AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1060260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1060260 MtrunA17_Chr7g0237701 98.780 246 3 0 1 246 1 246 0.0 498
Msa1060260 MtrunA17_Chr4g0002321 47.234 235 123 1 13 246 9 243 6.04e-74 225
Msa1060260 MtrunA17_Chr1g0155331 46.383 235 125 1 13 246 10 244 3.37e-73 223
Msa1060260 MtrunA17_Chr2g0298841 45.344 247 131 2 1 246 1 244 6.31e-72 220
Msa1060260 MtrunA17_Chr3g0088731 83.784 74 11 1 1 74 1 73 3.49e-34 117
Msa1060260 MtrunA17_Chr1g0155311 56.667 60 26 0 177 236 3 62 7.43e-20 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1060260 AT1G80750.1 51.210 248 118 3 1 246 1 247 1.49e-78 237
Msa1060260 AT2G01250.1 48.101 237 118 2 13 246 8 242 1.11e-73 224
Msa1060260 AT2G44120.1 47.257 237 120 2 13 246 8 242 1.30e-73 224
Msa1060260 AT2G44120.2 47.257 237 120 2 13 246 13 247 1.53e-73 224
Msa1060260 AT3G13580.5 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT3G13580.4 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT3G13580.2 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT3G13580.3 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT3G13580.1 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT3G13580.7 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT3G13580.8 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT3G13580.6 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT3G13580.9 46.383 235 125 1 13 246 10 244 6.11e-73 223
Msa1060260 AT2G01250.2 43.605 172 92 2 13 181 8 177 9.32e-39 133

Find 76 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTTTGTGCCTTCATTTA+TGG 0.107675 7_2:-48048241 Msa1060260:three_prime_UTR
CAAACTGAACAAGTGCTTTC+TGG 0.154170 7_2:+48049717 None:intergenic
CTGAATACGAATGACTATTA+TGG 0.197278 7_2:+48049851 None:intergenic
CTTGTAAATCAGCTCCTTTA+TGG 0.209662 7_2:+48048737 None:intergenic
ACTATTATGGGTTTGTTCTT+TGG 0.209865 7_2:+48049864 None:intergenic
CATAATAGTCATTCGTATTC+AGG 0.226919 7_2:-48049850 Msa1060260:CDS
TACAAGGATGGTGGAGATTC+AGG 0.234481 7_2:-48048413 Msa1060260:CDS
TTGAAGAACTCATCATAAAA+AGG 0.245003 7_2:+48048077 None:intergenic
CAGAAAGCACTTGTTCAGTT+TGG 0.268658 7_2:-48049716 Msa1060260:CDS
CCCTTCGTTTCATTCTAATA+AGG 0.310268 7_2:+48049916 None:intergenic
CAATATAATCACAGTGTTGA+TGG 0.310840 7_2:-48048318 Msa1060260:three_prime_UTR
AAGCCAGCAGAGGGATTAAA+AGG 0.319017 7_2:-48048449 Msa1060260:CDS
TGAATACGAATGACTATTAT+GGG 0.333612 7_2:+48049852 None:intergenic
GGAATATAGTTGAGATCCTT+TGG 0.341915 7_2:+48050236 None:intergenic
AGAAAGCACTTGTTCAGTTT+GGG 0.353399 7_2:-48049715 Msa1060260:CDS
CTCTTCTTCAATATAACCTC+TGG 0.370051 7_2:+48050215 None:intergenic
TGCTGGCTTGTTCAGTTCAA+AGG 0.372394 7_2:+48048463 None:intergenic
ATGTAGGAATTGGGAAAGTT+TGG 0.390719 7_2:-48048566 Msa1060260:intron
AAAAGGGTTAATTAAGTAAA+CGG 0.412489 7_2:-48048050 Msa1060260:three_prime_UTR
TGCAAATCTTAAAACCATAA+AGG 0.425498 7_2:-48048751 Msa1060260:CDS
GTTCAAAGGGCCACATAAAT+CGG 0.432282 7_2:+48048477 None:intergenic
TATGTATTACCTGCTCAATA+AGG 0.444502 7_2:+48048664 None:intergenic
TTATTTGGGTTAGTAGAGAA+AGG 0.446402 7_2:-48048193 Msa1060260:three_prime_UTR
GCTGGCTTGTTCAGTTCAAA+GGG 0.448912 7_2:+48048464 None:intergenic
ATAATAGTCATTCGTATTCA+GGG 0.466571 7_2:-48049849 Msa1060260:CDS
GTTGAACCATATGTCACCTA+TGG 0.470090 7_2:-48049625 Msa1060260:CDS
CAATGTTGGTCCACACTTCA+AGG 0.470139 7_2:-48048507 Msa1060260:CDS
TCAATAAAATGAATTGATGT+AGG 0.482509 7_2:-48048361 Msa1060260:exon
ATCACAGTGTTGATGGTTTG+TGG 0.488925 7_2:-48048311 Msa1060260:three_prime_UTR
TATTTGGGTTAGTAGAGAAA+GGG 0.490570 7_2:-48048192 Msa1060260:three_prime_UTR
GCTTACCCATAGGTGACATA+TGG 0.491527 7_2:+48049619 None:intergenic
ACGAAGGGTCAAGTGGAGAC+GGG 0.493528 7_2:-48049901 Msa1060260:CDS
TTGGCCATCACTCCATCAGT+TGG 0.498511 7_2:+48049658 None:intergenic
GTCTTTGTGAAGCCAACTGA+TGG 0.503340 7_2:-48049670 Msa1060260:CDS
AGTCCTTGGACTTCCTTAGC+TGG 0.503847 7_2:+48050135 None:intergenic
AGCATGGGCCTTGAGTAAAA+AGG 0.505209 7_2:-48050180 Msa1060260:CDS
TGGTTTGTGGTGTCCTCACA+TGG 0.510258 7_2:-48048298 Msa1060260:three_prime_UTR
ACAAGGATGGTGGAGATTCA+GGG 0.513757 7_2:-48048412 Msa1060260:CDS
CAGCTAAAAGCCATAAATGA+AGG 0.518558 7_2:+48048231 None:intergenic
