Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538670 | XP_013455198.1 | 98.148 | 378 | 3 | 1 | 1 | 374 | 1 | 378 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538670 | sp|Q3E875|RGAPX_ARATH | 70.106 | 378 | 107 | 2 | 1 | 374 | 1 | 376 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538670 | A0A072UHJ4 | 98.148 | 378 | 3 | 1 | 1 | 374 | 1 | 378 | 0.0 | 761 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032080 | Msa0538670 | 0.873853 | 1.065663e-67 | -8.615850e-47 |
| Msa0032100 | Msa0538670 | 0.834606 | 2.720287e-56 | -8.615850e-47 |
| Msa0046160 | Msa0538670 | 0.802880 | 4.547840e-49 | -8.615850e-47 |
| Msa0079370 | Msa0538670 | 0.846626 | 1.930096e-59 | -8.615850e-47 |
| Msa0079390 | Msa0538670 | 0.801915 | 7.186990e-49 | -8.615850e-47 |
| Msa0124320 | Msa0538670 | 0.800245 | 1.577621e-48 | -8.615850e-47 |
| Msa0138020 | Msa0538670 | 0.828485 | 8.760009e-55 | -8.615850e-47 |
| Msa0172080 | Msa0538670 | 0.834889 | 2.308422e-56 | -8.615850e-47 |
| Msa0186320 | Msa0538670 | 0.800159 | 1.642794e-48 | -8.615850e-47 |
| Msa0189030 | Msa0538670 | 0.810939 | 8.981337e-51 | -8.615850e-47 |
| Msa0196670 | Msa0538670 | 0.801619 | 8.266067e-49 | -8.615850e-47 |
| Msa0200850 | Msa0538670 | 0.836189 | 1.082796e-56 | -8.615850e-47 |
| Msa0206010 | Msa0538670 | 0.808408 | 3.143621e-50 | -8.615850e-47 |
| Msa0218370 | Msa0538670 | 0.856606 | 2.871976e-62 | -8.615850e-47 |
| Msa0236420 | Msa0538670 | 0.809201 | 2.127015e-50 | -8.615850e-47 |
| Msa0386010 | Msa0538670 | 0.805439 | 1.334117e-49 | -8.615850e-47 |
| Msa0417330 | Msa0538670 | 0.815277 | 1.004044e-51 | -8.615850e-47 |
| Msa0422490 | Msa0538670 | 0.818874 | 1.561054e-52 | -8.615850e-47 |
| Msa0432160 | Msa0538670 | 0.800609 | 1.330024e-48 | -8.615850e-47 |
| Msa0434540 | Msa0538670 | 0.811930 | 5.471024e-51 | -8.615850e-47 |
| Msa0455760 | Msa0538670 | 0.820471 | 6.741513e-53 | -8.615850e-47 |
| Msa0476680 | Msa0538670 | 0.801540 | 8.581597e-49 | -8.615850e-47 |
| Msa0243480 | Msa0538670 | 0.854778 | 9.810089e-62 | -8.615850e-47 |
| Msa0270960 | Msa0538670 | 0.817114 | 3.899743e-52 | -8.615850e-47 |
| Msa0271550 | Msa0538670 | 0.822702 | 2.056069e-53 | -8.615850e-47 |
| Msa0281930 | Msa0538670 | 0.843982 | 1.002160e-58 | -8.615850e-47 |
| Msa0287410 | Msa0538670 | 0.801696 | 7.972904e-49 | -8.615850e-47 |
| Msa0287870 | Msa0538670 | 0.811518 | 6.724644e-51 | -8.615850e-47 |
| Msa0309270 | Msa0538670 | 0.804959 | 1.681213e-49 | -8.615850e-47 |
| Msa0319290 | Msa0538670 | 0.811605 | 6.438447e-51 | -8.615850e-47 |
| Msa0321080 | Msa0538670 | 0.832121 | 1.132673e-55 | -8.615850e-47 |
| Msa0326110 | Msa0538670 | 0.807850 | 4.132917e-50 | -8.615850e-47 |
| Msa0363790 | Msa0538670 | 0.829601 | 4.700020e-55 | -8.615850e-47 |
| Msa0507610 | Msa0538670 | 0.803828 | 2.893074e-49 | -8.615850e-47 |
| Msa0521010 | Msa0538670 | 0.800986 | 1.114267e-48 | -8.615850e-47 |
| Msa0538670 | Msa0545050 | 0.809078 | 2.260322e-50 | -8.615850e-47 |
| Msa0538670 | Msa0594560 | 0.802744 | 4.851106e-49 | -8.615850e-47 |
| Msa0538670 | Msa0600590 | 0.804155 | 2.474448e-49 | -8.615850e-47 |
| Msa0538670 | Msa0623070 | 0.801236 | 9.902305e-49 | -8.615850e-47 |
| Msa0538670 | Msa0641130 | 0.811196 | 7.899497e-51 | -8.615850e-47 |
| Msa0538670 | Msa0661720 | 0.800956 | 1.129828e-48 | -8.615850e-47 |
| Msa0538670 | Msa0672760 | 0.943390 | 1.312206e-102 | -8.615850e-47 |
| Msa0538670 | Msa0830230 | 0.809895 | 1.508938e-50 | -8.615850e-47 |
| Msa0538670 | Msa0831850 | 0.809658 | 1.696886e-50 | -8.615850e-47 |
| Msa0538670 | Msa0888260 | 0.808015 | 3.812265e-50 | -8.615850e-47 |
| Msa0538670 | Msa0899970 | 0.804247 | 2.367121e-49 | -8.615850e-47 |
| Msa0538670 | Msa0915610 | 0.807429 | 5.076062e-50 | -8.615850e-47 |
| Msa0538670 | Msa0965080 | 0.807205 | 5.663792e-50 | -8.615850e-47 |
| Msa0538670 | Msa0965290 | 0.814918 | 1.206276e-51 | -8.615850e-47 |
| Msa0538670 | Msa0999680 | 0.819122 | 1.370695e-52 | -8.615850e-47 |
| Msa0538670 | Msa1063400 | 0.808735 | 2.675800e-50 | -8.615850e-47 |
| Msa0538670 | Msa1122150 | 0.858495 | 7.922086e-63 | -8.615850e-47 |
| Msa0538670 | Msa1140630 | 0.806623 | 7.518841e-50 | -8.615850e-47 |
| Msa0538670 | Msa1160560 | 0.875818 | 2.283587e-68 | -8.615850e-47 |
| Msa0538670 | Msa1185620 | 0.802068 | 6.684249e-49 | -8.615850e-47 |
| Msa0538670 | Msa1212050 | 0.805779 | 1.131908e-49 | -8.615850e-47 |
| Msa0538670 | Msa1221330 | 0.801266 | 9.762830e-49 | -8.615850e-47 |
| Msa0538670 | Msa1235390 | 0.804061 | 2.588049e-49 | -8.615850e-47 |
| Msa0538670 | Msa1238330 | 0.804913 | 1.719139e-49 | -8.615850e-47 |
| Msa0538670 | Msa1239620 | 0.815841 | 7.519822e-52 | -8.615850e-47 |
| Msa0538670 | Msa1259860 | 0.800096 | 1.691418e-48 | -8.615850e-47 |
| Msa0538670 | Msa1291450 | 0.820515 | 6.585715e-53 | -8.615850e-47 |
| Msa0538670 | Msa1329200 | 0.802884 | 4.539020e-49 | -8.615850e-47 |
| Msa0538670 | Msa1355180 | 0.821378 | 4.169440e-53 | -8.615850e-47 |
| Msa0538670 | Msa1355890 | 0.816308 | 5.913140e-52 | -8.615850e-47 |
| Msa0538670 | Msa1390020 | 0.950379 | 1.861577e-108 | -8.615850e-47 |
| Msa0538670 | Msa1419840 | 0.828306 | 9.675223e-55 | -8.615850e-47 |
| Msa0538670 | Msa1442920 | 0.810978 | 8.808165e-51 | -8.615850e-47 |
| Msa0538670 | Msa1458680 | 0.806353 | 8.570448e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538670 | MtrunA17_Chr4g0013351 | 98.148 | 378 | 3 | 1 | 1 | 374 | 1 | 378 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0538670 | AT5G61530.1 | 70.106 | 378 | 107 | 2 | 1 | 374 | 1 | 376 | 0.0 | 543 |
| Msa0538670 | AT5G61530.5 | 67.989 | 378 | 106 | 3 | 1 | 374 | 1 | 367 | 0.0 | 520 |
| Msa0538670 | AT5G61530.2 | 67.989 | 378 | 106 | 3 | 1 | 374 | 1 | 367 | 0.0 | 520 |
| Msa0538670 | AT5G61530.3 | 69.832 | 358 | 102 | 2 | 21 | 374 | 21 | 376 | 0.0 | 508 |
| Msa0538670 | AT5G61530.4 | 71.841 | 277 | 74 | 1 | 1 | 273 | 1 | 277 | 3.06e-144 | 410 |
Find 115 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTGGATATATTGGATT+TGG | 0.230100 | 4_1:-18145690 | Msa0538670:three_prime_UTR |
| TCGAAATACCTTGGTTGTAT+AGG | 0.242849 | 4_1:+18148918 | None:intergenic |
| GCAGATTACCTTATAGTTTC+AGG | 0.250957 | 4_1:-18149117 | Msa0538670:intron |
| CAGTATTGACGATAAATTTC+AGG | 0.256557 | 4_1:+18146933 | None:intergenic |
| CAAATCCAATATATCCAAAT+TGG | 0.269962 | 4_1:+18145691 | None:intergenic |
| TGCATCTTCTCTTATTCCTT+TGG | 0.272162 | 4_1:-18145884 | Msa0538670:CDS |
| CGAAATACCTTGGTTGTATA+GGG | 0.288605 | 4_1:+18148919 | None:intergenic |
| TTGTGGTGTGATATTGTTCT+TGG | 0.305059 | 4_1:-18145451 | Msa0538670:three_prime_UTR |
| GATATACCTTTCACTAAAAC+TGG | 0.308224 | 4_1:+18145588 | None:intergenic |
| TAAATCTGAAGGGGACAAAA+AGG | 0.312157 | 4_1:-18148960 | Msa0538670:CDS |
