% |
!!! | TGATTTTGTTATGTTTTAGC+CGG | - | chr2_1:7237109-7237128 | Msa0191630:CDS | 25.0% |
!!! | TTTTCGGACAATTTTTTCTA+CGG | - | chr2_1:7237446-7237465 | Msa0191630:intron | 25.0% |
! | TAGTCAATATGTTGTTCATA+AGG | - | chr2_1:7237865-7237884 | Msa0191630:CDS | 25.0% |
! | AGTCAATATGTTGTTCATAA+GGG | - | chr2_1:7237866-7237885 | Msa0191630:CDS | 25.0% |
!!! | TTTTGAAACCTGCAAAAATT+AGG | + | chr2_1:7238090-7238109 | None:intergenic | 25.0% |
! | GGATAGTAAATGAATGAAAT+AGG | + | chr2_1:7238179-7238198 | None:intergenic | 25.0% |
! | CTATTGCTAAGGATAAAAAT+TGG | - | chr2_1:7238465-7238484 | Msa0191630:five_prime_UTR | 25.0% |
! | ATATACTAAAGCTTCTTTCA+CGG | - | chr2_1:7238652-7238671 | Msa0191630:five_prime_UTR | 25.0% |
! | ATGGCTATAAATAAAGGTAA+TGG | + | chr2_1:7238678-7238697 | None:intergenic | 25.0% |
! | GTGCCAAGAAAAAATAAATA+GGG | + | chr2_1:7238797-7238816 | None:intergenic | 25.0% |
!! | TTATCATAATTGCATTTTGG+GGG | + | chr2_1:7238853-7238872 | None:intergenic | 25.0% |
! | TACTCATAATAATACTAAGC+TGG | + | chr2_1:7238878-7238897 | None:intergenic | 25.0% |
! | GCGTTGTTAATAATCAATAT+TGG | - | chr2_1:7238974-7238993 | Msa0191630:five_prime_UTR | 25.0% |
! | TTAATAATCAATATTGGGTG+AGG | - | chr2_1:7238980-7238999 | Msa0191630:five_prime_UTR | 25.0% |
TCTTAGTCTATTCAACTACT+TGG | - | chr2_1:7233736-7233755 | Msa0191630:three_prime_UTR | 30.0% | |
!!! | TTTTTGGGTCTGATAAAACA+AGG | - | chr2_1:7233792-7233811 | Msa0191630:three_prime_UTR | 30.0% |
!! | TTTTGGGTCTGATAAAACAA+GGG | - | chr2_1:7233793-7233812 | Msa0191630:three_prime_UTR | 30.0% |
!!! | GGTTTTAGATCTGATTGAAA+CGG | - | chr2_1:7234022-7234041 | Msa0191630:three_prime_UTR | 30.0% |
!! | CTTGTGTGTTGGTTATTTAT+TGG | - | chr2_1:7234358-7234377 | Msa0191630:intron | 30.0% |
!! | TCTGTGTGTTGGTTATTTAT+TGG | - | chr2_1:7234404-7234423 | Msa0191630:CDS | 30.0% |
TATGAAAGAATGTCATGTCT+TGG | - | chr2_1:7234588-7234607 | Msa0191630:intron | 30.0% | |
AATGAACACTAACTAAGCTA+AGG | + | chr2_1:7234615-7234634 | None:intergenic | 30.0% | |
!! | ATAGTATGTTTTTGAGGGTA+TGG | - | chr2_1:7234672-7234691 | Msa0191630:intron | 30.0% |
AACTGCAACACAAAACATAT+TGG | + | chr2_1:7234710-7234729 | None:intergenic | 30.0% | |
!!! | TCCTTTTTTTCTTCTAGTCT+TGG | - | chr2_1:7234822-7234841 | Msa0191630:CDS | 30.0% |
ACCAAGACTAGAAGAAAAAA+AGG | + | chr2_1:7234826-7234845 | None:intergenic | 30.0% | |
!!! | TCTAGTCTTGGTGTTTTTTT+AGG | - | chr2_1:7234834-7234853 | Msa0191630:intron | 30.0% |
! | GATGAAACAATTGCCTTTTA+TGG | - | chr2_1:7234956-7234975 | Msa0191630:intron | 30.0% |
GTTTCATAATTATAGGACTC+TGG | + | chr2_1:7235133-7235152 | None:intergenic | 30.0% | |
TTGACAAGAAATGGAGTTTA+TGG | - | chr2_1:7235271-7235290 | Msa0191630:intron | 30.0% | |
TGACAAGAAATGGAGTTTAT+GGG | - | chr2_1:7235272-7235291 | Msa0191630:intron | 30.0% | |
CAGAGGTAAAAAAAATCTCA+TGG | - | chr2_1:7235301-7235320 | Msa0191630:intron | 30.0% | |
GAAGAATCAGAAAGCTAATA+AGG | + | chr2_1:7235338-7235357 | None:intergenic | 30.0% | |
! | ACTAATATGGTTCTGTACTT+TGG | - | chr2_1:7235428-7235447 | Msa0191630:intron | 30.0% |
CTATCTTGTATTATACCTTG+TGG | + | chr2_1:7235530-7235549 | None:intergenic | 30.0% | |
TAACAAACCTTATGATTGCT+TGG | - | chr2_1:7235665-7235684 | Msa0191630:intron | 30.0% | |
! | TTATTCTAATCGTAACTTGC+TGG | - | chr2_1:7235716-7235735 | Msa0191630:intron | 30.0% |