GGGTTAGTAGAGAAAGGGAT+TGG 0.518570 7_2:-48048187 Msa1060260:three_prime_UTR
CAGAGGTTATATTGAAGAAG+AGG 0.519905 7_2:-48050214 Msa1060260:CDS
ACTTGAGAAGATGGCTGAAG+AGG 0.520776 7_2:-48050264 Msa1060260:exon
AGGAAGTTGTCCGATTTATG+TGG 0.520802 7_2:-48048487 Msa1060260:CDS
AAAGGAGCTGATTTACAAGA+AGG 0.528892 7_2:-48048733 Msa1060260:CDS
AACGAAGGGTCAAGTGGAGA+CGG 0.529927 7_2:-48049902 Msa1060260:CDS
AATCTCCACCATCCTTGTAT+CGG 0.534716 7_2:+48048417 None:intergenic
TGATGGAGTGATGGCCAAGC+TGG 0.538270 7_2:-48049653 Msa1060260:CDS
AGAGGAAACACAGTGAAGCA+TGG 0.551237 7_2:-48050196 Msa1060260:CDS
ATAAGGTTATTGTCTGTCAA+AGG 0.552916 7_2:+48048681 None:intergenic
AGACAATAACCTTATTGAGC+AGG 0.555591 7_2:-48048673 Msa1060260:intron
GCAGTGAAAACTTGAGAAGA+TGG 0.566242 7_2:-48050273 Msa1060260:exon
GAGGAAACACAGTGAAGCAT+GGG 0.567999 7_2:-48050195 Msa1060260:CDS
GTGCATCAAATTGACAATGT+TGG 0.571611 7_2:-48048521 Msa1060260:CDS
CGAAGGGTCAAGTGGAGACG+GGG 0.582255 7_2:-48049900 Msa1060260:CDS
GAACTGAACAAGCCAGCAGA+GGG 0.584219 7_2:-48048458 Msa1060260:CDS
TGGTTCAACTCTCGCCAGCT+TGG 0.586026 7_2:+48049639 None:intergenic
GGCTGAAGAGGAACAACCAA+AGG 0.590481 7_2:-48050252 Msa1060260:CDS
TTGAACCATATGTCACCTAT+GGG 0.596680 7_2:-48049624 Msa1060260:intron
GAATGAAACGAAGGGTCAAG+TGG 0.608473 7_2:-48049908 Msa1060260:CDS
AAGGAGCTGATTTACAAGAA+GGG 0.610645 7_2:-48048732 Msa1060260:CDS
AAAAGGGAGCACCTACAGCA+TGG 0.616147 7_2:+48048139 None:intergenic
TTCATTTCAGGACATAAACA+TGG 0.621482 7_2:+48048104 None:intergenic
CGGACAACTTCCTTGAAGTG+TGG 0.624573 7_2:+48048497 None:intergenic
ACCTTATTAGAATGAAACGA+AGG 0.629621 7_2:-48049917 Msa1060260:CDS
TTTCCAGCTAAGGAAGTCCA+AGG 0.630704 7_2:-48050138 Msa1060260:CDS
CAAGGATGGTGGAGATTCAG+GGG 0.643297 7_2:-48048411 Msa1060260:CDS
TGAACTGAACAAGCCAGCAG+AGG 0.646369 7_2:-48048459 Msa1060260:CDS
CCTTATTAGAATGAAACGAA+GGG 0.647440 7_2:-48049916 Msa1060260:CDS
AAATCATCAAAATCCATGTG+AGG 0.647861 7_2:+48048285 None:intergenic
GAAGCCAACTGATGGAGTGA+TGG 0.656585 7_2:-48049662 Msa1060260:CDS
TAATAGTCATTCGTATTCAG+GGG 0.663363 7_2:-48049848 Msa1060260:intron
GGATCTCAACTATATTCCAG+AGG 0.692224 7_2:-48050231 Msa1060260:CDS
GCTCGTTGATGAGATCCTCA+CGG 0.699479 7_2:+48048387 None:intergenic
TGGAGATTCAGGGGACCGTG+AGG 0.708623 7_2:-48048402 Msa1060260:CDS
TGTACTTGAAACCATGCTGT+AGG 0.714890 7_2:-48048150 Msa1060260:three_prime_UTR
ATTATATTGATAGTATACTG+TGG 0.773702 7_2:+48048332 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAACAAAATAAAATGA+GGG + chr7_2:48048265-48048284 None:intergenic 10.0%
!!! TTTTTGTTTTCATTTTTATT+TGG - chr7_2:48050100-48050119 Msa1060260:CDS 10.0%
!!! TTTTGTTTTCATTTTTATTT+GGG - chr7_2:48050101-48050120 Msa1060260:CDS 10.0%
!! AATATAACAAAATAAAATGA+GGG + chr7_2:48048265-48048284 None:intergenic 10.0%
!!! TTTTTGTTTTCATTTTTATT+TGG - chr7_2:48050100-48050119 Msa1060260:CDS 10.0%
!!! TTTTGTTTTCATTTTTATTT+GGG - chr7_2:48050101-48050120 Msa1060260:CDS 10.0%
!! GAATATAACAAAATAAAATG+AGG + chr7_2:48048266-48048285 None:intergenic 15.0%
!!! TTTATGAAGTTTTTTTGAAA+AGG + chr7_2:48049174-48049193 None:intergenic 15.0%
!!! TACTATCTATAAATACTTTT+TGG - chr7_2:48049217-48049236 Msa1060260:intron 15.0%
!! GAATATAACAAAATAAAATG+AGG + chr7_2:48048266-48048285 None:intergenic 15.0%
!!! TTTATGAAGTTTTTTTGAAA+AGG + chr7_2:48049174-48049193 None:intergenic 15.0%
!!! TACTATCTATAAATACTTTT+TGG - chr7_2:48049217-48049236 Msa1060260:intron 15.0%
!! AAAATAAAATGAGGGATATA+AGG + chr7_2:48048257-48048276 None:intergenic 20.0%
!! ATTATGAACTTTCATATAGT+TGG - chr7_2:48048764-48048783 Msa1060260:intron 20.0%
!!! TTGAACTTTCATATAGTTTT+AGG - chr7_2:48048833-48048852 Msa1060260:intron 20.0%
!!! AAACACTATTTTTAGGTTAA+AGG - chr7_2:48049021-48049040 Msa1060260:intron 20.0%
!!! AACACTATTTTTAGGTTAAA+GGG - chr7_2:48049022-48049041 Msa1060260:intron 20.0%
!! ATTGGAATAAATTTAGTTAC+AGG + chr7_2:48049094-48049113 None:intergenic 20.0%
!! AATTTATGAAGTTAACTTTC+TGG + chr7_2:48049148-48049167 None:intergenic 20.0%
!! AAAACTTCATAAATTGTTTG+TGG - chr7_2:48049181-48049200 Msa1060260:intron 20.0%
!!! TTTTTGGTTTAGAATATTCA+CGG - chr7_2:48049233-48049252 Msa1060260:intron 20.0%
!!! AAACAGATTTTCACAAAATT+AGG + chr7_2:48049525-48049544 None:intergenic 20.0%
