Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076280 | sp|Q9SV13|SUT31_ARATH | 74.394 | 660 | 163 | 4 | 1 | 656 | 1 | 658 | 0.0 | 1018 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076280 | G7IDK9 | 98.628 | 656 | 9 | 0 | 1 | 656 | 1 | 656 | 0.0 | 1336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028610 | Msa0076280 | 0.990981 | 2.728449e-185 | -8.615850e-47 |
| Msa0030710 | Msa0076280 | 0.817117 | 3.894223e-52 | -8.615850e-47 |
| Msa0035090 | Msa0076280 | 0.852155 | 5.557987e-61 | -8.615850e-47 |
| Msa0074310 | Msa0076280 | 0.838623 | 2.575650e-57 | -8.615850e-47 |
| Msa0076280 | Msa0078110 | 0.803477 | 3.422193e-49 | -8.615850e-47 |
| Msa0076280 | Msa0083200 | 0.827934 | 1.189027e-54 | -8.615850e-47 |
| Msa0076280 | Msa0083570 | 0.803229 | 3.850961e-49 | -8.615850e-47 |
| Msa0076280 | Msa0092750 | 0.806092 | 9.728885e-50 | -8.615850e-47 |
| Msa0076280 | Msa0096230 | 0.814225 | 1.717375e-51 | -8.615850e-47 |
| Msa0076280 | Msa0099830 | 0.826107 | 3.252489e-54 | -8.615850e-47 |
| Msa0076280 | Msa0124310 | 0.986727 | 9.150542e-168 | -8.615850e-47 |
| Msa0076280 | Msa0130120 | 0.841084 | 5.888545e-58 | -8.615850e-47 |
| Msa0076280 | Msa0168680 | 0.972013 | 4.444715e-134 | -8.615850e-47 |
| Msa0076280 | Msa0175900 | 0.842749 | 2.138345e-58 | -8.615850e-47 |
| Msa0076280 | Msa0181740 | 0.804198 | 2.423243e-49 | -8.615850e-47 |
| Msa0076280 | Msa0187720 | 0.837135 | 6.212905e-57 | -8.615850e-47 |
| Msa0076280 | Msa0189050 | 0.802023 | 6.828766e-49 | -8.615850e-47 |
| Msa0076280 | Msa0207530 | 0.832131 | 1.126214e-55 | -8.615850e-47 |
| Msa0076280 | Msa0207900 | 0.822009 | 2.979173e-53 | -8.615850e-47 |
| Msa0076280 | Msa0207990 | 0.803403 | 3.544656e-49 | -8.615850e-47 |
| Msa0076280 | Msa0216010 | 0.800488 | 1.407468e-48 | -8.615850e-47 |
| Msa0076280 | Msa0231310 | 0.803027 | 4.240212e-49 | -8.615850e-47 |
| Msa0076280 | Msa0268540 | 0.806310 | 8.752932e-50 | -8.615850e-47 |
| Msa0076280 | Msa0285710 | 0.800178 | 1.627915e-48 | -8.615850e-47 |
| Msa0076280 | Msa0301800 | 0.820455 | 6.796784e-53 | -8.615850e-47 |
| Msa0076280 | Msa0307490 | 0.861450 | 1.017474e-63 | -8.615850e-47 |
| Msa0076280 | Msa0370510 | 0.814226 | 1.716078e-51 | -8.615850e-47 |
| Msa0076280 | Msa0385400 | 0.803064 | 4.165633e-49 | -8.615850e-47 |
| Msa0076280 | Msa0392410 | 0.809680 | 1.678476e-50 | -8.615850e-47 |
| Msa0076280 | Msa0392480 | 0.804372 | 2.229851e-49 | -8.615850e-47 |
| Msa0076280 | Msa0420080 | 0.814488 | 1.501829e-51 | -8.615850e-47 |
| Msa0076280 | Msa0433350 | 0.834674 | 2.614254e-56 | -8.615850e-47 |
| Msa0076280 | Msa0434630 | 0.801004 | 1.104849e-48 | -8.615850e-47 |
| Msa0076280 | Msa0466090 | 0.802074 | 6.667294e-49 | -8.615850e-47 |
| Msa0076280 | Msa0477070 | 0.834658 | 2.639157e-56 | -8.615850e-47 |
| Msa0076280 | Msa0481620 | 0.803132 | 4.033262e-49 | -8.615850e-47 |
| Msa0076280 | Msa0487560 | 0.803348 | 3.639671e-49 | -8.615850e-47 |
| Msa0076280 | Msa0493640 | 0.841321 | 5.100236e-58 | -8.615850e-47 |
| Msa0076280 | Msa0521440 | 0.838543 | 2.701084e-57 | -8.615850e-47 |
| Msa0076280 | Msa0570310 | 0.818895 | 1.543463e-52 | -8.615850e-47 |
| Msa0076280 | Msa0577140 | 0.862794 | 3.936429e-64 | -8.615850e-47 |
| Msa0076280 | Msa0581440 | 0.822176 | 2.724359e-53 | -8.615850e-47 |
| Msa0076280 | Msa0587060 | 0.808991 | 2.358790e-50 | -8.615850e-47 |
| Msa0076280 | Msa0624890 | 0.809987 | 1.441953e-50 | -8.615850e-47 |
| Msa0076280 | Msa0659640 | 0.803490 | 3.400445e-49 | -8.615850e-47 |
| Msa0076280 | Msa0665010 | 0.813434 | 2.564464e-51 | -8.615850e-47 |
| Msa0076280 | Msa0704750 | 0.845473 | 3.974660e-59 | -8.615850e-47 |
| Msa0076280 | Msa0706710 | 0.803193 | 3.918580e-49 | -8.615850e-47 |
| Msa0076280 | Msa0707870 | 0.803932 | 2.753545e-49 | -8.615850e-47 |
| Msa0076280 | Msa0727020 | 0.808332 | 3.262833e-50 | -8.615850e-47 |
| Msa0076280 | Msa0733570 | 0.810503 | 1.115776e-50 | -8.615850e-47 |
| Msa0076280 | Msa0736330 | 0.817479 | 3.228070e-52 | -8.615850e-47 |
| Msa0076280 | Msa0774680 | 0.809345 | 1.980848e-50 | -8.615850e-47 |
| Msa0076280 | Msa0778060 | 0.804280 | 2.330256e-49 | -8.615850e-47 |
| Msa0076280 | Msa0786970 | 0.848805 | 4.850006e-60 | -8.615850e-47 |
| Msa0076280 | Msa0794040 | 0.820682 | 6.028925e-53 | -8.615850e-47 |
| Msa0076280 | Msa0811710 | 0.815024 | 1.142292e-51 | -8.615850e-47 |
| Msa0076280 | Msa0821490 | 0.811981 | 5.334765e-51 | -8.615850e-47 |
