AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0756290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0756290 MtrunA17_Chr5g0401661 98.193 332 6 0 1 332 354 685 0.0 674
Msa0756290 MtrunA17_Chr5g0401661 29.730 148 75 4 165 293 333 470 2.22e-11 64.7
Msa0756290 MtrunA17_Chr5g0401671 87.952 332 38 1 1 332 266 595 0.0 610
Msa0756290 MtrunA17_Chr5g0401671 29.448 163 87 5 165 309 245 397 3.33e-12 67.4
Msa0756290 MtrunA17_Chr4g0053651 79.819 332 65 1 1 332 249 578 0.0 559
Msa0756290 MtrunA17_Chr4g0053651 29.487 156 83 5 165 303 228 373 5.75e-12 66.6
Msa0756290 MtrunA17_Chr3g0136971 29.487 234 153 4 72 302 406 630 3.38e-25 106
Msa0756290 MtrunA17_Chr3g0136971 29.524 210 137 4 122 329 415 615 1.08e-20 93.2
Msa0756290 MtrunA17_Chr3g0136971 24.862 181 134 2 49 227 467 647 1.29e-11 65.5
Msa0756290 MtrunA17_Chr3g0136971 24.561 228 124 4 133 331 325 533 3.87e-11 64.3
Msa0756290 MtrunA17_Chr6g0448921 29.537 281 168 9 57 327 31 291 2.62e-24 103
Msa0756290 MtrunA17_Chr6g0448921 28.902 173 112 3 160 330 9 172 6.92e-18 84.7
Msa0756290 MtrunA17_Chr6g0448921 23.280 189 134 2 120 306 10 189 1.12e-16 80.9
Msa0756290 MtrunA17_Chr7g0253861 27.863 262 167 7 80 329 51 302 7.38e-24 100
Msa0756290 MtrunA17_Chr7g0253861 26.190 294 155 9 46 286 58 342 4.80e-18 84.0
Msa0756290 MtrunA17_Chr7g0253861 33.143 175 106 4 159 331 47 212 3.14e-15 75.5
Msa0756290 MtrunA17_Chr1g0176241 33.871 248 139 9 46 287 253 481 9.10e-24 101
Msa0756290 MtrunA17_Chr1g0176241 24.242 363 201 9 1 318 138 471 1.35e-17 83.6
Msa0756290 MtrunA17_Chr1g0176241 23.867 331 174 10 78 331 113 442 2.25e-17 82.8
Msa0756290 MtrunA17_Chr1g0176241 27.948 229 148 7 76 302 78 291 3.43e-15 76.3
Msa0756290 MtrunA17_Chr2g0281451 31.304 230 141 5 57 281 30 247 3.69e-23 100
Msa0756290 MtrunA17_Chr2g0281451 27.411 197 133 2 100 295 32 219 1.02e-20 93.2
Msa0756290 MtrunA17_Chr2g0281451 23.780 164 116 1 140 303 31 185 7.24e-17 81.6
Msa0756290 MtrunA17_Chr2g0281451 29.480 173 111 4 160 330 8 171 1.01e-16 81.3
Msa0756290 MtrunA17_Chr1g0172501 28.017 232 158 2 58 288 330 553 5.88e-23 99.4
Msa0756290 MtrunA17_Chr1g0172501 24.549 277 177 7 38 301 267 524 1.66e-16 80.5
Msa0756290 MtrunA17_Chr1g0172501 26.087 184 116 5 149 331 264 428 5.00e-12 66.6
Msa0756290 MtrunA17_Chr4g0067151 26.962 293 193 8 1 288 46 322 7.14e-23 97.1
Msa0756290 MtrunA17_Chr4g0067151 26.160 237 155 4 76 301 19 246 3.04e-21 92.4
Msa0756290 MtrunA17_Chr4g0067151 26.786 168 104 3 161 318 21 179 2.00e-14 73.2
Msa0756290 MtrunA17_Chr3g0093681 27.586 232 159 2 58 288 330 553 3.35e-22 97.4
Msa0756290 MtrunA17_Chr3g0093681 24.549 277 177 7 38 301 267 524 4.29e-16 79.0
Msa0756290 MtrunA17_Chr3g0093681 26.087 184 116 5 149 331 264 428 4.14e-12 67.0
Msa0756290 MtrunA17_Chr3g0093681 27.011 174 115 4 160 331 307 470 9.60e-11 62.8
Msa0756290 MtrunA17_Chr1g0185501 24.444 225 159 3 79 301 22 237 4.23e-21 92.0
Msa0756290 MtrunA17_Chr1g0185501 27.239 268 179 7 25 287 56 312 2.24e-19 87.0
Msa0756290 MtrunA17_Chr1g0185501 31.447 159 99 2 161 318 21 170 5.36e-19 86.3
Msa0756290 MtrunA17_Chr1g0185501 31.405 121 73 2 208 327 26 137 1.18e-11 64.7
Msa0756290 MtrunA17_Chr1g0200901 26.772 254 137 7 37 289 116 321 6.48e-21 92.8
Msa0756290 MtrunA17_Chr1g0200901 22.222 225 158 7 79 297 75 288 2.45e-12 67.4
Msa0756290 MtrunA17_Chr1g0200901 32.117 137 78 4 202 332 73 200 6.75e-11 62.8
Msa0756290 MtrunA17_Chr5g0405851 26.840 231 160 2 59 288 228 450 4.62e-20 90.5
Msa0756290 MtrunA17_Chr5g0405851 29.710 138 88 1 160 297 246 374 3.70e-16 79.0
Msa0756290 MtrunA17_Chr5g0405851 25.843 178 119 4 164 331 151 325 3.75e-13 70.1
Msa0756290 MtrunA17_Chr8g0392701 29.098 244 157 7 76 310 7 243 8.95e-20 88.6
Msa0756290 MtrunA17_Chr8g0392701 26.275 255 158 8 57 296 30 269 9.30e-15 73.9
Msa0756290 MtrunA17_Chr1g0171711 27.778 234 153 7 78 308 503 723 1.22e-19 90.1
Msa0756290 MtrunA17_Chr7g0246741 25.733 307 158 7 45 329 371 629 3.88e-19 88.6
Msa0756290 MtrunA17_Chr4g0070791 26.000 300 185 9 57 330 32 320 2.13e-17 81.6
Msa0756290 MtrunA17_Chr4g0070791 25.110 227 150 5 37 246 96 319 6.40e-13 68.6
Msa0756290 MtrunA17_Chr2g0295791 26.267 217 147 4 80 294 166 371 5.70e-17 81.6
Msa0756290 MtrunA17_Chr2g0295791 28.395 162 107 1 136 297 181 333 7.49e-14 72.0
Msa0756290 MtrunA17_Chr3g0103361 26.148 283 187 8 44 317 20 289 7.85e-17 79.7
Msa0756290 MtrunA17_Chr3g0103361 30.220 182 106 5 157 330 9 177 2.52e-16 78.6
Msa0756290 MtrunA17_Chr8g0352821 24.793 363 214 10 12 325 109 461 3.52e-16 79.7
Msa0756290 MtrunA17_Chr8g0352821 24.409 254 181 4 40 290 222 467 9.75e-16 78.2
Msa0756290 MtrunA17_Chr2g0283891 30.000 180 111 7 159 332 99 269 4.66e-16 77.8
Msa0756290 MtrunA17_Chr3g0144511 25.000 272 166 11 46 289 110 371 5.70e-16 78.2
Msa0756290 MtrunA17_Chr3g0144511 24.380 242 148 10 79 299 60 287 3.30e-12 66.6
Msa0756290 MtrunA17_Chr2g0322171 26.515 264 148 8 40 298 7 229 1.73e-15 76.3
Msa0756290 MtrunA17_Chr4g0026671 23.662 355 201 10 46 330 16 370 1.74e-15 77.4
Msa0756290 MtrunA17_Chr4g0052291 27.197 239 137 10 80 289 174 404 2.13e-15 76.6
Msa0756290 MtrunA17_Chr7g0266251 24.151 265 130 9 46 287 19 235 2.53e-15 75.9
Msa0756290 MtrunA17_Chr7g0266251 24.522 314 152 12 1 291 41 292 2.45e-14 72.8
Msa0756290 MtrunA17_Chr7g0266251 28.649 185 106 6 160 327 9 184 1.48e-13 70.5
Msa0756290 MtrunA17_Chr4g0069701 33.793 145 94 2 57 199 78 222 2.76e-15 77.0
Msa0756290 MtrunA17_Chr7g0267961 23.973 292 135 8 43 289 181 430 3.78e-15 75.9
Msa0756290 MtrunA17_Chr8g0383711 24.107 224 158 3 79 301 13 225 4.02e-15 74.7
Msa0756290 MtrunA17_Chr3g0095501 25.484 310 196 12 1 301 289 572 7.37e-15 75.5
Msa0756290 MtrunA17_Chr3g0095501 30.345 145 88 3 160 301 263 397 5.41e-13 69.7
Msa0756290 MtrunA17_Chr2g0321211 27.358 212 118 5 46 221 16 227 7.64e-15 75.5
Msa0756290 MtrunA17_Chr2g0321211 30.872 149 77 2 160 291 59 198 5.23e-12 67.0
Msa0756290 MtrunA17_Chr2g0284241 23.897 272 186 7 43 301 50 313 8.79e-15 74.3
Msa0756290 MtrunA17_Chr1g0148791 24.335 263 141 8 51 308 630 839 1.48e-14 74.7
Msa0756290 MtrunA17_Chr4g0059031 27.236 246 153 8 57 287 419 653 2.92e-14 73.9
Msa0756290 MtrunA17_Chr4g0059031 29.697 165 104 3 160 318 95 253 1.24e-13 72.0
Msa0756290 MtrunA17_Chr4g0059031 28.313 166 114 4 164 325 444 608 1.52e-11 65.5
Msa0756290 MtrunA17_Chr3g0138311 25.769 260 137 9 51 308 629 834 5.16e-14 73.2
Msa0756290 MtrunA17_Chr3g0138311 29.878 164 102 4 168 329 622 774 2.19e-13 71.2
Msa0756290 MtrunA17_Chr3g0099061 29.032 248 142 9 91 321 221 451 6.53e-14 72.4
Msa0756290 MtrunA17_Chr3g0099061 26.009 223 150 6 114 331 167 379 6.59e-14 72.4
Msa0756290 MtrunA17_Chr4g0004241 23.256 258 185 5 75 327 6 255 1.29e-13 72.0
Msa0756290 MtrunA17_Chr2g0282401 26.496 234 149 9 80 308 508 723 1.36e-13 71.6
Msa0756290 MtrunA17_Chr2g0331961 26.471 306 190 10 5 304 40 316 1.49e-13 70.5
Msa0756290 MtrunA17_Chr7g0228191 23.221 267 154 9 71 289 56 319 2.10e-13 70.1
Msa0756290 MtrunA17_Chr4g0036951 27.160 243 125 9 80 315 158 355 5.52e-13 69.3
Msa0756290 MtrunA17_Chr2g0307941 21.986 282 161 5 46 318 65 296 9.79e-13 69.3
Msa0756290 MtrunA17_Chr2g0307941 25.500 200 131 3 138 329 34 223 1.47e-11 65.5
Msa0756290 MtrunA17_Chr7g0233651 22.837 289 136 8 46 289 168 414 1.13e-12 68.6
Msa0756290 MtrunA17_Chr2g0308501 28.814 177 106 6 89 256 64 229 1.52e-12 67.4
Msa0756290 MtrunA17_Chr4g0058091 23.381 278 195 6 58 327 245 512 1.90e-12 67.8
Msa0756290 MtrunA17_Chr5g0442391 24.231 260 169 8 43 290 308 551 2.13e-12 67.8
Msa0756290 MtrunA17_Chr5g0442391 26.437 174 114 4 160 329 257 420 2.71e-11 64.3