| CAAGTAGTTGAACCAGGTTC+TGG | 0.316941 | 4_1:+18146870 | None:intergenic |
| AAGAAGAGTTTAGAGAGATA+TGG | 0.324615 | 4_1:+18151443 | None:intergenic |
| ATTCTTTGACTTGGATGTAT+TGG | 0.329262 | 4_1:-18145731 | Msa0538670:three_prime_UTR |
| TCAGAAGTCACTTCTCAATA+AGG | 0.338907 | 4_1:-18148594 | Msa0538670:intron |
| TGACTTGGATGTATTGGATT+TGG | 0.341216 | 4_1:-18145725 | Msa0538670:three_prime_UTR |
| CTGAAATTTATCGTCAATAC+TGG | 0.352388 | 4_1:-18146932 | Msa0538670:CDS |
| AAAAGCTACCTGAAACTATA+AGG | 0.355497 | 4_1:+18149109 | None:intergenic |
| ACAAGAGCTGCTACATCAAC+TGG | 0.363894 | 4_1:+18148785 | None:intergenic |
| GAGAGATATGGATTGAGAAT+AGG | 0.364756 | 4_1:+18151455 | None:intergenic |
| TCCAATGTGGTCAGTGGCTC+AGG | 0.371441 | 4_1:+18148740 | None:intergenic |
| CAGAACCTGGTTCAACTACT+TGG | 0.372001 | 4_1:-18146869 | Msa0538670:CDS |
| TCAACTGGATTTGAGCCTTC+TGG | 0.372040 | 4_1:+18148800 | None:intergenic |
| TTCTGGATTCAAGCTCTGTT+TGG | 0.372743 | 4_1:+18146887 | None:intergenic |
| CCTTTATTGATTCTTTGACT+TGG | 0.375766 | 4_1:-18145740 | Msa0538670:three_prime_UTR |
| CCACATTACCTCTTCAACCT+TGG | 0.389178 | 4_1:+18149795 | None:intergenic |
| AGCTGAAGTGGCGGGAAAGT+TGG | 0.405461 | 4_1:-18149967 | Msa0538670:CDS |
| TCTCTTATTCCTTTGGATGA+AGG | 0.409750 | 4_1:-18145877 | Msa0538670:CDS |
| ACCTGTTATCATGTGGCAAA+AGG | 0.410592 | 4_1:-18146964 | Msa0538670:CDS |
| TTGACTAGTATCTGAGGAAT+AGG | 0.414328 | 4_1:+18149144 | None:intergenic |
| GACAAAAGAGAAGGTGGTTG+TGG | 0.420557 | 4_1:-18149824 | Msa0538670:CDS |
| CCATGAGAAACATACTTAAG+AGG | 0.422179 | 4_1:-18148676 | Msa0538670:CDS |
| CCAAGTCAAAGAATCAATAA+AGG | 0.427250 | 4_1:+18145740 | None:intergenic |
| GCTGAAGTGGCGGGAAAGTT+GGG | 0.434506 | 4_1:-18149966 | Msa0538670:CDS |
| TATAGCAGCTATGTTTATGC+TGG | 0.434797 | 4_1:-18145632 | Msa0538670:three_prime_UTR |
| GAATCAGCGGGAACATTTGT+TGG | 0.435767 | 4_1:-18150020 | Msa0538670:CDS |
| ACTTTGTTCAGATGGATTCT+CGG | 0.437283 | 4_1:-18147007 | Msa0538670:intron |
| TTCCTGAGGAGAGGTTTGTC+AGG | 0.437700 | 4_1:-18149847 | Msa0538670:CDS |
| ACAAAAGAGAAGGTGGTTGT+GGG | 0.439320 | 4_1:-18149823 | Msa0538670:CDS |
| TCGATTGCACCGAAGTCAAC+TGG | 0.452453 | 4_1:+18145850 | None:intergenic |
| TCATGATTGCATATATTTGA+AGG | 0.453322 | 4_1:-18145387 | Msa0538670:three_prime_UTR |
| CCTCTTAAGTATGTTTCTCA+TGG | 0.456228 | 4_1:+18148676 | None:intergenic |
| TCGGAGCCTTGCAATGGAAA+TGG | 0.458451 | 4_1:-18146988 | Msa0538670:CDS |
| CTCTGTACAGTAATCTCAAT+CGG | 0.472832 | 4_1:+18149183 | None:intergenic |
| AATGATCGTCACGTCCAGAT+TGG | 0.476710 | 4_1:+18145656 | None:intergenic |
| TGTACAGGATCGAATGATAT+CGG | 0.477600 | 4_1:-18149890 | Msa0538670:CDS |
| TGGGGAAACATGTTGGGTAC+TGG | 0.483946 | 4_1:-18145612 | Msa0538670:three_prime_UTR |
| GTTTCTCATGGAATATATGT+TGG | 0.487803 | 4_1:+18148688 | None:intergenic |
| TGGTGTGATATTGTTCTTGG+TGG | 0.489406 | 4_1:-18145448 | Msa0538670:three_prime_UTR |
| CAGATGCCAACGAGACAGTC+TGG | 0.491595 | 4_1:-18145786 | Msa0538670:CDS |
| CTCACCTCAGTGGCAAGATA+AGG | 0.494138 | 4_1:-18150177 | Msa0538670:CDS |
| ATAGCAGCTATGTTTATGCT+GGG | 0.496784 | 4_1:-18145631 | Msa0538670:three_prime_UTR |
| CTATACCTTGTTCGAATCAG+TGG | 0.504221 | 4_1:+18151382 | None:intergenic |
| CCTGTTATCATGTGGCAAAA+GGG | 0.504737 | 4_1:-18146963 | Msa0538670:CDS |
| AGACATTGAAAGATGGCAAA+AGG | 0.507271 | 4_1:-18149584 | Msa0538670:intron |
| GGATTCAAGCTCTGTTTGGA+AGG | 0.507953 | 4_1:+18146891 | None:intergenic |
| TCCCTGACAAACCTCTCCTC+AGG | 0.510117 | 4_1:+18149845 | None:intergenic |
| GTCTACAAGACATGCTGTAC+AGG | 0.511268 | 4_1:-18149905 | Msa0538670:CDS |
| ATATCGGCTGCTGCTACGAC+TGG | 0.522526 | 4_1:-18149874 | Msa0538670:CDS |
| GGTCAAGCTTAAAGAAGCTA+AGG | 0.542829 | 4_1:-18150042 | Msa0538670:CDS |
| TCATTTCCAGACTGTCTCGT+TGG | 0.544319 | 4_1:+18145780 | None:intergenic |
| TTATGCTGGGGAAACATGTT+GGG | 0.545272 | 4_1:-18145618 | Msa0538670:three_prime_UTR |
| AAGTAACAACAAAATTATAA+CGG | 0.546617 | 4_1:+18151508 | None:intergenic |
| CAGCGTGAACTATATGACTC+TGG | 0.554197 | 4_1:-18148648 | Msa0538670:CDS |
| CAGAGCTTGAATCCAGAACC+TGG | 0.554738 | 4_1:-18146882 | Msa0538670:CDS |
| AATAAGAGAAGATGCATCCA+TGG | 0.561442 | 4_1:+18145891 | None:intergenic |
| ACTACTTGGGACATGCTCGC+TGG | 0.561653 | 4_1:-18146855 | Msa0538670:intron |
| AGCGGGAACATTTGTTGGCG+AGG | 0.563323 | 4_1:-18150015 | Msa0538670:CDS |
| GAGCTTTATAATGAGATCAA+AGG | 0.565606 | 4_1:-18148719 | Msa0538670:CDS |
| AAAGAGTAATGTAGCTGAAG+TGG | 0.566162 | 4_1:-18149979 | Msa0538670:CDS |
| TTTATGCTGGGGAAACATGT+TGG | 0.566531 | 4_1:-18145619 | Msa0538670:three_prime_UTR |
| TCAACTGCTGCAGTGCCAGA+AGG | 0.567311 | 4_1:-18148815 | Msa0538670:CDS |
| CAAAAGAGAAGGTGGTTGTG+GGG | 0.567728 | 4_1:-18149822 | Msa0538670:CDS |
| CAGGTGCCATTTCCATTGCA+AGG | 0.570190 | 4_1:+18146982 | None:intergenic |
| AAAGAAGCTAAGGAATCAGC+GGG | 0.570777 | 4_1:-18150032 | Msa0538670:CDS |
| ACTGGCATGCCTTCATCCAA+AGG | 0.571508 | 4_1:+18145868 | None:intergenic |
| TCCTGAGCCACTGACCACAT+TGG | 0.580818 | 4_1:-18148741 | Msa0538670:CDS |
| GGATTCTCGGAGCCTTGCAA+TGG | 0.586088 | 4_1:-18146994 | Msa0538670:CDS |
| CAGGGAGTTGCTAAAACTGA+CGG | 0.591352 | 4_1:-18149476 | Msa0538670:intron |
| AGAACCTGGTTCAACTACTT+GGG | 0.591658 | 4_1:-18146868 | Msa0538670:CDS |
| AGTAATGTAGCTGAAGTGGC+GGG | 0.592358 | 4_1:-18149975 | Msa0538670:CDS |
| GAAGGCATGCCAGTTGACTT+CGG | 0.597065 | 4_1:-18145859 | Msa0538670:CDS |
| TCCTGAGGAGAGGTTTGTCA+GGG | 0.599140 | 4_1:-18149846 | Msa0538670:CDS |
| CACTGAGGTGAGATTACAGA+AGG | 0.600335 | 4_1:+18150188 | None:intergenic |
| TCTTGACAGACATTGAAAGA+TGG | 0.604203 | 4_1:-18149591 | Msa0538670:CDS |
| GTCAGGGACAAAAGAGAAGG+TGG | 0.606025 | 4_1:-18149830 | Msa0538670:CDS |
| TTAGTGATGAGAGTTTCTGC+AGG | 0.619157 | 4_1:+18145484 | None:intergenic |
| CTACGACTGGTGCATTCCTG+AGG | 0.619975 | 4_1:-18149861 | Msa0538670:CDS |
| ACCTTCCACTGATTCGAACA+AGG | 0.621096 | 4_1:-18151387 | Msa0538670:intron |
| GGTGGTTGTGGGGAAATCCA+AGG | 0.621706 | 4_1:-18149812 | Msa0538670:CDS |
| TAAAGCTCCAATGTGGTCAG+TGG | 0.623875 | 4_1:+18148734 | None:intergenic |
| GACGGTATTCAAAAGTCGGT+GGG | 0.626060 | 4_1:-18149944 | Msa0538670:intron |
| GAGTAATGTAGCTGAAGTGG+CGG | 0.626295 | 4_1:-18149976 | Msa0538670:CDS |
| ATGTCCCAAGTAGTTGAACC+AGG | 0.630070 | 4_1:+18146864 | None:intergenic |
| GGGGAAATCCAAGGTTGAAG+AGG | 0.631245 | 4_1:-18149803 | Msa0538670:intron |
| GCACAATTGACTAGTATCTG+AGG | 0.633991 | 4_1:+18149138 | None:intergenic |
| ACCTTGTTCGAATCAGTGGA+AGG | 0.635934 | 4_1:+18151386 | None:intergenic |
| ACTGGTGCATTCCTGAGGAG+AGG | 0.636539 | 4_1:-18149856 | Msa0538670:CDS |
| TGCAGACGAGAGTGAAGCCA+TGG | 0.637614 | 4_1:-18145908 | Msa0538670:intron |
| TGTACAGCATGTCTTGTAGA+CGG | 0.639114 | 4_1:+18149907 | None:intergenic |
| CAGAGTCATATAGTTCACGC+TGG | 0.642929 | 4_1:+18148649 | None:intergenic |