| Msa0076280 | Msa0822380 | 0.832985 | 6.913336e-56 | -8.615850e-47 |
| Msa0076280 | Msa0855490 | 0.820940 | 5.258628e-53 | -8.615850e-47 |
| Msa0076280 | Msa0866960 | 0.831690 | 1.446988e-55 | -8.615850e-47 |
| Msa0076280 | Msa0868140 | 0.800650 | 1.304663e-48 | -8.615850e-47 |
| Msa0076280 | Msa0907520 | 0.807763 | 4.312603e-50 | -8.615850e-47 |
| Msa0076280 | Msa1020500 | 0.824440 | 8.064083e-54 | -8.615850e-47 |
| Msa0076280 | Msa1025610 | 0.801961 | 7.032901e-49 | -8.615850e-47 |
| Msa0076280 | Msa1049440 | 0.815372 | 9.562909e-52 | -8.615850e-47 |
| Msa0076280 | Msa1051410 | 0.861601 | 9.150234e-64 | -8.615850e-47 |
| Msa0076280 | Msa1072770 | 0.809137 | 2.194834e-50 | -8.615850e-47 |
| Msa0076280 | Msa1084630 | 0.868900 | 4.628242e-66 | -8.615850e-47 |
| Msa0076280 | Msa1086060 | 0.818737 | 1.676662e-52 | -8.615850e-47 |
| Msa0076280 | Msa1086160 | 0.818768 | 1.650140e-52 | -8.615850e-47 |
| Msa0076280 | Msa1086830 | 0.813612 | 2.343837e-51 | -8.615850e-47 |
| Msa0076280 | Msa1122480 | 0.824328 | 8.565993e-54 | -8.615850e-47 |
| Msa0076280 | Msa1132320 | 0.816444 | 5.512442e-52 | -8.615850e-47 |
| Msa0076280 | Msa1161120 | 0.816464 | 5.456940e-52 | -8.615850e-47 |
| Msa0076280 | Msa1203090 | 0.824178 | 9.289727e-54 | -8.615850e-47 |
| Msa0076280 | Msa1203210 | 0.804925 | 1.709469e-49 | -8.615850e-47 |
| Msa0076280 | Msa1221370 | 0.803962 | 2.714252e-49 | -8.615850e-47 |
| Msa0076280 | Msa1252040 | 0.805428 | 1.341500e-49 | -8.615850e-47 |
| Msa0076280 | Msa1255500 | 0.821202 | 4.576468e-53 | -8.615850e-47 |
| Msa0076280 | Msa1264230 | 0.843921 | 1.040705e-58 | -8.615850e-47 |
| Msa0076280 | Msa1265250 | 0.800360 | 1.495103e-48 | -8.615850e-47 |
| Msa0076280 | Msa1294520 | 0.802897 | 4.510763e-49 | -8.615850e-47 |
| Msa0076280 | Msa1302920 | 0.855757 | 5.092052e-62 | -8.615850e-47 |
| Msa0076280 | Msa1316160 | 0.813604 | 2.353068e-51 | -8.615850e-47 |
| Msa0076280 | Msa1351560 | 0.843717 | 1.179980e-58 | -8.615850e-47 |
| Msa0076280 | Msa1355020 | 0.807665 | 4.522740e-50 | -8.615850e-47 |
| Msa0076280 | Msa1365690 | 0.801783 | 7.649215e-49 | -8.615850e-47 |
| Msa0076280 | Msa1370830 | 0.802365 | 5.807215e-49 | -8.615850e-47 |
| Msa0076280 | Msa1371250 | 0.816550 | 5.219141e-52 | -8.615850e-47 |
| Msa0076280 | Msa1373590 | 0.810970 | 8.844030e-51 | -8.615850e-47 |
| Msa0076280 | Msa1380540 | 0.805991 | 1.021520e-49 | -8.615850e-47 |
| Msa0076280 | Msa1385940 | 0.802191 | 6.307810e-49 | -8.615850e-47 |
| Msa0076280 | Msa1389990 | 0.800128 | 1.666928e-48 | -8.615850e-47 |
| Msa0076280 | Msa1390410 | 0.800173 | 1.631815e-48 | -8.615850e-47 |
| Msa0076280 | Msa1394090 | 0.808248 | 3.399286e-50 | -8.615850e-47 |
| Msa0076280 | Msa1394280 | 0.801241 | 9.879526e-49 | -8.615850e-47 |
| Msa0076280 | Msa1400330 | 0.867637 | 1.181746e-65 | -8.615850e-47 |
| Msa0076280 | Msa1415120 | 0.819763 | 9.792844e-53 | -8.615850e-47 |
| Msa0076280 | Msa1438420 | 0.846233 | 2.470778e-59 | -8.615850e-47 |
| Msa0076280 | Msa1439160 | 0.800927 | 1.145210e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076280 | MtrunA17_Chr1g0185231 | 98.628 | 656 | 9 | 0 | 1 | 656 | 1 | 656 | 0.0 | 1336 |
| Msa0076280 | MtrunA17_Chr7g0260181 | 83.308 | 659 | 104 | 4 | 1 | 656 | 1 | 656 | 0.0 | 1095 |
| Msa0076280 | MtrunA17_Chr2g0331951 | 57.387 | 643 | 274 | 0 | 3 | 645 | 5 | 647 | 0.0 | 769 |
| Msa0076280 | MtrunA17_Chr4g0043931 | 55.864 | 648 | 281 | 3 | 4 | 649 | 1 | 645 | 0.0 | 753 |
| Msa0076280 | MtrunA17_Chr5g0425251 | 55.112 | 626 | 280 | 1 | 21 | 645 | 30 | 655 | 0.0 | 747 |
| Msa0076280 | MtrunA17_Chr4g0004261 | 56.230 | 626 | 274 | 0 | 20 | 645 | 29 | 654 | 0.0 | 737 |
| Msa0076280 | MtrunA17_Chr6g0485191 | 52.194 | 638 | 298 | 4 | 15 | 649 | 56 | 689 | 0.0 | 702 |
| Msa0076280 | MtrunA17_Chr3g0115481 | 54.299 | 628 | 283 | 3 | 21 | 645 | 33 | 659 | 0.0 | 701 |
| Msa0076280 | MtrunA17_Chr2g0278931 | 53.409 | 616 | 285 | 2 | 20 | 634 | 34 | 648 | 0.0 | 674 |
| Msa0076280 | MtrunA17_Chr4g0043951 | 57.169 | 544 | 225 | 1 | 10 | 545 | 3 | 546 | 0.0 | 655 |
| Msa0076280 | MtrunA17_Chr5g0425241 | 47.191 | 623 | 316 | 5 | 26 | 637 | 26 | 646 | 0.0 | 583 |
| Msa0076280 | MtrunA17_Chr3g0124381 | 46.591 | 616 | 323 | 5 | 27 | 638 | 37 | 650 | 0.0 | 575 |
| Msa0076280 | MtrunA17_Chr3g0115461 | 44.099 | 644 | 344 | 5 | 2 | 637 | 17 | 652 | 0.0 | 547 |
| Msa0076280 | MtrunA17_Chr3g0124371 | 38.782 | 624 | 362 | 9 | 27 | 636 | 34 | 651 | 6.42e-153 | 457 |
