Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079370 | XP_003590981.1 | 98.214 | 560 | 10 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079370 | sp|Q501D1|Y1490_ARATH | 53.899 | 577 | 244 | 9 | 1 | 560 | 1 | 572 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079370 | G7I6T7 | 98.214 | 560 | 10 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015130 | Msa0079370 | 0.806098 | 9.698726e-50 | -8.615850e-47 |
| Msa0017320 | Msa0079370 | 0.809735 | 1.633876e-50 | -8.615850e-47 |
| Msa0020410 | Msa0079370 | 0.801215 | 1.000271e-48 | -8.615850e-47 |
| Msa0028620 | Msa0079370 | 0.860647 | 1.784800e-63 | -8.615850e-47 |
| Msa0032080 | Msa0079370 | 0.894884 | 1.619016e-75 | -8.615850e-47 |
| Msa0032100 | Msa0079370 | 0.896179 | 4.727348e-76 | -8.615850e-47 |
| Msa0036140 | Msa0079370 | 0.801258 | 9.802899e-49 | -8.615850e-47 |
| Msa0043980 | Msa0079370 | 0.821998 | 2.995758e-53 | -8.615850e-47 |
| Msa0051210 | Msa0079370 | 0.844720 | 6.346448e-59 | -8.615850e-47 |
| Msa0051450 | Msa0079370 | 0.839715 | 1.342040e-57 | -8.615850e-47 |
| Msa0053860 | Msa0079370 | 0.804444 | 2.153679e-49 | -8.615850e-47 |
| Msa0065680 | Msa0079370 | -0.805335 | 1.403210e-49 | -8.615850e-47 |
| Msa0078480 | Msa0079370 | 0.800636 | 1.313609e-48 | -8.615850e-47 |
| Msa0078640 | Msa0079370 | 0.806828 | 6.805969e-50 | -8.615850e-47 |
| Msa0079070 | Msa0079370 | 0.822045 | 2.922194e-53 | -8.615850e-47 |
| Msa0079370 | Msa0079390 | 0.921785 | 2.289110e-88 | -8.615850e-47 |
| Msa0079370 | Msa0090570 | 0.802957 | 4.384612e-49 | -8.615850e-47 |
| Msa0079370 | Msa0101830 | 0.836024 | 1.192447e-56 | -8.615850e-47 |
| Msa0079370 | Msa0102140 | 0.826631 | 2.440416e-54 | -8.615850e-47 |
| Msa0079370 | Msa0115790 | 0.809013 | 2.333286e-50 | -8.615850e-47 |
| Msa0079370 | Msa0124320 | 0.852015 | 6.089861e-61 | -8.615850e-47 |
| Msa0079370 | Msa0127800 | 0.802948 | 4.403835e-49 | -8.615850e-47 |
| Msa0079370 | Msa0131770 | 0.801408 | 9.132123e-49 | -8.615850e-47 |
| Msa0079370 | Msa0138020 | 0.858140 | 1.010679e-62 | -8.615850e-47 |
| Msa0079370 | Msa0143930 | 0.853976 | 1.673304e-61 | -8.615850e-47 |
| Msa0079370 | Msa0152560 | 0.804749 | 1.860243e-49 | -8.615850e-47 |
| Msa0079370 | Msa0172060 | 0.824331 | 8.553313e-54 | -8.615850e-47 |
| Msa0079370 | Msa0172080 | 0.888685 | 4.739684e-73 | -8.615850e-47 |
| Msa0079370 | Msa0175360 | 0.808577 | 2.892950e-50 | -8.615850e-47 |
| Msa0079370 | Msa0178510 | 0.803935 | 2.749429e-49 | -8.615850e-47 |
| Msa0079370 | Msa0186950 | 0.808419 | 3.126166e-50 | -8.615850e-47 |
| Msa0079370 | Msa0189030 | 0.832250 | 1.052000e-55 | -8.615850e-47 |
| Msa0079370 | Msa0189110 | 0.831475 | 1.634994e-55 | -8.615850e-47 |
| Msa0079370 | Msa0200850 | 0.804100 | 2.539862e-49 | -8.615850e-47 |
| Msa0079370 | Msa0204840 | 0.820706 | 5.952124e-53 | -8.615850e-47 |
| Msa0079370 | Msa0206010 | 0.817432 | 3.308479e-52 | -8.615850e-47 |
| Msa0079370 | Msa0218370 | 0.862263 | 5.734672e-64 | -8.615850e-47 |
| Msa0079370 | Msa0219590 | 0.820964 | 5.191457e-53 | -8.615850e-47 |
| Msa0079370 | Msa0223910 | 0.832584 | 8.696239e-56 | -8.615850e-47 |
| Msa0079370 | Msa0231240 | 0.846020 | 2.822824e-59 | -8.615850e-47 |
| Msa0079370 | Msa0232020 | 0.819337 | 1.224495e-52 | -8.615850e-47 |
| Msa0079370 | Msa0232340 | 0.806743 | 7.093881e-50 | -8.615850e-47 |
| Msa0079370 | Msa0236420 | 0.856155 | 3.894865e-62 | -8.615850e-47 |
| Msa0079370 | Msa0240270 | 0.806605 | 7.584942e-50 | -8.615850e-47 |
| Msa0079370 | Msa0241140 | 0.814835 | 1.258571e-51 | -8.615850e-47 |
| Msa0079370 | Msa0243480 | 0.839465 | 1.559546e-57 | -8.615850e-47 |
| Msa0079370 | Msa0245860 | 0.803928 | 2.758592e-49 | -8.615850e-47 |
| Msa0079370 | Msa0260780 | 0.801856 | 7.391041e-49 | -8.615850e-47 |
| Msa0079370 | Msa0265150 | 0.833643 | 4.739278e-56 | -8.615850e-47 |
| Msa0079370 | Msa0270960 | 0.857781 | 1.291873e-62 | -8.615850e-47 |
| Msa0079370 | Msa0271550 | 0.803673 | 3.115456e-49 | -8.615850e-47 |
| Msa0079370 | Msa0271790 | 0.801841 | 7.444050e-49 | -8.615850e-47 |
| Msa0079370 | Msa0278580 | 0.802663 | 5.040879e-49 | -8.615850e-47 |
| Msa0079370 | Msa0281930 | 0.847464 | 1.137212e-59 | -8.615850e-47 |
| Msa0079370 | Msa0286670 | 0.808343 | 3.244366e-50 | -8.615850e-47 |
| Msa0079370 | Msa0287410 | 0.803932 | 2.753275e-49 | -8.615850e-47 |
| Msa0079370 | Msa0287790 | 0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa0079370 | Msa0287870 | 0.829493 | 4.990299e-55 | -8.615850e-47 |
| Msa0079370 | Msa0288120 | 0.810436 | 1.153959e-50 | -8.615850e-47 |
| Msa0079370 | Msa0308460 | 0.811372 | 7.234381e-51 | -8.615850e-47 |
| Msa0079370 | Msa0309270 | 0.834584 | 2.753786e-56 | -8.615850e-47 |
| Msa0079370 | Msa0321080 | 0.818345 | 2.057843e-52 | -8.615850e-47 |
| Msa0079370 | Msa0323370 | 0.842413 | 2.625652e-58 | -8.615850e-47 |
| Msa0079370 | Msa0326110 | 0.825388 | 4.817968e-54 | -8.615850e-47 |
| Msa0079370 | Msa0363790 | 0.866880 | 2.062099e-65 | -8.615850e-47 |
| Msa0079370 | Msa0366210 | 0.806731 | 7.135847e-50 | -8.615850e-47 |
| Msa0079370 | Msa0367870 | 0.816217 | 6.197902e-52 | -8.615850e-47 |
| Msa0079370 | Msa0382370 | 0.804182 | 2.442168e-49 | -8.615850e-47 |
| Msa0079370 | Msa0388730 | 0.816070 | 6.682954e-52 | -8.615850e-47 |
| Msa0079370 | Msa0397250 | 0.809426 | 1.903594e-50 | -8.615850e-47 |
| Msa0079370 | Msa0398200 | 0.808842 | 2.538748e-50 | -8.615850e-47 |
| Msa0079370 | Msa0417330 | 0.802086 | 6.627374e-49 | -8.615850e-47 |
| Msa0079370 | Msa0432160 | 0.828205 | 1.023181e-54 | -8.615850e-47 |
| Msa0079370 | Msa0434540 | 0.817982 | 2.485813e-52 | -8.615850e-47 |
| Msa0079370 | Msa0438040 | 0.836574 | 8.639905e-57 | -8.615850e-47 |
| Msa0079370 | Msa0455760 | 0.838703 | 2.457105e-57 | -8.615850e-47 |
| Msa0079370 | Msa0471900 | 0.817859 | 2.649604e-52 | -8.615850e-47 |
| Msa0079370 | Msa0476680 | 0.827796 | 1.283731e-54 | -8.615850e-47 |
| Msa0079370 | Msa0485490 | 0.811636 | 6.341748e-51 | -8.615850e-47 |
| Msa0079370 | Msa0486690 | 0.868884 | 4.683895e-66 | -8.615850e-47 |
| Msa0079370 | Msa0518380 | 0.825624 | 4.234265e-54 | -8.615850e-47 |
| Msa0079370 | Msa0521010 | 0.825229 | 5.252984e-54 | -8.615850e-47 |
| Msa0079370 | Msa0522500 | 0.818424 | 1.974413e-52 | -8.615850e-47 |
| Msa0079370 | Msa0526070 | -0.811251 | 7.684958e-51 | -8.615850e-47 |
| Msa0079370 | Msa0538670 | 0.846626 | 1.930096e-59 | -8.615850e-47 |
| Msa0079370 | Msa0566350 | 0.817643 | 2.964464e-52 | -8.615850e-47 |
| Msa0079370 | Msa0566750 | 0.814741 | 1.319871e-51 | -8.615850e-47 |
| Msa0079370 | Msa0573890 | 0.804458 | 2.139144e-49 | -8.615850e-47 |
| Msa0079370 | Msa0594560 | 0.805091 | 1.577960e-49 | -8.615850e-47 |
| Msa0079370 | Msa0604290 | 0.809746 | 1.624432e-50 | -8.615850e-47 |