!! TCAATAAAATGAATTGATGT+AGG - chr7_2:48049947-48049966 Msa1060260:intron 20.0%
!!! ATTATATTGATAGTATACTG+TGG + chr7_2:48049979-48049998 None:intergenic 20.0%
!!! ATGGTTTTAGATATTGAAAA+GGG + chr7_2:48050188-48050207 None:intergenic 20.0%
!! AAAAGGGTTAATTAAGTAAA+CGG - chr7_2:48050258-48050277 Msa1060260:exon 20.0%
!! AAAATAAAATGAGGGATATA+AGG + chr7_2:48048257-48048276 None:intergenic 20.0%
!! ATTATGAACTTTCATATAGT+TGG - chr7_2:48048764-48048783 Msa1060260:intron 20.0%
!!! TTGAACTTTCATATAGTTTT+AGG - chr7_2:48048833-48048852 Msa1060260:intron 20.0%
!!! AAACACTATTTTTAGGTTAA+AGG - chr7_2:48049021-48049040 Msa1060260:intron 20.0%
!!! AACACTATTTTTAGGTTAAA+GGG - chr7_2:48049022-48049041 Msa1060260:intron 20.0%
!! ATTGGAATAAATTTAGTTAC+AGG + chr7_2:48049094-48049113 None:intergenic 20.0%
!! AATTTATGAAGTTAACTTTC+TGG + chr7_2:48049148-48049167 None:intergenic 20.0%
!! AAAACTTCATAAATTGTTTG+TGG - chr7_2:48049181-48049200 Msa1060260:intron 20.0%
!!! TTTTTGGTTTAGAATATTCA+CGG - chr7_2:48049233-48049252 Msa1060260:intron 20.0%
!!! AAACAGATTTTCACAAAATT+AGG + chr7_2:48049525-48049544 None:intergenic 20.0%
!! TCAATAAAATGAATTGATGT+AGG - chr7_2:48049947-48049966 Msa1060260:intron 20.0%
!!! ATTATATTGATAGTATACTG+TGG + chr7_2:48049979-48049998 None:intergenic 20.0%
!!! ATGGTTTTAGATATTGAAAA+GGG + chr7_2:48050188-48050207 None:intergenic 20.0%
!! AAAAGGGTTAATTAAGTAAA+CGG - chr7_2:48050258-48050277 Msa1060260:exon 20.0%
! TATTCAAAAATGAAATCCTC+AGG + chr7_2:48048210-48048229 None:intergenic 25.0%
! TGAATACGAATGACTATTAT+GGG + chr7_2:48048459-48048478 None:intergenic 25.0%
! ATAATAGTCATTCGTATTCA+GGG - chr7_2:48048459-48048478 Msa1060260:CDS 25.0%
! GACAAAAAATCAAAACATCA+AGG + chr7_2:48048504-48048523 None:intergenic 25.0%
! AAATATGTTATGACTGTACA+GGG + chr7_2:48048526-48048545 None:intergenic 25.0%
! TTGTTGAACTTTCATATAGT+TGG - chr7_2:48048797-48048816 Msa1060260:intron 25.0%
! TTGTCAATCGAGAAATATAT+CGG + chr7_2:48049003-48049022 None:intergenic 25.0%
!!! GATTGACAAACACTATTTTT+AGG - chr7_2:48049014-48049033 Msa1060260:intron 25.0%
! TTCCACTTTATTAGAAAAAC+TGG - chr7_2:48049424-48049443 Msa1060260:intron 25.0%
!! AACCAGTTTTTCTAATAAAG+TGG + chr7_2:48049429-48049448 None:intergenic 25.0%
! TGCAAATCTTAAAACCATAA+AGG - chr7_2:48049557-48049576 Msa1060260:intron 25.0%
!!! CATGGTTTTAGATATTGAAA+AGG + chr7_2:48050189-48050208 None:intergenic 25.0%
! TAAAAAGGAAACTTCATTTC+AGG + chr7_2:48050219-48050238 None:intergenic 25.0%
! TTGAAGAACTCATCATAAAA+AGG + chr7_2:48050234-48050253 None:intergenic 25.0%
! ATGAGTTCTTCAAAAAGAAA+AGG - chr7_2:48050241-48050260 Msa1060260:CDS 25.0%
! TGAGTTCTTCAAAAAGAAAA+GGG - chr7_2:48050242-48050261 Msa1060260:CDS 25.0%
! TATTCAAAAATGAAATCCTC+AGG + chr7_2:48048210-48048229 None:intergenic 25.0%
! TGAATACGAATGACTATTAT+GGG + chr7_2:48048459-48048478 None:intergenic 25.0%
! ATAATAGTCATTCGTATTCA+GGG - chr7_2:48048459-48048478 Msa1060260:CDS 25.0%
! GACAAAAAATCAAAACATCA+AGG + chr7_2:48048504-48048523 None:intergenic 25.0%
! AAATATGTTATGACTGTACA+GGG + chr7_2:48048526-48048545 None:intergenic 25.0%
! TTGTTGAACTTTCATATAGT+TGG - chr7_2:48048797-48048816 Msa1060260:intron 25.0%
! TTGTCAATCGAGAAATATAT+CGG + chr7_2:48049003-48049022 None:intergenic 25.0%
!!! GATTGACAAACACTATTTTT+AGG - chr7_2:48049014-48049033 Msa1060260:intron 25.0%
! TTCCACTTTATTAGAAAAAC+TGG - chr7_2:48049424-48049443 Msa1060260:intron 25.0%
!! AACCAGTTTTTCTAATAAAG+TGG + chr7_2:48049429-48049448 None:intergenic 25.0%
! TGCAAATCTTAAAACCATAA+AGG - chr7_2:48049557-48049576 Msa1060260:intron 25.0%
!!! CATGGTTTTAGATATTGAAA+AGG + chr7_2:48050189-48050208 None:intergenic 25.0%
! TAAAAAGGAAACTTCATTTC+AGG + chr7_2:48050219-48050238 None:intergenic 25.0%
! TTGAAGAACTCATCATAAAA+AGG + chr7_2:48050234-48050253 None:intergenic 25.0%
! ATGAGTTCTTCAAAAAGAAA+AGG - chr7_2:48050241-48050260 Msa1060260:CDS 25.0%
! TGAGTTCTTCAAAAAGAAAA+GGG - chr7_2:48050242-48050261 Msa1060260:CDS 25.0%
!!! TTAGCTGGAAACTTTTTTTC+TGG + chr7_2:48048161-48048180 None:intergenic 30.0%
AGAAAAAAAGTTTCCAGCTA+AGG - chr7_2:48048160-48048179 Msa1060260:three_prime_UTR 30.0%
!! TCATTTTTGAATATCGCAAC+AGG - chr7_2:48048217-48048236 Msa1060260:three_prime_UTR 30.0%