| Msa0076280 | MtrunA17_Chr7g0222631 | 36.222 | 577 | 354 | 7 | 65 | 637 | 70 | 636 | 1.33e-128 | 395 |
| Msa0076280 | MtrunA17_Chr1g0173031 | 46.702 | 379 | 139 | 9 | 20 | 398 | 29 | 344 | 9.77e-101 | 311 |
| Msa0076280 | MtrunA17_Chr4g0043961 | 41.772 | 79 | 46 | 0 | 567 | 645 | 1 | 79 | 1.45e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0076280 | AT3G51895.2 | 74.394 | 660 | 163 | 4 | 1 | 656 | 46 | 703 | 0.0 | 1018 |
| Msa0076280 | AT3G51895.1 | 74.394 | 660 | 163 | 4 | 1 | 656 | 1 | 658 | 0.0 | 1018 |
| Msa0076280 | AT4G02700.1 | 69.702 | 637 | 192 | 1 | 21 | 656 | 10 | 646 | 0.0 | 922 |
| Msa0076280 | AT3G15990.1 | 57.030 | 633 | 271 | 1 | 12 | 644 | 19 | 650 | 0.0 | 749 |
| Msa0076280 | AT1G23090.1 | 57.005 | 621 | 266 | 1 | 20 | 639 | 3 | 623 | 0.0 | 747 |
| Msa0076280 | AT4G08620.1 | 55.049 | 614 | 275 | 1 | 26 | 638 | 28 | 641 | 0.0 | 685 |
| Msa0076280 | AT5G19600.1 | 52.548 | 628 | 282 | 4 | 21 | 644 | 15 | 630 | 0.0 | 681 |
| Msa0076280 | AT1G78000.2 | 54.560 | 625 | 283 | 1 | 14 | 637 | 21 | 645 | 0.0 | 677 |
| Msa0076280 | AT1G78000.1 | 54.560 | 625 | 283 | 1 | 14 | 637 | 21 | 645 | 0.0 | 677 |
| Msa0076280 | AT1G78000.3 | 54.560 | 625 | 283 | 1 | 14 | 637 | 21 | 645 | 0.0 | 677 |
| Msa0076280 | AT1G22150.1 | 52.742 | 620 | 292 | 1 | 20 | 638 | 30 | 649 | 0.0 | 669 |
| Msa0076280 | AT1G22150.3 | 52.742 | 620 | 292 | 1 | 20 | 638 | 30 | 649 | 0.0 | 669 |
| Msa0076280 | AT1G22150.4 | 52.742 | 620 | 292 | 1 | 20 | 638 | 30 | 649 | 0.0 | 669 |
| Msa0076280 | AT1G78000.5 | 54.514 | 587 | 266 | 1 | 14 | 599 | 21 | 607 | 0.0 | 640 |
| Msa0076280 | AT1G78000.4 | 55.000 | 560 | 251 | 1 | 14 | 572 | 21 | 580 | 0.0 | 614 |
| Msa0076280 | AT1G22150.2 | 53.430 | 554 | 257 | 1 | 20 | 572 | 30 | 583 | 0.0 | 610 |
| Msa0076280 | AT5G10180.1 | 48.701 | 616 | 309 | 6 | 27 | 637 | 59 | 672 | 0.0 | 587 |
| Msa0076280 | AT1G23090.2 | 55.193 | 491 | 219 | 1 | 150 | 639 | 1 | 491 | 0.0 | 563 |
| Msa0076280 | AT1G23090.3 | 55.193 | 491 | 219 | 1 | 150 | 639 | 1 | 491 | 0.0 | 563 |
| Msa0076280 | AT1G23090.4 | 55.193 | 491 | 219 | 1 | 150 | 639 | 1 | 491 | 0.0 | 563 |
| Msa0076280 | AT1G77990.1 | 48.616 | 578 | 286 | 4 | 65 | 634 | 89 | 663 | 0.0 | 550 |
| Msa0076280 | AT1G78000.6 | 56.051 | 471 | 206 | 1 | 14 | 483 | 21 | 491 | 2.28e-176 | 512 |
| Msa0076280 | AT1G78000.7 | 53.933 | 445 | 204 | 1 | 129 | 572 | 1 | 445 | 9.02e-162 | 473 |
| Msa0076280 | AT3G12520.2 | 37.435 | 577 | 339 | 9 | 69 | 637 | 51 | 613 | 1.61e-126 | 389 |
| Msa0076280 | AT3G12520.1 | 37.435 | 577 | 339 | 9 | 69 | 637 | 67 | 629 | 3.03e-126 | 389 |
| Msa0076280 | AT5G13550.1 | 36.174 | 622 | 361 | 12 | 24 | 637 | 49 | 642 | 7.00e-125 | 385 |
| Msa0076280 | AT3G12520.3 | 39.085 | 481 | 276 | 7 | 69 | 544 | 67 | 535 | 6.52e-109 | 339 |
Find 160 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTGTATATTACAGAATT+TGG | 0.105263 | 1_2:-52261077 | None:intergenic |
| ACCCTCTGATTCATCTCTTT+TGG | 0.151425 | 1_2:-52261804 | None:intergenic |
| TTTCTTCCAACTTAGGAATT+AGG | 0.175398 | 1_2:-52262016 | None:intergenic |
| CTGGAACTGGAGAAAATTAA+AGG | 0.236064 | 1_2:+52262142 | Msa0076280:three_prime_UTR |
| TGGAGGAAGGTTGGCAAGTT+TGG | 0.241408 | 1_2:-52255319 | None:intergenic |
| GCCAACCTTCCTCCAATTCT+TGG | 0.242711 | 1_2:+52255327 | Msa0076280:CDS |
| CGTCTGCATTAGCGCATATA+TGG | 0.260758 | 1_2:+52260861 | Msa0076280:CDS |
| GCTTGGTGCCCATTCAAATA+TGG | 0.263411 | 1_2:-52255214 | None:intergenic |
| CCGAATGCAAATCGTGTTTC+CGG | 0.263737 | 1_2:+52261113 | Msa0076280:CDS |
| TTCTTCATCACCTCACTTCC+AGG | 0.268686 | 1_2:-52261680 | None:intergenic |
| GCCGTTGGCGTCCGTTATAC+TGG | 0.273981 | 1_2:+52258302 | Msa0076280:CDS |
| CTTGCATTGGCAAAGTAAAT+TGG | 0.276343 | 1_2:-52261161 | None:intergenic |
| AAGCTTCATTGGGTCTCTTT+AGG | 0.281055 | 1_2:+52256418 | Msa0076280:CDS |
| AAGGCCAAGGACATTTGTTT+TGG | 0.282863 | 1_2:+52261046 | Msa0076280:CDS |
| GTCTTTGGCAGTGTTGAAAT+TGG | 0.299924 | 1_2:+52260889 | Msa0076280:CDS |
| CAGCAGCTGAAATCAATTCT+AGG | 0.300141 | 1_2:+52257319 | Msa0076280:CDS |
| GTGATTGAGAATGAGGAGAT+AGG | 0.303308 | 1_2:-52254826 | None:intergenic |
| GCATATATGGGCGTTGTCTT+TGG | 0.305788 | 1_2:+52260874 | Msa0076280:CDS |
| AATTTCCTCCTACATCCTTT+TGG | 0.307255 | 1_2:-52261721 | None:intergenic |
| AAAAGGATGTAGGAGGAAAT+TGG | 0.320530 | 1_2:+52261723 | Msa0076280:CDS |