Msa0756290 MtrunA17_Chr8g0390861 20.747 241 175 3 57 294 883 1110 3.27e-12 67.8
Msa0756290 MtrunA17_Chr3g0116561 24.460 278 192 6 58 327 240 507 4.35e-12 67.0
Msa0756290 MtrunA17_Chr3g0111961 23.509 285 167 9 49 289 185 462 6.51e-12 66.2
Msa0756290 MtrunA17_Chr5g0395821 23.810 294 171 12 43 287 137 426 6.68e-12 66.2
Msa0756290 MtrunA17_Chr4g0035611 24.786 234 135 4 90 293 15 237 7.07e-12 66.6
Msa0756290 MtrunA17_Chr7g0237241 23.715 253 174 8 46 293 501 739 1.68e-11 65.5
Msa0756290 MtrunA17_Chr7g0237241 23.348 227 158 8 82 305 496 709 8.43e-11 63.2
Msa0756290 MtrunA17_Chr4g0062881 25.146 171 115 4 160 329 173 331 1.74e-11 64.7
Msa0756290 MtrunA17_Chr7g0237271 23.320 253 175 8 46 293 510 748 2.98e-11 64.7
Msa0756290 MtrunA17_Chr2g0292301 25.843 178 127 4 30 206 199 372 3.90e-11 63.9
Msa0756290 MtrunA17_Chr3g0098921 23.390 295 172 13 43 287 141 431 7.65e-11 62.8
Msa0756290 MtrunA17_Chr2g0294611 27.189 217 121 7 83 269 243 452 7.69e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0756290 AT5G67320.1 75.602 332 79 1 1 332 284 613 0.0 536
Msa0756290 AT5G67320.1 33.333 150 73 5 157 289 255 394 9.41e-15 75.5
Msa0756290 AT3G49660.1 28.179 291 186 9 1 288 43 313 1.95e-25 104
Msa0756290 AT3G49660.1 26.087 230 154 4 79 301 19 239 1.05e-22 97.1
Msa0756290 AT3G49660.1 23.897 272 187 7 41 301 22 284 1.07e-19 88.6
Msa0756290 AT3G49660.1 28.659 164 102 3 161 318 18 172 1.91e-15 76.3
Msa0756290 AT3G49660.1 25.121 207 126 4 1 199 132 317 2.71e-14 72.8
Msa0756290 AT2G43770.1 26.780 295 155 8 46 329 56 300 4.29e-24 101
Msa0756290 AT2G43770.1 30.857 175 110 3 159 331 45 210 4.09e-14 72.8
Msa0756290 AT5G25150.1 28.302 265 168 7 45 302 380 629 6.35e-24 102
Msa0756290 AT5G25150.1 32.367 207 129 4 125 329 417 614 2.34e-23 101
Msa0756290 AT5G25150.1 25.926 216 132 5 133 331 328 532 2.71e-12 68.2
Msa0756290 AT5G25150.2 28.302 265 168 7 45 302 380 629 7.28e-24 102
Msa0756290 AT5G25150.2 32.367 207 129 4 125 329 417 614 2.60e-23 101
Msa0756290 AT5G25150.2 25.926 216 132 5 133 331 328 532 2.53e-12 68.2
Msa0756290 AT5G25150.2 26.882 186 134 2 55 238 472 657 4.33e-11 64.3
Msa0756290 AT5G52820.1 31.579 247 145 9 46 287 244 471 4.87e-23 99.8
Msa0756290 AT5G52820.1 25.466 322 203 10 46 331 112 432 2.90e-19 88.6
Msa0756290 AT5G52820.1 23.876 356 211 9 1 318 128 461 3.44e-17 82.4
Msa0756290 AT5G52820.1 27.311 238 147 8 78 303 103 326 2.77e-12 67.8
Msa0756290 AT5G52820.1 27.184 206 143 5 99 302 82 282 5.69e-12 67.0
Msa0756290 AT4G02730.1 26.446 242 161 5 65 301 25 254 4.36e-22 95.5
Msa0756290 AT4G02730.1 32.298 161 98 3 160 318 36 187 5.35e-18 84.0
Msa0756290 AT4G02730.1 26.613 248 170 7 46 287 88 329 1.17e-16 80.1
Msa0756290 AT2G41500.1 26.230 305 208 6 4 301 213 507 1.11e-21 96.3
Msa0756290 AT2G41500.1 27.350 234 157 4 58 288 313 536 1.47e-21 95.9
Msa0756290 AT2G41500.1 27.429 175 114 4 160 332 291 454 3.50e-13 70.9
Msa0756290 AT2G41500.2 26.230 305 208 6 4 301 213 507 1.11e-21 96.3
Msa0756290 AT2G41500.2 27.350 234 157 4 58 288 313 536 1.47e-21 95.9
Msa0756290 AT2G41500.2 27.429 175 114 4 160 332 291 454 3.50e-13 70.9
Msa0756290 AT1G11160.2 28.070 228 151 4 57 281 30 247 5.25e-21 94.7
Msa0756290 AT1G11160.2 25.806 217 150 3 83 297 14 221 1.82e-20 92.8
Msa0756290 AT1G11160.2 31.214 173 108 4 160 330 8 171 2.67e-17 83.6
Msa0756290 AT1G11160.2 23.118 186 132 2 120 303 9 185 4.44e-16 79.7
Msa0756290 AT1G11160.1 28.070 228 151 4 57 281 30 247 5.76e-21 94.4
Msa0756290 AT1G11160.1 25.806 217 150 3 83 297 14 221 1.98e-20 92.8
Msa0756290 AT1G11160.1 31.214 173 108 4 160 330 8 171 2.90e-17 83.6
Msa0756290 AT1G11160.1 23.118 186 132 2 120 303 9 185 4.91e-16 79.7
Msa0756290 AT1G11160.4 28.070 228 151 4 57 281 30 247 6.40e-21 94.4
Msa0756290 AT1G11160.4 25.806 217 150 3 83 297 14 221 2.27e-20 92.8
Msa0756290 AT1G11160.4 30.636 173 109 4 160 330 8 171 3.25e-17 83.2
Msa0756290 AT1G11160.4 23.118 186 132 2 120 303 9 185 5.40e-16 79.7
Msa0756290 AT1G61210.3 28.936 235 153 5 57 288 30 253 1.23e-20 93.6
Msa0756290 AT1G61210.3 29.677 155 99 2 160 313 93 238 6.20e-18 85.5
Msa0756290 AT1G61210.3 29.480 173 111 4 160 330 8 171 1.60e-16 81.3
Msa0756290 AT1G61210.3 23.656 186 131 2 120 303 9 185 1.35e-14 75.5
Msa0756290 AT1G61210.2 28.936 235 153 5 57 288 30 253 1.92e-20 92.8
Msa0756290 AT1G61210.2 29.677 155 99 2 160 313 93 238 6.90e-18 85.5
Msa0756290 AT1G61210.2 29.480 173 111 4 160 330 8 171 1.93e-16 80.9
Msa0756290 AT1G61210.2 23.656 186 131 2 120 303 9 185 2.80e-14 74.3
Msa0756290 AT1G61210.1 28.936 235 153 5 57 288 30 253 2.14e-20 92.8
Msa0756290 AT1G61210.1 29.677 155 99 2 160 313 93 238 7.43e-18 85.1
Msa0756290 AT1G61210.1 29.480 173 111 4 160 330 8 171 2.04e-16 80.9
Msa0756290 AT1G61210.1 23.656 186 131 2 120 303 9 185 2.87e-14 74.3
Msa0756290 AT5G08390.1 27.234 235 157 5 57 288 31 254 5.97e-20 91.3
Msa0756290 AT5G08390.1 30.636 173 109 4 160 330 9 172 2.36e-16 80.5
Msa0756290 AT5G08390.1 23.656 186 131 2 120 303 10 186 2.83e-16 80.5
Msa0756290 AT5G23430.1 26.786 280 177 9 57 327 31 291 8.48e-20 90.9
Msa0756290 AT5G23430.1 27.746 173 114 3 160 330 9 172 1.94e-16 80.9
Msa0756290 AT5G23430.1 23.280 189 134 2 120 306 10 189 1.37e-15 78.2
Msa0756290 AT5G23430.3 26.786 280 177 9 57 327 31 291 8.88e-20 90.9
Msa0756290 AT5G23430.3 27.746 173 114 3 160 330 9 172 2.03e-16 80.9
Msa0756290 AT5G23430.3 23.280 189 134 2 120 306 10 189 1.40e-15 78.2
Msa0756290 AT5G23430.2 26.786 280 177 9 57 327 31 291 8.88e-20 90.9
Msa0756290 AT5G23430.2 27.746 173 114 3 160 330 9 172 2.03e-16 80.9
Msa0756290 AT5G23430.2 23.280 189 134 2 120 306 10 189 1.40e-15 78.2
Msa0756290 AT1G11160.3 27.014 211 143 3 79 288 11 211 1.12e-18 87.4
Msa0756290 AT1G11160.3 24.623 199 139 3 120 316 10 199 9.38e-18 84.7
Msa0756290 AT1G11160.3 35.965 114 71 2 218 330 17 129 6.87e-12 67.0
Msa0756290 AT1G48630.1 28.279 244 159 7 76 310 7 243 6.85e-18 83.6
Msa0756290 AT1G48630.1 25.882 255 159 8 57 296 30 269 1.32e-14 73.9
Msa0756290 AT1G18080.1 28.163 245 159 8 76 310 7 244 1.53e-17 82.4
Msa0756290 AT1G18080.1 26.724 232 147 7 74 296 53 270 5.77e-13 69.3
Msa0756290 AT4G29830.1 26.948 308 172 9 57 330 32 320 1.98e-17 82.0
Msa0756290 AT2G26060.2 26.299 308 144 10 1 286 46 292 2.28e-17 82.0
Msa0756290 AT2G26060.2 30.851 188 103 6 158 327 11 189 7.72e-14 72.0
Msa0756290 AT2G26060.2 23.846 260 133 6 52 294 36 247 2.58e-13 70.1
Msa0756290 AT2G32700.7 26.210 248 161 10 46 287 574 805 2.93e-17 83.2
Msa0756290 AT2G32700.7 26.087 253 156 10 54 295 540 772 2.79e-12 68.2
Msa0756290 AT2G32700.2 26.210 248 161 10 46 287 555 786 3.24e-17 83.2
Msa0756290 AT2G32700.2 26.087 253 156 10 54 295 521 753 3.08e-12 68.2
Msa0756290 AT2G32700.5 26.210 248 161 10 46 287 555 786 3.24e-17 83.2
Msa0756290 AT2G32700.5 26.087 253 156 10 54 295 521 753 3.08e-12 68.2
Msa0756290 AT2G32700.1 26.210 248 161 10 46 287 555 786 3.24e-17 83.2
Msa0756290 AT2G32700.1 26.087 253 156 10 54 295 521 753 3.08e-12 68.2
Msa0756290 AT2G32700.4 26.210 248 161 10 46 287 555 786 3.24e-17 83.2
Msa0756290 AT2G32700.4 26.087 253 156 10 54 295 521 753 3.08e-12 68.2
Msa0756290 AT2G32700.3 26.210 248 161 10 46 287 555 786 3.24e-17 83.2
Msa0756290 AT2G32700.3 26.087 253 156 10 54 295 521 753 3.08e-12 68.2
Msa0756290 AT2G26060.1 26.299 308 144 10 1 286 46 292 3.30e-17 81.6
Msa0756290 AT2G26060.1 30.851 188 103 6 158 327 11 189 6.98e-14 72.0
Msa0756290 AT2G26060.1 23.846 260 133 6 52 294 36 247 3.10e-13 70.1
Msa0756290 AT2G32700.6 26.210 248 161 10 46 287 553 784 3.42e-17 83.2
Msa0756290 AT2G32700.6 26.087 253 156 10 54 295 519 751 3.50e-12 67.8