! CATTTTTGAATATCGCAACA+GGG - chr7_2:48048218-48048237 Msa1060260:three_prime_UTR 30.0%
ACCTTATTAGAATGAAACGA+AGG - chr7_2:48048391-48048410 Msa1060260:CDS 30.0%
CCTTATTAGAATGAAACGAA+GGG - chr7_2:48048392-48048411 Msa1060260:CDS 30.0%
! ACTATTATGGGTTTGTTCTT+TGG + chr7_2:48048447-48048466 None:intergenic 30.0%
CTGAATACGAATGACTATTA+TGG + chr7_2:48048460-48048479 None:intergenic 30.0%
CATAATAGTCATTCGTATTC+AGG - chr7_2:48048458-48048477 Msa1060260:CDS 30.0%
TAATAGTCATTCGTATTCAG+GGG - chr7_2:48048460-48048479 Msa1060260:CDS 30.0%
GAAATATGTTATGACTGTAC+AGG + chr7_2:48048527-48048546 None:intergenic 30.0%
!! CTTTTGCTCTATTTGCTTTT+AGG - chr7_2:48048546-48048565 Msa1060260:CDS 30.0%
TGAACTTTCATATAGTTGGA+AGG - chr7_2:48048768-48048787 Msa1060260:intron 30.0%
GAACTTTCATATAGTTGGAA+GGG - chr7_2:48048769-48048788 Msa1060260:intron 30.0%
TGAACTTTCATATAGTTGGA+AGG - chr7_2:48048768-48048787 Msa1060260:intron 30.0%
GAACTTTCATATAGTTGGAA+GGG - chr7_2:48048769-48048788 Msa1060260:intron 30.0%
ACACTATTTAGTACAGATAG+AGG - chr7_2:48048942-48048961 Msa1060260:intron 30.0%
TTAGAATATTCACGGAAGAT+TGG - chr7_2:48049241-48049260 Msa1060260:intron 30.0%
TATGTAAAGTAGTGCACATA+TGG - chr7_2:48049394-48049413 Msa1060260:intron 30.0%
ATAAGGTTATTGTCTGTCAA+AGG + chr7_2:48049630-48049649 None:intergenic 30.0%
TATGTATTACCTGCTCAATA+AGG + chr7_2:48049647-48049666 None:intergenic 30.0%
ACAAAAACAATTCAGTGAGT+GGG + chr7_2:48049703-48049722 None:intergenic 30.0%
TACAAAAACAATTCAGTGAG+TGG + chr7_2:48049704-48049723 None:intergenic 30.0%
! CAATATAATCACAGTGTTGA+TGG - chr7_2:48049990-48050009 Msa1060260:intron 30.0%
AAATCATCAAAATCCATGTG+AGG + chr7_2:48050026-48050045 None:intergenic 30.0%
TATCTTTGTGCCTTCATTTA+TGG - chr7_2:48050067-48050086 Msa1060260:intron 30.0%
!! TTATTTGGGTTAGTAGAGAA+AGG - chr7_2:48050115-48050134 Msa1060260:CDS 30.0%
!! TATTTGGGTTAGTAGAGAAA+GGG - chr7_2:48050116-48050135 Msa1060260:CDS 30.0%
TTCATTTCAGGACATAAACA+TGG + chr7_2:48050207-48050226 None:intergenic 30.0%
!!! TTAGCTGGAAACTTTTTTTC+TGG + chr7_2:48048161-48048180 None:intergenic 30.0%
AGAAAAAAAGTTTCCAGCTA+AGG - chr7_2:48048160-48048179 Msa1060260:three_prime_UTR 30.0%
!! TCATTTTTGAATATCGCAAC+AGG - chr7_2:48048217-48048236 Msa1060260:three_prime_UTR 30.0%
! CATTTTTGAATATCGCAACA+GGG - chr7_2:48048218-48048237 Msa1060260:three_prime_UTR 30.0%
ACCTTATTAGAATGAAACGA+AGG - chr7_2:48048391-48048410 Msa1060260:CDS 30.0%
CCTTATTAGAATGAAACGAA+GGG - chr7_2:48048392-48048411 Msa1060260:CDS 30.0%
! ACTATTATGGGTTTGTTCTT+TGG + chr7_2:48048447-48048466 None:intergenic 30.0%
CTGAATACGAATGACTATTA+TGG + chr7_2:48048460-48048479 None:intergenic 30.0%
CATAATAGTCATTCGTATTC+AGG - chr7_2:48048458-48048477 Msa1060260:CDS 30.0%
TAATAGTCATTCGTATTCAG+GGG - chr7_2:48048460-48048479 Msa1060260:CDS 30.0%
GAAATATGTTATGACTGTAC+AGG + chr7_2:48048527-48048546 None:intergenic 30.0%
!! CTTTTGCTCTATTTGCTTTT+AGG - chr7_2:48048546-48048565 Msa1060260:CDS 30.0%
TGAACTTTCATATAGTTGGA+AGG - chr7_2:48048768-48048787 Msa1060260:intron 30.0%
GAACTTTCATATAGTTGGAA+GGG - chr7_2:48048769-48048788 Msa1060260:intron 30.0%
TGAACTTTCATATAGTTGGA+AGG - chr7_2:48048768-48048787 Msa1060260:intron 30.0%
GAACTTTCATATAGTTGGAA+GGG - chr7_2:48048769-48048788 Msa1060260:intron 30.0%
ACACTATTTAGTACAGATAG+AGG - chr7_2:48048942-48048961 Msa1060260:intron 30.0%
TTAGAATATTCACGGAAGAT+TGG - chr7_2:48049241-48049260 Msa1060260:intron 30.0%
TATGTAAAGTAGTGCACATA+TGG - chr7_2:48049394-48049413 Msa1060260:intron 30.0%
ATAAGGTTATTGTCTGTCAA+AGG + chr7_2:48049630-48049649 None:intergenic 30.0%
TATGTATTACCTGCTCAATA+AGG + chr7_2:48049647-48049666 None:intergenic 30.0%
ACAAAAACAATTCAGTGAGT+GGG + chr7_2:48049703-48049722 None:intergenic 30.0%
TACAAAAACAATTCAGTGAG+TGG + chr7_2:48049704-48049723 None:intergenic 30.0%
! CAATATAATCACAGTGTTGA+TGG - chr7_2:48049990-48050009 Msa1060260:intron 30.0%
AAATCATCAAAATCCATGTG+AGG + chr7_2:48050026-48050045 None:intergenic 30.0%
TATCTTTGTGCCTTCATTTA+TGG - chr7_2:48050067-48050086 Msa1060260:intron 30.0%
!! TTATTTGGGTTAGTAGAGAA+AGG - chr7_2:48050115-48050134 Msa1060260:CDS 30.0%
!! TATTTGGGTTAGTAGAGAAA+GGG - chr7_2:48050116-48050135 Msa1060260:CDS 30.0%
TTCATTTCAGGACATAAACA+TGG + chr7_2:48050207-48050226 None:intergenic 30.0%