| AATGGCCTTTGAAAAGGTTC+TGG | 0.324930 | 1_2:+52262123 | Msa0076280:three_prime_UTR |
| CCTATGATTACAGCTTGTTT+TGG | 0.325648 | 1_2:+52261652 | Msa0076280:intron |
| CTGTCACATGCAGCCATAGT+AGG | 0.326137 | 1_2:+52257262 | Msa0076280:CDS |
| TTCACGGCCGAACGCGAAAA+TGG | 0.329931 | 1_2:-52260640 | None:intergenic |
| ATATATAGTTGAGAAGATTA+TGG | 0.332164 | 1_2:+52254987 | Msa0076280:exon |
| GATGGGTAGTTCAAGGGATT+TGG | 0.335800 | 1_2:+52256266 | Msa0076280:CDS |
| TTTACCATGAGAATTATAAA+TGG | 0.343114 | 1_2:+52262105 | Msa0076280:three_prime_UTR |
| TTCACAGCTACATTCTTTGC+TGG | 0.345288 | 1_2:+52256387 | Msa0076280:CDS |
| GAGCTATAATGCCAACAATA+AGG | 0.345823 | 1_2:-52259348 | None:intergenic |
| AACCTCCTCAATGGATCATC+TGG | 0.355664 | 1_2:-52255138 | None:intergenic |
| AAGCATTGCAGATACAATTA+TGG | 0.359813 | 1_2:-52260779 | None:intergenic |
| TTGATAGCTGTGGTCATATA+TGG | 0.367436 | 1_2:-52259319 | None:intergenic |
| CTATGATGATTACCCTTGTT+CGG | 0.380140 | 1_2:+52255020 | Msa0076280:CDS |
| TAGGAAATTTCTTCCAACTT+AGG | 0.380941 | 1_2:-52262023 | None:intergenic |
| CTATGGCTCAAAATATTTAG+TGG | 0.384617 | 1_2:-52261950 | None:intergenic |
| ACCGTTAATTTATGCAATGA+TGG | 0.385050 | 1_2:+52256248 | Msa0076280:CDS |
| TCCACCATCACTCACAGATT+TGG | 0.390915 | 1_2:+52259285 | Msa0076280:CDS |
| TATATAGTTGAGAAGATTAT+GGG | 0.392854 | 1_2:+52254988 | Msa0076280:exon |
| TATGATGATTACCCTTGTTC+GGG | 0.398340 | 1_2:+52255021 | Msa0076280:CDS |
| CTTTGAAAAGGTTCTGGAAC+TGG | 0.402147 | 1_2:+52262129 | Msa0076280:three_prime_UTR |
| CCCATCATTGCATAAATTAA+CGG | 0.402423 | 1_2:-52256249 | None:intergenic |
| AACTCACATAGTCCAAGAAT+TGG | 0.411726 | 1_2:-52255339 | None:intergenic |
| ACCTCTTGCTACCTCACAAC+TGG | 0.412059 | 1_2:+52260525 | Msa0076280:CDS |
| GAAGACAGAATTAAAGATAC+AGG | 0.413818 | 1_2:+52261328 | Msa0076280:CDS |
| TTTGGTTATTGCAGTGGAGG+TGG | 0.420288 | 1_2:+52257667 | Msa0076280:intron |
| TCCTCCCATGAACCCTACTA+TGG | 0.424696 | 1_2:-52257275 | None:intergenic |
| TTGCATCCTAATTCCTAAGT+TGG | 0.424756 | 1_2:+52262010 | Msa0076280:three_prime_UTR |
| ATTATAAATGGCCTTTGAAA+AGG | 0.428322 | 1_2:+52262117 | Msa0076280:three_prime_UTR |
| ATGACCACAGCTATCAAAAC+TGG | 0.429051 | 1_2:+52259325 | Msa0076280:CDS |
| GTCTGCATTAGCGCATATAT+GGG | 0.430147 | 1_2:+52260862 | Msa0076280:CDS |
| TGATTGAGAATGAGGAGATA+GGG | 0.430777 | 1_2:-52254825 | None:intergenic |
| CGTTATACTGGGAAGTGTGC+TGG | 0.431245 | 1_2:+52258314 | Msa0076280:CDS |
| ATCAAAACTGGCCTTATTGT+TGG | 0.431517 | 1_2:+52259337 | Msa0076280:CDS |
| AATCTTTAGAATTAGAATTC+CGG | 0.433702 | 1_2:-52261132 | None:intergenic |
| GGCAGTTGGATCTCTTCTGA+TGG | 0.434035 | 1_2:+52256302 | Msa0076280:CDS |
| TGCAGCCATAGTAGGGTTCA+TGG | 0.439490 | 1_2:+52257270 | Msa0076280:CDS |
| CTTGGTGCCCATTCAAATAT+GGG | 0.439545 | 1_2:-52255213 | None:intergenic |
| AACAAAGAGATGATAGCTAT+TGG | 0.443400 | 1_2:+52260477 | Msa0076280:CDS |
| TTTGTTCTATTACACTCCTC+TGG | 0.447769 | 1_2:+52260744 | Msa0076280:CDS |
| GAAAGAACCAACTATGTTCA+TGG | 0.448133 | 1_2:-52260502 | None:intergenic |
| AGTTCAAGGGATTTGGCAGT+TGG | 0.456451 | 1_2:+52256273 | Msa0076280:CDS |
| TTGGGTAGGATTAACCTCAT+TGG | 0.460340 | 1_2:-52256337 | None:intergenic |
| TGGCATCACTATTGCTAGCT+TGG | 0.462798 | 1_2:+52255272 | Msa0076280:CDS |
| CACTTGAACACCGTGGTGCT+CGG | 0.463889 | 1_2:-52258352 | None:intergenic |
| TCTTCTGATGGGTTCCATGT+TGG | 0.465867 | 1_2:+52256314 | Msa0076280:CDS |
| CCGGAAACACGATTTGCATT+CGG | 0.466507 | 1_2:-52261113 | None:intergenic |
| GCATCCAGCATTATAGTTCA+CGG | 0.466809 | 1_2:-52260656 | None:intergenic |
| TACTATTTGTTGCAAGGCCA+AGG | 0.467032 | 1_2:+52261033 | Msa0076280:CDS |
| ATTGGAACCATGAACATAGT+TGG | 0.470036 | 1_2:+52260495 | Msa0076280:CDS |
| ATGCAATGATGGGTAGTTCA+AGG | 0.474788 | 1_2:+52256259 | Msa0076280:CDS |
| AGGTGGGAAAGCGCTGTGTT+GGG | 0.476059 | 1_2:+52257684 | Msa0076280:CDS |
| CTCTCTTAAATAGCTTGCAT+TGG | 0.477563 | 1_2:-52261174 | None:intergenic |
| CAGATAGGAGAATTGAAGAA+AGG | 0.483632 | 1_2:+52259256 | Msa0076280:intron |
| TGATTCTTAAACCTCCTCAA+TGG | 0.483943 | 1_2:-52255147 | None:intergenic |
| ATGAAGCAGCCATCCATCTC+TGG | 0.484288 | 1_2:+52260815 | Msa0076280:CDS |
| ATTATTACTATTACAATATG+TGG | 0.484678 | 1_2:+52261906 | Msa0076280:three_prime_UTR |
| TTGGTTATTGCAGTGGAGGT+GGG | 0.486649 | 1_2:+52257668 | Msa0076280:intron |
| AGGTTGCAATATCAGTGCTT+CGG | 0.492752 | 1_2:+52261006 | Msa0076280:intron |
| CTACTATGGCTGCATGTGAC+AGG | 0.495854 | 1_2:-52257261 | None:intergenic |