ATATGTTATAGAGGGTGAAT+TGG | - | chr2_1:7236062-7236081 | Msa0191630:CDS | 30.0% | |
TATGTTATAGAGGGTGAATT+GGG | - | chr2_1:7236063-7236082 | Msa0191630:CDS | 30.0% | |
TATATGCATGCACATAGATA+TGG | + | chr2_1:7236103-7236122 | None:intergenic | 30.0% | |
!!! | ATGTATTTTTGGGTTTTGTC+AGG | - | chr2_1:7236195-7236214 | Msa0191630:CDS | 30.0% |
!! | TTATATCTTTCTTTGGGATG+AGG | - | chr2_1:7236265-7236284 | Msa0191630:intron | 30.0% |
CAGATACGTTAAAATTGTGA+AGG | - | chr2_1:7236396-7236415 | Msa0191630:CDS | 30.0% | |
GTTAAAATTGTGAAGGAAGA+AGG | - | chr2_1:7236403-7236422 | Msa0191630:CDS | 30.0% | |
TGATGTATCTCTGTTGAATT+CGG | + | chr2_1:7236457-7236476 | None:intergenic | 30.0% | |
CTAGAAACAAGAAATTTCAC+AGG | - | chr2_1:7236494-7236513 | Msa0191630:intron | 30.0% | |
! | CTTACAATGAACATTTTCGT+TGG | - | chr2_1:7236570-7236589 | Msa0191630:intron | 30.0% |
TAAATTTACACAGCTTTACC+AGG | + | chr2_1:7236688-7236707 | None:intergenic | 30.0% | |
! | ATTTGTTAGCAAGTTGTGAT+TGG | - | chr2_1:7236773-7236792 | Msa0191630:CDS | 30.0% |
TACACTGACAATGCAAAATT+TGG | - | chr2_1:7236815-7236834 | Msa0191630:intron | 30.0% | |
AGGAAATCAAAAGAATGGAA+GGG | + | chr2_1:7237157-7237176 | None:intergenic | 30.0% | |
AAGGAAATCAAAAGAATGGA+AGG | + | chr2_1:7237158-7237177 | None:intergenic | 30.0% | |
AACATGAATACAACTTGTGT+AGG | - | chr2_1:7237225-7237244 | Msa0191630:intron | 30.0% | |
GAAAATTACAAAAGAGACAG+GGG | + | chr2_1:7237431-7237450 | None:intergenic | 30.0% | |
CGAAAATTACAAAAGAGACA+GGG | + | chr2_1:7237432-7237451 | None:intergenic | 30.0% | |
! | CCTGTCTCTTTTGTAATTTT+CGG | - | chr2_1:7237430-7237449 | Msa0191630:intron | 30.0% |
!!! | TTTCGGACAATTTTTTCTAC+GGG | - | chr2_1:7237447-7237466 | Msa0191630:intron | 30.0% |
ATCAAAATAGTCCATGTTCT+TGG | - | chr2_1:7237480-7237499 | Msa0191630:intron | 30.0% | |
CAGTAGTATACTAGTAATTC+TGG | + | chr2_1:7237629-7237648 | None:intergenic | 30.0% | |
AAAAAGACGCTTAAACATGA+GGG | + | chr2_1:7237770-7237789 | None:intergenic | 30.0% | |
TAAAAAGACGCTTAAACATG+AGG | + | chr2_1:7237771-7237790 | None:intergenic | 30.0% | |
TTAACGAAGCTAATATATGG+AGG | + | chr2_1:7237942-7237961 | None:intergenic | 30.0% | |
AGGTTAACGAAGCTAATATA+TGG | + | chr2_1:7237945-7237964 | None:intergenic | 30.0% | |
!! | AAGAATATTGATTTCATCGG+TGG | - | chr2_1:7237985-7238004 | Msa0191630:intron | 30.0% |
AAAGATGCTGTTACAAGAAA+TGG | + | chr2_1:7238067-7238086 | None:intergenic | 30.0% | |
TGCTATCAACCAAATTAGAA+AGG | + | chr2_1:7238236-7238255 | None:intergenic | 30.0% | |
! | TGTTGTTTACTTTGCTAATG+TGG | - | chr2_1:7238378-7238397 | Msa0191630:five_prime_UTR | 30.0% |
!!! | GCTCCCTATTTATTTTTTCT+TGG | - | chr2_1:7238791-7238810 | Msa0191630:five_prime_UTR | 30.0% |
GGTGCCAAGAAAAAATAAAT+AGG | + | chr2_1:7238798-7238817 | None:intergenic | 30.0% | |
!!! | CATGGTCCACATTTTTTTTA+AGG | - | chr2_1:7238944-7238963 | Msa0191630:five_prime_UTR | 30.0% |
!!! | GTCCACATTTTTTTTAAGGT+AGG | - | chr2_1:7238948-7238967 | Msa0191630:five_prime_UTR | 30.0% |
GTCCTACCTTAAAAAAAATG+TGG | + | chr2_1:7238953-7238972 | None:intergenic | 30.0% | |
ATAAAACAAGGGAAGATCCA+GGG | - | chr2_1:7233804-7233823 | Msa0191630:three_prime_UTR | 35.0% | |
GATCCAGGGTATGAAAATAA+TGG | - | chr2_1:7233818-7233837 | Msa0191630:three_prime_UTR | 35.0% | |
!! | GGACTTTTAGGTGAATGAAT+AGG | - | chr2_1:7233895-7233914 | Msa0191630:three_prime_UTR | 35.0% |