| TTTGTCAGGGACAAAAGAGA+AGG | 0.643608 | 4_1:-18149833 | Msa0538670:CDS |
| ATGTGGTCAGTGGCTCAGGA+AGG | 0.645915 | 4_1:+18148744 | None:intergenic |
| ATTTGTTGGCGAGGTCACAA+AGG | 0.648129 | 4_1:-18150006 | Msa0538670:CDS |
| TAAAGAAGCTAAGGAATCAG+CGG | 0.649713 | 4_1:-18150033 | Msa0538670:CDS |
| AAGTGGCGGGAAAGTTGGGA+CGG | 0.654703 | 4_1:-18149962 | Msa0538670:intron |
| CTCGCCTTATCTTGCCACTG+AGG | 0.661591 | 4_1:+18150173 | None:intergenic |
| TAGCAGCTATGTTTATGCTG+GGG | 0.665487 | 4_1:-18145630 | Msa0538670:three_prime_UTR |
| CGATTGAGATTACTGTACAG+AGG | 0.667858 | 4_1:-18149182 | Msa0538670:CDS |
| CAGTGGCAAGATAAGGCGAG+TGG | 0.672268 | 4_1:-18150170 | Msa0538670:CDS |
| ACTAGCACGGAGCAAAAGTG+CGG | 0.688718 | 4_1:+18148616 | None:intergenic |
| GAAGTGACTTCTGACTAGCA+CGG | 0.698389 | 4_1:+18148603 | None:intergenic |
| CTCATTATAAAGCTCCAATG+TGG | 0.698623 | 4_1:+18148727 | None:intergenic |
| TTGGTTGCCCTATACAACCA+AGG | 0.705842 | 4_1:-18148926 | Msa0538670:intron |
| CTTCTGTAATCTCACCTCAG+TGG | 0.711148 | 4_1:-18150187 | Msa0538670:CDS |
| AAATGGCACCTGTTATCATG+TGG | 0.743338 | 4_1:-18146971 | Msa0538670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATAGTTTTTTTTTTTTAT+CGG | - | chr4_1:18145544-18145563 | Msa0538670:three_prime_UTR | 10.0% |
| !! | ATTAAATAGTTTATTTGATA+AGG | - | chr4_1:18146323-18146342 | Msa0538670:intron | 10.0% |
| !!! | TTTTAAATCCTTTTATTTTA+CGG | - | chr4_1:18146524-18146543 | Msa0538670:intron | 10.0% |
| !!! | TATATATAATTTTAATGTAG+GGG | - | chr4_1:18146846-18146865 | Msa0538670:intron | 10.0% |
| !! | TACTATTTAATAAATTTGTA+TGG | - | chr4_1:18148419-18148438 | Msa0538670:intron | 10.0% |
| !!! | CTATAATTTTATTTCTATAT+TGG | - | chr4_1:18150224-18150243 | Msa0538670:five_prime_UTR | 10.0% |
| !! | AATTATAAAAATTCAAAAGA+GGG | - | chr4_1:18150528-18150547 | Msa0538670:intron | 10.0% |
| !!! | TCTTTTAAGATTTTATTTTT+TGG | - | chr4_1:18151356-18151375 | Msa0538670:intron | 10.0% |
| !!! | CTTTTAAGATTTTATTTTTT+GGG | - | chr4_1:18151357-18151376 | Msa0538670:intron | 10.0% |
| !!! | TTTTAAGATTTTATTTTTTG+GGG | - | chr4_1:18151358-18151377 | Msa0538670:intron | 10.0% |
| !! | AAGTAACAACAAAATTATAA+CGG | + | chr4_1:18145404-18145423 | None:intergenic | 15.0% |
| !!! | TATTGATTAATTAGAGATTA+TGG | - | chr4_1:18145798-18145817 | Msa0538670:CDS | 15.0% |
| !! | TATAAAATCCGTAAAATAAA+AGG | + | chr4_1:18146535-18146554 | None:intergenic | 15.0% |
| !! | ATTATATCATTAAAGTTAGA+CGG | - | chr4_1:18148036-18148055 | Msa0538670:intron | 15.0% |
| !! | TATTTAATAAATTTGTATGG+TGG | - | chr4_1:18148422-18148441 | Msa0538670:intron | 15.0% |
| !!! | AGTAATTAATTTTTTTTGGT+TGG | - | chr4_1:18148506-18148525 | Msa0538670:intron | 15.0% |
| !! | AATCAAACAACAAAATAATA+AGG | + | chr4_1:18149017-18149036 | None:intergenic | 15.0% |
| !! | AACTATAAAAGAAACTATTA+AGG | - | chr4_1:18149367-18149386 | Msa0538670:intron | 15.0% |
| !! | TTACATAAAATTCATTATGT+AGG | - | chr4_1:18150108-18150127 | Msa0538670:intron | 15.0% |
| !! | CAATTATAAAAATTCAAAAG+AGG | - | chr4_1:18150527-18150546 | Msa0538670:intron | 15.0% |
| !! | AAACAAGAAAATAAGATATA+TGG | + | chr4_1:18150975-18150994 | None:intergenic | 15.0% |
| !!! | TTCACGTAGAATATTTTTTA+TGG | - | chr4_1:18145659-18145678 | Msa0538670:three_prime_UTR | 20.0% |
| !!! | TAGAATATTTTTTATGGTCA+AGG | - | chr4_1:18145665-18145684 | Msa0538670:three_prime_UTR | 20.0% |
| !! | TTAGTTATCAATTATCATGA+AGG | + | chr4_1:18145775-18145794 | None:intergenic | 20.0% |
| !! | AAATATAATTAGTGCTAACT+TGG | + | chr4_1:18147190-18147209 | None:intergenic | 20.0% |
| !!! | CATTTTTTCTTTGTTTTAGT+TGG | - | chr4_1:18147240-18147259 | Msa0538670:intron | 20.0% |
| !!! | TTTTTTAGAATGATCTATAC+TGG | + | chr4_1:18147387-18147406 | None:intergenic | 20.0% |
| !!! | CATATCTTTTTAAATCTGAA+GGG | - | chr4_1:18147939-18147958 | Msa0538670:intron | 20.0% |
| !!! | ATATCTTTTTAAATCTGAAG+GGG | - | chr4_1:18147940-18147959 | Msa0538670:intron | 20.0% |
| !!! | TAATTACTTAATTGCGTTTT+AGG | + | chr4_1:18148494-18148513 | None:intergenic | 20.0% |
| !!! | ATTCAATTTACTTTTGACAT+GGG | + | chr4_1:18148546-18148565 | None:intergenic | 20.0% |
| !!! | TATGCATTTCTTTTTTTGTT+TGG | - | chr4_1:18148567-18148586 | Msa0538670:intron | 20.0% |
| !!! | TTGATTTGTTTTCATATGTT+AGG | - | chr4_1:18148633-18148652 | Msa0538670:CDS | 20.0% |
| !! | TTTAACAAAATTGGATTTGA+CGG | - | chr4_1:18148663-18148682 | Msa0538670:CDS | 20.0% |
| !! | AGAAAATTAAGTCTACAAAA+CGG | + | chr4_1:18148703-18148722 | None:intergenic | 20.0% |
| !!! | TTTTTCAAATGTTTTACAAG+TGG | + | chr4_1:18149075-18149094 | None:intergenic | 20.0% |
| !!! | TCTTATACTATTTGAAATGT+AGG | - | chr4_1:18149097-18149116 | Msa0538670:intron | 20.0% |
| !!! | CTTATACTATTTGAAATGTA+GGG | - | chr4_1:18149098-18149117 | Msa0538670:intron | 20.0% |
| !!! | GTTTCTTTTATAGTTTTTCT+AGG | + | chr4_1:18149362-18149381 | None:intergenic | 20.0% |
| !! | ACTTTCTTCTAAATTTCTAA+TGG | - | chr4_1:18149542-18149561 | Msa0538670:intron | 20.0% |
| !!! | ATTTTGTTTTAACTTCTTGA+AGG | - | chr4_1:18149623-18149642 | Msa0538670:CDS | 20.0% |
| !! | ATGTAAATAATCACATGTTT+AGG | + | chr4_1:18150094-18150113 | None:intergenic | 20.0% |
| !! | ATTCTAAGTCATAATATATG+AGG | - | chr4_1:18150155-18150174 | Msa0538670:CDS | 20.0% |
| !! | AAGATTATTGCATATCATTA+TGG | + | chr4_1:18150195-18150214 | None:intergenic | 20.0% |
| !!! | AAAAGTCTATTTTCATTACT+TGG | + | chr4_1:18150436-18150455 | None:intergenic | 20.0% |
| !! | TAGTCAATATAGAAATATTC+AGG | - | chr4_1:18150683-18150702 | Msa0538670:intron | 20.0% |
| !! | TAAAGTGCAATTGAAATATT+TGG | - | chr4_1:18150715-18150734 | Msa0538670:intron | 20.0% |
| !!! | AAAGGTATATCTTCTTTTTT+AGG | - | chr4_1:18151333-18151352 | Msa0538670:intron | 20.0% |
| ! | TTATTTGATAAGGACCTTAA+TGG | - | chr4_1:18146333-18146352 | Msa0538670:intron | 25.0% |
| !!! | TAAGGGTATTTTGAAATTCA+TGG | + | chr4_1:18146433-18146452 | None:intergenic | 25.0% |
| ! | AAAATACCCTTACAAAAGTT+GGG | - | chr4_1:18146441-18146460 | Msa0538670:intron | 25.0% |
| ! | TAACTACTTCACTTCTATAT+AGG | - | chr4_1:18146639-18146658 | Msa0538670:intron | 25.0% |
| !! | ATAAACAAACAAAGAGCATA+CGG | + | chr4_1:18146829-18146848 | None:intergenic | 25.0% |
| !!! | TATTTCCCTTTTTTTTTTGC+AGG | - | chr4_1:18147414-18147433 | Msa0538670:intron | 25.0% |
| !!! | ATTTCCCTTTTTTTTTTGCA+GGG | - | chr4_1:18147415-18147434 | Msa0538670:intron | 25.0% |
| ! | ACAAGTGAGTATTTATTTGA+CGG | - | chr4_1:18147481-18147500 | Msa0538670:intron | 25.0% |
| ! | AGTATTTATTTGACGGAAAT+GGG | - | chr4_1:18147488-18147507 | Msa0538670:intron | 25.0% |
| ! | CCTTCAGATTTAAAAAGATA+TGG | + | chr4_1:18147941-18147960 | None:intergenic | 25.0% |
| !! | CCATATCTTTTTAAATCTGA+AGG | - | chr4_1:18147938-18147957 | Msa0538670:intron | 25.0% |