GGAATATAGTTGAGATCCTT+TGG + chr7_2:48048075-48048094 None:intergenic 35.0%
CTCTTCTTCAATATAACCTC+TGG + chr7_2:48048096-48048115 None:intergenic 35.0%
CAGAGGTTATATTGAAGAAG+AGG - chr7_2:48048094-48048113 Msa1060260:three_prime_UTR 35.0%
!!! AGGCTTTTTTATGAAGTCCT+TGG + chr7_2:48048190-48048209 None:intergenic 35.0%
CCCTTCGTTTCATTCTAATA+AGG + chr7_2:48048395-48048414 None:intergenic 35.0%
!! AGAAAGCACTTGTTCAGTTT+GGG - chr7_2:48048593-48048612 Msa1060260:intron 35.0%
TTGAACCATATGTCACCTAT+GGG - chr7_2:48048684-48048703 Msa1060260:CDS 35.0%
TTAAAATTTCGCTACCCACA+CGG + chr7_2:48048976-48048995 None:intergenic 35.0%
TTAACTTTCTGGACAGAAGA+AGG + chr7_2:48049137-48049156 None:intergenic 35.0%
TCCTCAGCAAACTGAAATTT+GGG + chr7_2:48049497-48049516 None:intergenic 35.0%
ATCCTCAGCAAACTGAAATT+TGG + chr7_2:48049498-48049517 None:intergenic 35.0%
CTTGTAAATCAGCTCCTTTA+TGG + chr7_2:48049574-48049593 None:intergenic 35.0%
! AAAGGAGCTGATTTACAAGA+AGG - chr7_2:48049575-48049594 Msa1060260:intron 35.0%
! AAGGAGCTGATTTACAAGAA+GGG - chr7_2:48049576-48049595 Msa1060260:intron 35.0%
AGACAATAACCTTATTGAGC+AGG - chr7_2:48049635-48049654 Msa1060260:CDS 35.0%
TTGAGCAGGTAATACATACA+TGG - chr7_2:48049649-48049668 Msa1060260:CDS 35.0%
CAAAGGAAAACTAGGAATCT+AGG + chr7_2:48049679-48049698 None:intergenic 35.0%
AATTCCTACATGGCAAAAAG+TGG + chr7_2:48049733-48049752 None:intergenic 35.0%
! ACTTTTTGCCATGTAGGAAT+TGG - chr7_2:48049732-48049751 Msa1060260:CDS 35.0%
! CTTTTTGCCATGTAGGAATT+GGG - chr7_2:48049733-48049752 Msa1060260:CDS 35.0%
AAACTTTCCCAATTCCTACA+TGG + chr7_2:48049743-48049762 None:intergenic 35.0%
ATGTAGGAATTGGGAAAGTT+TGG - chr7_2:48049742-48049761 Msa1060260:CDS 35.0%
GTGCATCAAATTGACAATGT+TGG - chr7_2:48049787-48049806 Msa1060260:intron 35.0%
AGGATTGAAAAACCGATACA+AGG - chr7_2:48049879-48049898 Msa1060260:CDS 35.0%
TTGAAAAACCGATACAAGGA+TGG - chr7_2:48049883-48049902 Msa1060260:CDS 35.0%
CAGCTAAAAGCCATAAATGA+AGG + chr7_2:48050080-48050099 None:intergenic 35.0%
GGAATATAGTTGAGATCCTT+TGG + chr7_2:48048075-48048094 None:intergenic 35.0%
CTCTTCTTCAATATAACCTC+TGG + chr7_2:48048096-48048115 None:intergenic 35.0%
CAGAGGTTATATTGAAGAAG+AGG - chr7_2:48048094-48048113 Msa1060260:three_prime_UTR 35.0%
!!! AGGCTTTTTTATGAAGTCCT+TGG + chr7_2:48048190-48048209 None:intergenic 35.0%
CCCTTCGTTTCATTCTAATA+AGG + chr7_2:48048395-48048414 None:intergenic 35.0%
!! AGAAAGCACTTGTTCAGTTT+GGG - chr7_2:48048593-48048612 Msa1060260:intron 35.0%
TTGAACCATATGTCACCTAT+GGG - chr7_2:48048684-48048703 Msa1060260:CDS 35.0%
TTAAAATTTCGCTACCCACA+CGG + chr7_2:48048976-48048995 None:intergenic 35.0%
TTAACTTTCTGGACAGAAGA+AGG + chr7_2:48049137-48049156 None:intergenic 35.0%
TCCTCAGCAAACTGAAATTT+GGG + chr7_2:48049497-48049516 None:intergenic 35.0%
ATCCTCAGCAAACTGAAATT+TGG + chr7_2:48049498-48049517 None:intergenic 35.0%
CTTGTAAATCAGCTCCTTTA+TGG + chr7_2:48049574-48049593 None:intergenic 35.0%
! AAAGGAGCTGATTTACAAGA+AGG - chr7_2:48049575-48049594 Msa1060260:intron 35.0%
! AAGGAGCTGATTTACAAGAA+GGG - chr7_2:48049576-48049595 Msa1060260:intron 35.0%
AGACAATAACCTTATTGAGC+AGG - chr7_2:48049635-48049654 Msa1060260:CDS 35.0%
TTGAGCAGGTAATACATACA+TGG - chr7_2:48049649-48049668 Msa1060260:CDS 35.0%
CAAAGGAAAACTAGGAATCT+AGG + chr7_2:48049679-48049698 None:intergenic 35.0%
AATTCCTACATGGCAAAAAG+TGG + chr7_2:48049733-48049752 None:intergenic 35.0%
! ACTTTTTGCCATGTAGGAAT+TGG - chr7_2:48049732-48049751 Msa1060260:CDS 35.0%
! CTTTTTGCCATGTAGGAATT+GGG - chr7_2:48049733-48049752 Msa1060260:CDS 35.0%
AAACTTTCCCAATTCCTACA+TGG + chr7_2:48049743-48049762 None:intergenic 35.0%
ATGTAGGAATTGGGAAAGTT+TGG - chr7_2:48049742-48049761 Msa1060260:CDS 35.0%
GTGCATCAAATTGACAATGT+TGG - chr7_2:48049787-48049806 Msa1060260:intron 35.0%
AGGATTGAAAAACCGATACA+AGG - chr7_2:48049879-48049898 Msa1060260:CDS 35.0%
TTGAAAAACCGATACAAGGA+TGG - chr7_2:48049883-48049902 Msa1060260:CDS 35.0%
CAGCTAAAAGCCATAAATGA+AGG + chr7_2:48050080-48050099 None:intergenic 35.0%
GCAGTGAAAACTTGAGAAGA+TGG - chr7_2:48048035-48048054 Msa1060260:three_prime_UTR 40.0%
GGATCTCAACTATATTCCAG+AGG - chr7_2:48048077-48048096 Msa1060260:three_prime_UTR 40.0%
GGACTTCATAAAAAAGCCTG+AGG - chr7_2:48048191-48048210 Msa1060260:three_prime_UTR 40.0%