| Msa0079370 | Msa0613340 | 0.802297 | 5.998792e-49 | -8.615850e-47 |
| Msa0079370 | Msa0622170 | -0.806224 | 9.127152e-50 | -8.615850e-47 |
| Msa0079370 | Msa0623070 | 0.827923 | 1.196422e-54 | -8.615850e-47 |
| Msa0079370 | Msa0623990 | 0.805277 | 1.442978e-49 | -8.615850e-47 |
| Msa0079370 | Msa0624060 | 0.829271 | 5.652826e-55 | -8.615850e-47 |
| Msa0079370 | Msa0627350 | 0.802693 | 4.971313e-49 | -8.615850e-47 |
| Msa0079370 | Msa0645530 | 0.809872 | 1.526198e-50 | -8.615850e-47 |
| Msa0079370 | Msa0654310 | 0.822326 | 2.515153e-53 | -8.615850e-47 |
| Msa0079370 | Msa0672760 | 0.833783 | 4.373000e-56 | -8.615850e-47 |
| Msa0079370 | Msa0676130 | 0.825044 | 5.809748e-54 | -8.615850e-47 |
| Msa0079370 | Msa0676180 | 0.828583 | 8.294261e-55 | -8.615850e-47 |
| Msa0079370 | Msa0685090 | 0.825302 | 5.048117e-54 | -8.615850e-47 |
| Msa0079370 | Msa0688070 | 0.803714 | 3.056026e-49 | -8.615850e-47 |
| Msa0079370 | Msa0711150 | 0.806315 | 8.733298e-50 | -8.615850e-47 |
| Msa0079370 | Msa0713510 | 0.805814 | 1.112861e-49 | -8.615850e-47 |
| Msa0079370 | Msa0716960 | 0.800027 | 1.747594e-48 | -8.615850e-47 |
| Msa0079370 | Msa0717010 | 0.801460 | 8.910072e-49 | -8.615850e-47 |
| Msa0079370 | Msa0722070 | 0.821554 | 3.796328e-53 | -8.615850e-47 |
| Msa0079370 | Msa0731180 | 0.804801 | 1.814714e-49 | -8.615850e-47 |
| Msa0079370 | Msa0763400 | 0.808812 | 2.576818e-50 | -8.615850e-47 |
| Msa0079370 | Msa0763890 | 0.827031 | 1.957886e-54 | -8.615850e-47 |
| Msa0079370 | Msa0763920 | 0.834533 | 2.837738e-56 | -8.615850e-47 |
| Msa0079370 | Msa0765440 | 0.810365 | 1.195344e-50 | -8.615850e-47 |
| Msa0079370 | Msa0773590 | 0.804664 | 1.938154e-49 | -8.615850e-47 |
| Msa0079370 | Msa0784480 | 0.830393 | 3.012395e-55 | -8.615850e-47 |
| Msa0079370 | Msa0796250 | 0.806869 | 6.672183e-50 | -8.615850e-47 |
| Msa0079370 | Msa0796300 | 0.811614 | 6.410093e-51 | -8.615850e-47 |
| Msa0079370 | Msa0796980 | 0.803833 | 2.886112e-49 | -8.615850e-47 |
| Msa0079370 | Msa0797250 | 0.802667 | 5.032080e-49 | -8.615850e-47 |
| Msa0079370 | Msa0797770 | 0.820192 | 7.808622e-53 | -8.615850e-47 |
| Msa0079370 | Msa0805420 | 0.804094 | 2.546917e-49 | -8.615850e-47 |
| Msa0079370 | Msa0811040 | 0.802578 | 5.250458e-49 | -8.615850e-47 |
| Msa0079370 | Msa0818060 | 0.821062 | 4.928578e-53 | -8.615850e-47 |
| Msa0079370 | Msa0830230 | 0.815224 | 1.031715e-51 | -8.615850e-47 |
| Msa0079370 | Msa0831850 | 0.826689 | 2.363955e-54 | -8.615850e-47 |
| Msa0079370 | Msa0832090 | 0.800266 | 1.562367e-48 | -8.615850e-47 |
| Msa0079370 | Msa0835230 | 0.827182 | 1.801437e-54 | -8.615850e-47 |
| Msa0079370 | Msa0844110 | 0.833476 | 5.218259e-56 | -8.615850e-47 |
| Msa0079370 | Msa0894710 | 0.843612 | 1.259030e-58 | -8.615850e-47 |
| Msa0079370 | Msa0899970 | 0.846836 | 1.690501e-59 | -8.615850e-47 |
| Msa0079370 | Msa0921420 | 0.817748 | 2.807560e-52 | -8.615850e-47 |
| Msa0079370 | Msa0936390 | 0.809059 | 2.281708e-50 | -8.615850e-47 |
| Msa0079370 | Msa0958920 | 0.818172 | 2.251484e-52 | -8.615850e-47 |
| Msa0079370 | Msa0960390 | 0.810171 | 1.315968e-50 | -8.615850e-47 |
| Msa0079370 | Msa0965080 | 0.850180 | 2.005883e-60 | -8.615850e-47 |
| Msa0079370 | Msa0965290 | 0.854218 | 1.425027e-61 | -8.615850e-47 |
| Msa0079370 | Msa0992580 | 0.804784 | 1.829186e-49 | -8.615850e-47 |
| Msa0079370 | Msa0992600 | 0.812026 | 5.214496e-51 | -8.615850e-47 |
| Msa0079370 | Msa0994910 | 0.804867 | 1.758136e-49 | -8.615850e-47 |
| Msa0079370 | Msa0999680 | 0.851846 | 6.801654e-61 | -8.615850e-47 |
| Msa0079370 | Msa1011090 | 0.831672 | 1.461509e-55 | -8.615850e-47 |
| Msa0079370 | Msa1039710 | -0.819418 | 1.173776e-52 | -8.615850e-47 |
| Msa0079370 | Msa1054990 | 0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0079370 | Msa1063400 | 0.804093 | 2.548763e-49 | -8.615850e-47 |
| Msa0079370 | Msa1075650 | 0.806537 | 7.838373e-50 | -8.615850e-47 |
| Msa0079370 | Msa1081330 | 0.815133 | 1.080566e-51 | -8.615850e-47 |
| Msa0079370 | Msa1089460 | 0.801035 | 1.088804e-48 | -8.615850e-47 |
| Msa0079370 | Msa1107260 | 0.818257 | 2.153692e-52 | -8.615850e-47 |
| Msa0079370 | Msa1122150 | 0.843588 | 1.277643e-58 | -8.615850e-47 |
| Msa0079370 | Msa1129550 | 0.824668 | 7.123482e-54 | -8.615850e-47 |
| Msa0079370 | Msa1129730 | 0.811201 | 7.880782e-51 | -8.615850e-47 |
| Msa0079370 | Msa1160560 | 0.865238 | 6.825554e-65 | -8.615850e-47 |
| Msa0079370 | Msa1170170 | 0.803288 | 3.744605e-49 | -8.615850e-47 |
| Msa0079370 | Msa1186360 | 0.823455 | 1.372311e-53 | -8.615850e-47 |
| Msa0079370 | Msa1207310 | 0.804828 | 1.790812e-49 | -8.615850e-47 |
| Msa0079370 | Msa1212050 | 0.812326 | 4.485964e-51 | -8.615850e-47 |
| Msa0079370 | Msa1222450 | 0.808929 | 2.432366e-50 | -8.615850e-47 |
| Msa0079370 | Msa1223870 | 0.806301 | 8.793282e-50 | -8.615850e-47 |
| Msa0079370 | Msa1224480 | 0.804541 | 2.055845e-49 | -8.615850e-47 |
| Msa0079370 | Msa1235390 | 0.804413 | 2.186239e-49 | -8.615850e-47 |
| Msa0079370 | Msa1236360 | 0.809084 | 2.253509e-50 | -8.615850e-47 |
| Msa0079370 | Msa1242300 | 0.804505 | 2.091864e-49 | -8.615850e-47 |
| Msa0079370 | Msa1259860 | 0.800831 | 1.198127e-48 | -8.615850e-47 |
| Msa0079370 | Msa1263060 | 0.802615 | 5.157034e-49 | -8.615850e-47 |
| Msa0079370 | Msa1264620 | 0.829565 | 4.793749e-55 | -8.615850e-47 |
| Msa0079370 | Msa1265280 | 0.800770 | 1.233025e-48 | -8.615850e-47 |
| Msa0079370 | Msa1270660 | 0.809116 | 2.217777e-50 | -8.615850e-47 |
| Msa0079370 | Msa1270730 | 0.816239 | 6.126532e-52 | -8.615850e-47 |
| Msa0079370 | Msa1271130 | 0.801866 | 7.355909e-49 | -8.615850e-47 |
| Msa0079370 | Msa1277690 | 0.819813 | 9.534880e-53 | -8.615850e-47 |
| Msa0079370 | Msa1291450 | 0.809654 | 1.700557e-50 | -8.615850e-47 |
| Msa0079370 | Msa1297290 | 0.801424 | 9.063858e-49 | -8.615850e-47 |
| Msa0079370 | Msa1304890 | -0.806895 | 6.586825e-50 | -8.615850e-47 |
| Msa0079370 | Msa1305350 | 0.815723 | 7.989541e-52 | -8.615850e-47 |
| Msa0079370 | Msa1305810 | 0.814599 | 1.419214e-51 | -8.615850e-47 |
| Msa0079370 | Msa1308870 | 0.822995 | 1.757846e-53 | -8.615850e-47 |
| Msa0079370 | Msa1329200 | 0.809632 | 1.718880e-50 | -8.615850e-47 |
| Msa0079370 | Msa1331000 | 0.805129 | 1.549212e-49 | -8.615850e-47 |
| Msa0079370 | Msa1331320 | 0.805464 | 1.318050e-49 | -8.615850e-47 |
| Msa0079370 | Msa1333730 | 0.814973 | 1.172612e-51 | -8.615850e-47 |
| Msa0079370 | Msa1335230 | 0.815065 | 1.118743e-51 | -8.615850e-47 |
| Msa0079370 | Msa1337480 | 0.812118 | 4.979298e-51 | -8.615850e-47 |
| Msa0079370 | Msa1338400 | 0.814891 | 1.222678e-51 | -8.615850e-47 |
| Msa0079370 | Msa1342380 | 0.820414 | 6.946972e-53 | -8.615850e-47 |
| Msa0079370 | Msa1349450 | 0.801790 | 7.624544e-49 | -8.615850e-47 |
| Msa0079370 | Msa1355180 | 0.835699 | 1.441482e-56 | -8.615850e-47 |