Msa0756290 AT1G71840.1 25.965 285 192 7 54 329 82 356 3.49e-17 82.4
Msa0756290 AT1G71840.1 23.355 304 168 8 37 287 106 397 1.96e-15 77.0
Msa0756290 AT5G56130.1 25.795 283 188 8 44 317 21 290 6.45e-17 80.5
Msa0756290 AT5G56130.1 26.437 174 115 3 161 330 14 178 1.86e-13 70.5
Msa0756290 AT3G18130.1 29.279 222 142 6 97 310 29 243 7.72e-17 80.5
Msa0756290 AT3G18130.1 26.724 232 146 7 74 296 53 269 1.98e-14 73.6
Msa0756290 AT4G34460.2 25.275 273 163 9 46 289 48 308 1.23e-16 79.7
Msa0756290 AT4G34460.2 23.616 271 161 12 87 328 6 259 2.80e-12 67.0
Msa0756290 AT4G34460.1 25.275 273 163 9 46 289 110 370 1.29e-16 80.5
Msa0756290 AT4G34460.1 24.373 279 165 12 79 328 60 321 9.90e-15 74.7
Msa0756290 AT4G34460.4 25.275 273 163 9 46 289 105 365 1.47e-16 80.1
Msa0756290 AT4G34460.4 24.373 279 165 12 79 328 55 316 9.83e-15 74.7
Msa0756290 AT5G13480.4 24.150 294 209 5 12 301 37 320 1.73e-16 80.9
Msa0756290 AT5G13480.4 23.622 254 183 4 40 290 150 395 7.22e-13 69.7
Msa0756290 AT5G13480.3 24.150 294 209 5 12 301 37 320 1.90e-16 80.5
Msa0756290 AT5G13480.3 23.622 254 183 4 40 290 150 395 7.20e-13 69.7
Msa0756290 AT5G13480.1 24.150 294 209 5 12 301 49 332 1.91e-16 80.5
Msa0756290 AT5G13480.1 23.077 286 209 4 8 290 130 407 6.90e-13 69.7
Msa0756290 AT5G64730.1 24.664 223 156 3 80 301 14 225 2.46e-16 78.6
Msa0756290 AT5G13480.2 24.521 261 185 3 44 301 92 343 2.81e-16 80.1
Msa0756290 AT5G13480.2 23.077 286 209 4 8 290 141 418 6.95e-13 69.7
Msa0756290 AT4G32551.2 26.119 268 140 9 46 308 692 906 3.09e-16 80.1
Msa0756290 AT4G32551.2 31.707 164 99 4 168 329 690 842 2.38e-14 74.7
Msa0756290 AT4G32551.1 26.119 268 140 9 46 308 654 868 3.66e-16 80.1
Msa0756290 AT4G32551.1 31.707 164 99 4 168 329 652 804 2.25e-14 74.7
Msa0756290 AT4G15900.1 22.000 300 168 6 80 325 172 459 6.16e-16 79.0
Msa0756290 AT1G73720.1 27.823 248 144 8 91 321 220 449 8.36e-16 78.6
Msa0756290 AT1G73720.1 28.743 167 117 2 164 329 210 375 7.08e-14 72.8
Msa0756290 AT3G16650.1 26.147 218 147 5 79 294 165 370 9.02e-16 78.2
Msa0756290 AT1G15440.1 24.211 285 171 8 45 299 391 660 1.60e-15 78.2
Msa0756290 AT1G15440.2 24.211 285 171 8 45 299 351 620 1.96e-15 77.8
Msa0756290 AT3G44530.1 24.646 353 194 12 46 330 16 364 2.58e-15 77.4
Msa0756290 AT3G44530.2 24.646 353 194 12 46 330 16 364 2.85e-15 77.4
Msa0756290 AT3G18140.1 23.656 279 188 7 43 308 35 301 2.91e-15 75.5
Msa0756290 AT2G46290.1 27.473 273 136 12 40 298 34 258 5.20e-15 75.5
Msa0756290 AT4G34460.3 24.373 279 165 12 79 328 60 321 1.04e-14 74.3
Msa0756290 AT4G34460.3 25.000 232 137 8 46 252 110 329 8.12e-11 62.8
Msa0756290 AT4G32990.2 26.230 244 132 11 80 304 16 230 2.32e-14 72.8
Msa0756290 AT4G32990.2 24.096 249 120 9 61 286 66 268 8.53e-12 65.1
Msa0756290 AT2G46280.3 26.054 261 139 8 40 290 7 223 2.77e-14 72.0
Msa0756290 AT3G21540.1 27.197 239 150 6 56 291 77 294 2.95e-14 74.3
Msa0756290 AT4G32990.1 26.230 244 132 11 80 304 16 230 3.22e-14 72.8
Msa0756290 AT4G32990.1 26.838 272 143 13 61 289 66 324 8.08e-12 65.9
Msa0756290 AT2G30050.1 28.777 278 163 11 83 327 10 285 3.60e-14 72.4
Msa0756290 AT2G22040.1 24.153 236 159 5 83 308 83 308 4.67e-14 72.4
Msa0756290 AT1G49040.1 22.822 241 170 3 57 294 869 1096 5.91e-14 73.6
Msa0756290 AT2G46280.2 26.054 261 139 8 40 290 7 223 6.41e-14 72.0
Msa0756290 AT2G46280.1 26.054 261 139 8 40 290 7 223 6.41e-14 72.0
Msa0756290 AT5G16750.1 25.506 247 158 7 56 287 417 652 6.88e-14 73.2
Msa0756290 AT2G05720.1 31.818 132 76 3 175 301 134 256 7.52e-14 71.2
Msa0756290 AT2G05720.1 25.746 268 163 7 7 266 24 263 3.59e-13 69.3
Msa0756290 AT4G35050.1 25.926 243 130 8 80 315 165 364 8.20e-14 72.4
Msa0756290 AT1G29260.1 28.889 180 113 7 159 332 98 268 1.26e-13 70.9
Msa0756290 AT5G13840.1 22.759 290 175 8 43 289 174 457 3.43e-13 70.5
Msa0756290 AT5G13840.2 22.759 290 175 8 43 289 174 457 3.43e-13 70.5
Msa0756290 AT4G33260.1 23.053 321 190 11 23 289 104 421 5.39e-13 69.7
Msa0756290 AT4G33270.1 22.981 322 191 11 22 289 113 431 7.94e-13 69.3
Msa0756290 AT1G18830.2 29.126 206 121 8 58 248 131 326 4.72e-12 67.4
Msa0756290 AT1G18830.3 29.126 206 121 8 58 248 131 326 4.72e-12 67.4
Msa0756290 AT1G18830.1 29.126 206 121 8 58 248 131 326 5.42e-12 67.4
Msa0756290 AT4G33260.2 22.956 318 188 11 22 285 103 417 1.49e-11 65.5
Msa0756290 AT1G79990.1 23.810 231 164 4 75 301 6 228 1.74e-11 65.9
Msa0756290 AT3G01340.1 27.698 278 166 11 83 327 10 285 1.89e-11 64.3
Msa0756290 AT3G01340.2 27.698 278 166 11 83 327 10 285 1.89e-11 64.3
Msa0756290 AT4G22910.1 24.409 254 174 10 43 289 217 459 1.91e-11 65.1
Msa0756290 AT1G79990.2 23.810 231 164 4 75 301 6 228 2.04e-11 65.5
Msa0756290 AT5G64630.1 24.601 313 168 10 46 294 67 375 2.73e-11 64.7
Msa0756290 AT2G16780.1 26.047 215 112 7 80 290 164 335 2.81e-11 64.7
Msa0756290 AT5G27945.1 22.837 289 136 7 46 289 155 401 3.23e-11 64.3
Msa0756290 AT5G27570.1 22.449 294 140 8 42 289 172 423 3.77e-11 64.3
Msa0756290 AT5G49430.2 28.070 171 107 6 80 241 241 404 4.34e-11 64.7
Msa0756290 AT5G49430.1 28.070 171 107 6 80 241 241 404 4.34e-11 64.7
Msa0756290 AT2G47410.6 26.484 219 132 5 80 269 50 268 4.93e-11 64.3
Msa0756290 AT2G47410.3 26.484 219 132 5 80 269 50 268 4.93e-11 64.3
Msa0756290 AT5G64630.2 24.281 313 169 10 46 294 67 375 4.98e-11 63.9
Msa0756290 AT2G47410.5 26.484 219 132 5 80 269 232 450 6.25e-11 64.3
Msa0756290 AT5G43920.1 26.804 194 119 9 150 331 205 387 7.44e-11 63.5
Msa0756290 AT1G52360.3 20.548 292 193 5 75 327 6 297 7.49e-11 63.9
Msa0756290 AT1G52360.4 20.548 292 193 5 75 327 6 297 7.57e-11 63.9
Msa0756290 AT1G52360.1 20.548 292 193 5 75 327 6 297 7.57e-11 63.9
Msa0756290 AT1G52360.2 20.548 292 193 5 75 327 50 341 8.31e-11 63.5
Msa0756290 AT2G32950.2 28.671 143 100 2 54 194 362 504 9.47e-11 63.2
Msa0756290 AT3G63460.2 27.602 221 134 9 46 248 125 337 9.99e-11 63.5

Find 93 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAAGGACCATATATTTA+TGG 0.160905 5_2:+10469596 None:intergenic
AATGGTTAACACTTTAAAAT+AGG 0.164118 5_2:+10469345 None:intergenic
GCCAACACCAATTTCTTATT+AGG 0.182828 5_2:+10471339 None:intergenic
GGGATTCAACAGCTCGTATT+TGG 0.216439 5_2:-10474175 Msa0756290:CDS
ATGATGGTCATGCACGAATT+TGG 0.234853 5_2:-10472816 Msa0756290:CDS
ATATTGATAGAACTGTATTT+TGG 0.239016 5_2:-10469381 Msa0756290:three_prime_UTR
AAAGGAGATTATATTCTTAC+TGG 0.246261 5_2:-10472512 Msa0756290:CDS
TAACAATACTGTTTGCGTTT+TGG 0.266463 5_2:-10469481 Msa0756290:CDS
ATGATTCATGTTTGCAAGAT+TGG 0.271788 5_2:-10472233 Msa0756290:CDS
TTCCGCATCCCATAGCTTTA+CGG 0.289923 5_2:+10470003 None:intergenic
CCAACACCAATTTCTTATTA+GGG 0.296590 5_2:+10471340 None:intergenic
ATTCCACTTCAAAGAAAGTA+TGG 0.303584 5_2:+10472538 None:intergenic
CATATATTTATGGATTTGTC+AGG 0.345229 5_2:+10469606 None:intergenic
AAATAACCCTAATAAGAAAT+TGG 0.348123 5_2:-10471346 Msa0756290:CDS
GTGAAGTTAATTGTATCAAA+TGG 0.359842 5_2:-10471767 Msa0756290:CDS
GGATCCCACAGGTTCATTAC+TGG 0.376344 5_2:-10471745 Msa0756290:CDS
CTGACAAATCCATAAATATA+TGG 0.383476 5_2:-10469605 Msa0756290:CDS
AATGATCTTGCCATCATTCA+AGG 0.388091 5_2:+10469581 None:intergenic
CACAGTCGAAGGGTCGTTCT+TGG 0.388341 5_2:+10474121 None:intergenic
ATGGTTAACACTTTAAAATA+GGG 0.391671 5_2:+10469346 None:intergenic
GTCCAACGCTTGACGTTGAT+TGG 0.397898 5_2:-10472295 Msa0756290:CDS
TTCTAATTTCTTCTCGCATC+CGG 0.403598 5_2:+10469186 None:intergenic
GCACGAATTTGGACCACTAA+TGG 0.421139 5_2:-10472805 Msa0756290:intron
AAGCTATGGGATGCGGAACT+CGG 0.422502 5_2:-10469998 Msa0756290:CDS
ATCTAATTTACGTGTCCGTT+CGG 0.427685 5_2:+10474145 None:intergenic
CATAATCATTAGTACCTAGT+TGG 0.432705 5_2:-10469291 Msa0756290:three_prime_UTR