ATGACTTCTATCACTTGTGC+AGG - chr7_2:48048362-48048381 Msa1060260:exon 40.0%
CAAACTGAACAAGTGCTTTC+TGG + chr7_2:48048594-48048613 None:intergenic 40.0%
!! CAGAAAGCACTTGTTCAGTT+TGG - chr7_2:48048592-48048611 Msa1060260:intron 40.0%
GTTGAACCATATGTCACCTA+TGG - chr7_2:48048683-48048702 Msa1060260:CDS 40.0%
TCAATCTATCGCTTACCCAT+AGG + chr7_2:48048702-48048721 None:intergenic 40.0%
ACTATTGTGCTATAGCGTAG+AGG - chr7_2:48048889-48048908 Msa1060260:intron 40.0%
! TTCACGGAAGATTGGTTACT+TGG - chr7_2:48049249-48049268 Msa1060260:intron 40.0%
! GATTGGTTACTTGGAGATCA+AGG - chr7_2:48049258-48049277 Msa1060260:intron 40.0%
CAGATGCTTGCAACTATGTT+AGG - chr7_2:48049296-48049315 Msa1060260:intron 40.0%
GCTTGCAACTATGTTAGGAA+AGG - chr7_2:48049301-48049320 Msa1060260:intron 40.0%
CTCTGCTATTAGTACACATG+AGG + chr7_2:48049338-48049357 None:intergenic 40.0%
CACAGGAAAGTAAAGATGCA+AGG + chr7_2:48049461-48049480 None:intergenic 40.0%
TGGGGATAATGCATATACAC+AGG + chr7_2:48049478-48049497 None:intergenic 40.0%
CCTCAGCAAACTGAAATTTG+GGG + chr7_2:48049496-48049515 None:intergenic 40.0%
!!! TGTTCCACTTTTTGCCATGT+AGG - chr7_2:48049726-48049745 Msa1060260:CDS 40.0%
AGGAAGTTGTCCGATTTATG+TGG - chr7_2:48049821-48049840 Msa1060260:intron 40.0%
GTTCAAAGGGCCACATAAAT+CGG + chr7_2:48049834-48049853 None:intergenic 40.0%
! AATCCTTTTAATCCCTCTGC+TGG + chr7_2:48049865-48049884 None:intergenic 40.0%
AAAAACCGATACAAGGATGG+TGG - chr7_2:48049886-48049905 Msa1060260:CDS 40.0%
AATCTCCACCATCCTTGTAT+CGG + chr7_2:48049894-48049913 None:intergenic 40.0%
!! ATCACAGTGTTGATGGTTTG+TGG - chr7_2:48049997-48050016 Msa1060260:intron 40.0%
TGTACTTGAAACCATGCTGT+AGG - chr7_2:48050158-48050177 Msa1060260:CDS 40.0%
GCAGTGAAAACTTGAGAAGA+TGG - chr7_2:48048035-48048054 Msa1060260:three_prime_UTR 40.0%
GGATCTCAACTATATTCCAG+AGG - chr7_2:48048077-48048096 Msa1060260:three_prime_UTR 40.0%
GGACTTCATAAAAAAGCCTG+AGG - chr7_2:48048191-48048210 Msa1060260:three_prime_UTR 40.0%
ATGACTTCTATCACTTGTGC+AGG - chr7_2:48048362-48048381 Msa1060260:exon 40.0%
CAAACTGAACAAGTGCTTTC+TGG + chr7_2:48048594-48048613 None:intergenic 40.0%
!! CAGAAAGCACTTGTTCAGTT+TGG - chr7_2:48048592-48048611 Msa1060260:intron 40.0%
GTTGAACCATATGTCACCTA+TGG - chr7_2:48048683-48048702 Msa1060260:CDS 40.0%
TCAATCTATCGCTTACCCAT+AGG + chr7_2:48048702-48048721 None:intergenic 40.0%
ACTATTGTGCTATAGCGTAG+AGG - chr7_2:48048889-48048908 Msa1060260:intron 40.0%
! TTCACGGAAGATTGGTTACT+TGG - chr7_2:48049249-48049268 Msa1060260:intron 40.0%
! GATTGGTTACTTGGAGATCA+AGG - chr7_2:48049258-48049277 Msa1060260:intron 40.0%
CAGATGCTTGCAACTATGTT+AGG - chr7_2:48049296-48049315 Msa1060260:intron 40.0%
GCTTGCAACTATGTTAGGAA+AGG - chr7_2:48049301-48049320 Msa1060260:intron 40.0%
CTCTGCTATTAGTACACATG+AGG + chr7_2:48049338-48049357 None:intergenic 40.0%
CACAGGAAAGTAAAGATGCA+AGG + chr7_2:48049461-48049480 None:intergenic 40.0%
TGGGGATAATGCATATACAC+AGG + chr7_2:48049478-48049497 None:intergenic 40.0%
CCTCAGCAAACTGAAATTTG+GGG + chr7_2:48049496-48049515 None:intergenic 40.0%
!!! TGTTCCACTTTTTGCCATGT+AGG - chr7_2:48049726-48049745 Msa1060260:CDS 40.0%
AGGAAGTTGTCCGATTTATG+TGG - chr7_2:48049821-48049840 Msa1060260:intron 40.0%
GTTCAAAGGGCCACATAAAT+CGG + chr7_2:48049834-48049853 None:intergenic 40.0%
! AATCCTTTTAATCCCTCTGC+TGG + chr7_2:48049865-48049884 None:intergenic 40.0%
AAAAACCGATACAAGGATGG+TGG - chr7_2:48049886-48049905 Msa1060260:CDS 40.0%
AATCTCCACCATCCTTGTAT+CGG + chr7_2:48049894-48049913 None:intergenic 40.0%
!! ATCACAGTGTTGATGGTTTG+TGG - chr7_2:48049997-48050016 Msa1060260:intron 40.0%
TGTACTTGAAACCATGCTGT+AGG - chr7_2:48050158-48050177 Msa1060260:CDS 40.0%
ACTTGAGAAGATGGCTGAAG+AGG - chr7_2:48048044-48048063 Msa1060260:three_prime_UTR 45.0%
AGAGGAAACACAGTGAAGCA+TGG - chr7_2:48048112-48048131 Msa1060260:three_prime_UTR 45.0%
GAGGAAACACAGTGAAGCAT+GGG - chr7_2:48048113-48048132 Msa1060260:three_prime_UTR 45.0%
AGCATGGGCCTTGAGTAAAA+AGG - chr7_2:48048128-48048147 Msa1060260:three_prime_UTR 45.0%
! GAGTTGCGCCTTTTTACTCA+AGG + chr7_2:48048139-48048158 None:intergenic 45.0%
TTTCCAGCTAAGGAAGTCCA+AGG - chr7_2:48048170-48048189 Msa1060260:three_prime_UTR 45.0%