| GCAGTTGGATCTCTTCTGAT+GGG | 0.498638 | 1_2:+52256303 | Msa0076280:CDS |
| AAGGCCATTTATAATTCTCA+TGG | 0.498646 | 1_2:-52262109 | None:intergenic |
| AAGAACTCAACAACTTATGT+AGG | 0.500061 | 1_2:-52262042 | None:intergenic |
| TTTCCCAAAACAAATGTCCT+TGG | 0.500266 | 1_2:-52261050 | None:intergenic |
| ATAATTGTATCTGCAATGCT+TGG | 0.501731 | 1_2:+52260781 | Msa0076280:CDS |
| CAACAAATCCAGCTTCCAAA+AGG | 0.505659 | 1_2:+52261706 | Msa0076280:CDS |
| GGTTGAAGTGATTGAGAATG+AGG | 0.511798 | 1_2:-52254833 | None:intergenic |
| TTGAAATCTGATCTCATAGC+TGG | 0.511965 | 1_2:+52255252 | Msa0076280:CDS |
| TGCAATGATGGGTAGTTCAA+GGG | 0.512364 | 1_2:+52256260 | Msa0076280:CDS |
| GCAGTTGGAACTGTGGCAGT+TGG | 0.515482 | 1_2:+52256288 | Msa0076280:CDS |
| CCGTTGGCGTCCGTTATACT+GGG | 0.520515 | 1_2:+52258303 | Msa0076280:CDS |
| ATTTGTCAATCTTCCAGAGA+TGG | 0.520606 | 1_2:-52260828 | None:intergenic |
| TGTTGGCATTATAGCTCTTG+CGG | 0.529365 | 1_2:+52259354 | Msa0076280:CDS |
| GAGGTGGGAAAGCGCTGTGT+TGG | 0.531070 | 1_2:+52257683 | Msa0076280:CDS |
| TCCAAGAATTGGAGGAAGGT+TGG | 0.531977 | 1_2:-52255328 | None:intergenic |
| TGTCACATGCAGCCATAGTA+GGG | 0.533525 | 1_2:+52257263 | Msa0076280:CDS |
| CCGTTAATTTATGCAATGAT+GGG | 0.538397 | 1_2:+52256249 | Msa0076280:CDS |
| TGCAATTGACATCACAATGT+TGG | 0.540759 | 1_2:-52260692 | None:intergenic |
| AAGAACTGAAAAGTGTAGCT+TGG | 0.541491 | 1_2:-52255231 | None:intergenic |
| GGTGTCAGCAATGACGCCGT+TGG | 0.542147 | 1_2:+52258287 | Msa0076280:CDS |
| CAGCACACTTCCCAGTATAA+CGG | 0.546747 | 1_2:-52258313 | None:intergenic |
| GGTTACTACTATTTGTTGCA+AGG | 0.547106 | 1_2:+52261027 | Msa0076280:CDS |
| TCACATAGTCCAAGAATTGG+AGG | 0.548928 | 1_2:-52255336 | None:intergenic |
| TCGGCCGTGAACTATAATGC+TGG | 0.554904 | 1_2:+52260652 | Msa0076280:CDS |
| AAAGAGATGAATCAGAGGGT+TGG | 0.561882 | 1_2:+52261807 | Msa0076280:CDS |
| ATTAACCTCATTGGCCAACA+TGG | 0.564213 | 1_2:-52256328 | None:intergenic |
| GCAGCCATAGTAGGGTTCAT+GGG | 0.565129 | 1_2:+52257271 | Msa0076280:CDS |
| ACCAAATCTGTGAGTGATGG+TGG | 0.568879 | 1_2:-52259286 | None:intergenic |
| TCTTTCCAGATGATCCATTG+AGG | 0.569076 | 1_2:+52255133 | Msa0076280:CDS |
| TGTTGAGAGTTGAGACACTT+AGG | 0.574813 | 1_2:-52254762 | None:intergenic |
| TCAACGTTCATACCCGAACA+AGG | 0.579824 | 1_2:-52255033 | None:intergenic |
| CTCAAGGTGGATCGATGAAG+AGG | 0.580742 | 1_2:+52261306 | Msa0076280:CDS |
| AAACACCTTGCTTATGCATG+TGG | 0.583289 | 1_2:+52254899 | Msa0076280:five_prime_UTR |
| TTATTGTTCATAGGATCTCA+AGG | 0.585365 | 1_2:+52261290 | Msa0076280:intron |
| CGGATACGATATCAGCAGCA+TGG | 0.585791 | 1_2:-52257357 | None:intergenic |
| GGATACGATATCAGCAGCAT+GGG | 0.586482 | 1_2:-52257356 | None:intergenic |
| GCTAGCTTGGCTATTCCTCA+AGG | 0.586902 | 1_2:+52255285 | Msa0076280:CDS |
| GTCAATCTTCCAGAGATGGA+TGG | 0.590877 | 1_2:-52260824 | None:intergenic |
| GGGTTCCATGTTGGCCAATG+AGG | 0.591059 | 1_2:+52256323 | Msa0076280:CDS |
| GTTCTATTACACTCCTCTGG+TGG | 0.592713 | 1_2:+52260747 | Msa0076280:CDS |
| TTCCAGATGATCCATTGAGG+AGG | 0.598956 | 1_2:+52255136 | Msa0076280:CDS |
| TTTCAGGAAGGAATAGCTGT+GGG | 0.600243 | 1_2:+52260414 | Msa0076280:intron |
| CGAGCACCACGGTGTTCAAG+TGG | 0.600656 | 1_2:+52258353 | Msa0076280:CDS |
| GTTGGAAATATTGATACGAG+TGG | 0.602932 | 1_2:+52261480 | Msa0076280:CDS |
| AGAATGTAGCTGTGAAAGCA+AGG | 0.605756 | 1_2:-52256380 | None:intergenic |
| GGATTTGGCAGTTGGAACTG+TGG | 0.605836 | 1_2:+52256281 | Msa0076280:CDS |
| AAGACAGAATTAAAGATACA+GGG | 0.609710 | 1_2:+52261329 | Msa0076280:CDS |
| TCCAGCTTCCAAAAGGATGT+AGG | 0.611724 | 1_2:+52261713 | Msa0076280:CDS |
| TCCCAAAAGAGATGAATCAG+AGG | 0.611733 | 1_2:+52261802 | Msa0076280:CDS |
| ACCAGTTGTGAGGTAGCAAG+AGG | 0.613006 | 1_2:-52260526 | None:intergenic |
| CCCAGTATAACGGACGCCAA+CGG | 0.613528 | 1_2:-52258303 | None:intergenic |
| ATGCAAGCTATTTAAGAGAG+AGG | 0.614022 | 1_2:+52261177 | Msa0076280:CDS |
| GTGCAGGTTAGGGTTTATCG+TGG | 0.617383 | 1_2:+52257234 | Msa0076280:intron |
| GCTAGTGAAAATGATGAGGA+TGG | 0.624427 | 1_2:-52254785 | None:intergenic |
| AGCTTCCAAAAGGATGTAGG+AGG | 0.626533 | 1_2:+52261716 | Msa0076280:CDS |
| AGAAGCTAGTGAAAATGATG+AGG | 0.627907 | 1_2:-52254789 | None:intergenic |
| CATGGGAGGAGCAGCTACAG+TGG | 0.630489 | 1_2:+52257288 | Msa0076280:CDS |
| CCCAAAAGAGATGAATCAGA+GGG | 0.633313 | 1_2:+52261803 | Msa0076280:CDS |
| TTGGCATAGCTAATGCCTTG+AGG | 0.644841 | 1_2:-52255300 | None:intergenic |