| Msa0079370 | Msa1355890 | 0.808580 | 2.888383e-50 | -8.615850e-47 |
| Msa0079370 | Msa1365270 | 0.808913 | 2.451323e-50 | -8.615850e-47 |
| Msa0079370 | Msa1369920 | -0.818051 | 2.397796e-52 | -8.615850e-47 |
| Msa0079370 | Msa1377080 | 0.848840 | 4.742476e-60 | -8.615850e-47 |
| Msa0079370 | Msa1378040 | 0.805265 | 1.450960e-49 | -8.615850e-47 |
| Msa0079370 | Msa1378410 | 0.830162 | 3.429550e-55 | -8.615850e-47 |
| Msa0079370 | Msa1385000 | 0.800144 | 1.653864e-48 | -8.615850e-47 |
| Msa0079370 | Msa1390020 | 0.834405 | 3.054346e-56 | -8.615850e-47 |
| Msa0079370 | Msa1390350 | 0.816721 | 4.778079e-52 | -8.615850e-47 |
| Msa0079370 | Msa1397120 | 0.803374 | 3.594628e-49 | -8.615850e-47 |
| Msa0079370 | Msa1401460 | 0.828059 | 1.109550e-54 | -8.615850e-47 |
| Msa0079370 | Msa1403890 | 0.803378 | 3.587308e-49 | -8.615850e-47 |
| Msa0079370 | Msa1406490 | 0.825024 | 5.873760e-54 | -8.615850e-47 |
| Msa0079370 | Msa1419840 | 0.833321 | 5.703664e-56 | -8.615850e-47 |
| Msa0079370 | Msa1423820 | 0.808610 | 2.846132e-50 | -8.615850e-47 |
| Msa0079370 | Msa1442920 | 0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa0079370 | Msa1458680 | 0.828315 | 9.627969e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079370 | MtrunA17_Chr1g0190341 | 98.214 | 560 | 10 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1145 |
| Msa0079370 | MtrunA17_Chr1g0190371 | 98.214 | 560 | 10 | 0 | 1 | 560 | 1 | 560 | 0.0 | 1145 |
| Msa0079370 | MtrunA17_Chr5g0395701 | 56.491 | 570 | 231 | 7 | 5 | 558 | 37 | 605 | 0.0 | 669 |
| Msa0079370 | MtrunA17_Chr4g0039581 | 55.185 | 569 | 240 | 8 | 1 | 558 | 3 | 567 | 0.0 | 654 |
| Msa0079370 | MtrunA17_Chr2g0309191 | 46.903 | 565 | 268 | 11 | 6 | 558 | 8 | 552 | 2.40e-175 | 507 |
| Msa0079370 | MtrunA17_Chr2g0310081 | 45.863 | 556 | 264 | 11 | 16 | 558 | 47 | 578 | 9.32e-171 | 496 |
| Msa0079370 | MtrunA17_Chr2g0309181 | 46.029 | 554 | 272 | 10 | 16 | 558 | 48 | 585 | 7.35e-170 | 494 |
| Msa0079370 | MtrunA17_Chr4g0074491 | 44.646 | 551 | 274 | 10 | 23 | 558 | 12 | 546 | 1.50e-162 | 474 |
| Msa0079370 | MtrunA17_Chr2g0309171 | 45.624 | 537 | 263 | 9 | 35 | 558 | 631 | 1151 | 1.05e-154 | 472 |
| Msa0079370 | MtrunA17_Chr2g0309171 | 45.591 | 533 | 260 | 9 | 35 | 554 | 14 | 529 | 1.86e-147 | 453 |
| Msa0079370 | MtrunA17_Chr2g0309131 | 42.620 | 542 | 229 | 8 | 23 | 558 | 20 | 485 | 5.89e-142 | 419 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0079370 | AT3G04350.1 | 64.685 | 572 | 185 | 7 | 1 | 560 | 1 | 567 | 0.0 | 760 |
| Msa0079370 | AT5G18490.1 | 65.009 | 543 | 173 | 7 | 22 | 560 | 24 | 553 | 0.0 | 737 |
| Msa0079370 | AT3G04350.2 | 65.607 | 535 | 170 | 6 | 35 | 560 | 16 | 545 | 0.0 | 727 |
| Msa0079370 | AT1G04090.1 | 53.899 | 577 | 244 | 9 | 1 | 560 | 1 | 572 | 0.0 | 654 |
| Msa0079370 | AT5G43950.1 | 53.578 | 573 | 242 | 9 | 1 | 558 | 1 | 564 | 0.0 | 631 |
| Msa0079370 | AT2G44260.1 | 45.956 | 544 | 266 | 9 | 23 | 558 | 29 | 552 | 6.71e-170 | 493 |
| Msa0079370 | AT2G44230.1 | 45.704 | 547 | 261 | 10 | 23 | 558 | 20 | 541 | 4.61e-169 | 491 |
| Msa0079370 | AT2G44260.2 | 45.865 | 532 | 260 | 9 | 35 | 558 | 71 | 582 | 2.35e-164 | 480 |
| Msa0079370 | AT3G01870.1 | 41.416 | 565 | 291 | 13 | 11 | 558 | 42 | 583 | 1.54e-140 | 419 |
| Msa0079370 | AT3G01880.1 | 41.273 | 550 | 287 | 12 | 23 | 558 | 62 | 589 | 1.32e-138 | 414 |
Find 191 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCATCAATGACACTTTA+AGG | 0.107306 | 1_2:-57202957 | None:intergenic |
| ACTGCGTGAATGCGTAAATT+TGG | 0.163385 | 1_2:-57203668 | None:intergenic |
| ACACTGAAAACAAAAGAATT+TGG | 0.203333 | 1_2:-57203865 | None:intergenic |
| GTAGTTACTTATAGCTTTCT+TGG | 0.219890 | 1_2:+57203973 | Msa0079370:three_prime_UTR |
| TAAACAAGTTTGAGAAAGTT+TGG | 0.235719 | 1_2:+57202008 | Msa0079370:CDS |
| CTGAGCACAGTGGAGGTAAA+TGG | 0.247800 | 1_2:+57203076 | Msa0079370:CDS |
| TTATTTCCAACAGAGCTTTC+TGG | 0.254169 | 1_2:+57203450 | Msa0079370:CDS |
| CACTTAATTACTCGTTAATA+TGG | 0.260129 | 1_2:+57202230 | Msa0079370:CDS |
| ATTCGATTTGGAGTTTATTA+AGG | 0.263278 | 1_2:+57203107 | Msa0079370:CDS |
| GACGGACCAGATTTCAAGTT+TGG | 0.298009 | 1_2:-57203774 | None:intergenic |
| AGCCAATTGTCCTTCTCCTT+TGG | 0.307063 | 1_2:-57203492 | None:intergenic |
| CGTATTGCTTGTAATGGAAT+AGG | 0.307831 | 1_2:+57204153 | Msa0079370:three_prime_UTR |
| GCGAACTCCTATTCCAAGTT+TGG | 0.314359 | 1_2:-57203208 | None:intergenic |
| TCCTTTACCATAAGAATGAT+TGG | 0.315404 | 1_2:-57203584 | None:intergenic |
| TGTCTTGATGAATAAACTAT+TGG | 0.322222 | 1_2:-57203138 | None:intergenic |
| ACAGAAAACCTAACAAATAT+TGG | 0.329471 | 1_2:-57203411 | None:intergenic |
| GATATAATGATGGTGCGTTT+TGG | 0.329648 | 1_2:+57202782 | Msa0079370:CDS |
| CATCGAACTTCTTCAACTTT+CGG | 0.340671 | 1_2:-57202352 | None:intergenic |
| TCTTCAACTTTCGGTTCATC+TGG | 0.342527 | 1_2:-57202343 | None:intergenic |
| TCCGAAAACATACCATTATT+AGG | 0.342536 | 1_2:-57203627 | None:intergenic |
| ATGGGTTAATGCATTCGATT+TGG | 0.345620 | 1_2:+57203095 | Msa0079370:CDS |
| ATGATGAATGTGTTTACTTT+TGG | 0.348745 | 1_2:+57202266 | Msa0079370:CDS |
| TCCTTCTCCTTTGGACCAGT+TGG | 0.349557 | 1_2:-57203483 | None:intergenic |
| ACATGCTTCCAATATTTGTT+AGG | 0.353415 | 1_2:+57203403 | Msa0079370:CDS |
| TCAACATTAATTACTTGTTT+CGG | 0.357438 | 1_2:-57201193 | None:intergenic |
| AATGACACTTTAAGGGTTGC+AGG | 0.360391 | 1_2:-57202949 | None:intergenic |
| CATGCTCTCATTGAGCATTA+CGG | 0.360621 | 1_2:+57202616 | Msa0079370:CDS |
| TTCATTCGTATTGCTTGTAA+TGG | 0.364694 | 1_2:+57204147 | Msa0079370:three_prime_UTR |
| GGAACAATCAGCTTGAGATT+TGG | 0.364813 | 1_2:-57202179 | None:intergenic |
| TCATCTTTCTGTCCTAATAA+TGG | 0.365027 | 1_2:+57203615 | Msa0079370:three_prime_UTR |
| GCTGGATCCAATCATTCTTA+TGG | 0.369974 | 1_2:+57203577 | Msa0079370:three_prime_UTR |
| GTTCATCAATGACACTTTAA+GGG | 0.377575 | 1_2:-57202956 | None:intergenic |
| GTATCAACTGTATGTATAGA+AGG | 0.379258 | 1_2:+57203926 | Msa0079370:three_prime_UTR |
| TCTGGTGAGGAGGGGCCAAC+TGG | 0.379305 | 1_2:+57203468 | Msa0079370:CDS |
| ATGCTCTCATTGAGCATTAC+GGG | 0.380356 | 1_2:+57202617 | Msa0079370:CDS |
| ACAAAAGAATTTGGATTGCC+TGG | 0.380958 | 1_2:-57203856 | None:intergenic |
| AACTTTCGGTTCATCTGGAT+TGG | 0.384698 | 1_2:-57202338 | None:intergenic |
| TGGAGATGCACAAATTCTAA+TGG | 0.385168 | 1_2:+57202028 | Msa0079370:CDS |
| CTGTTGGAAATAATTCAAAA+AGG | 0.390774 | 1_2:-57203440 | None:intergenic |
| AAAATTCCAAACTTGAAATC+TGG | 0.391164 | 1_2:+57203768 | Msa0079370:three_prime_UTR |
| CTGCGTGAATGCGTAAATTT+GGG | 0.393049 | 1_2:-57203667 | None:intergenic |
| AGAGGTGAAGGAAGAGAAAA+GGG | 0.395917 | 1_2:-57201431 | None:intergenic |
| AGAGTAGAGGGAGGAGGAGG+AGG | 0.395971 | 1_2:+57201256 | Msa0079370:five_prime_UTR |
| AAGAGGTGAAGGAAGAGAAA+AGG | 0.400057 | 1_2:-57201432 | None:intergenic |