GAATGAAACGAAGGGTCAAG+TGG - chr7_2:48048400-48048419 Msa1060260:CDS 45.0%
GTCTTTGTGAAGCCAACTGA+TGG - chr7_2:48048638-48048657 Msa1060260:intron 45.0%
GCTTACCCATAGGTGACATA+TGG + chr7_2:48048692-48048711 None:intergenic 45.0%
! ATGAGAGGCAGCTAGTCTAT+TGG + chr7_2:48049112-48049131 None:intergenic 45.0%
GGACAGAAGAAGGATATGAG+AGG + chr7_2:48049127-48049146 None:intergenic 45.0%
GCATCATGTGTGACATGCAT+AGG + chr7_2:48049365-48049384 None:intergenic 45.0%
!! CCCCAAATTTCAGTTTGCTG+AGG - chr7_2:48049493-48049512 Msa1060260:intron 45.0%
GAGTGGGTCAAAGGAAAACT+AGG + chr7_2:48049687-48049706 None:intergenic 45.0%
CAATTCAGTGAGTGGGTCAA+AGG + chr7_2:48049696-48049715 None:intergenic 45.0%
CAATGTTGGTCCACACTTCA+AGG - chr7_2:48049801-48049820 Msa1060260:intron 45.0%
!! GCTGGCTTGTTCAGTTCAAA+GGG + chr7_2:48049847-48049866 None:intergenic 45.0%
!! TGCTGGCTTGTTCAGTTCAA+AGG + chr7_2:48049848-48049867 None:intergenic 45.0%
AAGCCAGCAGAGGGATTAAA+AGG - chr7_2:48049859-48049878 Msa1060260:CDS 45.0%
!! TACAAGGATGGTGGAGATTC+AGG - chr7_2:48049895-48049914 Msa1060260:CDS 45.0%
!! ACAAGGATGGTGGAGATTCA+GGG - chr7_2:48049896-48049915 Msa1060260:CDS 45.0%
! GGGTTAGTAGAGAAAGGGAT+TGG - chr7_2:48050121-48050140 Msa1060260:CDS 45.0%
ACTTGAGAAGATGGCTGAAG+AGG - chr7_2:48048044-48048063 Msa1060260:three_prime_UTR 45.0%
AGAGGAAACACAGTGAAGCA+TGG - chr7_2:48048112-48048131 Msa1060260:three_prime_UTR 45.0%
GAGGAAACACAGTGAAGCAT+GGG - chr7_2:48048113-48048132 Msa1060260:three_prime_UTR 45.0%
AGCATGGGCCTTGAGTAAAA+AGG - chr7_2:48048128-48048147 Msa1060260:three_prime_UTR 45.0%
! GAGTTGCGCCTTTTTACTCA+AGG + chr7_2:48048139-48048158 None:intergenic 45.0%
TTTCCAGCTAAGGAAGTCCA+AGG - chr7_2:48048170-48048189 Msa1060260:three_prime_UTR 45.0%
GAATGAAACGAAGGGTCAAG+TGG - chr7_2:48048400-48048419 Msa1060260:CDS 45.0%
GTCTTTGTGAAGCCAACTGA+TGG - chr7_2:48048638-48048657 Msa1060260:intron 45.0%
GCTTACCCATAGGTGACATA+TGG + chr7_2:48048692-48048711 None:intergenic 45.0%
! ATGAGAGGCAGCTAGTCTAT+TGG + chr7_2:48049112-48049131 None:intergenic 45.0%
GGACAGAAGAAGGATATGAG+AGG + chr7_2:48049127-48049146 None:intergenic 45.0%
GCATCATGTGTGACATGCAT+AGG + chr7_2:48049365-48049384 None:intergenic 45.0%
!! CCCCAAATTTCAGTTTGCTG+AGG - chr7_2:48049493-48049512 Msa1060260:intron 45.0%
GAGTGGGTCAAAGGAAAACT+AGG + chr7_2:48049687-48049706 None:intergenic 45.0%
CAATTCAGTGAGTGGGTCAA+AGG + chr7_2:48049696-48049715 None:intergenic 45.0%
CAATGTTGGTCCACACTTCA+AGG - chr7_2:48049801-48049820 Msa1060260:intron 45.0%
!! GCTGGCTTGTTCAGTTCAAA+GGG + chr7_2:48049847-48049866 None:intergenic 45.0%
!! TGCTGGCTTGTTCAGTTCAA+AGG + chr7_2:48049848-48049867 None:intergenic 45.0%
AAGCCAGCAGAGGGATTAAA+AGG - chr7_2:48049859-48049878 Msa1060260:CDS 45.0%
!! TACAAGGATGGTGGAGATTC+AGG - chr7_2:48049895-48049914 Msa1060260:CDS 45.0%
!! ACAAGGATGGTGGAGATTCA+GGG - chr7_2:48049896-48049915 Msa1060260:CDS 45.0%
! GGGTTAGTAGAGAAAGGGAT+TGG - chr7_2:48050121-48050140 Msa1060260:CDS 45.0%
GGCTGAAGAGGAACAACCAA+AGG - chr7_2:48048056-48048075 Msa1060260:three_prime_UTR 50.0%
AGTCCTTGGACTTCCTTAGC+TGG + chr7_2:48048176-48048195 None:intergenic 50.0%
AACGAAGGGTCAAGTGGAGA+CGG - chr7_2:48048406-48048425 Msa1060260:CDS 50.0%
GAAGCCAACTGATGGAGTGA+TGG - chr7_2:48048646-48048665 Msa1060260:intron 50.0%
TTGGCCATCACTCCATCAGT+TGG + chr7_2:48048653-48048672 None:intergenic 50.0%
!! ATAGAGGCACTATAGCCGTG+TGG - chr7_2:48048958-48048977 Msa1060260:intron 50.0%
!! TAGAGGCACTATAGCCGTGT+GGG - chr7_2:48048959-48048978 Msa1060260:intron 50.0%
CGGACAACTTCCTTGAAGTG+TGG + chr7_2:48049814-48049833 None:intergenic 50.0%
TGAACTGAACAAGCCAGCAG+AGG - chr7_2:48049849-48049868 Msa1060260:CDS 50.0%
GAACTGAACAAGCCAGCAGA+GGG - chr7_2:48049850-48049869 Msa1060260:CDS 50.0%
!! CAAGGATGGTGGAGATTCAG+GGG - chr7_2:48049897-48049916 Msa1060260:CDS 50.0%
! GCTCGTTGATGAGATCCTCA+CGG + chr7_2:48049924-48049943 None:intergenic 50.0%
! TGGTTTGTGGTGTCCTCACA+TGG - chr7_2:48050010-48050029 Msa1060260:intron 50.0%
!! AAAAGGGAGCACCTACAGCA+TGG + chr7_2:48050172-48050191 None:intergenic 50.0%
GGCTGAAGAGGAACAACCAA+AGG - chr7_2:48048056-48048075 Msa1060260:three_prime_UTR 50.0%
AGTCCTTGGACTTCCTTAGC+TGG + chr7_2:48048176-48048195 None:intergenic 50.0%
