AlfalfaGEDB | Msa0616870

M. sativa cultivar zhongmu-4 / Msa0616870

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0616870	XP_024629538.1	96.016	251	9	1	44	294	1	250	2.50e-172	486

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0616870	sp\|Q8GYK7\|Y5285_ARATH	59.414	239	94	2	59	294	16	254	2.61e-97	289

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0616870	G7L823	94.737	247	12	1	44	290	1	246	4.14e-154	442

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0020390	Msa0616870	-0.816196	6.264872e-52	-8.615850e-47
Msa0615580	Msa0616870	-0.845650	3.558362e-59	-8.615850e-47
Msa0616870	Msa0664560	-0.802925	4.450797e-49	-8.615850e-47
Msa0616870	Msa0672550	-0.800434	1.443907e-48	-8.615850e-47
Msa0616870	Msa0675000	-0.803398	3.553186e-49	-8.615850e-47
Msa0616870	Msa0698780	-0.806836	6.779380e-50	-8.615850e-47
Msa0616870	Msa0800370	-0.816503	5.346597e-52	-8.615850e-47
Msa0616870	Msa0892640	-0.808903	2.464268e-50	-8.615850e-47
Msa0616870	Msa0974950	-0.800934	1.141667e-48	-8.615850e-47
Msa0616870	Msa1021520	-0.818084	2.357267e-52	-8.615850e-47
Msa0616870	Msa1060260	-0.820040	8.463473e-53	-8.615850e-47
Msa0616870	Msa1104210	-0.800164	1.638329e-48	-8.615850e-47
Msa0616870	Msa1122310	0.804871	1.754297e-49	-8.615850e-47
Msa0616870	Msa1126830	-0.805406	1.355433e-49	-8.615850e-47
Msa0616870	Msa1165780	-0.832152	1.112547e-55	-8.615850e-47
Msa0616870	Msa1206270	-0.819793	9.636523e-53	-8.615850e-47
Msa0616870	Msa1206290	-0.814645	1.386723e-51	-8.615850e-47
Msa0616870	Msa1254730	-0.834874	2.328386e-56	-8.615850e-47
Msa0616870	Msa1262890	-0.806353	8.570448e-50	-8.615850e-47
Msa0616870	Msa1294820	-0.802626	5.129951e-49	-8.615850e-47
Msa0616870	Msa1315890	-0.808303	3.309200e-50	-8.615850e-47
Msa0616870	Msa1332590	-0.829217	5.825880e-55	-8.615850e-47
Msa0616870	Msa1336560	-0.816440	5.523017e-52	-8.615850e-47
Msa0616870	Msa1351540	-0.837074	6.439734e-57	-8.615850e-47
Msa0616870	Msa1365800	-0.806278	8.891578e-50	-8.615850e-47
Msa0616870	Msa1368530	-0.804438	2.160602e-49	-8.615850e-47
Msa0616870	Msa1374830	-0.806900	6.570689e-50	-8.615850e-47
Msa0616870	Msa1435390	-0.804279	2.331233e-49	-8.615850e-47
Msa0616870	Msa1454680	-0.823524	1.322682e-53	-8.615850e-47
Msa0616870	Msa1458090	-0.836427	9.419418e-57	-8.615850e-47
Msa0188350	Msa0616870	-0.821324	4.289126e-53	-8.615850e-47
Msa0204960	Msa0616870	-0.804488	2.108730e-49	-8.615850e-47
Msa0231100	Msa0616870	-0.815807	7.650865e-52	-8.615850e-47
Msa0385500	Msa0616870	-0.809056	2.284543e-50	-8.615850e-47
Msa0437020	Msa0616870	-0.801178	1.017631e-48	-8.615850e-47
Msa0443390	Msa0616870	-0.812894	3.369672e-51	-8.615850e-47
Msa0445330	Msa0616870	-0.837806	4.182482e-57	-8.615850e-47
Msa0450400	Msa0616870	0.825060	5.758246e-54	-8.615850e-47
Msa0450480	Msa0616870	-0.801162	1.025509e-48	-8.615850e-47
Msa0469620	Msa0616870	0.814872	1.234529e-51	-8.615850e-47
Msa0249580	Msa0616870	-0.800146	1.652693e-48	-8.615850e-47
Msa0257490	Msa0616870	-0.812469	4.173103e-51	-8.615850e-47
Msa0265430	Msa0616870	-0.824114	9.618713e-54	-8.615850e-47
Msa0275360	Msa0616870	-0.801663	8.098092e-49	-8.615850e-47
Msa0281530	Msa0616870	-0.825674	4.122233e-54	-8.615850e-47
Msa0295460	Msa0616870	0.813515	2.462055e-51	-8.615850e-47
Msa0320590	Msa0616870	-0.809401	1.926753e-50	-8.615850e-47
Msa0326480	Msa0616870	-0.801633	8.212162e-49	-8.615850e-47
Msa0340380	Msa0616870	-0.813244	2.824094e-51	-8.615850e-47
Msa0357900	Msa0616870	-0.822391	2.428607e-53	-8.615850e-47
Msa0531650	Msa0616870	-0.821820	3.295468e-53	-8.615850e-47
Msa0534900	Msa0616870	-0.801129	1.041343e-48	-8.615850e-47
Msa0540550	Msa0616870	-0.800766	1.235514e-48	-8.615850e-47
Msa0581110	Msa0616870	-0.804154	2.474811e-49	-8.615850e-47
Msa0588260	Msa0616870	-0.814502	1.491104e-51	-8.615850e-47
Msa0588360	Msa0616870	-0.820428	6.895767e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0616870	MtrunA17_Chr8g0380241	42.056	107	48	3	44	149	1	94	2.19e-19	81.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0616870	AT5G14285.1	59.414	239	94	2	59	294	16	254	2.66e-98	289
Msa0616870	AT3G25950.1	49.789	237	112	4	57	288	15	249	5.99e-72	222
Msa0616870	AT3G27270.1	47.083	240	120	3	59	294	13	249	1.95e-68	213
Msa0616870	AT3G27270.2	47.083	240	120	3	59	294	13	249	3.56e-68	213

Find 115 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTATCAATGCTAACTATAAA+TGG	0.169863	4_2:+67134852	None:intergenic
ACCATTCTAAACACAAAGTA+TGG	0.187286	4_2:+67135072	None:intergenic
CTACGTGGATTTGGGTTTCT+TGG	0.194477	4_2:-67135011	Msa0616870:CDS
AGAAAGTTTATGGATGAAAA+AGG	0.197294	4_2:+67135684	None:intergenic
TATGCTAGCGGGCTTGCTTA+TGG	0.231439	4_2:-67135042	Msa0616870:CDS
CTTCCACTCAAGAATTGATA+TGG	0.264948	4_2:-67134779	Msa0616870:three_prime_UTR
ATTCCTCAGGGACATGGATT+TGG	0.269232	4_2:+67133710	None:intergenic
ATGCTAGCGGGCTTGCTTAT+GGG	0.278734	4_2:-67135041	Msa0616870:CDS
TTATCATATTGATTGCAATT+TGG	0.287169	4_2:-67134691	Msa0616870:three_prime_UTR
GGCTTGTGCCTACGTGGATT+TGG	0.302504	4_2:-67135020	Msa0616870:CDS
TTCCTTTCAATTTACCTAAT+CGG	0.303847	4_2:-67135573	Msa0616870:CDS
TTTGTGTTTGTGTGAGGGTT+TGG	0.305498	4_2:+67135752	None:intergenic
ATCAAGGTATTCCTGCAAAA+TGG	0.312692	4_2:+67134322	None:intergenic
GTGGTGGTTATTTCAGCTAT+TGG	0.317693	4_2:-67134985	Msa0616870:CDS