GGGATGTTCATGCAGAGAAA+TGG 0.438009 5_2:-10472463 Msa0756290:CDS
AAGATGTCACTACACTTGAT+TGG 0.446888 5_2:-10474049 Msa0756290:CDS
TGAGAAGAGCCACCTTACTT+TGG 0.449886 5_2:-10469439 Msa0756290:three_prime_UTR
AAAGTAAGGTGGCTCTTCTC+AGG 0.459176 5_2:+10469441 None:intergenic
TTGCATCCTCGGTCTGCTGC+CGG 0.480759 5_2:-10469205 Msa0756290:three_prime_UTR
ACTATCAGATGGAGCCCTAC+TGG 0.480899 5_2:-10471378 Msa0756290:CDS
AAGAAAGGGCCTACCATTAG+TGG 0.482706 5_2:+10472792 None:intergenic
TGAAGTTAATTGTATCAAAT+GGG 0.484187 5_2:-10471766 Msa0756290:CDS
ATAATCATTAGTACCTAGTT+GGG 0.487608 5_2:-10469290 Msa0756290:three_prime_UTR
TCTTTGAAGTGGAATAAGAA+AGG 0.489711 5_2:-10472530 Msa0756290:CDS
TTGACTCTACCGTAAAGCTA+TGG 0.491135 5_2:-10470012 Msa0756290:CDS
GTGATGAGACTGCAATTGTA+TGG 0.491361 5_2:-10472484 Msa0756290:CDS
ATACAGTTCTATCAATATCA+TGG 0.492139 5_2:+10469386 None:intergenic
AGATGGAGCCCTACTGGTCC+TGG 0.492139 5_2:-10471372 Msa0756290:CDS
AATATATGGTCCTTGAATGA+TGG 0.499260 5_2:-10469591 Msa0756290:CDS
CTGGCTAAATACTCACCATT+GGG 0.500371 5_2:+10469636 None:intergenic
TTGAGCAACTAGCCAAAGTA+AGG 0.500908 5_2:+10469427 None:intergenic
CTTGCAACCGGTGCTTATGA+TGG 0.502013 5_2:-10472832 Msa0756290:CDS
TTACAATCATATTGCATCCT+CGG 0.502086 5_2:-10469216 Msa0756290:three_prime_UTR
GGATTTGTCAGGGGACCCAC+TGG 0.507070 5_2:+10469617 None:intergenic
GAGGGGACACTACTTGCAAC+CGG 0.507853 5_2:-10472844 Msa0756290:CDS
GAGCCATACTTTCTTTGAAG+TGG 0.513096 5_2:-10472541 Msa0756290:CDS
CCCTAATAAGAAATTGGTGT+TGG 0.516897 5_2:-10471340 Msa0756290:CDS
ACTGGCTAAATACTCACCAT+TGG 0.517505 5_2:+10469635 None:intergenic
TCTGTTGCATTTAGTCCCAA+TGG 0.520600 5_2:-10469651 Msa0756290:CDS
AATCTTGCAAACATGAATCA+TGG 0.522831 5_2:+10472235 None:intergenic
AAATTAATTTATAGCTTGAG+TGG 0.527976 5_2:-10469974 Msa0756290:CDS
ATAAGAAATTGGTGTTGGCT+AGG 0.535443 5_2:-10471335 Msa0756290:intron
AGCTATGGGATGCGGAACTC+GGG 0.538087 5_2:-10469997 Msa0756290:CDS
TTATTAGGGTTATTTGTACC+AGG 0.541681 5_2:+10471354 None:intergenic
ATTAAAACATACAATGGCAA+TGG 0.544854 5_2:-10469561 Msa0756290:CDS
CGCCAATCAACGTCAAGCGT+TGG 0.551111 5_2:+10472293 None:intergenic
TGACTCTACCGTAAAGCTAT+GGG 0.556766 5_2:-10470011 Msa0756290:CDS
AAAAGAATACACTCCCAACT+AGG 0.560321 5_2:+10469277 None:intergenic
ATATATTTATGGATTTGTCA+GGG 0.564428 5_2:+10469607 None:intergenic
TACCGTAAAGCTATGGGATG+CGG 0.571449 5_2:-10470005 Msa0756290:CDS
TTATTTGTACCAGGACCAGT+AGG 0.572374 5_2:+10471363 None:intergenic
AGGAGGTATATACTATCAGA+TGG 0.579009 5_2:-10471389 Msa0756290:CDS
TGCAACACCAACACAGTCGA+AGG 0.580347 5_2:+10474110 None:intergenic
GAGGTCTGTTGGAACAAGGA+GGG 0.582876 5_2:-10469528 Msa0756290:CDS
AAGATCATTAAAACATACAA+TGG 0.590693 5_2:-10469567 Msa0756290:CDS
GTTGGTGTTGCAACACATCA+AGG 0.591113 5_2:-10474099 Msa0756290:CDS
TGCATGACCATCATAAGCAC+CGG 0.593002 5_2:+10472825 None:intergenic
TATATTTATGGATTTGTCAG+GGG 0.597188 5_2:+10469608 None:intergenic
TATGATTGTAATTATACAGA+CGG 0.597219 5_2:+10469228 None:intergenic
AAAACATACAATGGCAATGG+AGG 0.598170 5_2:-10469558 Msa0756290:CDS
AGAGTTACAACTTACAACAA+TGG 0.603862 5_2:+10469327 None:intergenic
AACATGAATCATGGCGTCAG+TGG 0.609369 5_2:+10472244 None:intergenic
AGTGTTATCGTCTGAACATG+AGG 0.617032 5_2:+10471722 None:intergenic
TCGCATCCGGCAGCAGACCG+AGG 0.617101 5_2:+10469199 None:intergenic
TGATGAGACTGCAATTGTAT+GGG 0.619862 5_2:-10472483 Msa0756290:CDS
GAGTACATTAAGCAAGCACA+AGG 0.622679 5_2:-10472564 Msa0756290:CDS
TTTATAGCTTGAGTGGACAC+AGG 0.623387 5_2:-10469967 Msa0756290:intron
TGAGGCCAGTAATGAACCTG+TGG 0.623612 5_2:+10471740 None:intergenic
GAACGACCCTTCGACTGTGT+TGG 0.624305 5_2:-10474117 Msa0756290:CDS
TGTATCAAATGGGATCCCAC+AGG 0.627567 5_2:-10471756 Msa0756290:CDS
TATTTGTACCAGGACCAGTA+GGG 0.628245 5_2:+10471364 None:intergenic
AATGGTGAGTATTTAGCCAG+TGG 0.632034 5_2:-10469633 Msa0756290:CDS
ATGGTGAGTATTTAGCCAGT+GGG 0.634149 5_2:-10469632 Msa0756290:CDS
TGAGGTCTGTTGGAACAAGG+AGG 0.635956 5_2:-10469529 Msa0756290:CDS
TTCAGACGATAACACTGCAA+AGG 0.639322 5_2:-10471715 Msa0756290:intron
AGCAACTAGCCAAAGTAAGG+TGG 0.639749 5_2:+10469430 None:intergenic
GCAACACCAACACAGTCGAA+GGG 0.676096 5_2:+10474111 None:intergenic
GAGGCCAGTAATGAACCTGT+GGG 0.680992 5_2:+10471741 None:intergenic
TTGGTGTTGCAACACATCAA+GGG 0.692742 5_2:-10474098 Msa0756290:CDS
AGTACATTAAGCAAGCACAA+GGG 0.713899 5_2:-10472563 Msa0756290:CDS
GTATTTGGACAATAGCCGAA+CGG 0.724803 5_2:-10474160 Msa0756290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTAATTT+AGG - chr5_2:10470386-10470405 Msa0756290:intron 0.0%
!!! TTTTTTTTTTTTTTAATTTA+GGG - chr5_2:10470387-10470406 Msa0756290:intron 0.0%
!!! TATTTTTATTTTTAATATTT+GGG - chr5_2:10471026-10471045 Msa0756290:intron 0.0%
!!! TTTTATTTATTTTTTATTTT+AGG - chr5_2:10472705-10472724 Msa0756290:intron 0.0%
!! AAAGAAAAAAAGATAAATAT+GGG + chr5_2:10470103-10470122 None:intergenic 10.0%
!!! TATTTTAAAAATCAGTTTTT+TGG + chr5_2:10470349-10470368 None:intergenic 10.0%
!!! AAAAAACTGATTTTTAAAAT+AGG - chr5_2:10470348-10470367 Msa0756290:intron 10.0%
!!! AAAAACTGATTTTTAAAATA+GGG - chr5_2:10470349-10470368 Msa0756290:intron 10.0%
!!! AAAAAAAAAAATTGAAGTTT+TGG + chr5_2:10470378-10470397 None:intergenic 10.0%
!! TGAAAAATAAAAAAACTAGA+CGG + chr5_2:10469393-10469412 None:intergenic 15.0%
!! TAAAATCAATAAAATATGTC+AGG - chr5_2:10469530-10469549 Msa0756290:CDS 15.0%
!! TAAGCCTATATTTAATTATA+TGG + chr5_2:10470006-10470025 None:intergenic 15.0%
!! GAAAGAAAAAAAGATAAATA+TGG + chr5_2:10470104-10470123 None:intergenic 15.0%
!! ACTAAGATTTATCAAAATAA+AGG + chr5_2:10470615-10470634 None:intergenic 15.0%
!!! ATATTGTTGATTTTTTAAGT+TGG - chr5_2:10470676-10470695 Msa0756290:intron 15.0%
!! TCTATAAAATAATTCTTTGA+TGG + chr5_2:10471701-10471720 None:intergenic 15.0%
!!! ATAAGTATATTCATGATTTT+AGG - chr5_2:10471831-10471850 Msa0756290:intron 15.0%
!!! TAAGTATATTCATGATTTTA+GGG - chr5_2:10471832-10471851 Msa0756290:intron 15.0%
!!! TAAATAATGTTTTTTTTCGT+AGG - chr5_2:10471945-10471964 Msa0756290:intron 15.0%
!!! AAAATTGTTTAGTTTGATTA+TGG - chr5_2:10472636-10472655 Msa0756290:intron 15.0%
!!! AAATTTGAAGGATTTTTTTT+TGG + chr5_2:10473066-10473085 None:intergenic 15.0%
!! TTTATAGTATGTTATATCAT+TGG - chr5_2:10473426-10473445 Msa0756290:intron 15.0%
!!! TTTATCTTTACTCTTTTCAT+TGG + chr5_2:10469287-10469306 None:intergenic 20.0%
!! GAAAAATAAAAAAACTAGAC+GGG + chr5_2:10469392-10469411 None:intergenic 20.0%
!!! ACTTTTGATTCAAACATTTT+AGG - chr5_2:10469587-10469606 Msa0756290:CDS 20.0%
!! TTTCTCCATTGATATTTATT+TGG - chr5_2:10469634-10469653 Msa0756290:CDS 20.0%
!! TGCACCATATAATTAAATAT+AGG - chr5_2:10469999-10470018 Msa0756290:CDS 20.0%
!!! ACGTCTTTTTTATGAAAATA+GGG + chr5_2:10470045-10470064 None:intergenic 20.0%
!!! AACGTCTTTTTTATGAAAAT+AGG + chr5_2:10470046-10470065 None:intergenic 20.0%
!!! TTTTCATAAAAAAGACGTTT+TGG - chr5_2:10470047-10470066 Msa0756290:intron 20.0%
!!! TATCTTTTTTTCTTTCTTTC+TGG - chr5_2:10470108-10470127 Msa0756290:intron 20.0%
!!! TTAAGTTTTAAATGCACTTT+CGG + chr5_2:10470415-10470434 None:intergenic 20.0%
!! AAAATAGAAGTTCATAAACA+TGG + chr5_2:10471012-10471031 None:intergenic 20.0%
!!! TTAATATTTGGGCTTTTTTT+AGG - chr5_2:10471037-10471056 Msa0756290:intron 20.0%
!! TGAAGTTAATTGTATCAAAT+GGG - chr5_2:10471588-10471607 Msa0756290:intron 20.0%
!! AGTTAATTTCACAAATATTC+TGG + chr5_2:10471753-10471772 None:intergenic 20.0%
!! AAATAACCCTAATAAGAAAT+TGG - chr5_2:10472008-10472027 Msa0756290:intron 20.0%
!! AATTAAAATATAGTGCTCTA+AGG - chr5_2:10472186-10472205 Msa0756290:intron 20.0%
!! ATTAAAATATAGTGCTCTAA+GGG - chr5_2:10472187-10472206 Msa0756290:intron 20.0%