AACGAAGGGTCAAGTGGAGA+CGG - chr7_2:48048406-48048425 Msa1060260:CDS 50.0%
GAAGCCAACTGATGGAGTGA+TGG - chr7_2:48048646-48048665 Msa1060260:intron 50.0%
TTGGCCATCACTCCATCAGT+TGG + chr7_2:48048653-48048672 None:intergenic 50.0%
!! ATAGAGGCACTATAGCCGTG+TGG - chr7_2:48048958-48048977 Msa1060260:intron 50.0%
!! TAGAGGCACTATAGCCGTGT+GGG - chr7_2:48048959-48048978 Msa1060260:intron 50.0%
CGGACAACTTCCTTGAAGTG+TGG + chr7_2:48049814-48049833 None:intergenic 50.0%
TGAACTGAACAAGCCAGCAG+AGG - chr7_2:48049849-48049868 Msa1060260:CDS 50.0%
GAACTGAACAAGCCAGCAGA+GGG - chr7_2:48049850-48049869 Msa1060260:CDS 50.0%
!! CAAGGATGGTGGAGATTCAG+GGG - chr7_2:48049897-48049916 Msa1060260:CDS 50.0%
! GCTCGTTGATGAGATCCTCA+CGG + chr7_2:48049924-48049943 None:intergenic 50.0%
! TGGTTTGTGGTGTCCTCACA+TGG - chr7_2:48050010-48050029 Msa1060260:intron 50.0%
!! AAAAGGGAGCACCTACAGCA+TGG + chr7_2:48050172-48050191 None:intergenic 50.0%
ACGAAGGGTCAAGTGGAGAC+GGG - chr7_2:48048407-48048426 Msa1060260:CDS 55.0%
TGATGGAGTGATGGCCAAGC+TGG - chr7_2:48048655-48048674 Msa1060260:intron 55.0%
TGGTTCAACTCTCGCCAGCT+TGG + chr7_2:48048672-48048691 None:intergenic 55.0%
ACGAAGGGTCAAGTGGAGAC+GGG - chr7_2:48048407-48048426 Msa1060260:CDS 55.0%
TGATGGAGTGATGGCCAAGC+TGG - chr7_2:48048655-48048674 Msa1060260:intron 55.0%
TGGTTCAACTCTCGCCAGCT+TGG + chr7_2:48048672-48048691 None:intergenic 55.0%
CGAAGGGTCAAGTGGAGACG+GGG - chr7_2:48048408-48048427 Msa1060260:CDS 60.0%
TGGAGATTCAGGGGACCGTG+AGG - chr7_2:48049906-48049925 Msa1060260:CDS 60.0%
CGAAGGGTCAAGTGGAGACG+GGG - chr7_2:48048408-48048427 Msa1060260:CDS 60.0%
TGGAGATTCAGGGGACCGTG+AGG - chr7_2:48049906-48049925 Msa1060260:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 48048032 48050298 48048032 ID=Msa1060260;Name=Msa1060260
chr7_2 mRNA 48048032 48050298 48048032 ID=Msa1060260-mRNA-1;Parent=Msa1060260;Name=Msa1060260-mRNA-1;_AED=0.06;_eAED=0.06;_QI=22|1|1|1|1|1|5|335|246
chr7_2 exon 48048032 48048582 48048032 ID=Msa1060260-mRNA-1:exon:8679;Parent=Msa1060260-mRNA-1
chr7_2 exon 48048674 48048776 48048674 ID=Msa1060260-mRNA-1:exon:8678;Parent=Msa1060260-mRNA-1
chr7_2 exon 48049625 48049762 48049625 ID=Msa1060260-mRNA-1:exon:8677;Parent=Msa1060260-mRNA-1
chr7_2 exon 48049849 48049946 48049849 ID=Msa1060260-mRNA-1:exon:8676;Parent=Msa1060260-mRNA-1
chr7_2 exon 48050091 48050298 48050091 ID=Msa1060260-mRNA-1:exon:8675;Parent=Msa1060260-mRNA-1
chr7_2 five_prime_UTR 48050277 48050298 48050277 ID=Msa1060260-mRNA-1:five_prime_utr;Parent=Msa1060260-mRNA-1
chr7_2 CDS 48050091 48050276 48050091 ID=Msa1060260-mRNA-1:cds;Parent=Msa1060260-mRNA-1
chr7_2 CDS 48049849 48049946 48049849 ID=Msa1060260-mRNA-1:cds;Parent=Msa1060260-mRNA-1
chr7_2 CDS 48049625 48049762 48049625 ID=Msa1060260-mRNA-1:cds;Parent=Msa1060260-mRNA-1
chr7_2 CDS 48048674 48048776 48048674 ID=Msa1060260-mRNA-1:cds;Parent=Msa1060260-mRNA-1
chr7_2 CDS 48048367 48048582 48048367 ID=Msa1060260-mRNA-1:cds;Parent=Msa1060260-mRNA-1
chr7_2 three_prime_UTR 48048032 48048366 48048032 ID=Msa1060260-mRNA-1:three_prime_utr;Parent=Msa1060260-mRNA-1
Gene Sequence

>Msa1060260

ATGGCTGAAGAGGAACAACCAAAGGATCTCAACTATATTCCAGAGGTTATATTGAAGAAGAGGAAACACAGTGAAGCATGGGCCTTGAGTAAAAAGGCGCAACTCCAGAAAAAAAGTTTCCAGCTAAGGAAGTCCAAGGACTTCATAAAAAAGCCTGAGGATTTCATTTTTGAATATCGCAACAGGGAGATTGACCTTATTAGAATGAAACGAAGGGTCAAGTGGAGACGGGGAGATAAATCAAAGCCAAAGAACAAACCCATAATAGTCATTCGTATTCAGGGGAAACAAGACATGCATGCTACAACCAGAAAGCACTTGTTCAGTTTGGGATTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGCCAACTGATGGAGTGATGGCCAAGCTGGCGAGAGTTGAACCATATGTCACCTATGGATATGCAAATCTTAAAACCATAAAGGAGCTGATTTACAAGAAGGGACATGCAAAAATAGACAAGCGAAAAGTTCCTTTGACAGACAATAACCTTATTGAGCAGGAATTGGGAAAGTTTGGTATTGTATGCATAGAAGACATTGTGCATCAAATTGACAATGTTGGTCCACACTTCAAGGAAGTTGTCCGATTTATGTGGCCCTTTGAACTGAACAAGCCAGCAGAGGGATTAAAAGGATTGAAAAACCGATACAAGGATGGTGGAGATTCAGGGGACCGTGAGGATCTCATCAACGAGCTCATCAATAAAATGAATTGA

Protein sequence

>Msa1060260

MAEEEQPKDLNYIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFIKKPEDFIFEYRNREIDLIRMKRRVKWRRGDKSKPKNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAVFVKPTDGVMAKLARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGKFGIVCIEDIVHQIDNVGPHFKEVVRFMWPFELNKPAEGLKGLKNRYKDGGDSGDREDLINELINKMN*