! | GAGTCTTTGATTTCAGTTTC+AGG | - | chr2_1:7234168-7234187 | Msa0191630:CDS | 35.0% |
! | TGGATTTTCCACTAAACAAC+AGG | + | chr2_1:7234263-7234282 | None:intergenic | 35.0% |
TGCTTAAAACATAAGCACCT+AGG | + | chr2_1:7234311-7234330 | None:intergenic | 35.0% | |
!!! | GTTTTGTTTTGCTTGTGTGT+TGG | - | chr2_1:7234347-7234366 | Msa0191630:intron | 35.0% |
!! | TATGTGTTGATTCTGTGTGT+TGG | - | chr2_1:7234393-7234412 | Msa0191630:CDS | 35.0% |
!! | AAACTTTTTAGGAGGGACTA+AGG | + | chr2_1:7234520-7234539 | None:intergenic | 35.0% |
ATAGTAGGGTTATGAAGGTT+AGG | - | chr2_1:7234543-7234562 | Msa0191630:intron | 35.0% | |
!! | AAAAAGAGTGGATTGTCTGA+TGG | - | chr2_1:7234793-7234812 | Msa0191630:CDS | 35.0% |
!! | AAAAGAGTGGATTGTCTGAT+GGG | - | chr2_1:7234794-7234813 | Msa0191630:CDS | 35.0% |
!!! | CGACTTCACTATTTTGACAT+TGG | - | chr2_1:7234902-7234921 | Msa0191630:intron | 35.0% |
!!! | ACATTGGTTTTATTGGAGCA+GGG | - | chr2_1:7234918-7234937 | Msa0191630:intron | 35.0% |
GCTATCAGATTGACAAGAAA+TGG | - | chr2_1:7235262-7235281 | Msa0191630:intron | 35.0% | |
GACAAGAAATGGAGTTTATG+GGG | - | chr2_1:7235273-7235292 | Msa0191630:intron | 35.0% | |
GAATTACTTCTCAACCACAA+CGG | + | chr2_1:7235572-7235591 | None:intergenic | 35.0% | |
!! | ATCATAAGGTTTGTTAGCTC+TGG | + | chr2_1:7235661-7235680 | None:intergenic | 35.0% |
TGATTGTGAAATTGCAGTCT+AGG | - | chr2_1:7235691-7235710 | Msa0191630:intron | 35.0% | |
GATTGTGAAATTGCAGTCTA+GGG | - | chr2_1:7235692-7235711 | Msa0191630:intron | 35.0% | |
!! | TGCTTTTGTTTAATACCGAC+TGG | + | chr2_1:7235747-7235766 | None:intergenic | 35.0% |
AAAGCATAATGTCAATGCCA+TGG | - | chr2_1:7235761-7235780 | Msa0191630:intron | 35.0% | |
!!! | AAAAAGTACCTTTTGCACCA+TGG | + | chr2_1:7235781-7235800 | None:intergenic | 35.0% |
!!! | TATTTTTGGGTTTTGTCAGG+TGG | - | chr2_1:7236198-7236217 | Msa0191630:CDS | 35.0% |
!! | TTTCTTTGGGATGAGGATTT+AGG | - | chr2_1:7236272-7236291 | Msa0191630:intron | 35.0% |
TCATCAGCTGGTGTTTATAT+TGG | - | chr2_1:7236350-7236369 | Msa0191630:intron | 35.0% | |
AATTGTGAAGGAAGAAGGTT+TGG | - | chr2_1:7236408-7236427 | Msa0191630:CDS | 35.0% | |
GATGTATCTCTGTTGAATTC+GGG | + | chr2_1:7236456-7236475 | None:intergenic | 35.0% | |
!! | TTCTAGCTCGAACTGTAATT+CGG | + | chr2_1:7236480-7236499 | None:intergenic | 35.0% |
!! | AAGTGTTGGCAAATTGTGAT+TGG | + | chr2_1:7236714-7236733 | None:intergenic | 35.0% |
AAGTGAATTCCTCACTTAAG+TGG | - | chr2_1:7236971-7236990 | Msa0191630:intron | 35.0% | |
ATACAACTTGTGTAGGTTTG+TGG | - | chr2_1:7237232-7237251 | Msa0191630:intron | 35.0% | |
GAATTCCACCACTTGATTTA+GGG | + | chr2_1:7237367-7237386 | None:intergenic | 35.0% | |
AGAATTCCACCACTTGATTT+AGG | + | chr2_1:7237368-7237387 | None:intergenic | 35.0% | |
CCGAAAATTACAAAAGAGAC+AGG | + | chr2_1:7237433-7237452 | None:intergenic | 35.0% | |
ATGTATATACCAGCTGAACT+TGG | - | chr2_1:7237728-7237747 | Msa0191630:intron | 35.0% | |
!!! | TGAGATCAATGTCGTTTTTC+AGG | - | chr2_1:7237811-7237830 | Msa0191630:intron | 35.0% |
!!! | GAGATCAATGTCGTTTTTCA+GGG | - | chr2_1:7237812-7237831 | Msa0191630:intron | 35.0% |
GGTGATCGAACTAAAAAAGT+GGG | - | chr2_1:7237833-7237852 | Msa0191630:intron | 35.0% | |
! | GCATCTTTCCTAATTTTTGC+AGG | - | chr2_1:7238079-7238098 | Msa0191630:intron | 35.0% |
!! | TTTGGTTGATAGCAGAAACA+AGG | - | chr2_1:7238242-7238261 | Msa0191630:intron | 35.0% |