| ! | AAAGAATAATCGAAATACCT+TGG | + | chr4_1:18148003-18148022 | None:intergenic | 25.0% |
| !!! | GATTCAATTTACTTTTGACA+TGG | + | chr4_1:18148547-18148566 | None:intergenic | 25.0% |
| ! | GGTCATGTATTTAACAAAAT+TGG | - | chr4_1:18148654-18148673 | Msa0538670:CDS | 25.0% |
| !!! | ATGTTGTTTTCTCTAATTTG+AGG | - | chr4_1:18148751-18148770 | Msa0538670:CDS | 25.0% |
| !!! | TGTTGTTTTCTCTAATTTGA+GGG | - | chr4_1:18148752-18148771 | Msa0538670:CDS | 25.0% |
| ! | TATGAAGTCATACATATGAT+TGG | - | chr4_1:18149145-18149164 | Msa0538670:CDS | 25.0% |
| ! | AAATGACAACATTAGAGAAT+TGG | - | chr4_1:18149200-18149219 | Msa0538670:intron | 25.0% |
| ! | AATGACAACATTAGAGAATT+GGG | - | chr4_1:18149201-18149220 | Msa0538670:intron | 25.0% |
| !! | TATACCATCTTTTCTACTAT+AGG | + | chr4_1:18149233-18149252 | None:intergenic | 25.0% |
| !! | TGGTTTTTAATAGAACACTA+TGG | - | chr4_1:18149420-18149439 | Msa0538670:intron | 25.0% |
| ! | GAAGAAAGTCTAAATAAACT+AGG | + | chr4_1:18149531-18149550 | None:intergenic | 25.0% |
| !!! | AATTTCTAATGGTCTTATTG+TGG | - | chr4_1:18149553-18149572 | Msa0538670:intron | 25.0% |
| !!! | ATTTCTAATGGTCTTATTGT+GGG | - | chr4_1:18149554-18149573 | Msa0538670:intron | 25.0% |
| ! | CAAAAGTTTGATTGTTCTTA+AGG | + | chr4_1:18149826-18149845 | None:intergenic | 25.0% |
| ! | ATTTCTATATTGGCAATTTG+AGG | - | chr4_1:18150234-18150253 | Msa0538670:five_prime_UTR | 25.0% |
| !! | TAAATCCTTTTAGACAACTT+TGG | + | chr4_1:18150568-18150587 | None:intergenic | 25.0% |
| ! | CTTCTATAATTAACTGATGT+TGG | - | chr4_1:18150748-18150767 | Msa0538670:intron | 25.0% |
| ! | ACTCTAATCACAAAATATTC+TGG | - | chr4_1:18150858-18150877 | Msa0538670:intron | 25.0% |
| !! | AAAAAAGTTAGTTTAACTGC+TGG | - | chr4_1:18150888-18150907 | Msa0538670:intron | 25.0% |
| !! | TGGAATAATGTTTTCCAATT+TGG | - | chr4_1:18151204-18151223 | Msa0538670:intron | 25.0% |
| !! | GTTTTCCAATTTGGATATAT+TGG | - | chr4_1:18151213-18151232 | Msa0538670:intron | 25.0% |
| ! | CAAATCCAATATATCCAAAT+TGG | + | chr4_1:18151221-18151240 | None:intergenic | 25.0% |
| ! | CAATTTGGATATATTGGATT+TGG | - | chr4_1:18151219-18151238 | Msa0538670:intron | 25.0% |
| !! | TCACTAATGTACTTTTATTG+TGG | - | chr4_1:18151441-18151460 | Msa0538670:five_prime_UTR | 25.0% |
| ! | TCATGATTGCATATATTTGA+AGG | - | chr4_1:18151522-18151541 | Msa0538670:five_prime_UTR | 25.0% |
| AAGAAGAGTTTAGAGAGATA+TGG | + | chr4_1:18145469-18145488 | None:intergenic | 30.0% | |
| !! | CTTATTTCTGTTAATTCTCC+AGG | - | chr4_1:18145918-18145937 | Msa0538670:intron | 30.0% |
| !! | CAACTTAATTTGCAGCTTAT+AGG | + | chr4_1:18146042-18146061 | None:intergenic | 30.0% |
| ! | TTAAGTTGTTTATCCAAACG+TGG | - | chr4_1:18146054-18146073 | Msa0538670:intron | 30.0% |
| TCGCATAATTCAATCAAACA+AGG | + | chr4_1:18146081-18146100 | None:intergenic | 30.0% | |
| AATTATGCGAGCTTATCTAT+AGG | - | chr4_1:18146091-18146110 | Msa0538670:intron | 30.0% | |
| !! | CTTATTTTCATAAGCTCTTC+AGG | - | chr4_1:18146177-18146196 | Msa0538670:intron | 30.0% |
| TTACACAGACAGTGTATTAT+TGG | + | chr4_1:18146359-18146378 | None:intergenic | 30.0% | |
| AAAAAATGGTGGTCTCTTAT+TGG | + | chr4_1:18146401-18146420 | None:intergenic | 30.0% | |
| !!! | GGTATTTTGAAATTCATGGT+AGG | + | chr4_1:18146429-18146448 | None:intergenic | 30.0% |
| CAAAATACCCTTACAAAAGT+TGG | - | chr4_1:18146440-18146459 | Msa0538670:intron | 30.0% | |
| ! | GGATTTTCATTAGATGTTAC+TGG | - | chr4_1:18146481-18146500 | Msa0538670:intron | 30.0% |
| TTGTTTAAGTGAATGCATGA+TGG | - | chr4_1:18146564-18146583 | Msa0538670:intron | 30.0% | |
| ! | TTGACTAACTTGTCTTTGAT+GGG | - | chr4_1:18146614-18146633 | Msa0538670:intron | 30.0% |
| TTACAAAAACAACTTGACGA+CGG | + | chr4_1:18146683-18146702 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTGTAAGTAGCTTC+TGG | - | chr4_1:18146691-18146710 | Msa0538670:intron | 30.0% |
| !! | TGTTTTTGTAAGTAGCTTCT+GGG | - | chr4_1:18146692-18146711 | Msa0538670:intron | 30.0% |
| ATACGGTAGTAAACAAGAAA+AGG | + | chr4_1:18146812-18146831 | None:intergenic | 30.0% | |
| ! | GTGGTTGTGTAAATGATTTT+TGG | - | chr4_1:18147133-18147152 | Msa0538670:intron | 30.0% |
| GTCTCATTATCATTTGTTTC+AGG | - | chr4_1:18147262-18147281 | Msa0538670:intron | 30.0% | |
| TCATTATCATTTGTTTCAGG+TGG | - | chr4_1:18147265-18147284 | Msa0538670:intron | 30.0% | |
| AACTCCCTGCAAAAAAAAAA+GGG | + | chr4_1:18147422-18147441 | None:intergenic | 30.0% | |
| TACTCACTTGTTCAATTATG+TGG | + | chr4_1:18147472-18147491 | None:intergenic | 30.0% | |
| GAGTATTTATTTGACGGAAA+TGG | - | chr4_1:18147487-18147506 | Msa0538670:intron | 30.0% | |
| ACATAGATAACAAAAGACTC+TGG | + | chr4_1:18147533-18147552 | None:intergenic | 30.0% | |
| AAAAGCTACCTGAAACTATA+AGG | + | chr4_1:18147803-18147822 | None:intergenic | 30.0% | |
| !!! | AGGTAGCTTTTTTTAGAGTA+AGG | - | chr4_1:18147812-18147831 | Msa0538670:intron | 30.0% |
| AAGAAACATAGACTGATACA+TGG | + | chr4_1:18147846-18147865 | None:intergenic | 30.0% | |
| CCTACATATAATTACAACTG+TGG | + | chr4_1:18147908-18147927 | None:intergenic | 30.0% | |
| CCACAGTTGTAATTATATGT+AGG | - | chr4_1:18147905-18147924 | Msa0538670:intron | 30.0% | |
| GGTATTTCGATTATTCTTTC+AGG | - | chr4_1:18148004-18148023 | Msa0538670:intron | 30.0% | |
| ! | GAGCTTTATAATGAGATCAA+AGG | - | chr4_1:18148190-18148209 | Msa0538670:intron | 30.0% |
| GTTTCTCATGGAATATATGT+TGG | + | chr4_1:18148224-18148243 | None:intergenic | 30.0% | |
| AGTGAGTGTGAATAATTGTT+TGG | - | chr4_1:18148353-18148372 | Msa0538670:intron | 30.0% | |
| ! | AATAATTGTTTGGTGGAAGT+GGG | - | chr4_1:18148363-18148382 | Msa0538670:intron | 30.0% |
| !!! | ATTTGTATGGTGGATTCTTT+TGG | - | chr4_1:18148432-18148451 | Msa0538670:intron | 30.0% |
| ATAAGAGAGTGAAGAGATTT+GGG | + | chr4_1:18148458-18148477 | None:intergenic | 30.0% | |
| TATAAGAGAGTGAAGAGATT+TGG | + | chr4_1:18148459-18148478 | None:intergenic | 30.0% | |
| !!! | ACTTAATTGCGTTTTAGGAA+AGG | + | chr4_1:18148489-18148508 | None:intergenic | 30.0% |
| AAAGAAATGAGCAATTCAGA+TGG | + | chr4_1:18148605-18148624 | None:intergenic | 30.0% | |
| AAAATTGGATTTGACGGTTA+TGG | - | chr4_1:18148669-18148688 | Msa0538670:CDS | 30.0% | |
| !! | GTTGTTTTCTCTAATTTGAG+GGG | - | chr4_1:18148753-18148772 | Msa0538670:CDS | 30.0% |
| AACCTCTTGTGTAAAAAACA+AGG | - | chr4_1:18148844-18148863 | Msa0538670:intron | 30.0% | |
| !!! | TACCTTGTTTTTTACACAAG+AGG | + | chr4_1:18148849-18148868 | None:intergenic | 30.0% |
| CTTGTGTAAAAAACAAGGTA+CGG | - | chr4_1:18148849-18148868 | Msa0538670:intron | 30.0% | |
| GAATGTTGTGAAGAATATGA+AGG | + | chr4_1:18148974-18148993 | None:intergenic | 30.0% | |
| GTTTGATTAGAGACTTGAAA+CGG | - | chr4_1:18149029-18149048 | Msa0538670:intron | 30.0% | |
| ATGACAACATTAGAGAATTG+GGG | - | chr4_1:18149202-18149221 | Msa0538670:intron | 30.0% | |
| AGAACCTATAGTAGAAAAGA+TGG | - | chr4_1:18149226-18149245 | Msa0538670:intron | 30.0% | |