TTGTGTTTGTGTGAGGGTTT+GGG	0.333510	4_2:+67135753	None:intergenic
GGCACACCCGCCGCAATCTT+CGG	0.358514	4_2:-67135474	Msa0616870:CDS
GCATAGTCTTCTCTTATATA+TGG	0.366269	4_2:-67133484	Msa0616870:three_prime_UTR
GATTAAACAGCTGGAGAATT+CGG	0.368706	4_2:+67135509	None:intergenic
AATGATTTGGTATTGTATAA+TGG	0.374243	4_2:-67133451	Msa0616870:three_prime_UTR
TTCCCGGAGCTGCCATGATT+TGG	0.378030	4_2:+67133805	None:intergenic
AGGGAAGCGAAGCCGCTGTT+GGG	0.383271	4_2:+67135429	None:intergenic
CATCCTGTATCGCTCGCTAT+AGG	0.390582	4_2:-67134278	Msa0616870:intron
GGACGCTCACCGGTGCTTGC+CGG	0.391009	4_2:-67135182	Msa0616870:CDS
GCTTGTGCCTACGTGGATTT+GGG	0.392366	4_2:-67135019	Msa0616870:CDS
TGTTTAATCTCCCTCTTTCA+CGG	0.393105	4_2:-67135495	Msa0616870:CDS
CAAAATGGAAAAGATGTGAT+AGG	0.394125	4_2:+67134337	None:intergenic
CTCATTAGTGAAAGAAGAAC+TGG	0.397378	4_2:-67134925	Msa0616870:CDS
AATCACCTCATGGCCTGTTC+AGG	0.397525	4_2:+67133543	None:intergenic
CCCATACTTTGTGTTTAGAA+TGG	0.397857	4_2:-67135073	Msa0616870:CDS
AATGTGATTGAGAAAGTTTA+TGG	0.400068	4_2:+67135674	None:intergenic
CACTCTTGATGGCAAATGTT+TGG	0.402979	4_2:-67134507	Msa0616870:three_prime_UTR
TGCATGCATTTAGAACTTCC+CGG	0.411150	4_2:+67133789	None:intergenic
TACGTGGATTTGGGTTTCTT+GGG	0.411670	4_2:-67135010	Msa0616870:CDS
GTGGTTCAATTTGAAGCATT+AGG	0.413067	4_2:-67133429	None:intergenic
AGGAAAATCGCTTCGCCGCT+AGG	0.414084	4_2:-67135158	Msa0616870:CDS
TATTCTTCTTCCACCAAGAT+TGG	0.414783	4_2:-67135620	Msa0616870:CDS
TATGAGACTCACGCCTGAAC+AGG	0.420164	4_2:-67133556	Msa0616870:three_prime_UTR
ATCTTGAAAATGTACAATAG+TGG	0.420748	4_2:-67134574	Msa0616870:three_prime_UTR
GCTGTTGGGGTCGGAGAAGA+TGG	0.421410	4_2:+67135443	None:intergenic
ATTAAAAGTTACTTTAACAT+AGG	0.422131	4_2:+67133617	None:intergenic
AAGAACTGGTGCAAAATTAG+AGG	0.425702	4_2:-67134911	Msa0616870:CDS
TTCTATTGTGAGGGGATTTG+TGG	0.428689	4_2:-67135097	Msa0616870:CDS
AAACCTATAGCGAGCGATAC+AGG	0.432297	4_2:+67134275	None:intergenic
ATAGAATACAACACGTAAAA+CGG	0.433592	4_2:+67135114	None:intergenic
TCTATTGTGAGGGGATTTGT+GGG	0.439025	4_2:-67135096	Msa0616870:CDS
CGGCGGGTGTGCCGTGAAAG+AGG	0.443733	4_2:+67135484	None:intergenic
ATGGGAAAACTAACCAATCT+TGG	0.444941	4_2:+67135607	None:intergenic
CTACCAAATCATGGCAGCTC+CGG	0.445702	4_2:-67133808	Msa0616870:three_prime_UTR
CGATGAAGAGAACGTCGCTT+GGG	0.452772	4_2:+67135325	None:intergenic
TTGGGTTTCTTGGGCTGTGG+TGG	0.455719	4_2:-67135001	Msa0616870:CDS
TCTTGAAAATGTACAATAGT+GGG	0.461096	4_2:-67134573	Msa0616870:three_prime_UTR
CGTGTTGTATTCTATTGTGA+GGG	0.461748	4_2:-67135106	Msa0616870:CDS
CTCTTATATATGGTGTATGT+TGG	0.463970	4_2:-67133474	Msa0616870:three_prime_UTR
GCGATGAAGAGAACGTCGCT+TGG	0.466322	4_2:+67135324	None:intergenic
AGAGAATGGAGTAACCGATT+AGG	0.466707	4_2:+67135559	None:intergenic
TGAACAATGTTAACTATCAA+TGG	0.467602	4_2:+67134805	None:intergenic
TGGTGTATGTTGGAATGATT+TGG	0.470820	4_2:-67133464	Msa0616870:three_prime_UTR
TATCAATGCTAACTATAAAT+GGG	0.470933	4_2:+67134853	None:intergenic
GAGGGAAGCGAAGCCGCTGT+TGG	0.475399	4_2:+67135428	None:intergenic
ATCAATGGTTACAACAGTAC+AGG	0.480755	4_2:+67134820	None:intergenic
CCAGCGCTTGTCAGAATACA+TGG	0.481080	4_2:-67135203	Msa0616870:CDS
AAAATGGAAAAGATGTGATA+GGG	0.493704	4_2:+67134338	None:intergenic
TGCCGTCACGTCGTTTCTCA+TGG	0.494565	4_2:-67135267	Msa0616870:CDS
CTCACTCAAATTTCACATGT+AGG	0.495491	4_2:+67134540	None:intergenic
AAATTAACAAGGTTCATTCA+AGG	0.498581	4_2:-67133736	Msa0616870:three_prime_UTR
AAAGAGGGAGATTAAACAGC+TGG	0.500050	4_2:+67135500	None:intergenic
TTTGTGGGTATACACTCGTT+GGG	0.509457	4_2:-67134953	Msa0616870:CDS
TACCAAATCATGGCAGCTCC+GGG	0.512416	4_2:-67133807	Msa0616870:three_prime_UTR
GATTTGGGTTTCTTGGGCTG+TGG	0.524093	4_2:-67135004	Msa0616870:CDS
TTTCTGGAAAGCGGTGTTGA+GGG	0.525576	4_2:+67135410	None:intergenic
AGCGAAGCCGCTGTTGGGGT+CGG	0.528984	4_2:+67135434	None:intergenic
AATCTGATTTGATTTGAATG+TGG	0.538608	4_2:-67134645	Msa0616870:three_prime_UTR
ACGTGTTGTATTCTATTGTG+AGG	0.538921	4_2:-67135107	Msa0616870:CDS
GGAAAATCGCTTCGCCGCTA+GGG	0.544751	4_2:-67135157	Msa0616870:CDS
TTCACATTAAAATAACAACT+TGG	0.550719	4_2:+67134364	None:intergenic
GGAAAACTAACCAATCTTGG+TGG	0.553344	4_2:+67135610	None:intergenic
CAGAATACATGGACGCTCAC+CGG	0.556900	4_2:-67135192	Msa0616870:CDS
GCCATGAGGTGATTTGTCTC+CGG	0.557123	4_2:-67133534	Msa0616870:three_prime_UTR
ATGGCGCCGAAGATTGCGGC+GGG	0.565482	4_2:+67135468	None:intergenic
CCATGTATTCTGACAAGCGC+TGG	0.569670	4_2:+67135203	None:intergenic
CTGAGGAATGAAAATAATTG+TGG	0.576503	4_2:-67133696	Msa0616870:three_prime_UTR
GGAGATGGCGCCGAAGATTG+CGG	0.579772	4_2:+67135464	None:intergenic
AGTTACTTTAACATAGGACA+TGG	0.581231	4_2:+67133623	None:intergenic
AAATGGAAAAGATGTGATAG+GGG	0.581590	4_2:+67134339	None:intergenic
CGCCATGAGAAACGACGTGA+CGG	0.582635	4_2:+67135265	None:intergenic
GGCGGGTGTGCCGTGAAAGA+GGG	0.587089	4_2:+67135485	None:intergenic
AACCGATTAGGTAAATTGAA+AGG	0.589561	4_2:+67135571	None:intergenic
CTTATGGGCTTGTGCCTACG+TGG	0.601583	4_2:-67135026	Msa0616870:CDS
GATTTGGTATTGTATAATGG+TGG	0.601910	4_2:-67133448	Msa0616870:three_prime_UTR
GGGAAGCGAAGCCGCTGTTG+GGG	0.604760	4_2:+67135430	None:intergenic
GTGTTGTATTCTATTGTGAG+GGG	0.606630	4_2:-67135105	Msa0616870:CDS
AAACCATATCAATTCTTGAG+TGG	0.607531	4_2:+67134776	None:intergenic