! | GTAAGACTTTTGAGCTATTC+TGG | - | chr2_1:7238293-7238312 | Msa0191630:intron | 35.0% |
TTTCTAATGCGTCTCTTGAA+TGG | + | chr2_1:7238497-7238516 | None:intergenic | 35.0% | |
TCAAGAGACGCATTAGAAAA+TGG | - | chr2_1:7238498-7238517 | Msa0191630:five_prime_UTR | 35.0% | |
ATCTACAGCAGAAGCAAAAA+TGG | + | chr2_1:7238541-7238560 | None:intergenic | 35.0% | |
TAGGAAGAACAAGGAAAGAA+GGG | + | chr2_1:7238819-7238838 | None:intergenic | 35.0% | |
ATAGGAAGAACAAGGAAAGA+AGG | + | chr2_1:7238820-7238839 | None:intergenic | 35.0% | |
TGCGTATTATAGGAAGAACA+AGG | + | chr2_1:7238828-7238847 | None:intergenic | 35.0% | |
! | TTGCCATCATGAAGTGATTT+TGG | - | chr2_1:7238916-7238935 | Msa0191630:five_prime_UTR | 35.0% |
!! | TTGGGTGAGGTTTTATGTAA+TGG | - | chr2_1:7238993-7239012 | Msa0191630:five_prime_UTR | 35.0% |
GATAAAACAAGGGAAGATCC+AGG | - | chr2_1:7233803-7233822 | Msa0191630:three_prime_UTR | 40.0% | |
! | CAGCCATTATTTTCATACCC+TGG | + | chr2_1:7233824-7233843 | None:intergenic | 40.0% |
TGATTGAAACGGTCAGTGAA+GGG | - | chr2_1:7234033-7234052 | Msa0191630:three_prime_UTR | 40.0% | |
! | TCAGGTGCAGTTTAGTGTTT+TGG | - | chr2_1:7234186-7234205 | Msa0191630:CDS | 40.0% |
! | ACGTGATTCCTGTTGTTTAG+TGG | - | chr2_1:7234252-7234271 | Msa0191630:intron | 40.0% |
GGAAACAGAACTTCAAGCAT+TGG | + | chr2_1:7234283-7234302 | None:intergenic | 40.0% | |
AACATAAGCACCTAGGAACA+CGG | + | chr2_1:7234304-7234323 | None:intergenic | 40.0% | |
!! | ATGTGTTGACTCAGCAATCT+AGG | - | chr2_1:7234440-7234459 | Msa0191630:intron | 40.0% |
!! | TGTGTTGACTCAGCAATCTA+GGG | - | chr2_1:7234441-7234460 | Msa0191630:intron | 40.0% |
TGGCTGATGAGAAAAAAGAG+TGG | - | chr2_1:7234781-7234800 | Msa0191630:CDS | 40.0% | |
!! | AAAGAGTGGATTGTCTGATG+GGG | - | chr2_1:7234795-7234814 | Msa0191630:CDS | 40.0% |
!!! | GACATTGGTTTTATTGGAGC+AGG | - | chr2_1:7234917-7234936 | Msa0191630:intron | 40.0% |
AGCAGGGTAAATCAAGTTTC+AGG | - | chr2_1:7234934-7234953 | Msa0191630:intron | 40.0% | |
GTACACACAACTGCCATAAA+AGG | + | chr2_1:7234972-7234991 | None:intergenic | 40.0% | |
GTACCAGTATCATCAAGAAG+AGG | - | chr2_1:7235025-7235044 | Msa0191630:intron | 40.0% | |
! | GTACCTCTTCTTGATGATAC+TGG | + | chr2_1:7235031-7235050 | None:intergenic | 40.0% |
TCTTGTCAATCTGATAGCAG+CGG | + | chr2_1:7235260-7235279 | None:intergenic | 40.0% | |
GAGTTTATGGGGAAAAACAG+AGG | - | chr2_1:7235284-7235303 | Msa0191630:intron | 40.0% | |
ACCACTTCGCAGAAATTGAA+AGG | - | chr2_1:7235500-7235519 | Msa0191630:intron | 40.0% | |
AAATTGAAAGGCTTGCCACA+AGG | - | chr2_1:7235512-7235531 | Msa0191630:intron | 40.0% | |
! | ATTTAGAGTTAAGGCCGTTG+TGG | - | chr2_1:7235555-7235574 | Msa0191630:intron | 40.0% |
TGTGGTTGAGAAGTAATTCG+AGG | - | chr2_1:7235573-7235592 | Msa0191630:intron | 40.0% | |
GAGAAGTAATTCGAGGTCAA+AGG | - | chr2_1:7235580-7235599 | Msa0191630:intron | 40.0% | |
CAAACCTTATGATTGCTTGG+TGG | - | chr2_1:7235668-7235687 | Msa0191630:intron | 40.0% | |
ATCACCACCAAGCAATCATA+AGG | + | chr2_1:7235675-7235694 | None:intergenic | 40.0% | |
! | ATTCCATTATGACGGGAATG+TGG | - | chr2_1:7235900-7235919 | Msa0191630:intron | 40.0% |
GAATCTTGACTGGAGTAGTA+AGG | - | chr2_1:7235933-7235952 | Msa0191630:intron | 40.0% | |
CCTCGGCAATATGTTATAGA+GGG | - | chr2_1:7236054-7236073 | Msa0191630:CDS | 40.0% | |