!! ACTGTAAAATTAGAATTTGT+GGG - chr5_2:10472364-10472383 Msa0756290:intron 20.0%
!!! ATTTTACATGAAAAACTACA+CGG + chr5_2:10472621-10472640 None:intergenic 20.0%
!! TAAAAAACAAGCATAAATGA+AGG + chr5_2:10472690-10472709 None:intergenic 20.0%
!!! GTAGAATTTGATATTTTGAA+AGG + chr5_2:10472912-10472931 None:intergenic 20.0%
!!! ATAAGAATTTGAAGAGTTTT+AGG - chr5_2:10473168-10473187 Msa0756290:intron 20.0%
!! AAATTAATTTATAGCTTGAG+TGG - chr5_2:10473380-10473399 Msa0756290:intron 20.0%
!! ATATATTTATGGATTTGTCA+GGG + chr5_2:10473750-10473769 None:intergenic 20.0%
!! AAGATCATTAAAACATACAA+TGG - chr5_2:10473787-10473806 Msa0756290:intron 20.0%
!!! ATATTGATAGAACTGTATTT+TGG - chr5_2:10473973-10473992 Msa0756290:intron 20.0%
!!! ATGGTTAACACTTTAAAATA+GGG + chr5_2:10474011-10474030 None:intergenic 20.0%
!!! AATGGTTAACACTTTAAAAT+AGG + chr5_2:10474012-10474031 None:intergenic 20.0%
!!! TTGTAACTCTTGTAATTTTA+TGG - chr5_2:10474040-10474059 Msa0756290:intron 20.0%
!! TATGATTGTAATTATACAGA+CGG + chr5_2:10474129-10474148 None:intergenic 20.0%
!! GTATAAGGATAATTTTGTGT+AGG - chr5_2:10469482-10469501 Msa0756290:CDS 25.0%
! AATGTTTGAATCAAAAGTTC+AGG + chr5_2:10469585-10469604 None:intergenic 25.0%
! CAACTCCAAATAAATATCAA+TGG + chr5_2:10469642-10469661 None:intergenic 25.0%
!!! GTCTTTTTTATGAAAATAGG+GGG + chr5_2:10470043-10470062 None:intergenic 25.0%
!!! CGTCTTTTTTATGAAAATAG+GGG + chr5_2:10470044-10470063 None:intergenic 25.0%
!!! AAAAACCGACTTTTAAAACA+GGG + chr5_2:10470076-10470095 None:intergenic 25.0%
!!! AAAAAACCGACTTTTAAAAC+AGG + chr5_2:10470077-10470096 None:intergenic 25.0%
! AAATGACCCTAAAAAGAAAT+GGG + chr5_2:10470144-10470163 None:intergenic 25.0%
! AAAATGACCCTAAAAAGAAA+TGG + chr5_2:10470145-10470164 None:intergenic 25.0%
! TCGTACGTAATTATATCTTA+TGG - chr5_2:10470452-10470471 Msa0756290:intron 25.0%
! AAAGGAGATTATATTCTTAC+TGG - chr5_2:10470842-10470861 Msa0756290:intron 25.0%
!!! CAACAATTTGCTTTTCATAA+AGG - chr5_2:10470917-10470936 Msa0756290:intron 25.0%
!! CTCCCAATAAAAACTTTTAT+CGG - chr5_2:10471151-10471170 Msa0756290:intron 25.0%
!! TCCCAATAAAAACTTTTATC+GGG - chr5_2:10471152-10471171 Msa0756290:intron 25.0%
! TGAGTTAACTACTCAAATTT+GGG - chr5_2:10471303-10471322 Msa0756290:intron 25.0%
! GTCAGATACATTAGAAATTT+GGG + chr5_2:10471361-10471380 None:intergenic 25.0%
! AGTCAGATACATTAGAAATT+TGG + chr5_2:10471362-10471381 None:intergenic 25.0%
! TTAGCATTTATTACATGCTT+TGG - chr5_2:10471442-10471461 Msa0756290:intron 25.0%
! GTGAAGTTAATTGTATCAAA+TGG - chr5_2:10471587-10471606 Msa0756290:intron 25.0%
! ATCGAAAAAACATGCTATTA+TGG + chr5_2:10471672-10471691 None:intergenic 25.0%
!! TATTTCTCGTTTTGTAGATA+TGG - chr5_2:10471795-10471814 Msa0756290:intron 25.0%
! ACTGAAAATTATTCCCTAAT+TGG + chr5_2:10471872-10471891 None:intergenic 25.0%
!!! ATAATGTTTTTTTTCGTAGG+AGG - chr5_2:10471948-10471967 Msa0756290:intron 25.0%
! CACTGTAAAATTAGAATTTG+TGG - chr5_2:10472363-10472382 Msa0756290:intron 25.0%
! TGTTCATAATTTCTTCTATG+GGG + chr5_2:10472424-10472443 None:intergenic 25.0%
! GTGTTCATAATTTCTTCTAT+GGG + chr5_2:10472425-10472444 None:intergenic 25.0%
! AGTGTTCATAATTTCTTCTA+TGG + chr5_2:10472426-10472445 None:intergenic 25.0%
! TGACAGCTTAAAAACATTTA+GGG + chr5_2:10472466-10472485 None:intergenic 25.0%
! TTGACAGCTTAAAAACATTT+AGG + chr5_2:10472467-10472486 None:intergenic 25.0%
! CTATTGTATTTGTAGTTGTT+GGG + chr5_2:10472503-10472522 None:intergenic 25.0%
! CAAGGTATAAAACAAATTAG+TGG + chr5_2:10472877-10472896 None:intergenic 25.0%
!!! TTTGAAGGATTTTTTTTTGG+TGG + chr5_2:10473063-10473082 None:intergenic 25.0%
! ACTAAGAGATAAGAAATTCA+GGG + chr5_2:10473090-10473109 None:intergenic 25.0%
! AACTAAGAGATAAGAAATTC+AGG + chr5_2:10473091-10473110 None:intergenic 25.0%
! AAAGAAAACAATTATCTGTC+TGG + chr5_2:10473284-10473303 None:intergenic 25.0%
! ATATCATTGGCAAGAATATA+TGG - chr5_2:10473439-10473458 Msa0756290:intron 25.0%
!!! AACTTCTATTCTAGTTTATC+TGG - chr5_2:10473564-10473583 Msa0756290:intron 25.0%
!! TTTAATGTAGCCAATTCTTT+TGG - chr5_2:10473640-10473659 Msa0756290:intron 25.0%
! TATATTTATGGATTTGTCAG+GGG + chr5_2:10473749-10473768 None:intergenic 25.0%
! CATATATTTATGGATTTGTC+AGG + chr5_2:10473751-10473770 None:intergenic 25.0%
! CTGACAAATCCATAAATATA+TGG - chr5_2:10473749-10473768 Msa0756290:intron 25.0%
! ATTCAAGGACCATATATTTA+TGG + chr5_2:10473761-10473780 None:intergenic 25.0%
! ATTAAAACATACAATGGCAA+TGG - chr5_2:10473793-10473812 Msa0756290:intron 25.0%
! AACAGTATTGTTAGAAAAAC+AGG + chr5_2:10473866-10473885 None:intergenic 25.0%
! ATACAGTTCTATCAATATCA+TGG + chr5_2:10473971-10473990 None:intergenic 25.0%
! ATAATCATTAGTACCTAGTT+GGG - chr5_2:10474064-10474083 Msa0756290:CDS 25.0%
AGGTGAGAAAAAGATACAAA+TGG + chr5_2:10469419-10469438 None:intergenic 30.0%
! TCTTGAGCAGAATAATTTTG+TGG - chr5_2:10469449-10469468 Msa0756290:exon 30.0%
TGTGGAAAAAGAAACGTATA+AGG - chr5_2:10469467-10469486 Msa0756290:CDS 30.0%
!!! GTGTAGGTTTTGAAAATAGA+AGG - chr5_2:10469498-10469517 Msa0756290:CDS 30.0%
!!! AGGTTTTGAAAATAGAAGGA+TGG - chr5_2:10469502-10469521 Msa0756290:CDS 30.0%
GGAGAATATGGAAAAATTTG+GGG + chr5_2:10469793-10469812 None:intergenic 30.0%
GGGAGAATATGGAAAAATTT+GGG + chr5_2:10469794-10469813 None:intergenic 30.0%
AGGGAGAATATGGAAAAATT+TGG + chr5_2:10469795-10469814 None:intergenic 30.0%
! TATAGGCTTAAATGCACTTT+TGG - chr5_2:10470016-10470035 Msa0756290:CDS 30.0%
AATGACCCTAAAAAGAAATG+GGG + chr5_2:10470143-10470162 None:intergenic 30.0%
!!! AGGGTCATTTTTTTATGATG+CGG - chr5_2:10470154-10470173 Msa0756290:intron 30.0%
ATGTCACGTCATAAATGAAT+AGG + chr5_2:10470180-10470199 None:intergenic 30.0%
TATTCAGTGAGGCTTAATAA+GGG + chr5_2:10470203-10470222 None:intergenic 30.0%
ATATTCAGTGAGGCTTAATA+AGG + chr5_2:10470204-10470223 None:intergenic 30.0%
!!! TTGGGTCATTTTTTATGATG+TGG + chr5_2:10470280-10470299 None:intergenic 30.0%
AGAAGGAAAGATAGAAGAAA+GGG + chr5_2:10470579-10470598 None:intergenic 30.0%
AAGAAGGAAAGATAGAAGAA+AGG + chr5_2:10470580-10470599 None:intergenic 30.0%
!!! CCTTATTTTGATCGTGTATT+CGG - chr5_2:10470745-10470764 Msa0756290:intron 30.0%
!!! CTTATTTTGATCGTGTATTC+GGG - chr5_2:10470746-10470765 Msa0756290:intron 30.0%
!!! TTATTTTGATCGTGTATTCG+GGG - chr5_2:10470747-10470766 Msa0756290:intron 30.0%
ATTCCACTTCAAAGAAAGTA+TGG + chr5_2:10470819-10470838 None:intergenic 30.0%
!! TCTTTGAAGTGGAATAAGAA+AGG - chr5_2:10470824-10470843 Msa0756290:intron 30.0%
! AAACTCTAAAAGAGAACTCT+TGG - chr5_2:10470978-10470997 Msa0756290:intron 30.0%
AATCTTGCAAACATGAATCA+TGG + chr5_2:10471122-10471141 None:intergenic 30.0%
ATGATTCATGTTTGCAAGAT+TGG - chr5_2:10471121-10471140 Msa0756290:intron 30.0%
! CGATAAAAGTTTTTATTGGG+AGG + chr5_2:10471153-10471172 None:intergenic 30.0%
! GCCCGATAAAAGTTTTTATT+GGG + chr5_2:10471156-10471175 None:intergenic 30.0%
! TGCCCGATAAAAGTTTTTAT+TGG + chr5_2:10471157-10471176 None:intergenic 30.0%
AAGCATATTCAAAACAAGGT+AGG + chr5_2:10471193-10471212 None:intergenic 30.0%
TGCAAAGCATATTCAAAACA+AGG + chr5_2:10471197-10471216 None:intergenic 30.0%
ACTGTATAATCAATGCAGTA+GGG + chr5_2:10471268-10471287 None:intergenic 30.0%
TACTGTATAATCAATGCAGT+AGG + chr5_2:10471269-10471288 None:intergenic 30.0%
CTGAGTTAACTACTCAAATT+TGG - chr5_2:10471302-10471321 Msa0756290:intron 30.0%
GAGTTAACTACTCAAATTTG+GGG - chr5_2:10471304-10471323 Msa0756290:intron 30.0%
!! ATATAGAAAGCATCATCACA+AGG + chr5_2:10471334-10471353 None:intergenic 30.0%
TTCTAATGTATCTGACTACT+TGG - chr5_2:10471365-10471384 Msa0756290:CDS 30.0%
TCTAATGTATCTGACTACTT+GGG - chr5_2:10471366-10471385 Msa0756290:CDS 30.0%
! ATTCCAGTTAACTAGCTTAT+TGG - chr5_2:10471473-10471492 Msa0756290:intron 30.0%