CTTACATCACATAAGTTCAC+CGG	0.617481	4_2:+67133515	None:intergenic
GCTCACCGGTGCTTGCCGGA+AGG	0.618449	4_2:-67135178	Msa0616870:CDS
CCATTCTAAACACAAAGTAT+GGG	0.618771	4_2:+67135073	None:intergenic
AACGACGTAGTGTAATAGAT+CGG	0.625871	4_2:+67135353	None:intergenic
ACCGGAGACAAATCACCTCA+TGG	0.626123	4_2:+67133533	None:intergenic
AGCGATGCTGTAATCAAGAA+CGG	0.627277	4_2:+67135386	None:intergenic
GAGAACAAGCAAAACGACGA+CGG	0.631112	4_2:+67135236	None:intergenic
AGTTATTGAAGAAATTAACA+AGG	0.632748	4_2:-67133747	Msa0616870:three_prime_UTR
GATTTCAACATCAGATACAA+TGG	0.633551	4_2:+67134594	None:intergenic
ATCTTCTCCGACCCCAACAG+CGG	0.637267	4_2:-67135441	Msa0616870:CDS
CTTGAAAATGTACAATAGTG+GGG	0.637634	4_2:-67134572	Msa0616870:three_prime_UTR
GATGGCGCCGAAGATTGCGG+CGG	0.640340	4_2:+67135467	None:intergenic
GGGGTCGGAGAAGATGGAGA+TGG	0.642155	4_2:+67135449	None:intergenic
AACAGCTGGAGAATTCGGAT+CGG	0.642303	4_2:+67135514	None:intergenic
TCAATGGTTACAACAGTACA+GGG	0.645354	4_2:+67134821	None:intergenic
AAAACAACACTAGCAACAAG+AGG	0.645678	4_2:+67133836	None:intergenic
AAACAACACTAGCAACAAGA+GGG	0.676115	4_2:+67133837	None:intergenic
CAAGAAACCCAAATCCACGT+AGG	0.695620	4_2:+67135012	None:intergenic
TCACGCCTGAACAGGCCATG+AGG	0.697505	4_2:-67133548	Msa0616870:three_prime_UTR
CGTGACGATAACGAAAAGCG+TGG	0.719084	4_2:+67135290	None:intergenic
CAGAACATCGTAAACCCTAG+CGG	0.744153	4_2:+67135143	None:intergenic
TTTCCAAATCCATGTCCCTG+AGG	0.744208	4_2:-67133713	Msa0616870:three_prime_UTR
GAATACAACACGTAAAACGG+CGG	0.746815	4_2:+67135117	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATAAGGATATAATAAAAC+AGG	+	chr4_2:67135287-67135306	None:intergenic	15.0%
!!!	ATTAAAAGTTACTTTAACAT+AGG	+	chr4_2:67135575-67135594	None:intergenic	15.0%
!!	AAATAAGGATATAATAAAAC+AGG	+	chr4_2:67135287-67135306	None:intergenic	15.0%
!!!	ATTAAAAGTTACTTTAACAT+AGG	+	chr4_2:67135575-67135594	None:intergenic	15.0%
!!	ATTAGAGGAAAAAATTAGAT+AGG	-	chr4_2:67134293-67134312	Msa0616870:three_prime_UTR	20.0%
!!	TTAGAGGAAAAAATTAGATA+GGG	-	chr4_2:67134294-67134313	Msa0616870:three_prime_UTR	20.0%
!!	TATCAATGCTAACTATAAAT+GGG	+	chr4_2:67134339-67134358	None:intergenic	20.0%
!!	TTATCAATGCTAACTATAAA+TGG	+	chr4_2:67134340-67134359	None:intergenic	20.0%
!!!	TTATCATATTGATTGCAATT+TGG	-	chr4_2:67134498-67134517	Msa0616870:three_prime_UTR	20.0%
!!	TTCACATTAAAATAACAACT+TGG	+	chr4_2:67134828-67134847	None:intergenic	20.0%
!!	CTATAAACTTAACGAATATA+AGG	+	chr4_2:67135043-67135062	None:intergenic	20.0%
!!	AGTTATTGAAGAAATTAACA+AGG	-	chr4_2:67135442-67135461	Msa0616870:CDS	20.0%
!!!	AATGATTTGGTATTGTATAA+TGG	-	chr4_2:67135738-67135757	Msa0616870:CDS	20.0%
!!	ATTAGAGGAAAAAATTAGAT+AGG	-	chr4_2:67134293-67134312	Msa0616870:three_prime_UTR	20.0%
!!	TTAGAGGAAAAAATTAGATA+GGG	-	chr4_2:67134294-67134313	Msa0616870:three_prime_UTR	20.0%
!!	TATCAATGCTAACTATAAAT+GGG	+	chr4_2:67134339-67134358	None:intergenic	20.0%
!!	TTATCAATGCTAACTATAAA+TGG	+	chr4_2:67134340-67134359	None:intergenic	20.0%
!!!	TTATCATATTGATTGCAATT+TGG	-	chr4_2:67134498-67134517	Msa0616870:three_prime_UTR	20.0%
!!	TTCACATTAAAATAACAACT+TGG	+	chr4_2:67134828-67134847	None:intergenic	20.0%
!!	CTATAAACTTAACGAATATA+AGG	+	chr4_2:67135043-67135062	None:intergenic	20.0%
!!	AGTTATTGAAGAAATTAACA+AGG	-	chr4_2:67135442-67135461	Msa0616870:CDS	20.0%
!!!	AATGATTTGGTATTGTATAA+TGG	-	chr4_2:67135738-67135757	Msa0616870:CDS	20.0%
!	GAAAGTTTATGGATGAAAAA+GGG	+	chr4_2:67133507-67133526	None:intergenic	25.0%
!	AGAAAGTTTATGGATGAAAA+AGG	+	chr4_2:67133508-67133527	None:intergenic	25.0%
!	AATGTGATTGAGAAAGTTTA+TGG	+	chr4_2:67133518-67133537	None:intergenic	25.0%
!	AAAGGAAGAAGAAGAAAAAT+GGG	+	chr4_2:67133603-67133622	None:intergenic	25.0%
!	TTCCTTTCAATTTACCTAAT+CGG	-	chr4_2:67133616-67133635	Msa0616870:three_prime_UTR	25.0%
!	ATAGAATACAACACGTAAAA+CGG	+	chr4_2:67134078-67134097	None:intergenic	25.0%
!!!	TATTGGTGTTAGTATTTTGT+GGG	-	chr4_2:67134221-67134240	Msa0616870:intron	25.0%
!	TGAACAATGTTAACTATCAA+TGG	+	chr4_2:67134387-67134406	None:intergenic	25.0%
!!!	AAGAATTGATATGGTTTTGT+TGG	-	chr4_2:67134419-67134438	Msa0616870:three_prime_UTR	25.0%
!!!	ACAATCTTTTTTGCATGTTT+TGG	-	chr4_2:67134475-67134494	Msa0616870:three_prime_UTR	25.0%
!!!	AATCTGATTTGATTTGAATG+TGG	-	chr4_2:67134544-67134563	Msa0616870:three_prime_UTR	25.0%
!	ATCTTGAAAATGTACAATAG+TGG	-	chr4_2:67134615-67134634	Msa0616870:three_prime_UTR	25.0%
!	TCTTGAAAATGTACAATAGT+GGG	-	chr4_2:67134616-67134635	Msa0616870:three_prime_UTR	25.0%
!	AAAATGGAAAAGATGTGATA+GGG	+	chr4_2:67134854-67134873	None:intergenic	25.0%
!	CTTGATATAGCAAAAACATA+CGG	-	chr4_2:67134884-67134903	Msa0616870:exon	25.0%
!	ATCCAAATTCAATCAAAAGA+GGG	+	chr4_2:67134950-67134969	None:intergenic	25.0%
!!!	TCTTTTGATTGAATTTGGAT+GGG	-	chr4_2:67134950-67134969	Msa0616870:CDS	25.0%
!!!	TTTTAATTTGCTATTAGCTC+AGG	-	chr4_2:67135175-67135194	Msa0616870:CDS	25.0%
!	AAATTAACAAGGTTCATTCA+AGG	-	chr4_2:67135453-67135472	Msa0616870:CDS	25.0%
!!	ACAATTATTTTCATTCCTCA+GGG	+	chr4_2:67135494-67135513	None:intergenic	25.0%
!	GAAAGTTTATGGATGAAAAA+GGG	+	chr4_2:67133507-67133526	None:intergenic	25.0%
!	AGAAAGTTTATGGATGAAAA+AGG	+	chr4_2:67133508-67133527	None:intergenic	25.0%
!	AATGTGATTGAGAAAGTTTA+TGG	+	chr4_2:67133518-67133537	None:intergenic	25.0%