! | TTGTCAGGTGGTTTGCAAAA+AGG | - | chr2_1:7236210-7236229 | Msa0191630:CDS | 40.0% |
TGCAAAAAGGTTTCTGCATC+CGG | - | chr2_1:7236223-7236242 | Msa0191630:CDS | 40.0% | |
! | TGGAACATTTTTCTCCGTCT+AGG | - | chr2_1:7236297-7236316 | Msa0191630:intron | 40.0% |
! | CATTTTTCTCCGTCTAGGTA+TGG | - | chr2_1:7236302-7236321 | Msa0191630:intron | 40.0% |
AAGCATCATCCATACCTAGA+CGG | + | chr2_1:7236314-7236333 | None:intergenic | 40.0% | |
TTTGATTGCTCTTCATCAGC+TGG | - | chr2_1:7236338-7236357 | Msa0191630:intron | 40.0% | |
TTTAACGTATCTGCAGAAGC+AGG | + | chr2_1:7236389-7236408 | None:intergenic | 40.0% | |
ACCATTCCTTTCTTTGAACC+TGG | - | chr2_1:7236667-7236686 | Msa0191630:intron | 40.0% | |
ACCAGGTTCAAAGAAAGGAA+TGG | + | chr2_1:7236671-7236690 | None:intergenic | 40.0% | |
GCTTTACCAGGTTCAAAGAA+AGG | + | chr2_1:7236676-7236695 | None:intergenic | 40.0% | |
TCTCACTTTAGTCACTTCAG+AGG | + | chr2_1:7236843-7236862 | None:intergenic | 40.0% | |
AAGGGAAACAGTGTAACACA+AGG | + | chr2_1:7237139-7237158 | None:intergenic | 40.0% | |
AACTTGTGTAGGTTTGTGGA+AGG | - | chr2_1:7237236-7237255 | Msa0191630:intron | 40.0% | |
GATCTGCATGGTATTGTACA+TGG | - | chr2_1:7237279-7237298 | Msa0191630:intron | 40.0% | |
TTGTACATGGCATCTCATAC+AGG | - | chr2_1:7237292-7237311 | Msa0191630:intron | 40.0% | |
! | TAGTCCATGTTCTTGGTAGT+TGG | - | chr2_1:7237487-7237506 | Msa0191630:intron | 40.0% |
AATGCCAACTACCAAGAACA+TGG | + | chr2_1:7237494-7237513 | None:intergenic | 40.0% | |
TGGGGAATGGATATGAAACT+AGG | - | chr2_1:7237570-7237589 | Msa0191630:intron | 40.0% | |
GAAACTAGGATATTGTGCAC+AGG | - | chr2_1:7237584-7237603 | Msa0191630:intron | 40.0% | |
GGGTGATCGAACTAAAAAAG+TGG | - | chr2_1:7237832-7237851 | Msa0191630:intron | 40.0% | |
TCATAAGGGAATACAGACTC+TGG | - | chr2_1:7237880-7237899 | Msa0191630:CDS | 40.0% | |
CATAAGGGAATACAGACTCT+GGG | - | chr2_1:7237881-7237900 | Msa0191630:CDS | 40.0% | |
TATGGAGGAGGAAAATACCT+TGG | + | chr2_1:7237927-7237946 | None:intergenic | 40.0% | |
ACGAAGCTAATATATGGAGG+AGG | + | chr2_1:7237939-7237958 | None:intergenic | 40.0% | |
!! | ATCGGTGGACTAACTTGAAA+GGG | - | chr2_1:7238000-7238019 | Msa0191630:intron | 40.0% |
! | TGTTACAAGAAATGGTGCTG+AGG | + | chr2_1:7238059-7238078 | None:intergenic | 40.0% |
!! | AGGTGAAATTTAGGAGCACT+GGG | + | chr2_1:7238200-7238219 | None:intergenic | 40.0% |
! | AAGGTGAAATTTAGGAGCAC+TGG | + | chr2_1:7238201-7238220 | None:intergenic | 40.0% |
TTGAAGTCTTCAAAGAACGC+TGG | - | chr2_1:7238435-7238454 | Msa0191630:five_prime_UTR | 40.0% | |
CTGGAATCAAGCTATTGCTA+AGG | - | chr2_1:7238454-7238473 | Msa0191630:five_prime_UTR | 40.0% | |
TTTGGGGGATTGCGTATTAT+AGG | + | chr2_1:7238838-7238857 | None:intergenic | 40.0% | |
CCACCAAAATCACTTCATGA+TGG | + | chr2_1:7238922-7238941 | None:intergenic | 40.0% | |
! | CCATCATGAAGTGATTTTGG+TGG | - | chr2_1:7238919-7238938 | Msa0191630:five_prime_UTR | 40.0% |
!! | GAAGTGATTTTGGTGGTACA+TGG | - | chr2_1:7238926-7238945 | Msa0191630:five_prime_UTR | 40.0% |
!! | TTAGGAAAGAGCGTCACGAA+AGG | - | chr2_1:7234000-7234019 | Msa0191630:three_prime_UTR | 45.0% |
!! | TAGGAAAGAGCGTCACGAAA+GGG | - | chr2_1:7234001-7234020 | Msa0191630:three_prime_UTR | 45.0% |
CTGATTGAAACGGTCAGTGA+AGG | - | chr2_1:7234032-7234051 | Msa0191630:three_prime_UTR | 45.0% | |
AGTTCTGTTTCCGTGTTCCT+AGG | - | chr2_1:7234291-7234310 | Msa0191630:intron | 45.0% | |