| GGATCAGAGTCAGAGAATTC+TGG | 0.401520 | 1_2:-57201404 | None:intergenic |
| TAAGATAATATTATTGCTAA+AGG | 0.408489 | 1_2:+57204103 | Msa0079370:three_prime_UTR |
| TCATGCAGGGACTTACCTTC+AGG | 0.415789 | 1_2:+57203179 | Msa0079370:CDS |
| TGTGGTTGGTAAGAGATGTT+TGG | 0.416589 | 1_2:+57201353 | Msa0079370:exon |
| AAGAGAGTAGAGGGAGGAGG+AGG | 0.423853 | 1_2:+57201253 | Msa0079370:five_prime_UTR |
| AGGGTTGCAGGTCCATTGAA+TGG | 0.426014 | 1_2:-57202937 | None:intergenic |
| TCCTCGCAACGGCTGATCAT+TGG | 0.426252 | 1_2:-57202128 | None:intergenic |
| GTTCATGTAAAACCAGCATT+AGG | 0.426763 | 1_2:+57202877 | Msa0079370:CDS |
| CCGACGGCTTTATAACCCTT+TGG | 0.428360 | 1_2:-57202301 | None:intergenic |
| CTTCAGGGATCATCCAAACT+TGG | 0.432488 | 1_2:+57203195 | Msa0079370:CDS |
| CGGTGAACATGTCGGTGATT+GGG | 0.432674 | 1_2:+57202996 | Msa0079370:CDS |
| TCCAATCATTCTTATGGTAA+AGG | 0.432784 | 1_2:+57203583 | Msa0079370:three_prime_UTR |
| TCGGTGAACATGTCGGTGAT+TGG | 0.434338 | 1_2:+57202995 | Msa0079370:CDS |
| GCTCAATGAGAGCATGAATC+TGG | 0.436544 | 1_2:-57202609 | None:intergenic |
| CATATTAACGAGTAATTAAG+TGG | 0.438102 | 1_2:-57202229 | None:intergenic |
| GATACATGGCGACGATATCT+TGG | 0.440980 | 1_2:-57203908 | None:intergenic |
| GCAACTTCACCGGAGAGCTT+TGG | 0.443367 | 1_2:+57203040 | Msa0079370:CDS |
| TGTGTGGGATTTGCGATTCC+AGG | 0.445035 | 1_2:+57203838 | Msa0079370:three_prime_UTR |
| ATATTATTGCTAAAGGTTGA+TGG | 0.447274 | 1_2:+57204110 | Msa0079370:three_prime_UTR |
| TTATAACCCTTTGGAGGGTT+AGG | 0.448233 | 1_2:-57202292 | None:intergenic |
| GGATCATCCAAACTTGGAAT+AGG | 0.450282 | 1_2:+57203201 | Msa0079370:CDS |
| GATGGCATGTATTTCTCATC+AGG | 0.457793 | 1_2:-57202658 | None:intergenic |
| TGTATGTATAGAAGGGGTAT+AGG | 0.458755 | 1_2:+57203934 | Msa0079370:three_prime_UTR |
| CCCAAGGGATATTCTTCCAC+CGG | 0.460403 | 1_2:-57201966 | None:intergenic |
| TCCTCACCAGAAAGCTCTGT+TGG | 0.461764 | 1_2:-57203456 | None:intergenic |
| TATTATTGCTAAAGGTTGAT+GGG | 0.466225 | 1_2:+57204111 | Msa0079370:three_prime_UTR |
| AATACACAACCTTGCGATAG+AGG | 0.468770 | 1_2:+57202460 | Msa0079370:CDS |
| CCAAGACAGGAAAATCCATC+TGG | 0.469039 | 1_2:-57202091 | None:intergenic |
| GCATGAATCTGGTTCAGATT+CGG | 0.470765 | 1_2:-57202598 | None:intergenic |
| GAGGACACGTTCTTGTCGCT+CGG | 0.471944 | 1_2:+57202146 | Msa0079370:CDS |
| TGGATCCAGCTCATGAGAAA+TGG | 0.475127 | 1_2:-57203564 | None:intergenic |
| TGAGCACAGTGGAGGTAAAT+GGG | 0.475593 | 1_2:+57203077 | Msa0079370:CDS |
| CTTTACTGATATTGCAATGT+GGG | 0.475927 | 1_2:+57202906 | Msa0079370:CDS |
| GAAGGAAGAGAAAAGGGAAG+TGG | 0.478043 | 1_2:-57201425 | None:intergenic |
| TGCGAGAAATAATCTTAAGA+AGG | 0.480833 | 1_2:+57202828 | Msa0079370:CDS |
| GCAGGCACGTCAGTGGTCAT+TGG | 0.482146 | 1_2:+57203693 | Msa0079370:three_prime_UTR |
| ACGGCTTTATAACCCTTTGG+AGG | 0.486012 | 1_2:-57202298 | None:intergenic |
| TTTCGGTTCATCTGGATTGG+TGG | 0.487936 | 1_2:-57202335 | None:intergenic |
| ATTGTTGCTGCCGAGTATCT+TGG | 0.490221 | 1_2:+57203282 | Msa0079370:CDS |
| GTCCAAAGGAGAAGGACAAT+TGG | 0.490950 | 1_2:+57203490 | Msa0079370:CDS |
| AAACAGAATAAGAGAGTAGA+GGG | 0.491921 | 1_2:+57201244 | Msa0079370:five_prime_UTR |
| GGTGGCCATTGGATCTAGAT+TGG | 0.492908 | 1_2:-57203796 | None:intergenic |
| CGTGAATCATATACAATGGT+AGG | 0.493841 | 1_2:-57203357 | None:intergenic |
| CTCACAAACTTCTGTTAGAT+CGG | 0.493970 | 1_2:-57202383 | None:intergenic |
| ACTAGCCATTTCTCATGAGC+TGG | 0.497310 | 1_2:+57203559 | Msa0079370:three_prime_UTR |
| ATCAGCACATCGGTGGCCAT+TGG | 0.498851 | 1_2:-57203807 | None:intergenic |
| AGGACATGTATATACATTTG+TGG | 0.499083 | 1_2:+57204072 | Msa0079370:three_prime_UTR |
| GGGTTGCAGGTCCATTGAAT+GGG | 0.500640 | 1_2:-57202936 | None:intergenic |
| GCCGGTGGAAGAATATCCCT+TGG | 0.503378 | 1_2:+57201965 | Msa0079370:CDS |
| AATAAGAGAGTAGAGGGAGG+AGG | 0.505306 | 1_2:+57201250 | Msa0079370:five_prime_UTR |
| CTACTTTGATTCTGAACAAG+TGG | 0.505519 | 1_2:+57202528 | Msa0079370:CDS |
| GAGAAATGGCTAGTAGCATA+TGG | 0.508226 | 1_2:-57203550 | None:intergenic |
| CGGTGAAGTTGCTCACGCGA+AGG | 0.508371 | 1_2:-57203029 | None:intergenic |
| TTGTTCCGAGTCAGAATCCT+TGG | 0.510563 | 1_2:+57202195 | Msa0079370:CDS |
| CATGCTAGCTATCCTCATGC+AGG | 0.510869 | 1_2:+57203165 | Msa0079370:CDS |
| TACGCATTCACGCAGTCGGC+AGG | 0.512700 | 1_2:+57203675 | Msa0079370:three_prime_UTR |
| CCTTGTGGCCATTGTGGAAG+AGG | 0.512962 | 1_2:-57201449 | None:intergenic |
| CCACATTGCAATATCAGTAA+AGG | 0.513990 | 1_2:-57202905 | None:intergenic |
| TATCAACTGTATGTATAGAA+GGG | 0.523623 | 1_2:+57203927 | Msa0079370:three_prime_UTR |
| TTGGTTGCCTAACCCTCCAA+AGG | 0.523651 | 1_2:+57202285 | Msa0079370:CDS |
| GGGGTATAGGAGGTGTGCCT+TGG | 0.525597 | 1_2:+57203947 | Msa0079370:three_prime_UTR |
| AATTCTAATGGAAAGGCACT+AGG | 0.529623 | 1_2:+57202040 | Msa0079370:CDS |
| CATGCAGGGACTTACCTTCA+GGG | 0.530671 | 1_2:+57203180 | Msa0079370:CDS |
| AACAGAGCTTTCTGGTGAGG+AGG | 0.540070 | 1_2:+57203458 | Msa0079370:CDS |
| GTATACTGCGGGTAATGCAA+AGG | 0.543009 | 1_2:+57202717 | Msa0079370:CDS |
| ACAGAGCTTTCTGGTGAGGA+GGG | 0.543440 | 1_2:+57203459 | Msa0079370:CDS |
| GTAAAGGCTCCTCCTAATGC+TGG | 0.544725 | 1_2:-57202889 | None:intergenic |
| CTATACATACAGTTGATACA+TGG | 0.547754 | 1_2:-57203922 | None:intergenic |
| AGGACACGTTCTTGTCGCTC+GGG | 0.549143 | 1_2:+57202147 | Msa0079370:CDS |
| CCGGTGGAAGAATATCCCTT+GGG | 0.549609 | 1_2:+57201966 | Msa0079370:CDS |
| ACATGCCATCATCGGTGTCA+TGG | 0.551090 | 1_2:+57202671 | Msa0079370:CDS |
| AGACCTTTGGAGATTCCAGA+TGG | 0.551683 | 1_2:+57202076 | Msa0079370:CDS |
| TTCCTTCACCTCTTCCACAA+TGG | 0.552183 | 1_2:+57201441 | Msa0079370:CDS |
| GACTCCATCACCAAGATACT+CGG | 0.556847 | 1_2:-57203292 | None:intergenic |
| TTACTCGTTAATATGGTGCA+TGG | 0.557123 | 1_2:+57202237 | Msa0079370:CDS |
| CGGCTTTATAACCCTTTGGA+GGG | 0.557691 | 1_2:-57202297 | None:intergenic |
| GGTGAAGTTGCTCACGCGAA+GGG | 0.560176 | 1_2:-57203028 | None:intergenic |
| ATTATTTCTCGCATCTTCAT+CGG | 0.561997 | 1_2:-57202818 | None:intergenic |
| TCCAACAGAGCTTTCTGGTG+AGG | 0.565118 | 1_2:+57203455 | Msa0079370:CDS |
| ATGTATAGAAGGGGTATAGG+AGG | 0.567366 | 1_2:+57203937 | Msa0079370:three_prime_UTR |
| GCGAGAAATAATCTTAAGAA+GGG | 0.567421 | 1_2:+57202829 | Msa0079370:CDS |
| TTTCTCGCATCTTCATCGGT+AGG | 0.570074 | 1_2:-57202814 | None:intergenic |
| ATGCACAAATTCTAATGGAA+AGG | 0.570132 | 1_2:+57202033 | Msa0079370:CDS |
| AATTTACGCATTCACGCAGT+CGG | 0.570803 | 1_2:+57203671 | Msa0079370:three_prime_UTR |
| TATACTGCGGGTAATGCAAA+GGG | 0.571900 | 1_2:+57202718 | Msa0079370:CDS |
| CATGTAAAACCAGCATTAGG+AGG | 0.572269 | 1_2:+57202880 | Msa0079370:CDS |
| AACATTGAGATGAACAAGAT+CGG | 0.572272 | 1_2:+57202976 | Msa0079370:CDS |
| GCCATTGGATCTAGATTGGA+CGG | 0.573384 | 1_2:-57203792 | None:intergenic |