!	AAAGGAAGAAGAAGAAAAAT+GGG	+	chr4_2:67133603-67133622	None:intergenic	25.0%
!	TTCCTTTCAATTTACCTAAT+CGG	-	chr4_2:67133616-67133635	Msa0616870:three_prime_UTR	25.0%
!	ATAGAATACAACACGTAAAA+CGG	+	chr4_2:67134078-67134097	None:intergenic	25.0%
!!!	TATTGGTGTTAGTATTTTGT+GGG	-	chr4_2:67134221-67134240	Msa0616870:intron	25.0%
!	TGAACAATGTTAACTATCAA+TGG	+	chr4_2:67134387-67134406	None:intergenic	25.0%
!!!	AAGAATTGATATGGTTTTGT+TGG	-	chr4_2:67134419-67134438	Msa0616870:three_prime_UTR	25.0%
!!!	ACAATCTTTTTTGCATGTTT+TGG	-	chr4_2:67134475-67134494	Msa0616870:three_prime_UTR	25.0%
!!!	AATCTGATTTGATTTGAATG+TGG	-	chr4_2:67134544-67134563	Msa0616870:three_prime_UTR	25.0%
!	ATCTTGAAAATGTACAATAG+TGG	-	chr4_2:67134615-67134634	Msa0616870:three_prime_UTR	25.0%
!	TCTTGAAAATGTACAATAGT+GGG	-	chr4_2:67134616-67134635	Msa0616870:three_prime_UTR	25.0%
!	AAAATGGAAAAGATGTGATA+GGG	+	chr4_2:67134854-67134873	None:intergenic	25.0%
!	CTTGATATAGCAAAAACATA+CGG	-	chr4_2:67134884-67134903	Msa0616870:exon	25.0%
!	ATCCAAATTCAATCAAAAGA+GGG	+	chr4_2:67134950-67134969	None:intergenic	25.0%
!!!	TCTTTTGATTGAATTTGGAT+GGG	-	chr4_2:67134950-67134969	Msa0616870:CDS	25.0%
!!!	TTTTAATTTGCTATTAGCTC+AGG	-	chr4_2:67135175-67135194	Msa0616870:CDS	25.0%
!	AAATTAACAAGGTTCATTCA+AGG	-	chr4_2:67135453-67135472	Msa0616870:CDS	25.0%
!!	ACAATTATTTTCATTCCTCA+GGG	+	chr4_2:67135494-67135513	None:intergenic	25.0%
!	TGATTTTTGTGTTTGTGTGA+GGG	+	chr4_2:67133445-67133464	None:intergenic	30.0%
!!!	TGGATGAAAAAGGGTTTTTT+GGG	+	chr4_2:67133498-67133517	None:intergenic	30.0%
!!!	ATGGATGAAAAAGGGTTTTT+TGG	+	chr4_2:67133499-67133518	None:intergenic	30.0%
	GAAAGGAAGAAGAAGAAAAA+TGG	+	chr4_2:67133604-67133623	None:intergenic	30.0%
	AACCGATTAGGTAAATTGAA+AGG	+	chr4_2:67133621-67133640	None:intergenic	30.0%
!!!	GGATTTTAGGGTTTTTGTTA+CGG	+	chr4_2:67133657-67133676	None:intergenic	30.0%
	CCATTCTAAACACAAAGTAT+GGG	+	chr4_2:67134119-67134138	None:intergenic	30.0%
	ACCATTCTAAACACAAAGTA+TGG	+	chr4_2:67134120-67134139	None:intergenic	30.0%
!!!	CTATTGGTGTTAGTATTTTG+TGG	-	chr4_2:67134220-67134239	Msa0616870:intron	30.0%
	AAACCATATCAATTCTTGAG+TGG	+	chr4_2:67134416-67134435	None:intergenic	30.0%
	GATTTCAACATCAGATACAA+TGG	+	chr4_2:67134598-67134617	None:intergenic	30.0%
	CTTGAAAATGTACAATAGTG+GGG	-	chr4_2:67134617-67134636	Msa0616870:three_prime_UTR	30.0%
	AAATGGAAAAGATGTGATAG+GGG	+	chr4_2:67134853-67134872	None:intergenic	30.0%
	CAAAATGGAAAAGATGTGAT+AGG	+	chr4_2:67134855-67134874	None:intergenic	30.0%
!!	CGTATGTTTTTGCTATATCA+AGG	+	chr4_2:67134886-67134905	None:intergenic	30.0%
	AAATTCAATCAAAAGAGGGA+GGG	+	chr4_2:67134946-67134965	None:intergenic	30.0%
	CATCCAAATTCAATCAAAAG+AGG	+	chr4_2:67134951-67134970	None:intergenic	30.0%
!!	CTCTTTTGATTGAATTTGGA+TGG	-	chr4_2:67134949-67134968	Msa0616870:CDS	30.0%
	TGTTGTTACATGAGTTCAAT+TGG	-	chr4_2:67135132-67135151	Msa0616870:CDS	30.0%
!!!	TTGTTGCTAGTGTTGTTTTT+GGG	-	chr4_2:67135357-67135376	Msa0616870:CDS	30.0%
!	CACAATTATTTTCATTCCTC+AGG	+	chr4_2:67135495-67135514	None:intergenic	30.0%
	CTGAGGAATGAAAATAATTG+TGG	-	chr4_2:67135493-67135512	Msa0616870:CDS	30.0%
!	AGTTACTTTAACATAGGACA+TGG	+	chr4_2:67135569-67135588	None:intergenic	30.0%
	GCATAGTCTTCTCTTATATA+TGG	-	chr4_2:67135705-67135724	Msa0616870:CDS	30.0%
	CTCTTATATATGGTGTATGT+TGG	-	chr4_2:67135715-67135734	Msa0616870:CDS	30.0%
!	GATTTGGTATTGTATAATGG+TGG	-	chr4_2:67135741-67135760	Msa0616870:CDS	30.0%
!	TGATTTTTGTGTTTGTGTGA+GGG	+	chr4_2:67133445-67133464	None:intergenic	30.0%
!!!	TGGATGAAAAAGGGTTTTTT+GGG	+	chr4_2:67133498-67133517	None:intergenic	30.0%
!!!	ATGGATGAAAAAGGGTTTTT+TGG	+	chr4_2:67133499-67133518	None:intergenic	30.0%
	GAAAGGAAGAAGAAGAAAAA+TGG	+	chr4_2:67133604-67133623	None:intergenic	30.0%
	AACCGATTAGGTAAATTGAA+AGG	+	chr4_2:67133621-67133640	None:intergenic	30.0%
!!!	GGATTTTAGGGTTTTTGTTA+CGG	+	chr4_2:67133657-67133676	None:intergenic	30.0%
	CCATTCTAAACACAAAGTAT+GGG	+	chr4_2:67134119-67134138	None:intergenic	30.0%
	ACCATTCTAAACACAAAGTA+TGG	+	chr4_2:67134120-67134139	None:intergenic	30.0%
!!!	CTATTGGTGTTAGTATTTTG+TGG	-	chr4_2:67134220-67134239	Msa0616870:intron	30.0%
	AAACCATATCAATTCTTGAG+TGG	+	chr4_2:67134416-67134435	None:intergenic	30.0%
	GATTTCAACATCAGATACAA+TGG	+	chr4_2:67134598-67134617	None:intergenic	30.0%
	CTTGAAAATGTACAATAGTG+GGG	-	chr4_2:67134617-67134636	Msa0616870:three_prime_UTR	30.0%
	AAATGGAAAAGATGTGATAG+GGG	+	chr4_2:67134853-67134872	None:intergenic	30.0%
	CAAAATGGAAAAGATGTGAT+AGG	+	chr4_2:67134855-67134874	None:intergenic	30.0%
!!	CGTATGTTTTTGCTATATCA+AGG	+	chr4_2:67134886-67134905	None:intergenic	30.0%
	AAATTCAATCAAAAGAGGGA+GGG	+	chr4_2:67134946-67134965	None:intergenic	30.0%
	CATCCAAATTCAATCAAAAG+AGG	+	chr4_2:67134951-67134970	None:intergenic	30.0%
!!	CTCTTTTGATTGAATTTGGA+TGG	-	chr4_2:67134949-67134968	Msa0616870:CDS	30.0%
	TGTTGTTACATGAGTTCAAT+TGG	-	chr4_2:67135132-67135151	Msa0616870:CDS	30.0%
!!!	TTGTTGCTAGTGTTGTTTTT+GGG	-	chr4_2:67135357-67135376	Msa0616870:CDS	30.0%
!	CACAATTATTTTCATTCCTC+AGG	+	chr4_2:67135495-67135514	None:intergenic	30.0%
	CTGAGGAATGAAAATAATTG+TGG	-	chr4_2:67135493-67135512	Msa0616870:CDS	30.0%
!	AGTTACTTTAACATAGGACA+TGG	+	chr4_2:67135569-67135588	None:intergenic	30.0%
	GCATAGTCTTCTCTTATATA+TGG	-	chr4_2:67135705-67135724	Msa0616870:CDS	30.0%