| ATAGTCCAAGAATTGGAGGA+AGG | 0.645921 | 1_2:-52255332 | None:intergenic |
| AAGTTCCACATGCATAAGCA+AGG | 0.648713 | 1_2:-52254904 | None:intergenic |
| TTTGGTCAATCCTGGAAGTG+AGG | 0.652558 | 1_2:+52261670 | Msa0076280:CDS |
| GATGATGTTTACCAGTTGTG+AGG | 0.653692 | 1_2:-52260536 | None:intergenic |
| AACGTTGATGAGAGTGTGCA+TGG | 0.657132 | 1_2:+52255048 | Msa0076280:CDS |
| TTGGTGCCCATTCAAATATG+GGG | 0.657181 | 1_2:-52255212 | None:intergenic |
| AGACAGAATTAAAGATACAG+GGG | 0.658453 | 1_2:+52261330 | Msa0076280:CDS |
| TTCACTCACGCCGAGCACCA+CGG | 0.668149 | 1_2:+52258342 | Msa0076280:CDS |
| AGAGGAGTGTAATAGAACAA+AGG | 0.670114 | 1_2:-52260742 | None:intergenic |
| AATACCAAATCTGTGAGTGA+TGG | 0.675598 | 1_2:-52259289 | None:intergenic |
| TTACGAAGTATCTTGTAACA+AGG | 0.677468 | 1_2:-52257728 | None:intergenic |
| ATCATTGCATAAATTAACGG+TGG | 0.681126 | 1_2:-52256246 | None:intergenic |
| GCCATAGTAGGGTTCATGGG+AGG | 0.684143 | 1_2:+52257274 | Msa0076280:CDS |
| TGATGAGAGTGTGCATGGTG+TGG | 0.685946 | 1_2:+52255053 | Msa0076280:CDS |
| CAACGTTCATACCCGAACAA+GGG | 0.694687 | 1_2:-52255032 | None:intergenic |
| TATGTTATACTGGATATGAG+TGG | 0.705748 | 1_2:+52261367 | Msa0076280:CDS |
| AAATTGGATCTATCTGACAG+TGG | 0.706142 | 1_2:+52261739 | Msa0076280:CDS |
| ATGGCTGCTAGTACCACCAG+AGG | 0.717575 | 1_2:-52260760 | None:intergenic |
| ATGTAGCTGTGAAAGCAAGG+TGG | 0.720087 | 1_2:-52256377 | None:intergenic |
| TGCAGAGCAAGAAACAACCG+AGG | 0.739760 | 1_2:+52258256 | Msa0076280:intron |
| TTGTTCATAGGATCTCAAGG+TGG | 0.742236 | 1_2:+52261293 | Msa0076280:intron |
| TGCTCACCACTTGAACACCG+TGG | 0.755603 | 1_2:-52258359 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAATTAACAATAAAAAAAA+CGG | - | chr1_2:52254857-52254876 | None:intergenic | 10.0% |
| !!! | ATAAATATATACCATTTTTT+TGG | + | chr1_2:52255394-52255413 | Msa0076280:intron | 10.0% |
| !!! | TAAGTAAAAATAATAGTTTT+TGG | - | chr1_2:52255663-52255682 | None:intergenic | 10.0% |
| !!! | ACTAGTTTATATATTTTTTT+GGG | + | chr1_2:52255950-52255969 | Msa0076280:intron | 10.0% |
| !!! | AAATATATTATTTTGCTAAT+TGG | - | chr1_2:52256015-52256034 | None:intergenic | 10.0% |
| !! | TAAATAAAATAATAGCAATA+TGG | + | chr1_2:52256560-52256579 | Msa0076280:intron | 10.0% |
| !! | AAATAAAATAATAGCAATAT+GGG | + | chr1_2:52256561-52256580 | Msa0076280:intron | 10.0% |
| !! | TAATAATGTAATAGTAATAT+GGG | - | chr1_2:52256705-52256724 | None:intergenic | 10.0% |
| !! | AATTAAATTATTCTGAATTA+AGG | + | chr1_2:52256733-52256752 | Msa0076280:intron | 10.0% |
| !! | TTAACAAAAAAATAAATACT+TGG | + | chr1_2:52256772-52256791 | Msa0076280:intron | 10.0% |
| !! | TATGTTTGTTTATATAAAAT+AGG | - | chr1_2:52257568-52257587 | None:intergenic | 10.0% |
| !!! | AAATTAATTTAACTTGAAAT+TGG | + | chr1_2:52258198-52258217 | Msa0076280:intron | 10.0% |
| !! | TTCTTTCAAAAAAAAAAAAA+AGG | + | chr1_2:52259928-52259947 | Msa0076280:intron | 10.0% |
| !!! | ATTAATAGTTATTTTACAAT+CGG | + | chr1_2:52260143-52260162 | Msa0076280:intron | 10.0% |
| !! | TATAAAAATTATCATATTGA+TGG | + | chr1_2:52260453-52260472 | Msa0076280:CDS | 10.0% |
| !! | AATAAGCTATAAAAAATATT+TGG | - | chr1_2:52261594-52261613 | None:intergenic | 10.0% |
| !! | ATTTAGTAAAACCAAAAAAA+TGG | - | chr1_2:52255408-52255427 | None:intergenic | 15.0% |
| !!! | TAGCAACAAAATATTTTTTA+TGG | - | chr1_2:52255906-52255925 | None:intergenic | 15.0% |
| !!! | GACTAGTTTATATATTTTTT+TGG | + | chr1_2:52255949-52255968 | Msa0076280:intron | 15.0% |
| !! | GTAATAATGTAATAGTAATA+TGG | - | chr1_2:52256706-52256725 | None:intergenic | 15.0% |
| !! | ATCAATAATATTTAAGGAAA+GGG | - | chr1_2:52257174-52257193 | None:intergenic | 15.0% |
| !! | TAGATGTTTATAGAAATTAT+GGG | + | chr1_2:52257961-52257980 | Msa0076280:intron | 15.0% |
| !! | CACATAAAAATTAATCTAAT+CGG | - | chr1_2:52258387-52258406 | None:intergenic | 15.0% |
| !!! | TCTTTTAAATGTAAATAAAG+AGG | - | chr1_2:52259781-52259800 | None:intergenic | 15.0% |
| !!! | CAAAAAAAAAAAAAAGGTTT+TGG | + | chr1_2:52259934-52259953 | Msa0076280:intron | 15.0% |
| !! | TTTAAAAAAAGAGTAGTATA+AGG | - | chr1_2:52260046-52260065 | None:intergenic | 15.0% |
| !!! | ACTCTTTTTTTAAAAAGAAA+TGG | + | chr1_2:52260052-52260071 | Msa0076280:intron | 15.0% |
| !!! | CTCTTTTTTTAAAAAGAAAT+GGG | + | chr1_2:52260053-52260072 | Msa0076280:intron | 15.0% |
| !!! | TAACTATTAATTATTTCTCT+TGG | - | chr1_2:52260134-52260153 | None:intergenic | 15.0% |