! TTTTAAACTATGCAGCTTGT+TGG - chr5_2:10471916-10471935 Msa0756290:intron 30.0%
! TTTAAACTATGCAGCTTGTT+GGG - chr5_2:10471917-10471936 Msa0756290:intron 30.0%
TTATTAGGGTTATTTGTACC+AGG + chr5_2:10472003-10472022 None:intergenic 30.0%
CCAACACCAATTTCTTATTA+GGG + chr5_2:10472017-10472036 None:intergenic 30.0%
! TTTGAAGCATGCTTATTGAA+CGG + chr5_2:10472243-10472262 None:intergenic 30.0%
AAATAGTTTCTCAAAGTGTG+CGG + chr5_2:10472323-10472342 None:intergenic 30.0%
ACAGCTTAAAAACATTTAGG+GGG + chr5_2:10472464-10472483 None:intergenic 30.0%
GACAGCTTAAAAACATTTAG+GGG + chr5_2:10472465-10472484 None:intergenic 30.0%
GCTATTGTATTTGTAGTTGT+TGG + chr5_2:10472504-10472523 None:intergenic 30.0%
TACAGCATGTAATTGATTGT+TGG + chr5_2:10472564-10472583 None:intergenic 30.0%
TACTAGGTAATGTGTGATAT+TGG - chr5_2:10472750-10472769 Msa0756290:intron 30.0%
ACTAATACTTTGAGCTGATT+TGG - chr5_2:10472809-10472828 Msa0756290:CDS 30.0%
! ATTTTGTAGAATGTGAAGAG+GGG + chr5_2:10472953-10472972 None:intergenic 30.0%
! GATTTTGTAGAATGTGAAGA+GGG + chr5_2:10472954-10472973 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr5_2:10473015-10473034 Msa0756290:intron 30.0%
GAAATTCAGGGAAAATTTGA+AGG + chr5_2:10473078-10473097 None:intergenic 30.0%
!! TCTATTCTAGTTTATCTGGT+TGG - chr5_2:10473568-10473587 Msa0756290:intron 30.0%
! TGTTTTCTTGACAACATTTC+AGG - chr5_2:10473595-10473614 Msa0756290:intron 30.0%
CAAGTCAAAACCAAAAGAAT+TGG + chr5_2:10473653-10473672 None:intergenic 30.0%
AATATATGGTCCTTGAATGA+TGG - chr5_2:10473763-10473782 Msa0756290:intron 30.0%
! TAACAATACTGTTTGCGTTT+TGG - chr5_2:10473873-10473892 Msa0756290:intron 30.0%
AGAGTTACAACTTACAACAA+TGG + chr5_2:10474030-10474049 None:intergenic 30.0%
CATAATCATTAGTACCTAGT+TGG - chr5_2:10474063-10474082 Msa0756290:CDS 30.0%
TTACAATCATATTGCATCCT+CGG - chr5_2:10474138-10474157 Msa0756290:CDS 30.0%
ATCTAATTTACGTGTCCGTT+CGG + chr5_2:10469212-10469231 None:intergenic 35.0%
AAGATGTCACTACACTTGAT+TGG - chr5_2:10469305-10469324 Msa0756290:three_prime_UTR 35.0%
TGATTGGAATGTGAGTTTGA+TGG - chr5_2:10469321-10469340 Msa0756290:three_prime_UTR 35.0%
GAAGTCACTATCAGTAATCA+TGG + chr5_2:10469364-10469383 None:intergenic 35.0%
! TGTATCTTTTTCTCACCTGT+TGG - chr5_2:10469421-10469440 Msa0756290:three_prime_UTR 35.0%
TACTCCTACACACATGTTAA+GGG - chr5_2:10469887-10469906 Msa0756290:intron 35.0%
TAACACCAAAGCAGTCTAAT+AGG + chr5_2:10469913-10469932 None:intergenic 35.0%
!! TAGACTGCTTTGGTGTTATT+CGG - chr5_2:10469915-10469934 Msa0756290:intron 35.0%
! TTGATCCCCCATTTCTTTTT+AGG - chr5_2:10470134-10470153 Msa0756290:intron 35.0%
! TGATCCCCCATTTCTTTTTA+GGG - chr5_2:10470135-10470154 Msa0756290:intron 35.0%
ATGACCCTAAAAAGAAATGG+GGG + chr5_2:10470142-10470161 None:intergenic 35.0%
!! TAAGCATGTTTTTGCTGACA+TGG + chr5_2:10470227-10470246 None:intergenic 35.0%
TGGTCTATTCATTTCTGACA+TGG + chr5_2:10470260-10470279 None:intergenic 35.0%
TTTAACCTTTCTCTGGATCT+TGG + chr5_2:10470319-10470338 None:intergenic 35.0%
ATCCAGAGAAAGGTTAAACA+GGG - chr5_2:10470321-10470340 Msa0756290:intron 35.0%
! AAGGTATCACTCAATGAAGA+AGG + chr5_2:10470596-10470615 None:intergenic 35.0%
CCGAATACACGATCAAAATA+AGG + chr5_2:10470748-10470767 None:intergenic 35.0%
AGTACATTAAGCAAGCACAA+GGG - chr5_2:10470791-10470810 Msa0756290:intron 35.0%
TGATGAGACTGCAATTGTAT+GGG - chr5_2:10470871-10470890 Msa0756290:intron 35.0%
! ATGCTGTGCTTATACCTTTT+TGG - chr5_2:10471228-10471247 Msa0756290:intron 35.0%
! TGCTGTGCTTATACCTTTTT+GGG - chr5_2:10471229-10471248 Msa0756290:intron 35.0%
CTGTATAATCAATGCAGTAG+GGG + chr5_2:10471267-10471286 None:intergenic 35.0%
GAACCAATAAGCTAGTTAAC+TGG + chr5_2:10471479-10471498 None:intergenic 35.0%
TCTGGCAAAAAGACATTTAC+TGG + chr5_2:10471735-10471754 None:intergenic 35.0%
TTATTCCCTAATTGGTACCT+TGG + chr5_2:10471864-10471883 None:intergenic 35.0%
AAGCTGCATAGTTTAAAAGC+AGG + chr5_2:10471914-10471933 None:intergenic 35.0%
! AGGAGGTATATACTATCAGA+TGG - chr5_2:10471965-10471984 Msa0756290:intron 35.0%
CCCTAATAAGAAATTGGTGT+TGG - chr5_2:10472014-10472033 Msa0756290:intron 35.0%
GCCAACACCAATTTCTTATT+AGG + chr5_2:10472018-10472037 None:intergenic 35.0%
!! ATAAGAAATTGGTGTTGGCT+AGG - chr5_2:10472019-10472038 Msa0756290:intron 35.0%
ATGCTCTTCATTTACTTGCA+TGG - chr5_2:10472063-10472082 Msa0756290:intron 35.0%
TGCTCTTCATTTACTTGCAT+GGG - chr5_2:10472064-10472083 Msa0756290:intron 35.0%
GACGAGAAATACAGATGATA+GGG + chr5_2:10472125-10472144 None:intergenic 35.0%
TGACGAGAAATACAGATGAT+AGG + chr5_2:10472126-10472145 None:intergenic 35.0%
CATTTAGCAACCTAAGATTC+AGG + chr5_2:10472149-10472168 None:intergenic 35.0%
TTGAAGCATGCTTATTGAAC+GGG + chr5_2:10472242-10472261 None:intergenic 35.0%
AAATTAGAATTTGTGGGTGC+TGG - chr5_2:10472370-10472389 Msa0756290:intron 35.0%
AATTAGAATTTGTGGGTGCT+GGG - chr5_2:10472371-10472390 Msa0756290:intron 35.0%
TCATAATTTCTTCTATGGGG+TGG + chr5_2:10472421-10472440 None:intergenic 35.0%
TAAAAACATTTAGGGGGAGA+GGG + chr5_2:10472458-10472477 None:intergenic 35.0%
TTAAAAACATTTAGGGGGAG+AGG + chr5_2:10472459-10472478 None:intergenic 35.0%
TACATGCTGTATATTCAGTG+CGG - chr5_2:10472573-10472592 Msa0756290:CDS 35.0%
GCACTTTAAATTCCTCTACT+AGG - chr5_2:10472734-10472753 Msa0756290:intron 35.0%
TATCACACATTACCTAGTAG+AGG + chr5_2:10472749-10472768 None:intergenic 35.0%
! TTTTGTAGAATGTGAAGAGG+GGG + chr5_2:10472952-10472971 None:intergenic 35.0%
! GGATTTTGTAGAATGTGAAG+AGG + chr5_2:10472955-10472974 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG - chr5_2:10473020-10473039 Msa0756290:intron 35.0%
!!! GAAGGATTTTTTTTTGGTGG+TGG + chr5_2:10473060-10473079 None:intergenic 35.0%
CAAATGATGCACTGTACAAA+AGG + chr5_2:10473325-10473344 None:intergenic 35.0%
CATTGGCAAGAATATATGGA+CGG - chr5_2:10473443-10473462 Msa0756290:intron 35.0%
ATTGGCAAGAATATATGGAC+GGG - chr5_2:10473444-10473463 Msa0756290:intron 35.0%
TTAATAACAAGCAGGATGCT+GGG + chr5_2:10473493-10473512 None:intergenic 35.0%
!! ATTCTAGTTTATCTGGTTGG+TGG - chr5_2:10473571-10473590 Msa0756290:intron 35.0%
AATGATCTTGCCATCATTCA+AGG + chr5_2:10473776-10473795 None:intergenic 35.0%
AAAACATACAATGGCAATGG+AGG - chr5_2:10473796-10473815 Msa0756290:intron 35.0%
!!! GAACTGTATTTTGGTTCAGT+AGG - chr5_2:10473982-10474001 Msa0756290:intron 35.0%
AAAAGAATACACTCCCAACT+AGG + chr5_2:10474080-10474099 None:intergenic 35.0%
TTCTAATTTCTTCTCGCATC+CGG + chr5_2:10474171-10474190 None:intergenic 35.0%
GTATTTGGACAATAGCCGAA+CGG - chr5_2:10469194-10469213 Msa0756290:three_prime_UTR 40.0%
!! TTGGTGTTGCAACACATCAA+GGG - chr5_2:10469256-10469275 Msa0756290:three_prime_UTR 40.0%
! GAAAAATTTGGGGCAAGCTT+GGG + chr5_2:10469783-10469802 None:intergenic 40.0%
AATAGGAGAAGAGGAACCAT+GGG + chr5_2:10469853-10469872 None:intergenic 40.0%
CTTAACATGTGTGTAGGAGT+AGG + chr5_2:10469888-10469907 None:intergenic 40.0%
CTACTCCTACACACATGTTA+AGG - chr5_2:10469886-10469905 Msa0756290:intron 40.0%
!! AGACTGCTTTGGTGTTATTC+GGG - chr5_2:10469916-10469935 Msa0756290:intron 40.0%
GGGACTGTAAGATAATGACT+GGG - chr5_2:10469936-10469955 Msa0756290:intron 40.0%
ACCATGAGCATAAGAGAAGA+GGG + chr5_2:10469971-10469990 None:intergenic 40.0%
AACCATGAGCATAAGAGAAG+AGG + chr5_2:10469972-10469991 None:intergenic 40.0%
!!! GGTCTCCCTGTTTTAAAAGT+CGG - chr5_2:10470068-10470087 Msa0756290:intron 40.0%
ATGACCCAAAAACGAGACAA+AGG - chr5_2:10470291-10470310 Msa0756290:intron 40.0%
TGACCCAAAAACGAGACAAA+GGG - chr5_2:10470292-10470311 Msa0756290:intron 40.0%
GATCCAGAGAAAGGTTAAAC+AGG - chr5_2:10470320-10470339 Msa0756290:intron 40.0%
TCCAGAGAAAGGTTAAACAG+GGG - chr5_2:10470322-10470341 Msa0756290:intron 40.0%