	CTCTTATATATGGTGTATGT+TGG	-	chr4_2:67135715-67135734	Msa0616870:CDS	30.0%
!	GATTTGGTATTGTATAATGG+TGG	-	chr4_2:67135741-67135760	Msa0616870:CDS	30.0%
!	CTGATTTTTGTGTTTGTGTG+AGG	+	chr4_2:67133446-67133465	None:intergenic	35.0%
!!!	AAGGGTTTTTTGGGAAATGA+TGG	+	chr4_2:67133489-67133508	None:intergenic	35.0%
!	ATTTTTCGTGTGTTGGGTTT+GGG	+	chr4_2:67133541-67133560	None:intergenic	35.0%
	AAACCCAACACACGAAAAAT+GGG	-	chr4_2:67133541-67133560	Msa0616870:three_prime_UTR	35.0%
!!	ATTCCCATTTTTCGTGTGTT+GGG	+	chr4_2:67133547-67133566	None:intergenic	35.0%
	TATTCTTCTTCCACCAAGAT+TGG	-	chr4_2:67133569-67133588	Msa0616870:three_prime_UTR	35.0%
	ATGGGAAAACTAACCAATCT+TGG	+	chr4_2:67133585-67133604	None:intergenic	35.0%
!	GTTTTTGTTACGGAAGAGAA+TGG	+	chr4_2:67133647-67133666	None:intergenic	35.0%
!	AGAATTCGGATCGGATTTTA+GGG	+	chr4_2:67133669-67133688	None:intergenic	35.0%
	GATTAAACAGCTGGAGAATT+CGG	+	chr4_2:67133683-67133702	None:intergenic	35.0%
	TGTTTAATCTCCCTCTTTCA+CGG	-	chr4_2:67133694-67133713	Msa0616870:three_prime_UTR	35.0%
!	TGTAATCAAGAACGGTTTTC+TGG	+	chr4_2:67133798-67133817	None:intergenic	35.0%
	AACGACGTAGTGTAATAGAT+CGG	+	chr4_2:67133839-67133858	None:intergenic	35.0%
	ACGTGTTGTATTCTATTGTG+AGG	-	chr4_2:67134082-67134101	Msa0616870:intron	35.0%
	CGTGTTGTATTCTATTGTGA+GGG	-	chr4_2:67134083-67134102	Msa0616870:intron	35.0%
	GTGTTGTATTCTATTGTGAG+GGG	-	chr4_2:67134084-67134103	Msa0616870:intron	35.0%
	CCCATACTTTGTGTTTAGAA+TGG	-	chr4_2:67134116-67134135	Msa0616870:intron	35.0%
!!!	ATGGTTTTGTTCTATGCTAG+CGG	-	chr4_2:67134135-67134154	Msa0616870:intron	35.0%
	CTCATTAGTGAAAGAAGAAC+TGG	-	chr4_2:67134264-67134283	Msa0616870:intron	35.0%
	AAGAACTGGTGCAAAATTAG+AGG	-	chr4_2:67134278-67134297	Msa0616870:intron	35.0%
	TCAATGGTTACAACAGTACA+GGG	+	chr4_2:67134371-67134390	None:intergenic	35.0%
	ATCAATGGTTACAACAGTAC+AGG	+	chr4_2:67134372-67134391	None:intergenic	35.0%
	CTTCCACTCAAGAATTGATA+TGG	-	chr4_2:67134410-67134429	Msa0616870:three_prime_UTR	35.0%
	CTCACTCAAATTTCACATGT+AGG	+	chr4_2:67134652-67134671	None:intergenic	35.0%
!	GAAATTTTGTGCACTCTTGA+TGG	-	chr4_2:67134671-67134690	Msa0616870:three_prime_UTR	35.0%
!	TCACATCTTTTCCATTTTGC+AGG	-	chr4_2:67134856-67134875	Msa0616870:three_prime_UTR	35.0%
!	ATCAAGGTATTCCTGCAAAA+TGG	+	chr4_2:67134870-67134889	None:intergenic	35.0%
	AATTCAATCAAAAGAGGGAG+GGG	+	chr4_2:67134945-67134964	None:intergenic	35.0%
	CAAATTCAATCAAAAGAGGG+AGG	+	chr4_2:67134947-67134966	None:intergenic	35.0%
!!	CTCCCTCTTTTGATTGAATT+TGG	-	chr4_2:67134945-67134964	Msa0616870:CDS	35.0%
!!	CGTGTGATTATTTTGTAGCT+CGG	-	chr4_2:67134980-67134999	Msa0616870:CDS	35.0%
	TGCACTTGCATTGTTTGTTT+AGG	-	chr4_2:67135017-67135036	Msa0616870:CDS	35.0%
	GAACAGCAGCAAAGAAAATA+AGG	+	chr4_2:67135302-67135321	None:intergenic	35.0%
	AAACAACACTAGCAACAAGA+GGG	+	chr4_2:67135355-67135374	None:intergenic	35.0%
	AAAACAACACTAGCAACAAG+AGG	+	chr4_2:67135356-67135375	None:intergenic	35.0%
!!!	CTTGTTGCTAGTGTTGTTTT+TGG	-	chr4_2:67135356-67135375	Msa0616870:CDS	35.0%
!!!	TGTTGCTAGTGTTGTTTTTG+GGG	-	chr4_2:67135358-67135377	Msa0616870:CDS	35.0%
	CTTACATCACATAAGTTCAC+CGG	+	chr4_2:67135677-67135696	None:intergenic	35.0%
	TGGTGTATGTTGGAATGATT+TGG	-	chr4_2:67135725-67135744	Msa0616870:CDS	35.0%
!	CTGATTTTTGTGTTTGTGTG+AGG	+	chr4_2:67133446-67133465	None:intergenic	35.0%
!!!	AAGGGTTTTTTGGGAAATGA+TGG	+	chr4_2:67133489-67133508	None:intergenic	35.0%
!	ATTTTTCGTGTGTTGGGTTT+GGG	+	chr4_2:67133541-67133560	None:intergenic	35.0%
	AAACCCAACACACGAAAAAT+GGG	-	chr4_2:67133541-67133560	Msa0616870:three_prime_UTR	35.0%
!!	ATTCCCATTTTTCGTGTGTT+GGG	+	chr4_2:67133547-67133566	None:intergenic	35.0%
	TATTCTTCTTCCACCAAGAT+TGG	-	chr4_2:67133569-67133588	Msa0616870:three_prime_UTR	35.0%
	ATGGGAAAACTAACCAATCT+TGG	+	chr4_2:67133585-67133604	None:intergenic	35.0%
!	GTTTTTGTTACGGAAGAGAA+TGG	+	chr4_2:67133647-67133666	None:intergenic	35.0%
!	AGAATTCGGATCGGATTTTA+GGG	+	chr4_2:67133669-67133688	None:intergenic	35.0%
	GATTAAACAGCTGGAGAATT+CGG	+	chr4_2:67133683-67133702	None:intergenic	35.0%
	TGTTTAATCTCCCTCTTTCA+CGG	-	chr4_2:67133694-67133713	Msa0616870:three_prime_UTR	35.0%
!	TGTAATCAAGAACGGTTTTC+TGG	+	chr4_2:67133798-67133817	None:intergenic	35.0%
	AACGACGTAGTGTAATAGAT+CGG	+	chr4_2:67133839-67133858	None:intergenic	35.0%
	ACGTGTTGTATTCTATTGTG+AGG	-	chr4_2:67134082-67134101	Msa0616870:intron	35.0%
	CGTGTTGTATTCTATTGTGA+GGG	-	chr4_2:67134083-67134102	Msa0616870:intron	35.0%
	GTGTTGTATTCTATTGTGAG+GGG	-	chr4_2:67134084-67134103	Msa0616870:intron	35.0%
	CCCATACTTTGTGTTTAGAA+TGG	-	chr4_2:67134116-67134135	Msa0616870:intron	35.0%
!!!	ATGGTTTTGTTCTATGCTAG+CGG	-	chr4_2:67134135-67134154	Msa0616870:intron	35.0%
	CTCATTAGTGAAAGAAGAAC+TGG	-	chr4_2:67134264-67134283	Msa0616870:intron	35.0%
	AAGAACTGGTGCAAAATTAG+AGG	-	chr4_2:67134278-67134297	Msa0616870:intron	35.0%
	TCAATGGTTACAACAGTACA+GGG	+	chr4_2:67134371-67134390	None:intergenic	35.0%
	ATCAATGGTTACAACAGTAC+AGG	+	chr4_2:67134372-67134391	None:intergenic	35.0%
	CTTCCACTCAAGAATTGATA+TGG	-	chr4_2:67134410-67134429	Msa0616870:three_prime_UTR	35.0%
	CTCACTCAAATTTCACATGT+AGG	+	chr4_2:67134652-67134671	None:intergenic	35.0%
!	GAAATTTTGTGCACTCTTGA+TGG	-	chr4_2:67134671-67134690	Msa0616870:three_prime_UTR	35.0%