| !!! | ATACTTTTAAATCTATGAAA+TGG | + | chr1_2:52260281-52260300 | Msa0076280:intron | 15.0% |
| !! | TATTACATATGACATTTAAT+TGG | - | chr1_2:52260326-52260345 | None:intergenic | 15.0% |
| !!! | AATTTTGAATTATGTTATAC+TGG | + | chr1_2:52261357-52261376 | Msa0076280:CDS | 15.0% |
| !! | ATTATTACTATTACAATATG+TGG | + | chr1_2:52261906-52261925 | Msa0076280:three_prime_UTR | 15.0% |
| !! | ATATATAGTTGAGAAGATTA+TGG | + | chr1_2:52254987-52255006 | Msa0076280:exon | 20.0% |
| !! | TATATAGTTGAGAAGATTAT+GGG | + | chr1_2:52254988-52255007 | Msa0076280:exon | 20.0% |
| !!! | TTGGTTTTACTAAATGAAAT+AGG | + | chr1_2:52255413-52255432 | Msa0076280:intron | 20.0% |
| !!! | ATATTTCTTTTTAACTCGTT+TGG | + | chr1_2:52255700-52255719 | Msa0076280:intron | 20.0% |
| !!! | TTATTTTGCTAATTGGTAAT+TGG | - | chr1_2:52256008-52256027 | None:intergenic | 20.0% |
| !!! | TAATTAGCAAGAAAAGTATA+TGG | - | chr1_2:52256129-52256148 | None:intergenic | 20.0% |
| !!! | CAATTAAATTTGTTATTTGC+CGG | + | chr1_2:52257051-52257070 | Msa0076280:intron | 20.0% |
| !! | CATCAATAATATTTAAGGAA+AGG | - | chr1_2:52257175-52257194 | None:intergenic | 20.0% |
| !! | CTAGATGTTTATAGAAATTA+TGG | + | chr1_2:52257960-52257979 | Msa0076280:intron | 20.0% |
| !!! | GATTAATTTTTATGTGTTGA+CGG | + | chr1_2:52258391-52258410 | Msa0076280:intron | 20.0% |
| !! | GTTTGCATATAAATATTTAC+AGG | - | chr1_2:52258477-52258496 | None:intergenic | 20.0% |
| !!! | TAATTTTTTACTTTCCTTCA+AGG | + | chr1_2:52258710-52258729 | Msa0076280:intron | 20.0% |
| !! | TAAGAATACTCATTGAATAT+GGG | - | chr1_2:52258877-52258896 | None:intergenic | 20.0% |
| !! | ATAAGAATACTCATTGAATA+TGG | - | chr1_2:52258878-52258897 | None:intergenic | 20.0% |
| !! | TTATCTTATATACATGACAT+TGG | + | chr1_2:52259148-52259167 | Msa0076280:intron | 20.0% |
| !!! | TATCATATTACTACTTTTGT+TGG | + | chr1_2:52259181-52259200 | Msa0076280:intron | 20.0% |
| !!! | ATGTCTAAAAGTGTATTATT+AGG | - | chr1_2:52259420-52259439 | None:intergenic | 20.0% |
| !!! | TAATAATACACTTTTAGACA+TGG | + | chr1_2:52259419-52259438 | Msa0076280:intron | 20.0% |
| !! | GTCATTAAATACAAAACAAT+AGG | + | chr1_2:52259896-52259915 | Msa0076280:intron | 20.0% |
| !! | TGCATATATATGAAAGTTAT+TGG | + | chr1_2:52259957-52259976 | Msa0076280:intron | 20.0% |
| !! | ATTCTTCTAATTATATCATG+AGG | + | chr1_2:52260258-52260277 | Msa0076280:intron | 20.0% |
| !! | TTAACTAAATTAGCATATCT+AGG | - | chr1_2:52260357-52260376 | None:intergenic | 20.0% |
| !! | TAGTTAATGTAGATTTCAAT+AGG | + | chr1_2:52260370-52260389 | Msa0076280:intron | 20.0% |
| !! | ATAAAAATGATAACTCTTTC+AGG | + | chr1_2:52260616-52260635 | Msa0076280:intron | 20.0% |
| !! | TAAAAATGATAACTCTTTCA+GGG | + | chr1_2:52260617-52260636 | Msa0076280:intron | 20.0% |
| !!! | TAATGTGTTTTCTTATGTTT+AGG | + | chr1_2:52260986-52261005 | Msa0076280:intron | 20.0% |
| !! | TTTCTGTATATTACAGAATT+TGG | - | chr1_2:52261080-52261099 | None:intergenic | 20.0% |
| !!! | AATCTTTAGAATTAGAATTC+CGG | - | chr1_2:52261135-52261154 | None:intergenic | 20.0% |
| !! | ATAGGAATGAAAAGATTTAA+AGG | - | chr1_2:52261637-52261656 | None:intergenic | 20.0% |
| !! | TTTACCATGAGAATTATAAA+TGG | + | chr1_2:52262105-52262124 | Msa0076280:three_prime_UTR | 20.0% |
| ! | TACTTCATAGACTTCAAAAA+TGG | - | chr1_2:52255096-52255115 | None:intergenic | 25.0% |
| !!! | ATTTTTTCCCCATATTTGAA+TGG | + | chr1_2:52255205-52255224 | Msa0076280:CDS | 25.0% |
| !!! | TTTTTTCCCCATATTTGAAT+GGG | + | chr1_2:52255206-52255225 | Msa0076280:CDS | 25.0% |
| !! | ATGTGTTTTCAAATTCAAAC+TGG | + | chr1_2:52255459-52255478 | Msa0076280:intron | 25.0% |
| ! | ATTCAAACTGGACATTAAAT+CGG | + | chr1_2:52255471-52255490 | Msa0076280:intron | 25.0% |
| !! | TTAGTCAGTCCTAAAATTTT+TGG | - | chr1_2:52255843-52255862 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGGGACATTGATA+TGG | + | chr1_2:52255962-52255981 | Msa0076280:intron | 25.0% |
| !! | GAAAAGTATATGGAAGAAAA+TGG | - | chr1_2:52256119-52256138 | None:intergenic | 25.0% |
| ! | ATGATATGTTAGTATGTTAC+TGG | + | chr1_2:52256526-52256545 | Msa0076280:intron | 25.0% |
| ! | ATAATAGCAATATGGGAAAA+AGG | + | chr1_2:52256568-52256587 | Msa0076280:intron | 25.0% |
| ! | AGAATATATATATCCTAACC+AGG | + | chr1_2:52256593-52256612 | Msa0076280:intron | 25.0% |
| ! | CGGCAAATAACAAATTTAAT+TGG | - | chr1_2:52257053-52257072 | None:intergenic | 25.0% |
| ! | CCATGCATCAATAATATTTA+AGG | - | chr1_2:52257180-52257199 | None:intergenic | 25.0% |
| ! | CCTTAAATATTATTGATGCA+TGG | + | chr1_2:52257177-52257196 | Msa0076280:intron | 25.0% |