CGTCGATGAAATCGTTGAGA+TGG | - | chr2_1:7234761-7234780 | Msa0191630:CDS | 45.0% | |
CAGCGGAAGATGAACAAAGA+AGG | + | chr2_1:7235243-7235262 | None:intergenic | 45.0% | |
GGAACTGTTGATGTCGTTAC+AGG | - | chr2_1:7235469-7235488 | Msa0191630:intron | 45.0% | |
GCCTTTCAATTTCTGCGAAG+TGG | + | chr2_1:7235504-7235523 | None:intergenic | 45.0% | |
!! | AACTTGCTGGCAATTCCAGT+CGG | - | chr2_1:7235729-7235748 | Msa0191630:intron | 45.0% |
TGTCAATGCCATGGTGCAAA+AGG | - | chr2_1:7235770-7235789 | Msa0191630:intron | 45.0% | |
CATCCACATTCCCGTCATAA+TGG | + | chr2_1:7235906-7235925 | None:intergenic | 45.0% | |
! | CATTATGACGGGAATGTGGA+TGG | - | chr2_1:7235904-7235923 | Msa0191630:intron | 45.0% |
!! | ATGGATGGTGGAATCTTGAC+TGG | - | chr2_1:7235923-7235942 | Msa0191630:intron | 45.0% |
TCGCTCAGAATCAGACAAAG+TGG | - | chr2_1:7235968-7235987 | Msa0191630:intron | 45.0% | |
GCCTCGGCAATATGTTATAG+AGG | - | chr2_1:7236053-7236072 | Msa0191630:CDS | 45.0% | |
CCCTCTATAACATATTGCCG+AGG | + | chr2_1:7236057-7236076 | None:intergenic | 45.0% | |
CAGAAGAGTCTATGAACGCA+GGG | - | chr2_1:7236595-7236614 | Msa0191630:intron | 45.0% | |
AGAAGAGTCTATGAACGCAG+GGG | - | chr2_1:7236596-7236615 | Msa0191630:intron | 45.0% | |
AGGTGTTCAGATGCAAGTGA+AGG | - | chr2_1:7236626-7236645 | Msa0191630:intron | 45.0% | |
GGTGTTCAGATGCAAGTGAA+GGG | - | chr2_1:7236627-7236646 | Msa0191630:intron | 45.0% | |
ATTCCTCACTTAAGTGGAGC+TGG | - | chr2_1:7236977-7236996 | Msa0191630:intron | 45.0% | |
AATCCAGCTCCACTTAAGTG+AGG | + | chr2_1:7236983-7237002 | None:intergenic | 45.0% | |
CAGTGTAACACAAGGTCATC+CGG | + | chr2_1:7237131-7237150 | None:intergenic | 45.0% | |
GTGTAGGTTTGTGGAAGGTA+TGG | - | chr2_1:7237241-7237260 | Msa0191630:intron | 45.0% | |
ATGCAGATCGAGAGAAAACC+GGG | + | chr2_1:7237268-7237287 | None:intergenic | 45.0% | |
CATGCAGATCGAGAGAAAAC+CGG | + | chr2_1:7237269-7237288 | None:intergenic | 45.0% | |
AGCTGCAACCCTAAATCAAG+TGG | - | chr2_1:7237356-7237375 | Msa0191630:intron | 45.0% | |
TGCAACCCTAAATCAAGTGG+TGG | - | chr2_1:7237359-7237378 | Msa0191630:intron | 45.0% | |
ATCCATGGACAAGGTCATTC+TGG | + | chr2_1:7237551-7237570 | None:intergenic | 45.0% | |
AGAATGACCTTGTCCATGGA+TGG | - | chr2_1:7237550-7237569 | Msa0191630:intron | 45.0% | |
GAATGACCTTGTCCATGGAT+GGG | - | chr2_1:7237551-7237570 | Msa0191630:intron | 45.0% | |
AATGACCTTGTCCATGGATG+GGG | - | chr2_1:7237552-7237571 | Msa0191630:intron | 45.0% | |
TCATATCCATTCCCCATCCA+TGG | + | chr2_1:7237566-7237585 | None:intergenic | 45.0% | |
GTTAACCTGTACTGTGTCAC+TGG | - | chr2_1:7237957-7237976 | Msa0191630:intron | 45.0% | |
AGTTTCCAGTGACACAGTAC+AGG | + | chr2_1:7237965-7237984 | None:intergenic | 45.0% | |
!! | CATCGGTGGACTAACTTGAA+AGG | - | chr2_1:7237999-7238018 | Msa0191630:intron | 45.0% |
!! | GGTTGATAGCAGAAACAAGG+TGG | - | chr2_1:7238245-7238264 | Msa0191630:intron | 45.0% |
! | AACGGTTGATGTTCGATCTG+AGG | - | chr2_1:7238271-7238290 | Msa0191630:intron | 45.0% |
AGATACGAAGACAGTCAACG+TGG | - | chr2_1:7238408-7238427 | Msa0191630:five_prime_UTR | 45.0% | |
GATACGAAGACAGTCAACGT+GGG | - | chr2_1:7238409-7238428 | Msa0191630:five_prime_UTR | 45.0% | |
GTTGGTACGAAGCTAGCAAA+AGG | + | chr2_1:7238594-7238613 | None:intergenic | 45.0% | |
GTGTTTGGTTGGATTCACGT+TGG | + | chr2_1:7238612-7238631 | None:intergenic | 45.0% | |