!	TCACATCTTTTCCATTTTGC+AGG	-	chr4_2:67134856-67134875	Msa0616870:three_prime_UTR	35.0%
!	ATCAAGGTATTCCTGCAAAA+TGG	+	chr4_2:67134870-67134889	None:intergenic	35.0%
	AATTCAATCAAAAGAGGGAG+GGG	+	chr4_2:67134945-67134964	None:intergenic	35.0%
	CAAATTCAATCAAAAGAGGG+AGG	+	chr4_2:67134947-67134966	None:intergenic	35.0%
!!	CTCCCTCTTTTGATTGAATT+TGG	-	chr4_2:67134945-67134964	Msa0616870:CDS	35.0%
!!	CGTGTGATTATTTTGTAGCT+CGG	-	chr4_2:67134980-67134999	Msa0616870:CDS	35.0%
	TGCACTTGCATTGTTTGTTT+AGG	-	chr4_2:67135017-67135036	Msa0616870:CDS	35.0%
	GAACAGCAGCAAAGAAAATA+AGG	+	chr4_2:67135302-67135321	None:intergenic	35.0%
	AAACAACACTAGCAACAAGA+GGG	+	chr4_2:67135355-67135374	None:intergenic	35.0%
	AAAACAACACTAGCAACAAG+AGG	+	chr4_2:67135356-67135375	None:intergenic	35.0%
!!!	CTTGTTGCTAGTGTTGTTTT+TGG	-	chr4_2:67135356-67135375	Msa0616870:CDS	35.0%
!!!	TGTTGCTAGTGTTGTTTTTG+GGG	-	chr4_2:67135358-67135377	Msa0616870:CDS	35.0%
	CTTACATCACATAAGTTCAC+CGG	+	chr4_2:67135677-67135696	None:intergenic	35.0%
	TGGTGTATGTTGGAATGATT+TGG	-	chr4_2:67135725-67135744	Msa0616870:CDS	35.0%
	TTGTGTTTGTGTGAGGGTTT+GGG	+	chr4_2:67133439-67133458	None:intergenic	40.0%
	TTTGTGTTTGTGTGAGGGTT+TGG	+	chr4_2:67133440-67133459	None:intergenic	40.0%
!	CATTTTTCGTGTGTTGGGTT+TGG	+	chr4_2:67133542-67133561	None:intergenic	40.0%
	CAAACCCAACACACGAAAAA+TGG	-	chr4_2:67133540-67133559	Msa0616870:three_prime_UTR	40.0%
!!	CATTCCCATTTTTCGTGTGT+TGG	+	chr4_2:67133548-67133567	None:intergenic	40.0%
	GGAAAACTAACCAATCTTGG+TGG	+	chr4_2:67133582-67133601	None:intergenic	40.0%
	AGAGAATGGAGTAACCGATT+AGG	+	chr4_2:67133633-67133652	None:intergenic	40.0%
!	GAGAATTCGGATCGGATTTT+AGG	+	chr4_2:67133670-67133689	None:intergenic	40.0%
	AAAGAGGGAGATTAAACAGC+TGG	+	chr4_2:67133692-67133711	None:intergenic	40.0%
!!	AAGAACGGTTTTCTGGAAAG+CGG	+	chr4_2:67133791-67133810	None:intergenic	40.0%
	AGCGATGCTGTAATCAAGAA+CGG	+	chr4_2:67133806-67133825	None:intergenic	40.0%
	GAATACAACACGTAAAACGG+CGG	+	chr4_2:67134075-67134094	None:intergenic	40.0%
	TTCTATTGTGAGGGGATTTG+TGG	-	chr4_2:67134092-67134111	Msa0616870:intron	40.0%
	TCTATTGTGAGGGGATTTGT+GGG	-	chr4_2:67134093-67134112	Msa0616870:intron	40.0%
!!!	TGGTTTTGTTCTATGCTAGC+GGG	-	chr4_2:67134136-67134155	Msa0616870:intron	40.0%
!	TACGTGGATTTGGGTTTCTT+GGG	-	chr4_2:67134179-67134198	Msa0616870:intron	40.0%
!	GTGGTGGTTATTTCAGCTAT+TGG	-	chr4_2:67134204-67134223	Msa0616870:intron	40.0%
!	TTTTGTGGGTATACACTCGT+TGG	-	chr4_2:67134235-67134254	Msa0616870:intron	40.0%
	TTTGTGGGTATACACTCGTT+GGG	-	chr4_2:67134236-67134255	Msa0616870:intron	40.0%
!	CACTCTTGATGGCAAATGTT+TGG	-	chr4_2:67134682-67134701	Msa0616870:three_prime_UTR	40.0%
	AGTAGTATCAGCATTGCTGA+AGG	-	chr4_2:67135085-67135104	Msa0616870:CDS	40.0%
	AAGGACTGCGTTATTATCGT+AGG	-	chr4_2:67135104-67135123	Msa0616870:CDS	40.0%
!!!	TTTTTGGGGCTACCAAATCA+TGG	-	chr4_2:67135372-67135391	Msa0616870:CDS	40.0%
!	TGCATGCATTTAGAACTTCC+CGG	+	chr4_2:67135403-67135422	None:intergenic	40.0%
!	ATTTTCATTCCTCAGGGACA+TGG	+	chr4_2:67135488-67135507	None:intergenic	40.0%
	TTGTGTTTGTGTGAGGGTTT+GGG	+	chr4_2:67133439-67133458	None:intergenic	40.0%
	TTTGTGTTTGTGTGAGGGTT+TGG	+	chr4_2:67133440-67133459	None:intergenic	40.0%
!	CATTTTTCGTGTGTTGGGTT+TGG	+	chr4_2:67133542-67133561	None:intergenic	40.0%
	CAAACCCAACACACGAAAAA+TGG	-	chr4_2:67133540-67133559	Msa0616870:three_prime_UTR	40.0%
!!	CATTCCCATTTTTCGTGTGT+TGG	+	chr4_2:67133548-67133567	None:intergenic	40.0%
	GGAAAACTAACCAATCTTGG+TGG	+	chr4_2:67133582-67133601	None:intergenic	40.0%
	AGAGAATGGAGTAACCGATT+AGG	+	chr4_2:67133633-67133652	None:intergenic	40.0%
!	GAGAATTCGGATCGGATTTT+AGG	+	chr4_2:67133670-67133689	None:intergenic	40.0%
	AAAGAGGGAGATTAAACAGC+TGG	+	chr4_2:67133692-67133711	None:intergenic	40.0%
!!	AAGAACGGTTTTCTGGAAAG+CGG	+	chr4_2:67133791-67133810	None:intergenic	40.0%
	AGCGATGCTGTAATCAAGAA+CGG	+	chr4_2:67133806-67133825	None:intergenic	40.0%
	GAATACAACACGTAAAACGG+CGG	+	chr4_2:67134075-67134094	None:intergenic	40.0%
	TTCTATTGTGAGGGGATTTG+TGG	-	chr4_2:67134092-67134111	Msa0616870:intron	40.0%
	TCTATTGTGAGGGGATTTGT+GGG	-	chr4_2:67134093-67134112	Msa0616870:intron	40.0%
!!!	TGGTTTTGTTCTATGCTAGC+GGG	-	chr4_2:67134136-67134155	Msa0616870:intron	40.0%
!	TACGTGGATTTGGGTTTCTT+GGG	-	chr4_2:67134179-67134198	Msa0616870:intron	40.0%
!	GTGGTGGTTATTTCAGCTAT+TGG	-	chr4_2:67134204-67134223	Msa0616870:intron	40.0%
!	TTTTGTGGGTATACACTCGT+TGG	-	chr4_2:67134235-67134254	Msa0616870:intron	40.0%
	TTTGTGGGTATACACTCGTT+GGG	-	chr4_2:67134236-67134255	Msa0616870:intron	40.0%
!	CACTCTTGATGGCAAATGTT+TGG	-	chr4_2:67134682-67134701	Msa0616870:three_prime_UTR	40.0%
	AGTAGTATCAGCATTGCTGA+AGG	-	chr4_2:67135085-67135104	Msa0616870:CDS	40.0%
	AAGGACTGCGTTATTATCGT+AGG	-	chr4_2:67135104-67135123	Msa0616870:CDS	40.0%
!!!	TTTTTGGGGCTACCAAATCA+TGG	-	chr4_2:67135372-67135391	Msa0616870:CDS	40.0%
!	TGCATGCATTTAGAACTTCC+CGG	+	chr4_2:67135403-67135422	None:intergenic	40.0%
!	ATTTTCATTCCTCAGGGACA+TGG	+	chr4_2:67135488-67135507	None:intergenic	40.0%
	AACAGCTGGAGAATTCGGAT+CGG	+	chr4_2:67133678-67133697	None:intergenic	45.0%
!	TTTCTGGAAAGCGGTGTTGA+GGG	+	chr4_2:67133782-67133801	None:intergenic	45.0%
!!	TTTTCTGGAAAGCGGTGTTG+AGG	+	chr4_2:67133783-67133802	None:intergenic	45.0%