| GACCTATGAATTATGTAGTA+AGG | - | chr4_1:18149288-18149307 | Msa0538670:intron | 30.0% | |
| CTCCTTACTACATAATTCAT+AGG | + | chr4_1:18149293-18149312 | None:intergenic | 30.0% | |
| ! | TGGGTTTTCATTGTTTGATT+TGG | - | chr4_1:18149573-18149592 | Msa0538670:intron | 30.0% |
| !! | GGGTTTTCATTGTTTGATTT+GGG | - | chr4_1:18149574-18149593 | Msa0538670:intron | 30.0% |
| GAGAGAAAAAGACTAATAGA+AGG | + | chr4_1:18149677-18149696 | None:intergenic | 30.0% | |
| ACAAAGCAAGTTAAACAACT+CGG | + | chr4_1:18149723-18149742 | None:intergenic | 30.0% | |
| ! | GTTTTTATTCTCCGATCAAA+TGG | - | chr4_1:18149796-18149815 | Msa0538670:intron | 30.0% |
| GTTAGATTCTACATGCAAAT+TGG | - | chr4_1:18149852-18149871 | Msa0538670:CDS | 30.0% | |
| !! | CAGTATTGACGATAAATTTC+AGG | + | chr4_1:18149979-18149998 | None:intergenic | 30.0% |
| CTGAAATTTATCGTCAATAC+TGG | - | chr4_1:18149977-18149996 | Msa0538670:CDS | 30.0% | |
| CATATGATCAGATCCTATAT+GGG | + | chr4_1:18150275-18150294 | None:intergenic | 30.0% | |
| ATCATATGGAGGATAACTTT+GGG | - | chr4_1:18150287-18150306 | Msa0538670:intron | 30.0% | |
| GATCAATTGAAGCTATCATT+CGG | + | chr4_1:18150400-18150419 | None:intergenic | 30.0% | |
| AAATTCAAAAGAGGGATATC+AGG | - | chr4_1:18150536-18150555 | Msa0538670:intron | 30.0% | |
| AATTCAAAAGAGGGATATCA+GGG | - | chr4_1:18150537-18150556 | Msa0538670:intron | 30.0% | |
| ! | TGTTTTCATGAGAGAATAGA+TGG | - | chr4_1:18150625-18150644 | Msa0538670:intron | 30.0% |
| CCAAGTCAAAGAATCAATAA+AGG | + | chr4_1:18151172-18151191 | None:intergenic | 30.0% | |
| !! | CCTTTATTGATTCTTTGACT+TGG | - | chr4_1:18151169-18151188 | Msa0538670:intron | 30.0% |
| !! | ATTCTTTGACTTGGATGTAT+TGG | - | chr4_1:18151178-18151197 | Msa0538670:intron | 30.0% |
| ! | TGGAATAATGTTTTCCAATC+TGG | - | chr4_1:18151239-18151258 | Msa0538670:intron | 30.0% |
| GATATACCTTTCACTAAAAC+TGG | + | chr4_1:18151324-18151343 | None:intergenic | 30.0% | |
| !!! | ATTTTATTTTTTGGGGTGCA+GGG | - | chr4_1:18151365-18151384 | Msa0538670:intron | 30.0% |
| ! | GAGAGATATGGATTGAGAAT+AGG | + | chr4_1:18145457-18145476 | None:intergenic | 35.0% |
| ! | TTTTCATAAGCTCTTCAGGT+TGG | - | chr4_1:18146181-18146200 | Msa0538670:intron | 35.0% |
| CAGTGTATTATTGGCCATTA+AGG | + | chr4_1:18146350-18146369 | None:intergenic | 35.0% | |
| CATGGTAGGACTTGAAAAAA+TGG | + | chr4_1:18146415-18146434 | None:intergenic | 35.0% | |
| ! | ACATCACCCAACTTTTGTAA+GGG | + | chr4_1:18146450-18146469 | None:intergenic | 35.0% |
| ! | CTTGACTAACTTGTCTTTGA+TGG | - | chr4_1:18146613-18146632 | Msa0538670:intron | 35.0% |
| CTTCACTTCTATATAGGATC+AGG | - | chr4_1:18146645-18146664 | Msa0538670:intron | 35.0% | |
| TACAAAAACAACTTGACGAC+GGG | + | chr4_1:18146682-18146701 | None:intergenic | 35.0% | |
| AAGTGCACAGATTTAGTGAA+AGG | + | chr4_1:18146785-18146804 | None:intergenic | 35.0% | |
| TAAAGAAGCTAAGGAATCAG+CGG | - | chr4_1:18146876-18146895 | Msa0538670:CDS | 35.0% | |
| AAAGAGTAATGTAGCTGAAG+TGG | - | chr4_1:18146930-18146949 | Msa0538670:CDS | 35.0% | |
| TGTACAGGATCGAATGATAT+CGG | - | chr4_1:18147019-18147038 | Msa0538670:intron | 35.0% | |
| GAAGAATCTGAGCATCAAAT+TGG | + | chr4_1:18147221-18147240 | None:intergenic | 35.0% | |
| ! | GTTTCAGGTGGCAAAAATAA+CGG | - | chr4_1:18147277-18147296 | Msa0538670:intron | 35.0% |
| TCTTGACAGACATTGAAAGA+TGG | - | chr4_1:18147318-18147337 | Msa0538670:intron | 35.0% | |
| AGACATTGAAAGATGGCAAA+AGG | - | chr4_1:18147325-18147344 | Msa0538670:intron | 35.0% | |
| ! | GGCAAAAGGTATATGACATT+TGG | - | chr4_1:18147339-18147358 | Msa0538670:intron | 35.0% |
| CAACTCCCTGCAAAAAAAAA+AGG | + | chr4_1:18147423-18147442 | None:intergenic | 35.0% | |
| TAGTTCCGTTGATCTAACAA+GGG | - | chr4_1:18147558-18147577 | Msa0538670:intron | 35.0% | |
| AAGATCCCTTGTTAGATCAA+CGG | + | chr4_1:18147566-18147585 | None:intergenic | 35.0% | |
| TGCATAACAGTGTGTCAAAA+TGG | + | chr4_1:18147599-18147618 | None:intergenic | 35.0% | |
| ACGATTAACTACTAGAATGC+AGG | + | chr4_1:18147675-18147694 | None:intergenic | 35.0% | |
| CTCTGTACAGTAATCTCAAT+CGG | + | chr4_1:18147729-18147748 | None:intergenic | 35.0% | |
| TTGACTAGTATCTGAGGAAT+AGG | + | chr4_1:18147768-18147787 | None:intergenic | 35.0% | |
| GCAGATTACCTTATAGTTTC+AGG | - | chr4_1:18147792-18147811 | Msa0538670:intron | 35.0% | |
| TAAATCTGAAGGGGACAAAA+AGG | - | chr4_1:18147949-18147968 | Msa0538670:intron | 35.0% | |
| CAAAAAGGTTATTCAGCAGT+TGG | - | chr4_1:18147964-18147983 | Msa0538670:intron | 35.0% | |
| CGAAATACCTTGGTTGTATA+GGG | + | chr4_1:18147993-18148012 | None:intergenic | 35.0% | |
| TCGAAATACCTTGGTTGTAT+AGG | + | chr4_1:18147994-18148013 | None:intergenic | 35.0% | |
| CTCATTATAAAGCTCCAATG+TGG | + | chr4_1:18148185-18148204 | None:intergenic | 35.0% | |
| CCTCTTAAGTATGTTTCTCA+TGG | + | chr4_1:18148236-18148255 | None:intergenic | 35.0% | |
| CCATGAGAAACATACTTAAG+AGG | - | chr4_1:18148233-18148252 | Msa0538670:intron | 35.0% | |
| TCAGAAGTCACTTCTCAATA+AGG | - | chr4_1:18148315-18148334 | Msa0538670:intron | 35.0% | |
| GAGTGTGAATAATTGTTTGG+TGG | - | chr4_1:18148356-18148375 | Msa0538670:intron | 35.0% | |
| ! | GAATAATTGTTTGGTGGAAG+TGG | - | chr4_1:18148362-18148381 | Msa0538670:intron | 35.0% |
| TAAAGTTGTTGTCATGTGAC+TGG | - | chr4_1:18148794-18148813 | Msa0538670:CDS | 35.0% | |
| AGAATATGAAGGTAAGCTGA+TGG | + | chr4_1:18148963-18148982 | None:intergenic | 35.0% | |
| TAGAGACTTGAAACGGTAAA+TGG | - | chr4_1:18149036-18149055 | Msa0538670:intron | 35.0% | |
| CATACATATGATTGGATGTG+TGG | - | chr4_1:18149153-18149172 | Msa0538670:CDS | 35.0% | |
| TGGTATAAGCTAGACTTAGT+TGG | - | chr4_1:18149246-18149265 | Msa0538670:intron | 35.0% | |
| TAAGCTAGACTTAGTTGGTT+TGG | - | chr4_1:18149251-18149270 | Msa0538670:intron | 35.0% | |
| ! | AAGCTAGACTTAGTTGGTTT+GGG | - | chr4_1:18149252-18149271 | Msa0538670:intron | 35.0% |
| GGATCTAGAGATTAATGAGT+TGG | - | chr4_1:18149388-18149407 | Msa0538670:intron | 35.0% | |
| ! | TAATGAGTTGGAGAAAGACA+TGG | - | chr4_1:18149400-18149419 | Msa0538670:intron | 35.0% |
| ! | TGTTGTTGTTGTATCTTCTC+TGG | - | chr4_1:18149492-18149511 | Msa0538670:intron | 35.0% |
| ! | GTTGTTGTTGTATCTTCTCT+GGG | - | chr4_1:18149493-18149512 | Msa0538670:intron | 35.0% |
| CAAAGCAAGTTAAACAACTC+GGG | + | chr4_1:18149722-18149741 | None:intergenic | 35.0% | |
| !! | CATTGTTGACTTTGTTCAGA+TGG | - | chr4_1:18149894-18149913 | Msa0538670:CDS | 35.0% |
| ! | ACTTTGTTCAGATGGATTCT+CGG | - | chr4_1:18149902-18149921 | Msa0538670:CDS | 35.0% |
| ATATTGGCAATTTGAGGAGA+AGG | - | chr4_1:18150240-18150259 | Msa0538670:five_prime_UTR | 35.0% | |
| ! | AGATCCTATATGGGCTATAT+TGG | + | chr4_1:18150266-18150285 | None:intergenic | 35.0% |
| CCATATGATCAGATCCTATA+TGG | + | chr4_1:18150276-18150295 | None:intergenic | 35.0% | |
| CCATATAGGATCTGATCATA+TGG | - | chr4_1:18150273-18150292 | Msa0538670:intron | 35.0% | |