ATGATGGTCATGCACGAATT+TGG - chr5_2:10470538-10470557 Msa0756290:intron 40.0%
GAATTTGGACCACTAATGGT+AGG - chr5_2:10470553-10470572 Msa0756290:intron 40.0%
AATGTACTCTTCAGTTCACC+TGG + chr5_2:10470779-10470798 None:intergenic 40.0%
GAGTACATTAAGCAAGCACA+AGG - chr5_2:10470790-10470809 Msa0756290:intron 40.0%
! GAGCCATACTTTCTTTGAAG+TGG - chr5_2:10470813-10470832 Msa0756290:intron 40.0%
GTGATGAGACTGCAATTGTA+TGG - chr5_2:10470870-10470889 Msa0756290:intron 40.0%
! AAAAACTTTTATCGGGCACC+AGG - chr5_2:10471159-10471178 Msa0756290:intron 40.0%
ACAAGGTAGGTGTATAAACC+TGG + chr5_2:10471180-10471199 None:intergenic 40.0%
!! TGTGCTTATACCTTTTTGGG+AGG - chr5_2:10471232-10471251 Msa0756290:intron 40.0%
!! GTGCTTATACCTTTTTGGGA+GGG - chr5_2:10471233-10471252 Msa0756290:intron 40.0%
! GATAGTTTTCCCTCCCAAAA+AGG + chr5_2:10471245-10471264 None:intergenic 40.0%
TTTCAAATTCACCAGCAGTG+CGG - chr5_2:10471398-10471417 Msa0756290:intron 40.0%
AGTGTTATCGTCTGAACATG+AGG + chr5_2:10471635-10471654 None:intergenic 40.0%
TTCAGACGATAACACTGCAA+AGG - chr5_2:10471639-10471658 Msa0756290:intron 40.0%
!!! TGATTTTAGGGAGCATTCCA+AGG - chr5_2:10471844-10471863 Msa0756290:intron 40.0%
! AGCATTCCAAGGTACCAATT+AGG - chr5_2:10471855-10471874 Msa0756290:intron 40.0%
! GCATTCCAAGGTACCAATTA+GGG - chr5_2:10471856-10471875 Msa0756290:intron 40.0%
TATTTGTACCAGGACCAGTA+GGG + chr5_2:10471993-10472012 None:intergenic 40.0%
TTATTTGTACCAGGACCAGT+AGG + chr5_2:10471994-10472013 None:intergenic 40.0%
TTTCTCGTCACCTGAATCTT+AGG - chr5_2:10472136-10472155 Msa0756290:intron 40.0%
GTGAAAGCGAATGTTGAACA+TGG + chr5_2:10472346-10472365 None:intergenic 40.0%
ATTTGTAGTTGTTGGGCTCT+GGG + chr5_2:10472496-10472515 None:intergenic 40.0%
TATTTGTAGTTGTTGGGCTC+TGG + chr5_2:10472497-10472516 None:intergenic 40.0%
TACAATAGCATTACCGACAC+CGG - chr5_2:10472515-10472534 Msa0756290:CDS 40.0%
TTTGTAGAATGTGAAGAGGG+GGG + chr5_2:10472951-10472970 None:intergenic 40.0%
TCACGAGGACGAAAATTTGA+AGG + chr5_2:10472976-10472995 None:intergenic 40.0%
GCATAATATATGCAAGGTCC+GGG - chr5_2:10473021-10473040 Msa0756290:intron 40.0%
CATAATATATGCAAGGTCCG+GGG - chr5_2:10473022-10473041 Msa0756290:intron 40.0%
!!! ATTTTTTTTTGGTGGTGGCC+GGG + chr5_2:10473055-10473074 None:intergenic 40.0%
!!! GATTTTTTTTTGGTGGTGGC+CGG + chr5_2:10473056-10473075 None:intergenic 40.0%
TTGACTCTACCGTAAAGCTA+TGG - chr5_2:10473342-10473361 Msa0756290:intron 40.0%
TGACTCTACCGTAAAGCTAT+GGG - chr5_2:10473343-10473362 Msa0756290:intron 40.0%
TTTATAGCTTGAGTGGACAC+AGG - chr5_2:10473387-10473406 Msa0756290:intron 40.0%
CTTAATAACAAGCAGGATGC+TGG + chr5_2:10473494-10473513 None:intergenic 40.0%
!! GCATCCTGCTTGTTATTAAG+CGG - chr5_2:10473494-10473513 Msa0756290:intron 40.0%
TTGACCGCTTAATAACAAGC+AGG + chr5_2:10473501-10473520 None:intergenic 40.0%
TCTGTTGCATTTAGTCCCAA+TGG - chr5_2:10473703-10473722 Msa0756290:intron 40.0%
CTGGCTAAATACTCACCATT+GGG + chr5_2:10473721-10473740 None:intergenic 40.0%
ACTGGCTAAATACTCACCAT+TGG + chr5_2:10473722-10473741 None:intergenic 40.0%
AATGGTGAGTATTTAGCCAG+TGG - chr5_2:10473721-10473740 Msa0756290:intron 40.0%
ATGGTGAGTATTTAGCCAGT+GGG - chr5_2:10473722-10473741 Msa0756290:intron 40.0%
!!! TGGCAATGGAGGTATTTTTG+AGG - chr5_2:10473807-10473826 Msa0756290:intron 40.0%
!!! GAGGTATTTTTGAGGTCTGT+TGG - chr5_2:10473815-10473834 Msa0756290:intron 40.0%
!!! TTTTGAGGTCTGTTGGAACA+AGG - chr5_2:10473822-10473841 Msa0756290:intron 40.0%
TTGAGCAACTAGCCAAAGTA+AGG + chr5_2:10473930-10473949 None:intergenic 40.0%
GGGATTCAACAGCTCGTATT+TGG - chr5_2:10469179-10469198 Msa0756290:three_prime_UTR 45.0%
!! GTTGGTGTTGCAACACATCA+AGG - chr5_2:10469255-10469274 Msa0756290:three_prime_UTR 45.0%
TATGTGAGCTAAGCTCCTTG+CGG - chr5_2:10469687-10469706 Msa0756290:intron 45.0%
! GGAAAAATTTGGGGCAAGCT+TGG + chr5_2:10469784-10469803 None:intergenic 45.0%
CATGATTGGGAGGGAGAATA+TGG + chr5_2:10469805-10469824 None:intergenic 45.0%
TAGTAACAAAGGCCTGCAAG+TGG + chr5_2:10469828-10469847 None:intergenic 45.0%
ACTTGCAGGCCTTTGTTACT+AGG - chr5_2:10469827-10469846 Msa0756290:intron 45.0%
AACCATGGGCCTAGTAACAA+AGG + chr5_2:10469839-10469858 None:intergenic 45.0%
GAATAGGAGAAGAGGAACCA+TGG + chr5_2:10469854-10469873 None:intergenic 45.0%
AGGAGTAGGAATAGGAGAAG+AGG + chr5_2:10469862-10469881 None:intergenic 45.0%
GTAGGAGTAGGAGTAGGAAT+AGG + chr5_2:10469870-10469889 None:intergenic 45.0%
ATGTGTGTAGGAGTAGGAGT+AGG + chr5_2:10469882-10469901 None:intergenic 45.0%
TAGGCCCTTAACATGTGTGT+AGG + chr5_2:10469894-10469913 None:intergenic 45.0%
AAGGGCCTATTAGACTGCTT+TGG - chr5_2:10469905-10469924 Msa0756290:intron 45.0%
CGGGACTGTAAGATAATGAC+TGG - chr5_2:10469935-10469954 Msa0756290:intron 45.0%
TCCCTCTTCTCTTATGCTCA+TGG - chr5_2:10469967-10469986 Msa0756290:intron 45.0%
GCTGACATGGATATTCAGTG+AGG + chr5_2:10470214-10470233 None:intergenic 45.0%
!! GGTCCCTTTGTCTCGTTTTT+GGG + chr5_2:10470298-10470317 None:intergenic 45.0%
! TGGTCCCTTTGTCTCGTTTT+TGG + chr5_2:10470299-10470318 None:intergenic 45.0%
TCCCCTGTTTAACCTTTCTC+TGG + chr5_2:10470326-10470345 None:intergenic 45.0%
! TTTGGTGGCTGTGTTGTACA+GGG - chr5_2:10470486-10470505 Msa0756290:intron 45.0%
TGCATGACCATCATAAGCAC+CGG + chr5_2:10470532-10470551 None:intergenic 45.0%
GCACGAATTTGGACCACTAA+TGG - chr5_2:10470549-10470568 Msa0756290:intron 45.0%
AAGAAAGGGCCTACCATTAG+TGG + chr5_2:10470565-10470584 None:intergenic 45.0%
GTCTGATTTAGTTGCGTTCG+TGG - chr5_2:10470635-10470654 Msa0756290:intron 45.0%
GGGATGTTCATGCAGAGAAA+TGG - chr5_2:10470891-10470910 Msa0756290:intron 45.0%
AACATGAATCATGGCGTCAG+TGG + chr5_2:10471113-10471132 None:intergenic 45.0%
TTCAAATTCACCAGCAGTGC+GGG - chr5_2:10471399-10471418 Msa0756290:intron 45.0%
TGTATCAAATGGGATCCCAC+AGG - chr5_2:10471598-10471617 Msa0756290:intron 45.0%
!! TAGTGCTCTAAGGGAGCATT+TGG - chr5_2:10472196-10472215 Msa0756290:CDS 45.0%
GAAAGGTGAGTAGCAGAACA+AGG + chr5_2:10472895-10472914 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr5_2:10472993-10473012 Msa0756290:intron 45.0%
!!! TTTTTTTTTGGTGGTGGCCG+GGG + chr5_2:10473054-10473073 None:intergenic 45.0%
TACCGTAAAGCTATGGGATG+CGG - chr5_2:10473349-10473368 Msa0756290:intron 45.0%
! TTCCGCATCCCATAGCTTTA+CGG + chr5_2:10473354-10473373 None:intergenic 45.0%
CTTGACAACATTTCAGGCTC+TGG - chr5_2:10473601-10473620 Msa0756290:intron 45.0%
! ACATTTCAGGCTCTGGTAGT+TGG - chr5_2:10473608-10473627 Msa0756290:intron 45.0%
AAAGTAAGGTGGCTCTTCTC+AGG + chr5_2:10473916-10473935 None:intergenic 45.0%
TGAGAAGAGCCACCTTACTT+TGG - chr5_2:10473915-10473934 Msa0756290:intron 45.0%
AGCAACTAGCCAAAGTAAGG+TGG + chr5_2:10473927-10473946 None:intergenic 45.0%
!!! TTTTTTTTTTTTTAATTTAG+GGG - chr5_2:10470388-10470407 Msa0756290:intron 5.0%
!!! CTATTTTTATTTTTAATATT+TGG - chr5_2:10471025-10471044 Msa0756290:intron 5.0%
GCAACACCAACACAGTCGAA+GGG + chr5_2:10469246-10469265 None:intergenic 50.0%
TGCAACACCAACACAGTCGA+AGG + chr5_2:10469247-10469266 None:intergenic 50.0%
CTGCTCAAGAAAGCTCCAAC+AGG + chr5_2:10469439-10469458 None:intergenic 50.0%
! AATTTGGGGCAAGCTTGGGA+GGG + chr5_2:10469779-10469798 None:intergenic 50.0%
! AAATTTGGGGCAAGCTTGGG+AGG + chr5_2:10469780-10469799 None:intergenic 50.0%
TGCAAGTGGCATGATTGGGA+GGG + chr5_2:10469814-10469833 None:intergenic 50.0%
GTAGGAGTAGGAGTAGGAGT+AGG + chr5_2:10469876-10469895 None:intergenic 50.0%
AGGGACCAAGATCCAGAGAA+AGG - chr5_2:10470311-10470330 Msa0756290:intron 50.0%
CTTATGGAGAGCCTGACCTT+TGG - chr5_2:10470468-10470487 Msa0756290:intron 50.0%
CTGTACAACACAGCCACCAA+AGG + chr5_2:10470487-10470506 None:intergenic 50.0%
! CTTTGGTGGCTGTGTTGTAC+AGG - chr5_2:10470485-10470504 Msa0756290:intron 50.0%