| CAGAATAAGAGAGTAGAGGG+AGG | 0.577200 | 1_2:+57201247 | Msa0079370:five_prime_UTR |
| TGGTTGCCTAACCCTCCAAA+GGG | 0.582899 | 1_2:+57202286 | Msa0079370:CDS |
| CTTCGCGTGAGCAACTTCAC+CGG | 0.582952 | 1_2:+57203030 | Msa0079370:CDS |
| TGCTGATAGTGTGAATGTGT+GGG | 0.584824 | 1_2:+57203823 | Msa0079370:three_prime_UTR |
| TCCAATGATCAGCCGTTGCG+AGG | 0.585934 | 1_2:+57202127 | Msa0079370:CDS |
| TCCGTCCAATCTAGATCCAA+TGG | 0.588195 | 1_2:+57203791 | Msa0079370:three_prime_UTR |
| AAAACAGAATAAGAGAGTAG+AGG | 0.588580 | 1_2:+57201243 | Msa0079370:five_prime_UTR |
| GCCAACTGGTCCAAAGGAGA+AGG | 0.588714 | 1_2:+57203482 | Msa0079370:CDS |
| GGTGGTAACTATTATGCCGA+CGG | 0.591499 | 1_2:-57202317 | None:intergenic |
| GTGGCAGTAGTAACCAAGAC+AGG | 0.592567 | 1_2:-57202104 | None:intergenic |
| AAGGTTGTGTATTCCAAACC+TGG | 0.594362 | 1_2:-57202450 | None:intergenic |
| AATCCATCTGGAATCTCCAA+AGG | 0.594832 | 1_2:-57202079 | None:intergenic |
| ATAATACCTTGTGGCCATTG+TGG | 0.596330 | 1_2:-57201455 | None:intergenic |
| CTCATATATTGCAACCAACA+TGG | 0.598495 | 1_2:-57203324 | None:intergenic |
| AAGAGCCAAGGATTCTGACT+CGG | 0.598761 | 1_2:-57202200 | None:intergenic |
| CCTCTTCCACAATGGCCACA+AGG | 0.602749 | 1_2:+57201449 | Msa0079370:CDS |
| GGCACAAATTTACCTGGTGG+AGG | 0.603301 | 1_2:+57202760 | Msa0079370:CDS |
| CATTGAGCATTACGGGCCAA+CGG | 0.604760 | 1_2:+57202624 | Msa0079370:CDS |
| CTATAAGTAACTACTATCCA+AGG | 0.605011 | 1_2:-57203964 | None:intergenic |
| TGAGAAATACATGCCATCAT+CGG | 0.607689 | 1_2:+57202663 | Msa0079370:CDS |
| GTGAATCATATACAATGGTA+GGG | 0.607790 | 1_2:-57203356 | None:intergenic |
| CTAGCTAGAGGTGTATCTGT+CGG | 0.607900 | 1_2:+57202487 | Msa0079370:CDS |
| GTGCTGATAGTGTGAATGTG+TGG | 0.608069 | 1_2:+57203822 | Msa0079370:three_prime_UTR |
| TAATGGAATAGGAATGTGCT+TGG | 0.609971 | 1_2:+57204164 | Msa0079370:three_prime_UTR |
| TATCACGGCACAAATTTACC+TGG | 0.610377 | 1_2:+57202754 | Msa0079370:CDS |
| AAGGAGAAGGACAATTGGCT+AGG | 0.611868 | 1_2:+57203495 | Msa0079370:CDS |
| TAGTTTATTCATCAAGACAT+GGG | 0.614112 | 1_2:+57203142 | Msa0079370:CDS |
| CCAAAGGGTTATAAAGCCGT+CGG | 0.615266 | 1_2:+57202301 | Msa0079370:CDS |
| GGAGGGGCCAACTGGTCCAA+AGG | 0.615580 | 1_2:+57203476 | Msa0079370:CDS |
| CCTGGTGGAGGATATAATGA+TGG | 0.615594 | 1_2:+57202772 | Msa0079370:CDS |
| TCAGGATGAAAATATACCGT+TGG | 0.617396 | 1_2:-57202640 | None:intergenic |
| CAAGTTTGGATGATCCCTGA+AGG | 0.618933 | 1_2:-57203194 | None:intergenic |
| GGTAAAGCTATAGATTATCA+CGG | 0.619614 | 1_2:+57202739 | Msa0079370:CDS |
| CCTTTACTGATATTGCAATG+TGG | 0.624376 | 1_2:+57202905 | Msa0079370:CDS |
| CACGGCACAAATTTACCTGG+TGG | 0.625316 | 1_2:+57202757 | Msa0079370:CDS |
| CCATCATTATATCCTCCACC+AGG | 0.627153 | 1_2:-57202772 | None:intergenic |
| GGCCATTGTGGAAGAGGTGA+AGG | 0.627997 | 1_2:-57201443 | None:intergenic |
| GCTGCCGAGTATCTTGGTGA+TGG | 0.635810 | 1_2:+57203288 | Msa0079370:CDS |
| GAAGGGAAACATAGAGAGTG+CGG | 0.636222 | 1_2:+57202846 | Msa0079370:CDS |
| TGAAGGTAAGTCCCTGCATG+AGG | 0.636865 | 1_2:-57203177 | None:intergenic |
| ATAGTTTATTCATCAAGACA+TGG | 0.637290 | 1_2:+57203141 | Msa0079370:CDS |
| ACAAGAACGTGTCCTCGCAA+CGG | 0.637737 | 1_2:-57202139 | None:intergenic |
| ATCAACTGTATGTATAGAAG+GGG | 0.638480 | 1_2:+57203928 | Msa0079370:three_prime_UTR |
| GTTGCAATATATGAGAGAGT+GGG | 0.639341 | 1_2:+57203332 | Msa0079370:CDS |
| GGTTGCAATATATGAGAGAG+TGG | 0.644082 | 1_2:+57203331 | Msa0079370:CDS |
| TCTGTCGGAACATTCTTCTG+TGG | 0.649136 | 1_2:+57202502 | Msa0079370:CDS |
| AACAAGATCGGTGAACATGT+CGG | 0.653405 | 1_2:+57202988 | Msa0079370:CDS |
| CACTTGTTCAGAATCAAAGT+AGG | 0.653816 | 1_2:-57202527 | None:intergenic |
| AGAACGTGAATCATATACAA+TGG | 0.654517 | 1_2:-57203361 | None:intergenic |
| GCTAGCATACCTCTATCGCA+AGG | 0.655324 | 1_2:-57202469 | None:intergenic |
| ATGCTAGCTATCCTCATGCA+GGG | 0.655682 | 1_2:+57203166 | Msa0079370:CDS |
| CAGAGCTTTCTGGTGAGGAG+GGG | 0.657357 | 1_2:+57203460 | Msa0079370:CDS |
| GCAACGGCTGATCATTGGAG+TGG | 0.664542 | 1_2:-57202123 | None:intergenic |
| GAGTCATTACAGAACCATGT+TGG | 0.666649 | 1_2:+57203310 | Msa0079370:CDS |
| TTGCAATATATGAGAGAGTG+GGG | 0.667593 | 1_2:+57203333 | Msa0079370:CDS |
| TCACACTATCAGCACATCGG+TGG | 0.667805 | 1_2:-57203814 | None:intergenic |
| GATAGAGGTATGCTAGCTAG+AGG | 0.685865 | 1_2:+57202475 | Msa0079370:CDS |
| GCAGTCGGCAGGCACGTCAG+TGG | 0.703576 | 1_2:+57203686 | Msa0079370:three_prime_UTR |
| CATTCACACTATCAGCACAT+CGG | 0.717511 | 1_2:-57203817 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAATAATAGAAAAA+GGG | - | chr1_2:57201491-57201510 | None:intergenic | 10.0% |
| !! | AAGAAAAAAATAATAGAAAA+AGG | - | chr1_2:57201492-57201511 | None:intergenic | 10.0% |
| !!! | TTTTTAACTAACATAAACAT+TGG | - | chr1_2:57204026-57204045 | None:intergenic | 15.0% |
| !! | TAAGATAATATTATTGCTAA+AGG | + | chr1_2:57204103-57204122 | Msa0079370:three_prime_UTR | 15.0% |
| !! | AAAAATAATAGAAAAAGGGA+AGG | - | chr1_2:57201487-57201506 | None:intergenic | 20.0% |
| !!! | ATATTTGTGCTGTTTTTTAT+TGG | + | chr1_2:57201634-57201653 | Msa0079370:intron | 20.0% |
| !!! | AATACTATTTGATTTCGTTT+TGG | + | chr1_2:57201844-57201863 | Msa0079370:intron | 20.0% |
| !!! | TGCTAAAAGTAATTTTATTC+TGG | + | chr1_2:57203239-57203258 | Msa0079370:CDS | 20.0% |
| !!! | TTTGAGTTGATGATTAAAAC+AGG | - | chr1_2:57201538-57201557 | None:intergenic | 25.0% |
| !! | TTACTGTGTTCTTTCTATTT+TGG | + | chr1_2:57201575-57201594 | Msa0079370:intron | 25.0% |
| !! | GGTATTACTGTGATTAATTT+TGG | + | chr1_2:57201655-57201674 | Msa0079370:intron | 25.0% |
| !!! | GTAGTATTTTTTGCAGATAT+TGG | + | chr1_2:57201683-57201702 | Msa0079370:intron | 25.0% |
| !! | CTTTATTGCATATTTTGCTA+TGG | + | chr1_2:57201768-57201787 | Msa0079370:intron | 25.0% |
| !!! | TTTGATTTCGTTTTGGTTAT+TGG | + | chr1_2:57201851-57201870 | Msa0079370:intron | 25.0% |
| ! | TAAACAAGTTTGAGAAAGTT+TGG | + | chr1_2:57202008-57202027 | Msa0079370:CDS | 25.0% |
| !! | TTTCACATTTTATAGACCTT+TGG | + | chr1_2:57202063-57202082 | Msa0079370:CDS | 25.0% |
| ! | CATATTAACGAGTAATTAAG+TGG | - | chr1_2:57202232-57202251 | None:intergenic | 25.0% |
| ! | CACTTAATTACTCGTTAATA+TGG | + | chr1_2:57202230-57202249 | Msa0079370:CDS | 25.0% |
| !! | ATGATGAATGTGTTTACTTT+TGG | + | chr1_2:57202266-57202285 | Msa0079370:CDS | 25.0% |
| !!! | ATTCGATTTGGAGTTTATTA+AGG | + | chr1_2:57203107-57203126 | Msa0079370:CDS | 25.0% |
| ! | TGTCTTGATGAATAAACTAT+TGG | - | chr1_2:57203141-57203160 | None:intergenic | 25.0% |
| ! | ATAGTTTATTCATCAAGACA+TGG | + | chr1_2:57203141-57203160 | Msa0079370:CDS | 25.0% |
| ! | TAGTTTATTCATCAAGACAT+GGG | + | chr1_2:57203142-57203161 | Msa0079370:CDS | 25.0% |
| ! | ACAGAAAACCTAACAAATAT+TGG | - | chr1_2:57203414-57203433 | None:intergenic | 25.0% |
| !!! | AATATTTGTTAGGTTTTCTG+TGG | + | chr1_2:57203413-57203432 | Msa0079370:CDS | 25.0% |