	GAGAACAAGCAAAACGACGA+CGG	+	chr4_2:67133956-67133975	None:intergenic	45.0%
	CAGAACATCGTAAACCCTAG+CGG	+	chr4_2:67134049-67134068	None:intergenic	45.0%
	CAAGAAACCCAAATCCACGT+AGG	+	chr4_2:67134180-67134199	None:intergenic	45.0%
!	CTACGTGGATTTGGGTTTCT+TGG	-	chr4_2:67134178-67134197	Msa0616870:intron	45.0%
	AAACCTATAGCGAGCGATAC+AGG	+	chr4_2:67134917-67134936	None:intergenic	45.0%
	TATTGACCAGCAGCAGCTAA+AGG	+	chr4_2:67135236-67135255	None:intergenic	45.0%
	TTTCCAAATCCATGTCCCTG+AGG	-	chr4_2:67135476-67135495	Msa0616870:CDS	45.0%
	ATTCCTCAGGGACATGGATT+TGG	+	chr4_2:67135482-67135501	None:intergenic	45.0%
	AACAGCTGGAGAATTCGGAT+CGG	+	chr4_2:67133678-67133697	None:intergenic	45.0%
!	TTTCTGGAAAGCGGTGTTGA+GGG	+	chr4_2:67133782-67133801	None:intergenic	45.0%
!!	TTTTCTGGAAAGCGGTGTTG+AGG	+	chr4_2:67133783-67133802	None:intergenic	45.0%
	GAGAACAAGCAAAACGACGA+CGG	+	chr4_2:67133956-67133975	None:intergenic	45.0%
	CAGAACATCGTAAACCCTAG+CGG	+	chr4_2:67134049-67134068	None:intergenic	45.0%
	CAAGAAACCCAAATCCACGT+AGG	+	chr4_2:67134180-67134199	None:intergenic	45.0%
!	CTACGTGGATTTGGGTTTCT+TGG	-	chr4_2:67134178-67134197	Msa0616870:intron	45.0%
	AAACCTATAGCGAGCGATAC+AGG	+	chr4_2:67134917-67134936	None:intergenic	45.0%
	TATTGACCAGCAGCAGCTAA+AGG	+	chr4_2:67135236-67135255	None:intergenic	45.0%
	TTTCCAAATCCATGTCCCTG+AGG	-	chr4_2:67135476-67135495	Msa0616870:CDS	45.0%
	ATTCCTCAGGGACATGGATT+TGG	+	chr4_2:67135482-67135501	None:intergenic	45.0%
	CGATGAAGAGAACGTCGCTT+GGG	+	chr4_2:67133867-67133886	None:intergenic	50.0%
	CGTGACGATAACGAAAAGCG+TGG	+	chr4_2:67133902-67133921	None:intergenic	50.0%
	CCATGTATTCTGACAAGCGC+TGG	+	chr4_2:67133989-67134008	None:intergenic	50.0%
	CCAGCGCTTGTCAGAATACA+TGG	-	chr4_2:67133986-67134005	Msa0616870:intron	50.0%
	CAGAATACATGGACGCTCAC+CGG	-	chr4_2:67133997-67134016	Msa0616870:intron	50.0%
!	ATTTTCCTTCCGGCAAGCAC+CGG	+	chr4_2:67134019-67134038	None:intergenic	50.0%
!!	TATGCTAGCGGGCTTGCTTA+TGG	-	chr4_2:67134147-67134166	Msa0616870:intron	50.0%
!!	ATGCTAGCGGGCTTGCTTAT+GGG	-	chr4_2:67134148-67134167	Msa0616870:intron	50.0%
	GCTTGTGCCTACGTGGATTT+GGG	-	chr4_2:67134170-67134189	Msa0616870:intron	50.0%
!	GATTTGGGTTTCTTGGGCTG+TGG	-	chr4_2:67134185-67134204	Msa0616870:intron	50.0%
	CATCCTGTATCGCTCGCTAT+AGG	-	chr4_2:67134911-67134930	Msa0616870:CDS	50.0%
	GTTTGTCCTTTAGCTGCTGC+TGG	-	chr4_2:67135227-67135246	Msa0616870:CDS	50.0%
	CTACCAAATCATGGCAGCTC+CGG	-	chr4_2:67135381-67135400	Msa0616870:CDS	50.0%
	TACCAAATCATGGCAGCTCC+GGG	-	chr4_2:67135382-67135401	Msa0616870:CDS	50.0%
	TATGAGACTCACGCCTGAAC+AGG	-	chr4_2:67135633-67135652	Msa0616870:CDS	50.0%
	AATCACCTCATGGCCTGTTC+AGG	+	chr4_2:67135649-67135668	None:intergenic	50.0%
!	GCCATGAGGTGATTTGTCTC+CGG	-	chr4_2:67135655-67135674	Msa0616870:CDS	50.0%
	ACCGGAGACAAATCACCTCA+TGG	+	chr4_2:67135659-67135678	None:intergenic	50.0%
	CGATGAAGAGAACGTCGCTT+GGG	+	chr4_2:67133867-67133886	None:intergenic	50.0%
	CGTGACGATAACGAAAAGCG+TGG	+	chr4_2:67133902-67133921	None:intergenic	50.0%
	CCATGTATTCTGACAAGCGC+TGG	+	chr4_2:67133989-67134008	None:intergenic	50.0%
	CCAGCGCTTGTCAGAATACA+TGG	-	chr4_2:67133986-67134005	Msa0616870:intron	50.0%
	CAGAATACATGGACGCTCAC+CGG	-	chr4_2:67133997-67134016	Msa0616870:intron	50.0%
!	ATTTTCCTTCCGGCAAGCAC+CGG	+	chr4_2:67134019-67134038	None:intergenic	50.0%
!!	TATGCTAGCGGGCTTGCTTA+TGG	-	chr4_2:67134147-67134166	Msa0616870:intron	50.0%
!!	ATGCTAGCGGGCTTGCTTAT+GGG	-	chr4_2:67134148-67134167	Msa0616870:intron	50.0%
	GCTTGTGCCTACGTGGATTT+GGG	-	chr4_2:67134170-67134189	Msa0616870:intron	50.0%
!	GATTTGGGTTTCTTGGGCTG+TGG	-	chr4_2:67134185-67134204	Msa0616870:intron	50.0%
	CATCCTGTATCGCTCGCTAT+AGG	-	chr4_2:67134911-67134930	Msa0616870:CDS	50.0%
	GTTTGTCCTTTAGCTGCTGC+TGG	-	chr4_2:67135227-67135246	Msa0616870:CDS	50.0%
	CTACCAAATCATGGCAGCTC+CGG	-	chr4_2:67135381-67135400	Msa0616870:CDS	50.0%
	TACCAAATCATGGCAGCTCC+GGG	-	chr4_2:67135382-67135401	Msa0616870:CDS	50.0%
	TATGAGACTCACGCCTGAAC+AGG	-	chr4_2:67135633-67135652	Msa0616870:CDS	50.0%
	AATCACCTCATGGCCTGTTC+AGG	+	chr4_2:67135649-67135668	None:intergenic	50.0%
!	GCCATGAGGTGATTTGTCTC+CGG	-	chr4_2:67135655-67135674	Msa0616870:CDS	50.0%
	ACCGGAGACAAATCACCTCA+TGG	+	chr4_2:67135659-67135678	None:intergenic	50.0%
	ATCTTCTCCGACCCCAACAG+CGG	-	chr4_2:67133748-67133767	Msa0616870:three_prime_UTR	55.0%
	GCGATGAAGAGAACGTCGCT+TGG	+	chr4_2:67133868-67133887	None:intergenic	55.0%
	TGCCGTCACGTCGTTTCTCA+TGG	-	chr4_2:67133922-67133941	Msa0616870:intron	55.0%
	CGCCATGAGAAACGACGTGA+CGG	+	chr4_2:67133927-67133946	None:intergenic	55.0%
!	CGGCGAAGCGATTTTCCTTC+CGG	+	chr4_2:67134029-67134048	None:intergenic	55.0%
	AGGAAAATCGCTTCGCCGCT+AGG	-	chr4_2:67134031-67134050	Msa0616870:intron	55.0%
	GGAAAATCGCTTCGCCGCTA+GGG	-	chr4_2:67134032-67134051	Msa0616870:intron	55.0%
	CTTATGGGCTTGTGCCTACG+TGG	-	chr4_2:67134163-67134182	Msa0616870:intron	55.0%
	GGCTTGTGCCTACGTGGATT+TGG	-	chr4_2:67134169-67134188	Msa0616870:intron	55.0%
	TTGGGTTTCTTGGGCTGTGG+TGG	-	chr4_2:67134188-67134207	Msa0616870:intron	55.0%
	AGGACAAACTCAGCAGCGCA+TGG	+	chr4_2:67135216-67135235	None:intergenic	55.0%
	TTCCCGGAGCTGCCATGATT+TGG	+	chr4_2:67135387-67135406	None:intergenic	55.0%
	ATCTTCTCCGACCCCAACAG+CGG	-	chr4_2:67133748-67133767	Msa0616870:three_prime_UTR	55.0%