! TTGGTGGCTGTGTTGTACAG+GGG - chr5_2:10470487-10470506 Msa0756290:intron 50.0%
CTTGCAACCGGTGCTTATGA+TGG - chr5_2:10470522-10470541 Msa0756290:intron 50.0%
GTCCAACGCTTGACGTTGAT+TGG - chr5_2:10471059-10471078 Msa0756290:intron 50.0%
GGATCCCACAGGTTCATTAC+TGG - chr5_2:10471609-10471628 Msa0756290:intron 50.0%
GAGGCCAGTAATGAACCTGT+GGG + chr5_2:10471616-10471635 None:intergenic 50.0%
TGAGGCCAGTAATGAACCTG+TGG + chr5_2:10471617-10471636 None:intergenic 50.0%
ACTATCAGATGGAGCCCTAC+TGG - chr5_2:10471976-10471995 Msa0756290:intron 50.0%
GCTGGGAATCAAAGACTGGA+CGG - chr5_2:10472388-10472407 Msa0756290:intron 50.0%
! CATTACCGACACCGGTTGTA+GGG - chr5_2:10472523-10472542 Msa0756290:CDS 50.0%
! ATTACCGACACCGGTTGTAG+GGG - chr5_2:10472524-10472543 Msa0756290:CDS 50.0%
TGACCGTGACCGAATATCTG+CGG - chr5_2:10472659-10472678 Msa0756290:intron 50.0%
AAGGTGCAGCCGCAGATATT+CGG + chr5_2:10472671-10472690 None:intergenic 50.0%
AAGCTATGGGATGCGGAACT+CGG - chr5_2:10473356-10473375 Msa0756290:intron 50.0%
ATAACAAGCAGGATGCTGGG+AGG + chr5_2:10473490-10473509 None:intergenic 50.0%
TGAGGTCTGTTGGAACAAGG+AGG - chr5_2:10473825-10473844 Msa0756290:intron 50.0%
GAGGTCTGTTGGAACAAGGA+GGG - chr5_2:10473826-10473845 Msa0756290:intron 50.0%
CACAGTCGAAGGGTCGTTCT+TGG + chr5_2:10469236-10469255 None:intergenic 55.0%
GAACGACCCTTCGACTGTGT+TGG - chr5_2:10469237-10469256 Msa0756290:three_prime_UTR 55.0%
CTGCAAGTGGCATGATTGGG+AGG + chr5_2:10469815-10469834 None:intergenic 55.0%
! CTCCCAATCATGCCACTTGC+AGG - chr5_2:10469813-10469832 Msa0756290:intron 55.0%
GGCCTGCAAGTGGCATGATT+GGG + chr5_2:10469818-10469837 None:intergenic 55.0%
AGGCCTGCAAGTGGCATGAT+TGG + chr5_2:10469819-10469838 None:intergenic 55.0%
GGCCTTTGTTACTAGGCCCA+TGG - chr5_2:10469834-10469853 Msa0756290:intron 55.0%
ATGGAGAGCCTGACCTTTGG+TGG - chr5_2:10470471-10470490 Msa0756290:intron 55.0%
CAACACAGCCACCAAAGGTC+AGG + chr5_2:10470482-10470501 None:intergenic 55.0%
TGGTGGCTGTGTTGTACAGG+GGG - chr5_2:10470488-10470507 Msa0756290:intron 55.0%
GAGGGGACACTACTTGCAAC+CGG - chr5_2:10470510-10470529 Msa0756290:intron 55.0%
! GTGTATTCGGGGCTTTGACC+AGG - chr5_2:10470758-10470777 Msa0756290:intron 55.0%
CGCCAATCAACGTCAAGCGT+TGG + chr5_2:10471064-10471083 None:intergenic 55.0%
!! GGGTGCTGGGAATCAAAGAC+TGG - chr5_2:10472384-10472403 Msa0756290:intron 55.0%
GGGAATCAAAGACTGGACGG+AGG - chr5_2:10472391-10472410 Msa0756290:intron 55.0%
ATCAAAGACTGGACGGAGGC+AGG - chr5_2:10472395-10472414 Msa0756290:intron 55.0%
! GCATTACCGACACCGGTTGT+AGG - chr5_2:10472522-10472541 Msa0756290:CDS 55.0%
TCTCAGCTGACCCCTACAAC+CGG + chr5_2:10472537-10472556 None:intergenic 55.0%
CAGCCGCAGATATTCGGTCA+CGG + chr5_2:10472665-10472684 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr5_2:10472991-10473010 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr5_2:10472988-10473007 Msa0756290:intron 55.0%
AGCTATGGGATGCGGAACTC+GGG - chr5_2:10473357-10473376 Msa0756290:intron 55.0%
AGCTAAGCTCCTTGCGGCTC+AGG - chr5_2:10469693-10469712 Msa0756290:intron 60.0%
GCATTCTTGCCTGAGCCGCA+AGG + chr5_2:10469705-10469724 None:intergenic 60.0%
TGGCTGTGTTGTACAGGGGG+AGG - chr5_2:10470491-10470510 Msa0756290:intron 60.0%
GGCTGTGTTGTACAGGGGGA+GGG - chr5_2:10470492-10470511 Msa0756290:intron 60.0%
GCTGTGTTGTACAGGGGGAG+GGG - chr5_2:10470493-10470512 Msa0756290:intron 60.0%
CCAATGAAGTCCCGCACTGC+TGG + chr5_2:10471412-10471431 None:intergenic 60.0%
CCAGCAGTGCGGGACTTCAT+TGG - chr5_2:10471409-10471428 Msa0756290:intron 60.0%
AGATGGAGCCCTACTGGTCC+TGG - chr5_2:10471982-10472001 Msa0756290:intron 60.0%
CTGACCCCTACAACCGGTGT+CGG + chr5_2:10472531-10472550 None:intergenic 60.0%
AAGGTCCGGGGTTCAAACCC+CGG - chr5_2:10473034-10473053 Msa0756290:intron 60.0%
ACAAGCAGGATGCTGGGAGG+AGG + chr5_2:10473487-10473506 None:intergenic 60.0%
GGATTTGTCAGGGGACCCAC+TGG + chr5_2:10473740-10473759 None:intergenic 60.0%
TTGCATCCTCGGTCTGCTGC+CGG - chr5_2:10474149-10474168 Msa0756290:CDS 60.0%
GGTGGCCGGGGTTTGAACCC+CGG + chr5_2:10473042-10473061 None:intergenic 70.0%
TCGCATCCGGCAGCAGACCG+AGG + chr5_2:10474158-10474177 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 10469175 10474201 10469175 ID=Msa0756290;Name=Msa0756290
chr5_2 mRNA 10469175 10474201 10469175 ID=Msa0756290-mRNA-1;Parent=Msa0756290;Name=Msa0756290-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.88|1|1|0.88|9|292|332
chr5_2 exon 10469175 10469686 10469175 ID=Msa0756290-mRNA-1:exon:4761;Parent=Msa0756290-mRNA-1
chr5_2 exon 10469968 10470042 10469968 ID=Msa0756290-mRNA-1:exon:4760;Parent=Msa0756290-mRNA-1
chr5_2 exon 10471336 10471409 10471336 ID=Msa0756290-mRNA-1:exon:4759;Parent=Msa0756290-mRNA-1
chr5_2 exon 10471511 10471564 10471511 ID=Msa0756290-mRNA-1:exon:4758;Parent=Msa0756290-mRNA-1
chr5_2 exon 10471716 10471790 10471716 ID=Msa0756290-mRNA-1:exon:4757;Parent=Msa0756290-mRNA-1
chr5_2 exon 10472196 10472317 10472196 ID=Msa0756290-mRNA-1:exon:4756;Parent=Msa0756290-mRNA-1
chr5_2 exon 10472438 10472596 10472438 ID=Msa0756290-mRNA-1:exon:4755;Parent=Msa0756290-mRNA-1
chr5_2 exon 10472806 10472869 10472806 ID=Msa0756290-mRNA-1:exon:4754;Parent=Msa0756290-mRNA-1
chr5_2 exon 10474046 10474201 10474046 ID=Msa0756290-mRNA-1:exon:4753;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10474046 10474201 10474046 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10472806 10472869 10472806 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10472438 10472596 10472438 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10472196 10472317 10472196 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10471716 10471790 10471716 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10471511 10471564 10471511 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10471336 10471409 10471336 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10469968 10470042 10469968 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 CDS 10469467 10469686 10469467 ID=Msa0756290-mRNA-1:cds;Parent=Msa0756290-mRNA-1
chr5_2 three_prime_UTR 10469175 10469466 10469175 ID=Msa0756290-mRNA-1:three_prime_utr;Parent=Msa0756290-mRNA-1
Gene Sequence

>Msa0756290

TCTGGGGATTCAACAGCTCGTATTTGGACAATAGCCGAACGGACACGTAAATTAGATTCCAAGAACGACCCTTCGACTGTGTTGGTGTTGCAACACATCAAGGGTACAGCCAATGAAAAGAGTAAAGATAAAGATGTCACTACACTTGATTGGAATGGGGAGGGGACACTACTTGCAACCGGTGCTTATGATGGTCATGCACGAATTTGGACCACTAATGGTGAACTGAAGAGTACATTAAGCAAGCACAAGGGAGCCATACTTTCTTTGAAGTGGAATAAGAAAGGAGATTATATTCTTACTGGAAGTTGTGATGAGACTGCAATTGTATGGGATGTTCATGCAGAGAAATGGAAACAACAATTTGCTTTTCATAAAGGTCCAACGCTTGACGTTGATTGGCGCAACAATGTATCGTTTGCATCAAGCTCCACTGACGCCATGATTCATGTTTGCAAGATTGGCGATAACCTCCCAATAAAAACTTTTATCGGGCACCAGAGTGAAGTTAATTGTATCAAATGGGATCCCACAGGTTCATTACTGGCCTCATGTTCAGACGATAACACTGCAAAGATATGGAGTATGAAGCAAGATAAGTATATTCATGATTTTAGGGAGCATTCCAAGGAGGTATATACTATCAGATGGAGCCCTACTGGTCCTGGTACAAATAACCCTAATAAGAAATTGGTGTTGGCTAGTGCATCATTTGACTCTACCGTAAAGCTATGGGATGCGGAACTCGGGAAATTAATTTATAGCTTGAGTGGACACAGAGATGGTGTATATTCTGTTGCATTTAGTCCCAATGGTGAGTATTTAGCCAGTGGGTCCCCTGACAAATCCATAAATATATGGTCCTTGAATGATGGCAAGATCATTAAAACATACAATGGCAATGGAGGTATTTTTGAGGTCTGTTGGAACAAGGAGGGTGACAAGATCGCTGCCTGTTTTTCTAACAATACTGTTTGCGTTTTGGATTTCAGAATGTAA
Protein sequence

>Msa0756290

SGDSTARIWTIAERTRKLDSKNDPSTVLVLQHIKGTANEKSKDKDVTTLDWNGEGTLLATGAYDGHARIWTTNGELKSTLSKHKGAILSLKWNKKGDYILTGSCDETAIVWDVHAEKWKQQFAFHKGPTLDVDWRNNVSFASSSTDAMIHVCKIGDNLPIKTFIGHQSEVNCIKWDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEVYTIRWSPTGPGTNNPNKKLVLASASFDSTVKLWDAELGKLIYSLSGHRDGVYSVAFSPNGEYLASGSPDKSINIWSLNDGKIIKTYNGNGGIFEVCWNKEGDKIAACFSNNTVCVLDFRM*