| ! | CTGTTGGAAATAATTCAAAA+AGG | - | chr1_2:57203443-57203462 | None:intergenic | 25.0% |
| !! | TCCTAATAATGGTATGTTTT+CGG | + | chr1_2:57203626-57203645 | Msa0079370:three_prime_UTR | 25.0% |
| !!! | TATGTTTTCGGATTTTGATT+TGG | + | chr1_2:57203638-57203657 | Msa0079370:three_prime_UTR | 25.0% |
| !!! | AGCAAACAGATTTTGATTTT+TGG | + | chr1_2:57203738-57203757 | Msa0079370:three_prime_UTR | 25.0% |
| ! | AAAATTCCAAACTTGAAATC+TGG | + | chr1_2:57203768-57203787 | Msa0079370:three_prime_UTR | 25.0% |
| ! | ACACTGAAAACAAAAGAATT+TGG | - | chr1_2:57203868-57203887 | None:intergenic | 25.0% |
| ! | TATCAACTGTATGTATAGAA+GGG | + | chr1_2:57203927-57203946 | Msa0079370:three_prime_UTR | 25.0% |
| ! | GTATAATTACGCAAAAACTT+AGG | + | chr1_2:57204052-57204071 | Msa0079370:three_prime_UTR | 25.0% |
| ! | ATATTATTGCTAAAGGTTGA+TGG | + | chr1_2:57204110-57204129 | Msa0079370:three_prime_UTR | 25.0% |
| !! | TATTATTGCTAAAGGTTGAT+GGG | + | chr1_2:57204111-57204130 | Msa0079370:three_prime_UTR | 25.0% |
| AAAACAGAATAAGAGAGTAG+AGG | + | chr1_2:57201243-57201262 | Msa0079370:five_prime_UTR | 30.0% | |
| AAACAGAATAAGAGAGTAGA+GGG | + | chr1_2:57201244-57201263 | Msa0079370:five_prime_UTR | 30.0% | |
| !! | AGGTTGATAATAATACCTTG+TGG | - | chr1_2:57201467-57201486 | None:intergenic | 30.0% |
| !! | TGTAACTTGTATTTTCCCAA+GGG | - | chr1_2:57201984-57202003 | None:intergenic | 30.0% |
| !! | TTGTAACTTGTATTTTCCCA+AGG | - | chr1_2:57201985-57202004 | None:intergenic | 30.0% |
| ATGCACAAATTCTAATGGAA+AGG | + | chr1_2:57202033-57202052 | Msa0079370:CDS | 30.0% | |
| GTCAAAGAAAAATTCTTTCC+AGG | + | chr1_2:57202432-57202451 | Msa0079370:CDS | 30.0% | |
| AGAAAAATTCTTTCCAGGTT+TGG | + | chr1_2:57202437-57202456 | Msa0079370:CDS | 30.0% | |
| GGTAAAGCTATAGATTATCA+CGG | + | chr1_2:57202739-57202758 | Msa0079370:CDS | 30.0% | |
| ! | ATTATTTCTCGCATCTTCAT+CGG | - | chr1_2:57202821-57202840 | None:intergenic | 30.0% |
| TGCGAGAAATAATCTTAAGA+AGG | + | chr1_2:57202828-57202847 | Msa0079370:CDS | 30.0% | |
| GCGAGAAATAATCTTAAGAA+GGG | + | chr1_2:57202829-57202848 | Msa0079370:CDS | 30.0% | |
| CTTTACTGATATTGCAATGT+GGG | + | chr1_2:57202906-57202925 | Msa0079370:CDS | 30.0% | |
| GTTCATCAATGACACTTTAA+GGG | - | chr1_2:57202959-57202978 | None:intergenic | 30.0% | |
| TGTTCATCAATGACACTTTA+AGG | - | chr1_2:57202960-57202979 | None:intergenic | 30.0% | |
| AACATTGAGATGAACAAGAT+CGG | + | chr1_2:57202976-57202995 | Msa0079370:CDS | 30.0% | |
| GTGAATCATATACAATGGTA+GGG | - | chr1_2:57203359-57203378 | None:intergenic | 30.0% | |
| AGAACGTGAATCATATACAA+TGG | - | chr1_2:57203364-57203383 | None:intergenic | 30.0% | |
| ACATGCTTCCAATATTTGTT+AGG | + | chr1_2:57203403-57203422 | Msa0079370:CDS | 30.0% | |
| TCCAATCATTCTTATGGTAA+AGG | + | chr1_2:57203583-57203602 | Msa0079370:three_prime_UTR | 30.0% | |
| TCCTTTACCATAAGAATGAT+TGG | - | chr1_2:57203587-57203606 | None:intergenic | 30.0% | |
| TCATCTTTCTGTCCTAATAA+TGG | + | chr1_2:57203615-57203634 | Msa0079370:three_prime_UTR | 30.0% | |
| TCCGAAAACATACCATTATT+AGG | - | chr1_2:57203630-57203649 | None:intergenic | 30.0% | |
| ! | CTATACATACAGTTGATACA+TGG | - | chr1_2:57203925-57203944 | None:intergenic | 30.0% |
| GTATCAACTGTATGTATAGA+AGG | + | chr1_2:57203926-57203945 | Msa0079370:three_prime_UTR | 30.0% | |
| ATCAACTGTATGTATAGAAG+GGG | + | chr1_2:57203928-57203947 | Msa0079370:three_prime_UTR | 30.0% | |
| CTATAAGTAACTACTATCCA+AGG | - | chr1_2:57203967-57203986 | None:intergenic | 30.0% | |
| GTAGTTACTTATAGCTTTCT+TGG | + | chr1_2:57203973-57203992 | Msa0079370:three_prime_UTR | 30.0% | |
| AGGACATGTATATACATTTG+TGG | + | chr1_2:57204072-57204091 | Msa0079370:three_prime_UTR | 30.0% | |
| TTCATTCGTATTGCTTGTAA+TGG | + | chr1_2:57204147-57204166 | Msa0079370:three_prime_UTR | 30.0% | |
| !!! | TTGGTTTTGAGTGTTCTTGT+TGG | + | chr1_2:57201372-57201391 | Msa0079370:CDS | 35.0% |
| !!! | TGGTTTTGAGTGTTCTTGTT+GGG | + | chr1_2:57201373-57201392 | Msa0079370:CDS | 35.0% |
| TGGAGATGCACAAATTCTAA+TGG | + | chr1_2:57202028-57202047 | Msa0079370:CDS | 35.0% | |
| !! | AATTCTAATGGAAAGGCACT+AGG | + | chr1_2:57202040-57202059 | Msa0079370:CDS | 35.0% |
| TTACTCGTTAATATGGTGCA+TGG | + | chr1_2:57202237-57202256 | Msa0079370:CDS | 35.0% | |
| CATCGAACTTCTTCAACTTT+CGG | - | chr1_2:57202355-57202374 | None:intergenic | 35.0% | |
| CTCACAAACTTCTGTTAGAT+CGG | - | chr1_2:57202386-57202405 | None:intergenic | 35.0% | |
| CACTTGTTCAGAATCAAAGT+AGG | - | chr1_2:57202530-57202549 | None:intergenic | 35.0% | |
| CTACTTTGATTCTGAACAAG+TGG | + | chr1_2:57202528-57202547 | Msa0079370:CDS | 35.0% | |
| TCAGGATGAAAATATACCGT+TGG | - | chr1_2:57202643-57202662 | None:intergenic | 35.0% | |
| TGAGAAATACATGCCATCAT+CGG | + | chr1_2:57202663-57202682 | Msa0079370:CDS | 35.0% | |
| !!! | GTGTCATGGTTTTTCAAGAA+TGG | + | chr1_2:57202685-57202704 | Msa0079370:CDS | 35.0% |
| ! | TGGAGCAATTTTGTATACTG+CGG | + | chr1_2:57202705-57202724 | Msa0079370:CDS | 35.0% |
| !! | GATATAATGATGGTGCGTTT+TGG | + | chr1_2:57202782-57202801 | Msa0079370:CDS | 35.0% |
| GTTCATGTAAAACCAGCATT+AGG | + | chr1_2:57202877-57202896 | Msa0079370:CDS | 35.0% | |
| CCACATTGCAATATCAGTAA+AGG | - | chr1_2:57202908-57202927 | None:intergenic | 35.0% | |
| CCTTTACTGATATTGCAATG+TGG | + | chr1_2:57202905-57202924 | Msa0079370:CDS | 35.0% | |
| ! | ATGGGTTAATGCATTCGATT+TGG | + | chr1_2:57203095-57203114 | Msa0079370:CDS | 35.0% |
| CTCATATATTGCAACCAACA+TGG | - | chr1_2:57203327-57203346 | None:intergenic | 35.0% | |
| GTTGCAATATATGAGAGAGT+GGG | + | chr1_2:57203332-57203351 | Msa0079370:CDS | 35.0% | |
| TTGCAATATATGAGAGAGTG+GGG | + | chr1_2:57203333-57203352 | Msa0079370:CDS | 35.0% | |
| CGTGAATCATATACAATGGT+AGG | - | chr1_2:57203360-57203379 | None:intergenic | 35.0% | |
| TTATTTCCAACAGAGCTTTC+TGG | + | chr1_2:57203450-57203469 | Msa0079370:CDS | 35.0% | |
| ACAAAAGAATTTGGATTGCC+TGG | - | chr1_2:57203859-57203878 | None:intergenic | 35.0% | |
| !! | TGTTTTCAGTGTGTCATTGA+TGG | + | chr1_2:57203876-57203895 | Msa0079370:three_prime_UTR | 35.0% |
| ! | TGTATGTATAGAAGGGGTAT+AGG | + | chr1_2:57203934-57203953 | Msa0079370:three_prime_UTR | 35.0% |
| ! | CGTATTGCTTGTAATGGAAT+AGG | + | chr1_2:57204153-57204172 | Msa0079370:three_prime_UTR | 35.0% |
| TAATGGAATAGGAATGTGCT+TGG | + | chr1_2:57204164-57204183 | Msa0079370:three_prime_UTR | 35.0% | |
| !! | TGTGGTTGGTAAGAGATGTT+TGG | + | chr1_2:57201353-57201372 | Msa0079370:exon | 40.0% |
| AGAGGTGAAGGAAGAGAAAA+GGG | - | chr1_2:57201434-57201453 | None:intergenic | 40.0% | |
| AAGAGGTGAAGGAAGAGAAA+AGG | - | chr1_2:57201435-57201454 | None:intergenic | 40.0% | |
| ATAATACCTTGTGGCCATTG+TGG | - | chr1_2:57201458-57201477 | None:intergenic | 40.0% | |