| TATAGGATCTGATCATATGG+AGG | - | chr4_1:18150276-18150295 | Msa0538670:intron | 35.0% | |
| GATCATATGGAGGATAACTT+TGG | - | chr4_1:18150286-18150305 | Msa0538670:intron | 35.0% | |
| ATTGAAGCTATCATTCGGAA+AGG | + | chr4_1:18150395-18150414 | None:intergenic | 35.0% | |
| !! | TTGCTATTGTTGTTTAGTGC+TGG | - | chr4_1:18150460-18150479 | Msa0538670:intron | 35.0% |
| !! | TGCTATTGTTGTTTAGTGCT+GGG | - | chr4_1:18150461-18150480 | Msa0538670:intron | 35.0% |
| AAGTGCCAAAGTTGTCTAAA+AGG | - | chr4_1:18150560-18150579 | Msa0538670:intron | 35.0% | |
| TTGAACAGTTCAACTTCAGT+AGG | + | chr4_1:18150605-18150624 | None:intergenic | 35.0% | |
| ! | TGAGAGAATAGATGGACTTA+CGG | - | chr4_1:18150633-18150652 | Msa0538670:intron | 35.0% |
| TTCTAACTCATGATCAGCAT+TGG | - | chr4_1:18150834-18150853 | Msa0538670:intron | 35.0% | |
| ! | TGCATTGAAATTGTGCTGAT+TGG | - | chr4_1:18150943-18150962 | Msa0538670:intron | 35.0% |
| AATAAGAGAAGATGCATCCA+TGG | + | chr4_1:18151021-18151040 | None:intergenic | 35.0% | |
| TGCATCTTCTCTTATTCCTT+TGG | - | chr4_1:18151025-18151044 | Msa0538670:intron | 35.0% | |
| TCTCTTATTCCTTTGGATGA+AGG | - | chr4_1:18151032-18151051 | Msa0538670:intron | 35.0% | |
| ! | TGACTTGGATGTATTGGATT+TGG | - | chr4_1:18151184-18151203 | Msa0538670:intron | 35.0% |
| TATAGCAGCTATGTTTATGC+TGG | - | chr4_1:18151277-18151296 | Msa0538670:intron | 35.0% | |
| ATAGCAGCTATGTTTATGCT+GGG | - | chr4_1:18151278-18151297 | Msa0538670:intron | 35.0% | |
| !!! | GATTTTATTTTTTGGGGTGC+AGG | - | chr4_1:18151364-18151383 | Msa0538670:intron | 35.0% |
| !!! | TTTTATTTTTTGGGGTGCAG+GGG | - | chr4_1:18151366-18151385 | Msa0538670:intron | 35.0% |
| TTGTGGTGTGATATTGTTCT+TGG | - | chr4_1:18151458-18151477 | Msa0538670:five_prime_UTR | 35.0% | |
| CTATACCTTGTTCGAATCAG+TGG | + | chr4_1:18145530-18145549 | None:intergenic | 40.0% | |
| ! | TCCAGGATAGCTTGTGAATA+CGG | - | chr4_1:18145935-18145954 | Msa0538670:intron | 40.0% |
| AATCAAACAAGGACCACGTT+TGG | + | chr4_1:18146070-18146089 | None:intergenic | 40.0% | |
| ! | AGAGTGTTTGAGAGAGCTTA+TGG | - | chr4_1:18146128-18146147 | Msa0538670:intron | 40.0% |
| GAGTGTTTGAGAGAGCTTAT+GGG | - | chr4_1:18146129-18146148 | Msa0538670:intron | 40.0% | |
| GGTAGGACTTGAAAAAATGG+TGG | + | chr4_1:18146412-18146431 | None:intergenic | 40.0% | |
| ! | CACATCACCCAACTTTTGTA+AGG | + | chr4_1:18146451-18146470 | None:intergenic | 40.0% |
| CTTACAAAAGTTGGGTGATG+TGG | - | chr4_1:18146449-18146468 | Msa0538670:intron | 40.0% | |
| ! | AGTGGTTTCTTTTCTTCCTC+AGG | - | chr4_1:18146757-18146776 | Msa0538670:intron | 40.0% |
| !! | GATTTAGTGAAAGGTACCTG+AGG | + | chr4_1:18146776-18146795 | None:intergenic | 40.0% |
| GGTCAAGCTTAAAGAAGCTA+AGG | - | chr4_1:18146867-18146886 | Msa0538670:CDS | 40.0% | |
| AAAGAAGCTAAGGAATCAGC+GGG | - | chr4_1:18146877-18146896 | Msa0538670:CDS | 40.0% | |
| TTGGGACGGTATTCAAAAGT+CGG | - | chr4_1:18146961-18146980 | Msa0538670:CDS | 40.0% | |
| TGTACAGCATGTCTTGTAGA+CGG | + | chr4_1:18147005-18147024 | None:intergenic | 40.0% | |
| TTTGTCAGGGACAAAAGAGA+AGG | - | chr4_1:18147076-18147095 | Msa0538670:intron | 40.0% | |
| ACAAAAGAGAAGGTGGTTGT+GGG | - | chr4_1:18147086-18147105 | Msa0538670:intron | 40.0% | |
| GTAGTTCCGTTGATCTAACA+AGG | - | chr4_1:18147557-18147576 | Msa0538670:intron | 40.0% | |
| CAATCGGAACTCCAAATACT+GGG | + | chr4_1:18147713-18147732 | None:intergenic | 40.0% | |
| TCAATCGGAACTCCAAATAC+TGG | + | chr4_1:18147714-18147733 | None:intergenic | 40.0% | |
| CGATTGAGATTACTGTACAG+AGG | - | chr4_1:18147727-18147746 | Msa0538670:intron | 40.0% | |
| GCACAATTGACTAGTATCTG+AGG | + | chr4_1:18147774-18147793 | None:intergenic | 40.0% | |
| TCTAATTTGAGGGGTAACCT+TGG | - | chr4_1:18148762-18148781 | Msa0538670:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4_1:18148875-18148894 | Msa0538670:intron | 40.0% | |
| ATACCTTATCCCACTATGTG+GGG | + | chr4_1:18149469-18149488 | None:intergenic | 40.0% | |
| CATACCTTATCCCACTATGT+GGG | + | chr4_1:18149470-18149489 | None:intergenic | 40.0% | |
| TCATATTCAGGGAGTGAAGA+AGG | + | chr4_1:18149758-18149777 | None:intergenic | 40.0% | |
| CTCCCTGAATATGATCATCA+CGG | - | chr4_1:18149764-18149783 | Msa0538670:intron | 40.0% | |
| CACCGTGATGATCATATTCA+GGG | + | chr4_1:18149769-18149788 | None:intergenic | 40.0% | |
| TCACCGTGATGATCATATTC+AGG | + | chr4_1:18149770-18149789 | None:intergenic | 40.0% | |
| CTTAAGGTCAGCCATTTGAT+CGG | + | chr4_1:18149810-18149829 | None:intergenic | 40.0% | |
| AAATGGCACCTGTTATCATG+TGG | - | chr4_1:18149938-18149957 | Msa0538670:intron | 40.0% | |
| ACCTGTTATCATGTGGCAAA+AGG | - | chr4_1:18149945-18149964 | Msa0538670:intron | 40.0% | |
| CCTGTTATCATGTGGCAAAA+GGG | - | chr4_1:18149946-18149965 | Msa0538670:intron | 40.0% | |
| TTCTGGATTCAAGCTCTGTT+TGG | + | chr4_1:18150025-18150044 | None:intergenic | 40.0% | |
| AGAACCTGGTTCAACTACTT+GGG | - | chr4_1:18150041-18150060 | Msa0538670:CDS | 40.0% | |
| AAGGCCAATATAGCCCATAT+AGG | - | chr4_1:18150259-18150278 | Msa0538670:intron | 40.0% | |
| AGGATAACTTTGGGTGTAGA+AGG | - | chr4_1:18150296-18150315 | Msa0538670:intron | 40.0% | |
| GTTCAACTTCAGTAGGTGTA+TGG | + | chr4_1:18150598-18150617 | None:intergenic | 40.0% | |
| ! | ATTAACTGATGTTGGCCTCT+TGG | - | chr4_1:18150756-18150775 | Msa0538670:intron | 40.0% |
| ! | TTAACTGATGTTGGCCTCTT+GGG | - | chr4_1:18150757-18150776 | Msa0538670:intron | 40.0% |
| TCTTGGGATCTTCTTTCCAA+GGG | - | chr4_1:18150773-18150792 | Msa0538670:intron | 40.0% | |
| TAGCAGCTATGTTTATGCTG+GGG | - | chr4_1:18151279-18151298 | Msa0538670:intron | 40.0% | |
| TTTATGCTGGGGAAACATGT+TGG | - | chr4_1:18151290-18151309 | Msa0538670:intron | 40.0% | |
| TTATGCTGGGGAAACATGTT+GGG | - | chr4_1:18151291-18151310 | Msa0538670:intron | 40.0% | |
| !! | ACTGGTCCAGTTTTAGTGAA+AGG | - | chr4_1:18151315-18151334 | Msa0538670:intron | 40.0% |
| !!! | TTTATTTTTTGGGGTGCAGG+GGG | - | chr4_1:18151367-18151386 | Msa0538670:intron | 40.0% |
| TTAGTGATGAGAGTTTCTGC+AGG | + | chr4_1:18151428-18151447 | None:intergenic | 40.0% | |
| TGGTGTGATATTGTTCTTGG+TGG | - | chr4_1:18151461-18151480 | Msa0538670:five_prime_UTR | 40.0% | |
| !! | ACCTTCCACTGATTCGAACA+AGG | - | chr4_1:18145522-18145541 | Msa0538670:three_prime_UTR | 45.0% |
| ACCTTGTTCGAATCAGTGGA+AGG | + | chr4_1:18145526-18145545 | None:intergenic | 45.0% | |
| GGTCTCTTATTGGATGTCAG+TGG | + | chr4_1:18146391-18146410 | None:intergenic | 45.0% | |
| TGGGTGATGTGGCAAATTAG+TGG | - | chr4_1:18146460-18146479 | Msa0538670:intron | 45.0% | |
| CACTGAGGTGAGATTACAGA+AGG | + | chr4_1:18146724-18146743 | None:intergenic | 45.0% | |
| CTTCTGTAATCTCACCTCAG+TGG | - | chr4_1:18146722-18146741 | Msa0538670:intron | 45.0% | |
| GAATCAGCGGGAACATTTGT+TGG | - | chr4_1:18146889-18146908 | Msa0538670:CDS | 45.0% | |