ACGTGAATCCAACCAAACAC+AGG | - | chr2_1:7238612-7238631 | Msa0191630:five_prime_UTR | 45.0% | |
!!! | TTTATTTTATTTTATTTTTC+TGG | - | chr2_1:7234125-7234144 | Msa0191630:three_prime_UTR | 5.0% |
! | ATGACGGGAATGTGGATGGA+TGG | - | chr2_1:7235908-7235927 | Msa0191630:intron | 50.0% |
TTGGGATGAGGATTTAGGCG+TGG | - | chr2_1:7236277-7236296 | Msa0191630:intron | 50.0% | |
GTTGAATTCGGGTCAAGAGC+TGG | + | chr2_1:7236445-7236464 | None:intergenic | 50.0% | |
GCAGAAGAGTCTATGAACGC+AGG | - | chr2_1:7236594-7236613 | Msa0191630:intron | 50.0% | |
! | ATGAACGCAGGGGAAGTACA+AGG | - | chr2_1:7236606-7236625 | Msa0191630:intron | 50.0% |
AATGGTTACCCAGTGCATGG+CGG | + | chr2_1:7236653-7236672 | None:intergenic | 50.0% | |
AGGAATGGTTACCCAGTGCA+TGG | + | chr2_1:7236656-7236675 | None:intergenic | 50.0% | |
TGCAGATCGAGAGAAAACCG+GGG | + | chr2_1:7237267-7237286 | None:intergenic | 50.0% | |
! | CGGTTTTCTCTCGATCTGCA+TGG | - | chr2_1:7237267-7237286 | Msa0191630:intron | 50.0% |
CTCCAGAATGACCTTGTCCA+TGG | - | chr2_1:7237546-7237565 | Msa0191630:intron | 50.0% | |
GCAGTAAGTCCAAGTTCAGC+TGG | + | chr2_1:7237740-7237759 | None:intergenic | 50.0% | |
AAGGGAATACAGACTCTGGG+TGG | - | chr2_1:7237884-7237903 | Msa0191630:CDS | 50.0% | |
AGGGAATACAGACTCTGGGT+GGG | - | chr2_1:7237885-7237904 | Msa0191630:CDS | 50.0% | |
GCAGAAACAAGGTGGAGCAA+CGG | - | chr2_1:7238253-7238272 | Msa0191630:intron | 50.0% | |
! | CAAGCTAGCCTGTGTTTGGT+TGG | + | chr2_1:7238623-7238642 | None:intergenic | 50.0% |
! | CAACCAAACACAGGCTAGCT+TGG | - | chr2_1:7238621-7238640 | Msa0191630:five_prime_UTR | 50.0% |
! | CAACCAAGCTAGCCTGTGTT+TGG | + | chr2_1:7238627-7238646 | None:intergenic | 50.0% |
ACGGGAATGTGGATGGATGG+TGG | - | chr2_1:7235911-7235930 | Msa0191630:intron | 55.0% | |
! | GTTTGTGGAAGGTATGGCCC+CGG | - | chr2_1:7237247-7237266 | Msa0191630:intron | 55.0% |
CCATTCCCCATCCATGGACA+AGG | + | chr2_1:7237560-7237579 | None:intergenic | 55.0% | |
CCTTGTCCATGGATGGGGAA+TGG | - | chr2_1:7237557-7237576 | Msa0191630:intron | 55.0% | |
ATACAGACTCTGGGTGGGAG+CGG | - | chr2_1:7237890-7237909 | Msa0191630:CDS | 55.0% | |
CTTCCCACCGTGCATTCACA+CGG | - | chr2_1:7238564-7238583 | Msa0191630:five_prime_UTR | 55.0% | |
AGGAGCTCCGTGTGAATGCA+CGG | + | chr2_1:7238574-7238593 | None:intergenic | 55.0% | |
GAGCGGTCATGGTGCAACCA+AGG | - | chr2_1:7237907-7237926 | Msa0191630:exon | 60.0% | |
CGTGTGAATGCACGGTGGGA+AGG | + | chr2_1:7238566-7238585 | None:intergenic | 60.0% | |
GCTCCGTGTGAATGCACGGT+GGG | + | chr2_1:7238570-7238589 | None:intergenic | 60.0% | |
AGCTCCGTGTGAATGCACGG+TGG | + | chr2_1:7238571-7238590 | None:intergenic | 60.0% | |
AGTGAAGGGCCGCCATGCAC+TGG | - | chr2_1:7236641-7236660 | Msa0191630:intron | 65.0% | |
GTGAAGGGCCGCCATGCACT+GGG | - | chr2_1:7236642-7236661 | Msa0191630:intron | 65.0% | |
ACTCTGGGTGGGAGCGGTCA+TGG | - | chr2_1:7237896-7237915 | Msa0191630:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 7233659 | 7239021 | 7233659 | ID=Msa0191630;Name=Msa0191630 |
chr2_1 | mRNA | 7233659 | 7239021 | 7233659 | ID=Msa0191630-mRNA-1;Parent=Msa0191630;Name=Msa0191630-mRNA-1;_AED=0.21;_eAED=0.21;_QI=683|0.93|0.93|1|0.66|0.75|16|486|401 |