| AGTTTGTGAGTGATCTACTC+AGG | + | chr1_2:57201932-57201951 | Msa0079370:intron | 40.0% | |
| ! | AATCCATCTGGAATCTCCAA+AGG | - | chr1_2:57202082-57202101 | None:intergenic | 40.0% |
| GGAACAATCAGCTTGAGATT+TGG | - | chr1_2:57202182-57202201 | None:intergenic | 40.0% | |
| !! | AAGTGGCTTTTTAAGAGCCA+AGG | - | chr1_2:57202215-57202234 | None:intergenic | 40.0% |
| ! | TTATAACCCTTTGGAGGGTT+AGG | - | chr1_2:57202295-57202314 | None:intergenic | 40.0% |
| AACTTTCGGTTCATCTGGAT+TGG | - | chr1_2:57202341-57202360 | None:intergenic | 40.0% | |
| TCTTCAACTTTCGGTTCATC+TGG | - | chr1_2:57202346-57202365 | None:intergenic | 40.0% | |
| AAGGTTGTGTATTCCAAACC+TGG | - | chr1_2:57202453-57202472 | None:intergenic | 40.0% | |
| AATACACAACCTTGCGATAG+AGG | + | chr1_2:57202460-57202479 | Msa0079370:CDS | 40.0% | |
| ! | GCATGAATCTGGTTCAGATT+CGG | - | chr1_2:57202601-57202620 | None:intergenic | 40.0% |
| CATGCTCTCATTGAGCATTA+CGG | + | chr1_2:57202616-57202635 | Msa0079370:CDS | 40.0% | |
| ATGCTCTCATTGAGCATTAC+GGG | + | chr1_2:57202617-57202636 | Msa0079370:CDS | 40.0% | |
| GATGGCATGTATTTCTCATC+AGG | - | chr1_2:57202661-57202680 | None:intergenic | 40.0% | |
| AAAAACCATGACACCGATGA+TGG | - | chr1_2:57202679-57202698 | None:intergenic | 40.0% | |
| ! | GGAGCAATTTTGTATACTGC+GGG | + | chr1_2:57202706-57202725 | Msa0079370:CDS | 40.0% |
| TATACTGCGGGTAATGCAAA+GGG | + | chr1_2:57202718-57202737 | Msa0079370:CDS | 40.0% | |
| TATCACGGCACAAATTTACC+TGG | + | chr1_2:57202754-57202773 | Msa0079370:CDS | 40.0% | |
| CATGTAAAACCAGCATTAGG+AGG | + | chr1_2:57202880-57202899 | Msa0079370:CDS | 40.0% | |
| !!! | TGGGTTTTTTGCCCATTCAA+TGG | + | chr1_2:57202925-57202944 | Msa0079370:CDS | 40.0% |
| ! | AATGACACTTTAAGGGTTGC+AGG | - | chr1_2:57202952-57202971 | None:intergenic | 40.0% |
| AACAAGATCGGTGAACATGT+CGG | + | chr1_2:57202988-57203007 | Msa0079370:CDS | 40.0% | |
| AAAAACAGACCAAAGCTCTC+CGG | - | chr1_2:57203052-57203071 | None:intergenic | 40.0% | |
| !!! | GTTTTTTTCTCTGAGCACAG+TGG | + | chr1_2:57203066-57203085 | Msa0079370:CDS | 40.0% |
| GGATCATCCAAACTTGGAAT+AGG | + | chr1_2:57203201-57203220 | Msa0079370:CDS | 40.0% | |
| GAGTCATTACAGAACCATGT+TGG | + | chr1_2:57203310-57203329 | Msa0079370:CDS | 40.0% | |
| GGTTGCAATATATGAGAGAG+TGG | + | chr1_2:57203331-57203350 | Msa0079370:CDS | 40.0% | |
| GAGAAATGGCTAGTAGCATA+TGG | - | chr1_2:57203553-57203572 | None:intergenic | 40.0% | |
| GCTGGATCCAATCATTCTTA+TGG | + | chr1_2:57203577-57203596 | Msa0079370:three_prime_UTR | 40.0% | |
| CTGCGTGAATGCGTAAATTT+GGG | - | chr1_2:57203670-57203689 | None:intergenic | 40.0% | |
| ACTGCGTGAATGCGTAAATT+TGG | - | chr1_2:57203671-57203690 | None:intergenic | 40.0% | |
| AATTTACGCATTCACGCAGT+CGG | + | chr1_2:57203671-57203690 | Msa0079370:three_prime_UTR | 40.0% | |
| CATTCACACTATCAGCACAT+CGG | - | chr1_2:57203820-57203839 | None:intergenic | 40.0% | |
| ! | TGCTGATAGTGTGAATGTGT+GGG | + | chr1_2:57203823-57203842 | Msa0079370:three_prime_UTR | 40.0% |
| ! | ATGTATAGAAGGGGTATAGG+AGG | + | chr1_2:57203937-57203956 | Msa0079370:three_prime_UTR | 40.0% |
| CAGAATAAGAGAGTAGAGGG+AGG | + | chr1_2:57201247-57201266 | Msa0079370:five_prime_UTR | 45.0% | |
| AATAAGAGAGTAGAGGGAGG+AGG | + | chr1_2:57201250-57201269 | Msa0079370:five_prime_UTR | 45.0% | |
| GAGAGAGAGAGAGAGAAGAA+GGG | - | chr1_2:57201328-57201347 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAAGA+AGG | - | chr1_2:57201329-57201348 | None:intergenic | 45.0% | |
| ! | CTCTCTCTCTCTCTCTTTTG+TGG | + | chr1_2:57201335-57201354 | Msa0079370:five_prime_UTR | 45.0% |
| ! | CTCTCTCTCTCTTTTGTGGT+TGG | + | chr1_2:57201339-57201358 | Msa0079370:five_prime_UTR | 45.0% |
| GGATCAGAGTCAGAGAATTC+TGG | - | chr1_2:57201407-57201426 | None:intergenic | 45.0% | |
| GAAGGAAGAGAAAAGGGAAG+TGG | - | chr1_2:57201428-57201447 | None:intergenic | 45.0% | |
| TTCCTTCACCTCTTCCACAA+TGG | + | chr1_2:57201441-57201460 | Msa0079370:CDS | 45.0% | |
| TTGTGAGTGATCTACTCAGG+TGG | + | chr1_2:57201935-57201954 | Msa0079370:intron | 45.0% | |
| ! | AGACCTTTGGAGATTCCAGA+TGG | + | chr1_2:57202076-57202095 | Msa0079370:CDS | 45.0% |
| CCAAGACAGGAAAATCCATC+TGG | - | chr1_2:57202094-57202113 | None:intergenic | 45.0% | |
| !! | CCAGATGGATTTTCCTGTCT+TGG | + | chr1_2:57202091-57202110 | Msa0079370:CDS | 45.0% |
| TTGTTCCGAGTCAGAATCCT+TGG | + | chr1_2:57202195-57202214 | Msa0079370:CDS | 45.0% | |
| AAGAGCCAAGGATTCTGACT+CGG | - | chr1_2:57202203-57202222 | None:intergenic | 45.0% | |
| ! | CGGCTTTATAACCCTTTGGA+GGG | - | chr1_2:57202300-57202319 | None:intergenic | 45.0% |
| ! | ACGGCTTTATAACCCTTTGG+AGG | - | chr1_2:57202301-57202320 | None:intergenic | 45.0% |
| CCAAAGGGTTATAAAGCCGT+CGG | + | chr1_2:57202301-57202320 | Msa0079370:CDS | 45.0% | |
| GGTGGTAACTATTATGCCGA+CGG | - | chr1_2:57202320-57202339 | None:intergenic | 45.0% | |
| ! | TTTCGGTTCATCTGGATTGG+TGG | - | chr1_2:57202338-57202357 | None:intergenic | 45.0% |
| ! | GATAGAGGTATGCTAGCTAG+AGG | + | chr1_2:57202475-57202494 | Msa0079370:CDS | 45.0% |
| ! | CTAGCTAGAGGTGTATCTGT+CGG | + | chr1_2:57202487-57202506 | Msa0079370:CDS | 45.0% |
| TCTGTCGGAACATTCTTCTG+TGG | + | chr1_2:57202502-57202521 | Msa0079370:CDS | 45.0% | |
| ! | GCTCAATGAGAGCATGAATC+TGG | - | chr1_2:57202612-57202631 | None:intergenic | 45.0% |
| GTATACTGCGGGTAATGCAA+AGG | + | chr1_2:57202717-57202736 | Msa0079370:CDS | 45.0% | |
| CCATCATTATATCCTCCACC+AGG | - | chr1_2:57202775-57202794 | None:intergenic | 45.0% | |
| CCTGGTGGAGGATATAATGA+TGG | + | chr1_2:57202772-57202791 | Msa0079370:CDS | 45.0% | |
| TTTCTCGCATCTTCATCGGT+AGG | - | chr1_2:57202817-57202836 | None:intergenic | 45.0% | |
| GAAGGGAAACATAGAGAGTG+CGG | + | chr1_2:57202846-57202865 | Msa0079370:CDS | 45.0% | |
| ! | TTTTTCTCTGAGCACAGTGG+AGG | + | chr1_2:57203069-57203088 | Msa0079370:CDS | 45.0% |
| TGAGCACAGTGGAGGTAAAT+GGG | + | chr1_2:57203077-57203096 | Msa0079370:CDS | 45.0% | |
| ATGCTAGCTATCCTCATGCA+GGG | + | chr1_2:57203166-57203185 | Msa0079370:CDS | 45.0% | |
| CAAGTTTGGATGATCCCTGA+AGG | - | chr1_2:57203197-57203216 | None:intergenic | 45.0% | |
| CTTCAGGGATCATCCAAACT+TGG | + | chr1_2:57203195-57203214 | Msa0079370:CDS | 45.0% | |
| GCGAACTCCTATTCCAAGTT+TGG | - | chr1_2:57203211-57203230 | None:intergenic | 45.0% | |
| ATTGTTGCTGCCGAGTATCT+TGG | + | chr1_2:57203282-57203301 | Msa0079370:CDS | 45.0% | |
| GACTCCATCACCAAGATACT+CGG | - | chr1_2:57203295-57203314 | None:intergenic | 45.0% | |
| GTCCAAAGGAGAAGGACAAT+TGG | + | chr1_2:57203490-57203509 | Msa0079370:CDS | 45.0% | |
| AGCCAATTGTCCTTCTCCTT+TGG | - | chr1_2:57203495-57203514 | None:intergenic | 45.0% | |
| AAGGAGAAGGACAATTGGCT+AGG | + | chr1_2:57203495-57203514 | Msa0079370:CDS | 45.0% | |
| ACTAGCCATTTCTCATGAGC+TGG | + | chr1_2:57203559-57203578 | Msa0079370:three_prime_UTR | 45.0% | |