	GCGATGAAGAGAACGTCGCT+TGG	+	chr4_2:67133868-67133887	None:intergenic	55.0%
	TGCCGTCACGTCGTTTCTCA+TGG	-	chr4_2:67133922-67133941	Msa0616870:intron	55.0%
	CGCCATGAGAAACGACGTGA+CGG	+	chr4_2:67133927-67133946	None:intergenic	55.0%
!	CGGCGAAGCGATTTTCCTTC+CGG	+	chr4_2:67134029-67134048	None:intergenic	55.0%
	AGGAAAATCGCTTCGCCGCT+AGG	-	chr4_2:67134031-67134050	Msa0616870:intron	55.0%
	GGAAAATCGCTTCGCCGCTA+GGG	-	chr4_2:67134032-67134051	Msa0616870:intron	55.0%
	CTTATGGGCTTGTGCCTACG+TGG	-	chr4_2:67134163-67134182	Msa0616870:intron	55.0%
	GGCTTGTGCCTACGTGGATT+TGG	-	chr4_2:67134169-67134188	Msa0616870:intron	55.0%
	TTGGGTTTCTTGGGCTGTGG+TGG	-	chr4_2:67134188-67134207	Msa0616870:intron	55.0%
	AGGACAAACTCAGCAGCGCA+TGG	+	chr4_2:67135216-67135235	None:intergenic	55.0%
	TTCCCGGAGCTGCCATGATT+TGG	+	chr4_2:67135387-67135406	None:intergenic	55.0%
!	GGAGATGGCGCCGAAGATTG+CGG	+	chr4_2:67133728-67133747	None:intergenic	60.0%
	GGGGTCGGAGAAGATGGAGA+TGG	+	chr4_2:67133743-67133762	None:intergenic	60.0%
	GCTGTTGGGGTCGGAGAAGA+TGG	+	chr4_2:67133749-67133768	None:intergenic	60.0%
	AGGGAAGCGAAGCCGCTGTT+GGG	+	chr4_2:67133763-67133782	None:intergenic	60.0%
	TCACGCCTGAACAGGCCATG+AGG	-	chr4_2:67135641-67135660	Msa0616870:CDS	60.0%
!	GGAGATGGCGCCGAAGATTG+CGG	+	chr4_2:67133728-67133747	None:intergenic	60.0%
	GGGGTCGGAGAAGATGGAGA+TGG	+	chr4_2:67133743-67133762	None:intergenic	60.0%
	GCTGTTGGGGTCGGAGAAGA+TGG	+	chr4_2:67133749-67133768	None:intergenic	60.0%
	AGGGAAGCGAAGCCGCTGTT+GGG	+	chr4_2:67133763-67133782	None:intergenic	60.0%
	TCACGCCTGAACAGGCCATG+AGG	-	chr4_2:67135641-67135660	Msa0616870:CDS	60.0%
	GGCGGGTGTGCCGTGAAAGA+GGG	+	chr4_2:67133707-67133726	None:intergenic	65.0%
	GGCACACCCGCCGCAATCTT+CGG	-	chr4_2:67133715-67133734	Msa0616870:three_prime_UTR	65.0%
!	ATGGCGCCGAAGATTGCGGC+GGG	+	chr4_2:67133724-67133743	None:intergenic	65.0%
!	GATGGCGCCGAAGATTGCGG+CGG	+	chr4_2:67133725-67133744	None:intergenic	65.0%
	AGCGAAGCCGCTGTTGGGGT+CGG	+	chr4_2:67133758-67133777	None:intergenic	65.0%
	GGGAAGCGAAGCCGCTGTTG+GGG	+	chr4_2:67133762-67133781	None:intergenic	65.0%
	GAGGGAAGCGAAGCCGCTGT+TGG	+	chr4_2:67133764-67133783	None:intergenic	65.0%
	GGCGGGTGTGCCGTGAAAGA+GGG	+	chr4_2:67133707-67133726	None:intergenic	65.0%
	GGCACACCCGCCGCAATCTT+CGG	-	chr4_2:67133715-67133734	Msa0616870:three_prime_UTR	65.0%
!	ATGGCGCCGAAGATTGCGGC+GGG	+	chr4_2:67133724-67133743	None:intergenic	65.0%
!	GATGGCGCCGAAGATTGCGG+CGG	+	chr4_2:67133725-67133744	None:intergenic	65.0%
	AGCGAAGCCGCTGTTGGGGT+CGG	+	chr4_2:67133758-67133777	None:intergenic	65.0%
	GGGAAGCGAAGCCGCTGTTG+GGG	+	chr4_2:67133762-67133781	None:intergenic	65.0%
	GAGGGAAGCGAAGCCGCTGT+TGG	+	chr4_2:67133764-67133783	None:intergenic	65.0%
	CGGCGGGTGTGCCGTGAAAG+AGG	+	chr4_2:67133708-67133727	None:intergenic	70.0%
	GGACGCTCACCGGTGCTTGC+CGG	-	chr4_2:67134007-67134026	Msa0616870:intron	70.0%
	GCTCACCGGTGCTTGCCGGA+AGG	-	chr4_2:67134011-67134030	Msa0616870:intron	70.0%
	CGGCGGGTGTGCCGTGAAAG+AGG	+	chr4_2:67133708-67133727	None:intergenic	70.0%
	GGACGCTCACCGGTGCTTGC+CGG	-	chr4_2:67134007-67134026	Msa0616870:intron	70.0%
	GCTCACCGGTGCTTGCCGGA+AGG	-	chr4_2:67134011-67134030	Msa0616870:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_2	gene	67133430	67135781	67133430	ID=Msa0616870;Name=Msa0616870
chr4_2	mRNA	67133430	67135781	67133430	ID=Msa0616870-mRNA-1;Parent=Msa0616870;Name=Msa0616870-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0\|1\|1\|1\|1\|1\|2\|1064\|294
chr4_2	exon	67133430	67133875	67133430	ID=Msa0616870-mRNA-1:exon:19144;Parent=Msa0616870-mRNA-1
chr4_2	exon	67134279	67135781	67134279	ID=Msa0616870-mRNA-1:exon:19143;Parent=Msa0616870-mRNA-1
chr4_2	CDS	67134897	67135781	67134897	ID=Msa0616870-mRNA-1:cds;Parent=Msa0616870-mRNA-1
chr4_2	three_prime_UTR	67134279	67134896	67134279	ID=Msa0616870-mRNA-1:three_prime_utr;Parent=Msa0616870-mRNA-1
chr4_2	three_prime_UTR	67133430	67133875	67133430	ID=Msa0616870-mRNA-1:three_prime_utr;Parent=Msa0616870-mRNA-1

Gene Sequence

>Msa0616870

CACTCACCCAAACCCTCACACAAACACAAAAATCAGAATAAAAAATCGAGAATATTCCATCATTTCCCAAAAAACCCTTTTTCATCCATAAACTTTCTCAATCACATTCCCAAACCCAACACACGAAAAATGGGAATGCTATTCTTCTTCCACCAAGATTGGTTAGTTTTCCCATTTTTCTTCTTCTTCCTTTCAATTTACCTAATCGGTTACTCCATTCTCTTCCGTAACAAAAACCCTAAAATCCGATCCGAATTCTCCAGCTGTTTAATCTCCCTCTTTCACGGCACACCCGCCGCAATCTTCGGCGCCATCTCCATCTTCTCCGACCCCAACAGCGGCTTCGCTTCCCTCAACACCGCTTTCCAGAAAACCGTTCTTGATTACAGCATCGCTTACTTCGTAACCGATCTATTACACTACGTCGTTTTCTTCCCAAGCGACGTTCTCTTCATCGCTCATCATTTAGCCACGCTTTTCGTTATCGTCACGTGCCGTCACGTCGTTTCTCATGGCGCTTTCTCCGTCGTCGTTTTGCTTGTTCTCGCTGAAGTCACCAGCGCTTGTCAGAATACATGGACGCTCACCGGTGCTTGCCGGAAGGAAAATCGCTTCGCCGCTAGGGTTTACGATGTTCTGTCGCCGCCGTTTTACGTGTTGTATTCTATTGTGAGGGGATTTGTGGGCCCATACTTTGTGTTTAGAATGGTTTTGTTCTATGCTAGCGGGCTTGCTTATGGGCTTGTGCCTACGTGGATTTGGGTTTCTTGGGCTGTGGTGGTTATTTCAGCTATTGGTGTTAGTATTTTGTGGGTATACACTCGTTGGGTTGAACTCATTAGTGAAAGAAGAACTGGTGCAAAATTAGAGGAAAAAATTAGATAG

Protein sequence

>Msa0616870

HSPKPSHKHKNQNKKSRIFHHFPKNPFSSINFLNHIPKPNTRKMGMLFFFHQDWLVFPFFFFFLSIYLIGYSILFRNKNPKIRSEFSSCLISLFHGTPAAIFGAISIFSDPNSGFASLNTAFQKTVLDYSIAYFVTDLLHYVVFFPSDVLFIAHHLATLFVIVTCRHVVSHGAFSVVVLLVLAEVTSACQNTWTLTGACRKENRFAARVYDVLSPPFYVLYSIVRGFVGPYFVFRMVLFYASGLAYGLVPTWIWVSWAVVVISAIGVSILWVYTRWVELISERRTGAKLEEKIR*