| ! | ATTTGTTGGCGAGGTCACAA+AGG | - | chr4_1:18146903-18146922 | Msa0538670:CDS | 45.0% |
| GAGTAATGTAGCTGAAGTGG+CGG | - | chr4_1:18146933-18146952 | Msa0538670:CDS | 45.0% | |
| AGTAATGTAGCTGAAGTGGC+GGG | - | chr4_1:18146934-18146953 | Msa0538670:CDS | 45.0% | |
| GACGGTATTCAAAAGTCGGT+GGG | - | chr4_1:18146965-18146984 | Msa0538670:CDS | 45.0% | |
| GTCTACAAGACATGCTGTAC+AGG | - | chr4_1:18147004-18147023 | Msa0538670:intron | 45.0% | |
| GACAAAAGAGAAGGTGGTTG+TGG | - | chr4_1:18147085-18147104 | Msa0538670:intron | 45.0% | |
| CAAAAGAGAAGGTGGTTGTG+GGG | - | chr4_1:18147087-18147106 | Msa0538670:intron | 45.0% | |
| CCACATTACCTCTTCAACCT+TGG | + | chr4_1:18147117-18147136 | None:intergenic | 45.0% | |
| CCAAGGTTGAAGAGGTAATG+TGG | - | chr4_1:18147114-18147133 | Msa0538670:intron | 45.0% | |
| CAGGGAGTTGCTAAAACTGA+CGG | - | chr4_1:18147433-18147452 | Msa0538670:intron | 45.0% | |
| CATCTTGACCACCCAGTATT+TGG | - | chr4_1:18147699-18147718 | Msa0538670:intron | 45.0% | |
| TTGGTTGCCCTATACAACCA+AGG | - | chr4_1:18147983-18148002 | Msa0538670:intron | 45.0% | |
| TCAACTGGATTTGAGCCTTC+TGG | + | chr4_1:18148112-18148131 | None:intergenic | 45.0% | |
| ACAAGAGCTGCTACATCAAC+TGG | + | chr4_1:18148127-18148146 | None:intergenic | 45.0% | |
| TAAAGCTCCAATGTGGTCAG+TGG | + | chr4_1:18148178-18148197 | None:intergenic | 45.0% | |
| CAGAGTCATATAGTTCACGC+TGG | + | chr4_1:18148263-18148282 | None:intergenic | 45.0% | |
| CAGCGTGAACTATATGACTC+TGG | - | chr4_1:18148261-18148280 | Msa0538670:intron | 45.0% | |
| GAAGTGACTTCTGACTAGCA+CGG | + | chr4_1:18148309-18148328 | None:intergenic | 45.0% | |
| ! | TTGTTTGGTGGAAGTGGGAT+TGG | - | chr4_1:18148368-18148387 | Msa0538670:intron | 45.0% |
| ! | TGTTTGGTGGAAGTGGGATT+GGG | - | chr4_1:18148369-18148388 | Msa0538670:intron | 45.0% |
| GTGGGATTGGGTTTCGTATA+TGG | - | chr4_1:18148381-18148400 | Msa0538670:intron | 45.0% | |
| GTTGTTGTCATGTGACTGGA+AGG | - | chr4_1:18148798-18148817 | Msa0538670:CDS | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4_1:18148871-18148890 | Msa0538670:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4_1:18148874-18148893 | Msa0538670:intron | 45.0% | |
| GGATGTGTGGTAAGACTAGA+CGG | - | chr4_1:18149166-18149185 | Msa0538670:CDS | 45.0% | |
| GATGTGTGGTAAGACTAGAC+GGG | - | chr4_1:18149167-18149186 | Msa0538670:CDS | 45.0% | |
| AAGGAGAGTAGATCAGATCG+AGG | - | chr4_1:18149307-18149326 | Msa0538670:intron | 45.0% | |
| AGGAGAGTAGATCAGATCGA+GGG | - | chr4_1:18149308-18149327 | Msa0538670:intron | 45.0% | |
| GAGTCATGTCACTAGTGGTA+GGG | - | chr4_1:18149331-18149350 | Msa0538670:intron | 45.0% | |
| AGTCATGTCACTAGTGGTAG+GGG | - | chr4_1:18149332-18149351 | Msa0538670:intron | 45.0% | |
| GGTCGGCTACATGAATCAAA+CGG | + | chr4_1:18149448-18149467 | None:intergenic | 45.0% | |
| CCATACCTTATCCCACTATG+TGG | + | chr4_1:18149471-18149490 | None:intergenic | 45.0% | |
| ! | CCACATAGTGGGATAAGGTA+TGG | - | chr4_1:18149468-18149487 | Msa0538670:intron | 45.0% |
| !! | TGTTGTATCTTCTCTGGGAC+AGG | - | chr4_1:18149498-18149517 | Msa0538670:intron | 45.0% |
| ! | CCCTTTTGCCACATGATAAC+AGG | + | chr4_1:18149949-18149968 | None:intergenic | 45.0% |
| GGATTCAAGCTCTGTTTGGA+AGG | + | chr4_1:18150021-18150040 | None:intergenic | 45.0% | |
| CAAGTAGTTGAACCAGGTTC+TGG | + | chr4_1:18150042-18150061 | None:intergenic | 45.0% | |
| CAGAACCTGGTTCAACTACT+TGG | - | chr4_1:18150040-18150059 | Msa0538670:CDS | 45.0% | |
| ATGTCCCAAGTAGTTGAACC+AGG | + | chr4_1:18150048-18150067 | None:intergenic | 45.0% | |
| ! | GAGAATAGATGGACTTACGG+AGG | - | chr4_1:18150636-18150655 | Msa0538670:intron | 45.0% |
| AGGTGACAGTGTTCTTATGG+AGG | - | chr4_1:18150656-18150675 | Msa0538670:intron | 45.0% | |
| CTTGGAAAGAAGATCCCAAG+AGG | + | chr4_1:18150774-18150793 | None:intergenic | 45.0% | |
| CTCTTGGGATCTTCTTTCCA+AGG | - | chr4_1:18150772-18150791 | Msa0538670:intron | 45.0% | |
| CTTGGGATCTTCTTTCCAAG+GGG | - | chr4_1:18150774-18150793 | Msa0538670:intron | 45.0% | |
| AAATGTTTAGCCACACCCCT+TGG | + | chr4_1:18150792-18150811 | None:intergenic | 45.0% | |
| TCATTTCCAGACTGTCTCGT+TGG | + | chr4_1:18151132-18151151 | None:intergenic | 45.0% | |
| AATGATCGTCACGTCCAGAT+TGG | + | chr4_1:18151256-18151275 | None:intergenic | 45.0% | |
| !!! | TTATTTTTTGGGGTGCAGGG+GGG | - | chr4_1:18151368-18151387 | Msa0538670:intron | 45.0% |
| !!! | TTTATATATAATTTTAATGT+AGG | - | chr4_1:18146844-18146863 | Msa0538670:intron | 5.0% |
| !!! | TTATATATAATTTTAATGTA+GGG | - | chr4_1:18146845-18146864 | Msa0538670:intron | 5.0% |
| !!! | TTTTTACTTTAATTAAAAAT+TGG | - | chr4_1:18147643-18147662 | Msa0538670:intron | 5.0% |
| !!! | ATTAAGTAATTAATTTTTTT+TGG | - | chr4_1:18148502-18148521 | Msa0538670:intron | 5.0% |
| AGTCTCGCACGTACTTGTGT+CGG | + | chr4_1:18145856-18145875 | None:intergenic | 50.0% | |
| GCCGTATTCACAAGCTATCC+TGG | + | chr4_1:18145939-18145958 | None:intergenic | 50.0% | |
| CTCACCTCAGTGGCAAGATA+AGG | - | chr4_1:18146732-18146751 | Msa0538670:intron | 50.0% | |
| GGACGGTATTCAAAAGTCGG+TGG | - | chr4_1:18146964-18146983 | Msa0538670:CDS | 50.0% | |
| TTCCTGAGGAGAGGTTTGTC+AGG | - | chr4_1:18147062-18147081 | Msa0538670:intron | 50.0% | |
| TCCTGAGGAGAGGTTTGTCA+GGG | - | chr4_1:18147063-18147082 | Msa0538670:intron | 50.0% | |
| GTCAGGGACAAAAGAGAAGG+TGG | - | chr4_1:18147079-18147098 | Msa0538670:intron | 50.0% | |
| GGGGAAATCCAAGGTTGAAG+AGG | - | chr4_1:18147106-18147125 | Msa0538670:intron | 50.0% | |
| TCGGAACTCCAAATACTGGG+TGG | + | chr4_1:18147710-18147729 | None:intergenic | 50.0% | |
| ACTAGCACGGAGCAAAAGTG+CGG | + | chr4_1:18148296-18148315 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4_1:18148782-18148801 | None:intergenic | 50.0% | |
| GTCATGTGACTGGAAGGTCA+CGG | - | chr4_1:18148804-18148823 | Msa0538670:CDS | 50.0% | |
| TCATGTGACTGGAAGGTCAC+GGG | - | chr4_1:18148805-18148824 | Msa0538670:CDS | 50.0% | |
| AAGGTCACGGGTTCAAGTCT+TGG | - | chr4_1:18148817-18148836 | Msa0538670:CDS | 50.0% | |
| CTAAAGCTCCAGCATACGCA+GGG | + | chr4_1:18148914-18148933 | None:intergenic | 50.0% | |
| ACTAAAGCTCCAGCATACGC+AGG | + | chr4_1:18148915-18148934 | None:intergenic | 50.0% | |
| ! | ATGCTGGAGCTTTAGTGCAC+CGG | - | chr4_1:18148919-18148938 | Msa0538670:intron | 50.0% |
| AGCTGATGGCCAGACACAAA+GGG | + | chr4_1:18148949-18148968 | None:intergenic | 50.0% | |
| AAGCTGATGGCCAGACACAA+AGG | + | chr4_1:18148950-18148969 | None:intergenic | 50.0% | |
| GGAGAGTAGATCAGATCGAG+GGG | - | chr4_1:18149309-18149328 | Msa0538670:intron | 50.0% | |
| GGAGTCATGTCACTAGTGGT+AGG | - | chr4_1:18149330-18149349 | Msa0538670:intron | 50.0% | |
| CTTATCCCACTATGTGGGGT+CGG | + | chr4_1:18149465-18149484 | None:intergenic | 50.0% | |
| CGGGAAACAGAGCTAAAACG+AGG | + | chr4_1:18149703-18149722 | None:intergenic | 50.0% | |