| TGGATCCAGCTCATGAGAAA+TGG | - | chr1_2:57203567-57203586 | None:intergenic | 45.0% | |
| !! | GACGGACCAGATTTCAAGTT+TGG | - | chr1_2:57203777-57203796 | None:intergenic | 45.0% |
| TCCGTCCAATCTAGATCCAA+TGG | + | chr1_2:57203791-57203810 | Msa0079370:three_prime_UTR | 45.0% | |
| GCCATTGGATCTAGATTGGA+CGG | - | chr1_2:57203795-57203814 | None:intergenic | 45.0% | |
| ! | GTGCTGATAGTGTGAATGTG+TGG | + | chr1_2:57203822-57203841 | Msa0079370:three_prime_UTR | 45.0% |
| GATACATGGCGACGATATCT+TGG | - | chr1_2:57203911-57203930 | None:intergenic | 45.0% | |
| TGAGTGATCTACTCAGGTGG+TGG | + | chr1_2:57201938-57201957 | Msa0079370:intron | 50.0% | |
| !! | TACTCAGGTGGTGGTTTTGC+CGG | + | chr1_2:57201947-57201966 | Msa0079370:intron | 50.0% |
| CCCAAGGGATATTCTTCCAC+CGG | - | chr1_2:57201969-57201988 | None:intergenic | 50.0% | |
| CCGGTGGAAGAATATCCCTT+GGG | + | chr1_2:57201966-57201985 | Msa0079370:CDS | 50.0% | |
| GTGGCAGTAGTAACCAAGAC+AGG | - | chr1_2:57202107-57202126 | None:intergenic | 50.0% | |
| ACAAGAACGTGTCCTCGCAA+CGG | - | chr1_2:57202142-57202161 | None:intergenic | 50.0% | |
| TTGGTTGCCTAACCCTCCAA+AGG | + | chr1_2:57202285-57202304 | Msa0079370:CDS | 50.0% | |
| TGGTTGCCTAACCCTCCAAA+GGG | + | chr1_2:57202286-57202305 | Msa0079370:CDS | 50.0% | |
| ! | CCGACGGCTTTATAACCCTT+TGG | - | chr1_2:57202304-57202323 | None:intergenic | 50.0% |
| GCTAGCATACCTCTATCGCA+AGG | - | chr1_2:57202472-57202491 | None:intergenic | 50.0% | |
| CATTGAGCATTACGGGCCAA+CGG | + | chr1_2:57202624-57202643 | Msa0079370:CDS | 50.0% | |
| !! | ACATGCCATCATCGGTGTCA+TGG | + | chr1_2:57202671-57202690 | Msa0079370:CDS | 50.0% |
| CACGGCACAAATTTACCTGG+TGG | + | chr1_2:57202757-57202776 | Msa0079370:CDS | 50.0% | |
| GGCACAAATTTACCTGGTGG+AGG | + | chr1_2:57202760-57202779 | Msa0079370:CDS | 50.0% | |
| GTAAAGGCTCCTCCTAATGC+TGG | - | chr1_2:57202892-57202911 | None:intergenic | 50.0% | |
| GGGTTGCAGGTCCATTGAAT+GGG | - | chr1_2:57202939-57202958 | None:intergenic | 50.0% | |
| AGGGTTGCAGGTCCATTGAA+TGG | - | chr1_2:57202940-57202959 | None:intergenic | 50.0% | |
| TCGGTGAACATGTCGGTGAT+TGG | + | chr1_2:57202995-57203014 | Msa0079370:CDS | 50.0% | |
| CGGTGAACATGTCGGTGATT+GGG | + | chr1_2:57202996-57203015 | Msa0079370:CDS | 50.0% | |
| CTGAGCACAGTGGAGGTAAA+TGG | + | chr1_2:57203076-57203095 | Msa0079370:CDS | 50.0% | |
| CATGCTAGCTATCCTCATGC+AGG | + | chr1_2:57203165-57203184 | Msa0079370:CDS | 50.0% | |
| TGAAGGTAAGTCCCTGCATG+AGG | - | chr1_2:57203180-57203199 | None:intergenic | 50.0% | |
| TCATGCAGGGACTTACCTTC+AGG | + | chr1_2:57203179-57203198 | Msa0079370:CDS | 50.0% | |
| CATGCAGGGACTTACCTTCA+GGG | + | chr1_2:57203180-57203199 | Msa0079370:CDS | 50.0% | |
| ! | TCCAACAGAGCTTTCTGGTG+AGG | + | chr1_2:57203455-57203474 | Msa0079370:CDS | 50.0% |
| TCCTCACCAGAAAGCTCTGT+TGG | - | chr1_2:57203459-57203478 | None:intergenic | 50.0% | |
| ! | AACAGAGCTTTCTGGTGAGG+AGG | + | chr1_2:57203458-57203477 | Msa0079370:CDS | 50.0% |
| ! | ACAGAGCTTTCTGGTGAGGA+GGG | + | chr1_2:57203459-57203478 | Msa0079370:CDS | 50.0% |
| TCCTTCTCCTTTGGACCAGT+TGG | - | chr1_2:57203486-57203505 | None:intergenic | 50.0% | |
| GGTGGCCATTGGATCTAGAT+TGG | - | chr1_2:57203799-57203818 | None:intergenic | 50.0% | |
| TCACACTATCAGCACATCGG+TGG | - | chr1_2:57203817-57203836 | None:intergenic | 50.0% | |
| TGTGTGGGATTTGCGATTCC+AGG | + | chr1_2:57203838-57203857 | Msa0079370:three_prime_UTR | 50.0% | |
| AAGAGAGTAGAGGGAGGAGG+AGG | + | chr1_2:57201253-57201272 | Msa0079370:five_prime_UTR | 55.0% | |
| GGCCATTGTGGAAGAGGTGA+AGG | - | chr1_2:57201446-57201465 | None:intergenic | 55.0% | |
| CCTTGTGGCCATTGTGGAAG+AGG | - | chr1_2:57201452-57201471 | None:intergenic | 55.0% | |
| CCTCTTCCACAATGGCCACA+AGG | + | chr1_2:57201449-57201468 | Msa0079370:CDS | 55.0% | |
| GCCGGTGGAAGAATATCCCT+TGG | + | chr1_2:57201965-57201984 | Msa0079370:CDS | 55.0% | |
| GCAACGGCTGATCATTGGAG+TGG | - | chr1_2:57202126-57202145 | None:intergenic | 55.0% | |
| TCCAATGATCAGCCGTTGCG+AGG | + | chr1_2:57202127-57202146 | Msa0079370:CDS | 55.0% | |
| TCCTCGCAACGGCTGATCAT+TGG | - | chr1_2:57202131-57202150 | None:intergenic | 55.0% | |
| GAGGACACGTTCTTGTCGCT+CGG | + | chr1_2:57202146-57202165 | Msa0079370:CDS | 55.0% | |
| AGGACACGTTCTTGTCGCTC+GGG | + | chr1_2:57202147-57202166 | Msa0079370:CDS | 55.0% | |
| GGTGAAGTTGCTCACGCGAA+GGG | - | chr1_2:57203031-57203050 | None:intergenic | 55.0% | |
| CTTCGCGTGAGCAACTTCAC+CGG | + | chr1_2:57203030-57203049 | Msa0079370:CDS | 55.0% | |
| GCAACTTCACCGGAGAGCTT+TGG | + | chr1_2:57203040-57203059 | Msa0079370:CDS | 55.0% | |
| GCTGCCGAGTATCTTGGTGA+TGG | + | chr1_2:57203288-57203307 | Msa0079370:CDS | 55.0% | |
| ! | CAGAGCTTTCTGGTGAGGAG+GGG | + | chr1_2:57203460-57203479 | Msa0079370:CDS | 55.0% |
| GCCAACTGGTCCAAAGGAGA+AGG | + | chr1_2:57203482-57203501 | Msa0079370:CDS | 55.0% | |
| ATCAGCACATCGGTGGCCAT+TGG | - | chr1_2:57203810-57203829 | None:intergenic | 55.0% | |
| AGAGTAGAGGGAGGAGGAGG+AGG | + | chr1_2:57201256-57201275 | Msa0079370:five_prime_UTR | 60.0% | |
| !! | TCAGGTGGTGGTTTTGCCGG+TGG | + | chr1_2:57201950-57201969 | Msa0079370:intron | 60.0% |
| CGGTGAAGTTGCTCACGCGA+AGG | - | chr1_2:57203032-57203051 | None:intergenic | 60.0% | |
| TACGCATTCACGCAGTCGGC+AGG | + | chr1_2:57203675-57203694 | Msa0079370:three_prime_UTR | 60.0% | |
| GCAGGCACGTCAGTGGTCAT+TGG | + | chr1_2:57203693-57203712 | Msa0079370:three_prime_UTR | 60.0% | |
| ! | GGGGTATAGGAGGTGTGCCT+TGG | + | chr1_2:57203947-57203966 | Msa0079370:three_prime_UTR | 60.0% |
| TCTGGTGAGGAGGGGCCAAC+TGG | + | chr1_2:57203468-57203487 | Msa0079370:CDS | 65.0% | |
| GGAGGGGCCAACTGGTCCAA+AGG | + | chr1_2:57203476-57203495 | Msa0079370:CDS | 65.0% | |
| GCAGTCGGCAGGCACGTCAG+TGG | + | chr1_2:57203686-57203705 | Msa0079370:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 57201194 | 57204219 | 57201194 | ID=Msa0079370;Name=Msa0079370 |
| chr1_2 | mRNA | 57201194 | 57204219 | 57201194 | ID=Msa0079370-mRNA-1;Parent=Msa0079370;Name=Msa0079370-mRNA-1;_AED=0.01;_eAED=0.01;_QI=174|1|1|1|1|1|2|686|560 |
| chr1_2 | exon | 57201194 | 57201470 | 57201194 | ID=Msa0079370-mRNA-1:exon:18036;Parent=Msa0079370-mRNA-1 |
| chr1_2 | exon | 57201954 | 57204219 | 57201954 | ID=Msa0079370-mRNA-1:exon:18037;Parent=Msa0079370-mRNA-1 |
| chr1_2 | five_prime_UTR | 57201194 | 57201367 | 57201194 | ID=Msa0079370-mRNA-1:five_prime_utr;Parent=Msa0079370-mRNA-1 |
| chr1_2 | CDS | 57201368 | 57201470 | 57201368 | ID=Msa0079370-mRNA-1:cds;Parent=Msa0079370-mRNA-1 |
| chr1_2 | CDS | 57201954 | 57203533 | 57201954 | ID=Msa0079370-mRNA-1:cds;Parent=Msa0079370-mRNA-1 |
| chr1_2 | three_prime_UTR | 57203534 | 57204219 | 57203534 | ID=Msa0079370-mRNA-1:three_prime_utr;Parent=Msa0079370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