chr2_1 | exon | 7233659 | 7234270 | 7233659 | ID=Msa0191630-mRNA-1:exon:3330;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7234388 | 7234423 | 7234388 | ID=Msa0191630-mRNA-1:exon:3329;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7234553 | 7234579 | 7234553 | ID=Msa0191630-mRNA-1:exon:3328;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7234752 | 7234847 | 7234752 | ID=Msa0191630-mRNA-1:exon:3327;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7235075 | 7235128 | 7235075 | ID=Msa0191630-mRNA-1:exon:3326;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7235367 | 7235433 | 7235367 | ID=Msa0191630-mRNA-1:exon:3325;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7236017 | 7236082 | 7236017 | ID=Msa0191630-mRNA-1:exon:3324;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7236165 | 7236281 | 7236165 | ID=Msa0191630-mRNA-1:exon:3323;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7236362 | 7236463 | 7236362 | ID=Msa0191630-mRNA-1:exon:3322;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7236694 | 7236809 | 7236694 | ID=Msa0191630-mRNA-1:exon:3321;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7236889 | 7236972 | 7236889 | ID=Msa0191630-mRNA-1:exon:3320;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7237079 | 7237189 | 7237079 | ID=Msa0191630-mRNA-1:exon:3319;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7237375 | 7237410 | 7237375 | ID=Msa0191630-mRNA-1:exon:3318;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7237634 | 7237741 | 7237634 | ID=Msa0191630-mRNA-1:exon:3317;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7237864 | 7237952 | 7237864 | ID=Msa0191630-mRNA-1:exon:3316;Parent=Msa0191630-mRNA-1 |
chr2_1 | exon | 7238368 | 7239021 | 7238368 | ID=Msa0191630-mRNA-1:exon:3315;Parent=Msa0191630-mRNA-1 |
chr2_1 | five_prime_UTR | 7238368 | 7239021 | 7238368 | ID=Msa0191630-mRNA-1:five_prime_utr;Parent=Msa0191630-mRNA-1 |
chr2_1 | five_prime_UTR | 7237924 | 7237952 | 7237924 | ID=Msa0191630-mRNA-1:five_prime_utr;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7237864 | 7237923 | 7237864 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7237634 | 7237741 | 7237634 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7237375 | 7237410 | 7237375 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7237079 | 7237189 | 7237079 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7236889 | 7236972 | 7236889 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7236694 | 7236809 | 7236694 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7236362 | 7236463 | 7236362 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7236165 | 7236281 | 7236165 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7236017 | 7236082 | 7236017 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7235367 | 7235433 | 7235367 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7235075 | 7235128 | 7235075 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7234752 | 7234847 | 7234752 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7234553 | 7234579 | 7234553 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7234388 | 7234423 | 7234388 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | CDS | 7234145 | 7234270 | 7234145 | ID=Msa0191630-mRNA-1:cds;Parent=Msa0191630-mRNA-1 |
chr2_1 | three_prime_UTR | 7233659 | 7234144 | 7233659 | ID=Msa0191630-mRNA-1:three_prime_utr;Parent=Msa0191630-mRNA-1 |
Gene Sequence |
Protein sequence |