| TCGGAGCCTTGCAATGGAAA+TGG | - | chr4_1:18149921-18149940 | Msa0538670:CDS | 50.0% | |
| !! | CAGGTGCCATTTCCATTGCA+AGG | + | chr4_1:18149930-18149949 | None:intergenic | 50.0% |
| CAGAGCTTGAATCCAGAACC+TGG | - | chr4_1:18150027-18150046 | Msa0538670:CDS | 50.0% | |
| CGGAGGTGACAGTGTTCTTA+TGG | - | chr4_1:18150653-18150672 | Msa0538670:intron | 50.0% | |
| GATCTTCTTTCCAAGGGGTG+TGG | - | chr4_1:18150779-18150798 | Msa0538670:intron | 50.0% | |
| ACTGGCATGCCTTCATCCAA+AGG | + | chr4_1:18151044-18151063 | None:intergenic | 50.0% | |
| ! | GAAGGCATGCCAGTTGACTT+CGG | - | chr4_1:18151050-18151069 | Msa0538670:intron | 50.0% |
| TCGATTGCACCGAAGTCAAC+TGG | + | chr4_1:18151062-18151081 | None:intergenic | 50.0% | |
| TGGGGAAACATGTTGGGTAC+TGG | - | chr4_1:18151297-18151316 | Msa0538670:intron | 50.0% | |
| CTCGCCTTATCTTGCCACTG+AGG | + | chr4_1:18146739-18146758 | None:intergenic | 55.0% | |
| CAGTGGCAAGATAAGGCGAG+TGG | - | chr4_1:18146739-18146758 | Msa0538670:intron | 55.0% | |
| ! | AGCGGGAACATTTGTTGGCG+AGG | - | chr4_1:18146894-18146913 | Msa0538670:CDS | 55.0% |
| ! | AGCTGAAGTGGCGGGAAAGT+TGG | - | chr4_1:18146942-18146961 | Msa0538670:CDS | 55.0% |
| ! | GCTGAAGTGGCGGGAAAGTT+GGG | - | chr4_1:18146943-18146962 | Msa0538670:CDS | 55.0% |
| ! | AAGTGGCGGGAAAGTTGGGA+CGG | - | chr4_1:18146947-18146966 | Msa0538670:CDS | 55.0% |
| ! | ATATCGGCTGCTGCTACGAC+TGG | - | chr4_1:18147035-18147054 | Msa0538670:intron | 55.0% |
| CTACGACTGGTGCATTCCTG+AGG | - | chr4_1:18147048-18147067 | Msa0538670:intron | 55.0% | |
| ACTGGTGCATTCCTGAGGAG+AGG | - | chr4_1:18147053-18147072 | Msa0538670:intron | 55.0% | |
| TCCCTGACAAACCTCTCCTC+AGG | + | chr4_1:18147067-18147086 | None:intergenic | 55.0% | |
| GGTGGTTGTGGGGAAATCCA+AGG | - | chr4_1:18147097-18147116 | Msa0538670:intron | 55.0% | |
| TCAACTGCTGCAGTGCCAGA+AGG | - | chr4_1:18148094-18148113 | Msa0538670:intron | 55.0% | |
| ATGTGGTCAGTGGCTCAGGA+AGG | + | chr4_1:18148168-18148187 | None:intergenic | 55.0% | |
| TCCTGAGCCACTGACCACAT+TGG | - | chr4_1:18148168-18148187 | Msa0538670:intron | 55.0% | |
| TCCAATGTGGTCAGTGGCTC+AGG | + | chr4_1:18148172-18148191 | None:intergenic | 55.0% | |
| ! | TGCTGGAGCTTTAGTGCACC+GGG | - | chr4_1:18148920-18148939 | Msa0538670:intron | 55.0% |
| GAGGGGAGTCATGTCACTAG+TGG | - | chr4_1:18149326-18149345 | Msa0538670:intron | 55.0% | |
| ATGTAGCCGACCCCACATAG+TGG | - | chr4_1:18149456-18149475 | Msa0538670:intron | 55.0% | |
| TGTAGCCGACCCCACATAGT+GGG | - | chr4_1:18149457-18149476 | Msa0538670:intron | 55.0% | |
| ! | CGACCCCACATAGTGGGATA+AGG | - | chr4_1:18149463-18149482 | Msa0538670:intron | 55.0% |
| GGATTCTCGGAGCCTTGCAA+TGG | - | chr4_1:18149915-18149934 | Msa0538670:CDS | 55.0% | |
| ACTACTTGGGACATGCTCGC+TGG | - | chr4_1:18150054-18150073 | Msa0538670:intron | 55.0% | |
| TGCAGACGAGAGTGAAGCCA+TGG | - | chr4_1:18151001-18151020 | Msa0538670:intron | 55.0% | |
| CAGATGCCAACGAGACAGTC+TGG | - | chr4_1:18151123-18151142 | Msa0538670:intron | 55.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4_1:18148771-18148790 | Msa0538670:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4_1:18148887-18148906 | Msa0538670:intron | 60.0% |
| ACCGGGTTGCCCTTTGTGTC+TGG | - | chr4_1:18148937-18148956 | Msa0538670:CDS | 60.0% | |
| GCCAGACACAAAGGGCAACC+CGG | + | chr4_1:18148941-18148960 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr4_1:18148889-18148908 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr4_1:18148902-18148921 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr4_1:18148903-18148922 | None:intergenic | 65.0% | |
| AGCATACGCAGGGTCCGGGA+AGG | + | chr4_1:18148904-18148923 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+TGG | - | chr4_1:18148903-18148922 | Msa0538670:intron | 65.0% | |
| CTCCAGCATACGCAGGGTCC+GGG | + | chr4_1:18148908-18148927 | None:intergenic | 65.0% | |
| GCTCCAGCATACGCAGGGTC+CGG | + | chr4_1:18148909-18148928 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 18145384 | 18151547 | 18145384 | ID=Msa0538670;Name=Msa0538670 |
| chr4_1 | mRNA | 18145384 | 18151547 | 18145384 | ID=Msa0538670-mRNA-1;Parent=Msa0538670;Name=Msa0538670-mRNA-1;_AED=0.14;_eAED=0.14;_QI=217|0.9|0.81|1|0.9|0.81|11|396|374 |
| chr4_1 | exon | 18145384 | 18145925 | 18145384 | ID=Msa0538670-mRNA-1:exon:5372;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18146856 | 18147018 | 18146856 | ID=Msa0538670-mRNA-1:exon:5371;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18148595 | 18148839 | 18148595 | ID=Msa0538670-mRNA-1:exon:5370;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18148927 | 18149004 | 18148927 | ID=Msa0538670-mRNA-1:exon:5369;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18149118 | 18149216 | 18149118 | ID=Msa0538670-mRNA-1:exon:5368;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18149477 | 18149495 | 18149477 | ID=Msa0538670-mRNA-1:exon:5367;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18149585 | 18149647 | 18149585 | ID=Msa0538670-mRNA-1:exon:5366;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18149804 | 18149951 | 18149804 | ID=Msa0538670-mRNA-1:exon:5365;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18149963 | 18150065 | 18149963 | ID=Msa0538670-mRNA-1:exon:5364;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18150153 | 18150270 | 18150153 | ID=Msa0538670-mRNA-1:exon:5363;Parent=Msa0538670-mRNA-1 |
| chr4_1 | exon | 18151388 | 18151547 | 18151388 | ID=Msa0538670-mRNA-1:exon:5362;Parent=Msa0538670-mRNA-1 |
| chr4_1 | five_prime_UTR | 18151388 | 18151547 | 18151388 | ID=Msa0538670-mRNA-1:five_prime_utr;Parent=Msa0538670-mRNA-1 |
| chr4_1 | five_prime_UTR | 18150214 | 18150270 | 18150214 | ID=Msa0538670-mRNA-1:five_prime_utr;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18150153 | 18150213 | 18150153 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18149963 | 18150065 | 18149963 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18149804 | 18149951 | 18149804 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18149585 | 18149647 | 18149585 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18149477 | 18149495 | 18149477 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18149118 | 18149216 | 18149118 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18148927 | 18149004 | 18148927 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18148595 | 18148839 | 18148595 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18146856 | 18147018 | 18146856 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | CDS | 18145780 | 18145925 | 18145780 | ID=Msa0538670-mRNA-1:cds;Parent=Msa0538670-mRNA-1 |
| chr4_1 | three_prime_UTR | 18145384 | 18145779 | 18145384 | ID=Msa0538670-mRNA-1:three_prime_utr;Parent=Msa0538670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