| ! | TATTTATTTGGTTATTGCAG+TGG | + | chr1_2:52257661-52257680 | Msa0076280:intron | 25.0% |
| ! | ATTACCTAACACATATTCAT+TGG | + | chr1_2:52257753-52257772 | Msa0076280:intron | 25.0% |
| ! | CTAGCATAATAATTAATGCA+AGG | - | chr1_2:52257939-52257958 | None:intergenic | 25.0% |
| ! | TTTATATGCAAACAACAAGT+TGG | + | chr1_2:52258484-52258503 | Msa0076280:intron | 25.0% |
| !!! | ACAAGTTGGTTTGATTTAAT+CGG | + | chr1_2:52258498-52258517 | Msa0076280:intron | 25.0% |
| ! | ATTCAATGAGTATTCTTATC+TGG | + | chr1_2:52258879-52258898 | Msa0076280:intron | 25.0% |
| ! | TAGAAAAATGATTCATTTGC+AGG | - | chr1_2:52258910-52258929 | None:intergenic | 25.0% |
| ! | AGTGTATTATTAGGCAATAA+AGG | - | chr1_2:52259411-52259430 | None:intergenic | 25.0% |
| ! | TTCATTCTTCTTTGGTTATA+AGG | - | chr1_2:52259521-52259540 | None:intergenic | 25.0% |
| ! | AGTTTCATTTCATTCTTCTT+TGG | - | chr1_2:52259529-52259548 | None:intergenic | 25.0% |
| ! | TGAGGCAATAACTTTATTAT+TGG | + | chr1_2:52259560-52259579 | Msa0076280:intron | 25.0% |
| ! | ATCGAAATAATTGTCAAATG+AGG | - | chr1_2:52259633-52259652 | None:intergenic | 25.0% |
| ! | TATATGAAAGTTATTGGTAG+TGG | + | chr1_2:52259963-52259982 | Msa0076280:intron | 25.0% |
| !!! | ACTAATGATTATTTTAGAGC+CGG | + | chr1_2:52260106-52260125 | Msa0076280:intron | 25.0% |
| !! | TTAATTATTTCTCTTGGAAC+CGG | - | chr1_2:52260128-52260147 | None:intergenic | 25.0% |
| ! | GATGAAATTCAAATTCTTGT+AGG | - | chr1_2:52260170-52260189 | None:intergenic | 25.0% |
| ! | AATGTGATAAGTATTCCATA+AGG | - | chr1_2:52260234-52260253 | None:intergenic | 25.0% |
| ! | ATGACATTTAATTGGAAGAA+AGG | - | chr1_2:52260318-52260337 | None:intergenic | 25.0% |
| ! | GTAATACTGATGTTAAGATT+TGG | - | chr1_2:52260563-52260582 | None:intergenic | 25.0% |
| !! | AAGGAAAAAAGCAAATTTTC+AGG | - | chr1_2:52261210-52261229 | None:intergenic | 25.0% |
| ! | AAGACAGAATTAAAGATACA+GGG | + | chr1_2:52261329-52261348 | Msa0076280:CDS | 25.0% |
| ! | TATGGCAATTAATCAAAACA+TGG | + | chr1_2:52261410-52261429 | Msa0076280:intron | 25.0% |
| !! | AACTTGCAGTGTAATTTTAT+TGG | + | chr1_2:52261452-52261471 | Msa0076280:intron | 25.0% |
| !! | ATACATCTTTCATTTTCCTA+TGG | - | chr1_2:52261970-52261989 | None:intergenic | 25.0% |
| !! | ATTATAAATGGCCTTTGAAA+AGG | + | chr1_2:52262117-52262136 | Msa0076280:three_prime_UTR | 25.0% |
| ATAGACTTCAAAAATGGTTG+AGG | - | chr1_2:52255090-52255109 | None:intergenic | 30.0% | |
| TTGAATTGTGACTAGATGAA+TGG | - | chr1_2:52255577-52255596 | None:intergenic | 30.0% | |
| !!! | TTGGTATAGACTCTTTTTTG+AGG | - | chr1_2:52255989-52256008 | None:intergenic | 30.0% |
| ATCATTGCATAAATTAACGG+TGG | - | chr1_2:52256249-52256268 | None:intergenic | 30.0% | |
| ACCGTTAATTTATGCAATGA+TGG | + | chr1_2:52256248-52256267 | Msa0076280:CDS | 30.0% | |
| CCCATCATTGCATAAATTAA+CGG | - | chr1_2:52256252-52256271 | None:intergenic | 30.0% | |
| CCGTTAATTTATGCAATGAT+GGG | + | chr1_2:52256249-52256268 | Msa0076280:CDS | 30.0% | |
| ! | GAGAAAAAGCTTAGGATTTT+GGG | - | chr1_2:52256358-52256377 | None:intergenic | 30.0% |
| TGTTAGTATGTTACTGGATA+TGG | + | chr1_2:52256532-52256551 | Msa0076280:intron | 30.0% | |
| ACAAGACAACACAAAAAGAA+GGG | - | chr1_2:52256631-52256650 | None:intergenic | 30.0% | |
| TCTGAATTAAGGCATATACT+TGG | + | chr1_2:52256744-52256763 | Msa0076280:intron | 30.0% | |
| ! | ATTCTTTTAGCAAGTGTGAT+TGG | + | chr1_2:52256903-52256922 | Msa0076280:intron | 30.0% |
| ATAAATAGCAACGTTCGAAA+GGG | - | chr1_2:52256988-52257007 | None:intergenic | 30.0% | |
| ACAAGTTATAATAACGCATG+AGG | + | chr1_2:52257207-52257226 | Msa0076280:intron | 30.0% | |
| ! | TTTTTCTACCTGATGAGTTT+GGG | - | chr1_2:52257401-52257420 | None:intergenic | 30.0% |
| TAAAATAGGTTTGACTAAGC+CGG | - | chr1_2:52257554-52257573 | None:intergenic | 30.0% | |
| ! | TTACGAAGTATCTTGTAACA+AGG | - | chr1_2:52257731-52257750 | None:intergenic | 30.0% |
| TATGCCAATGAATATGTGTT+AGG | - | chr1_2:52257760-52257779 | None:intergenic | 30.0% | |
| ! | CTTGCTGTGTAAATATCATT+TGG | - | chr1_2:52257863-52257882 | None:intergenic | 30.0% |
| GAGAAATAAGTGACAGATTT+GGG | - | chr1_2:52257917-52257936 | None:intergenic | 30.0% | |
| ! | AAGTCAACAAATTTTCTCAG+CGG | + | chr1_2:52258055-52258074 | Msa0076280:intron | 30.0% |
| AATGAGTATTCTTATCTGGT+AGG | + | chr1_2:52258883-52258902 | Msa0076280:intron | 30.0% | |
| CTTATATACATGACATTGGA+AGG | + | chr1_2:52259152-52259171 | Msa0076280:intron | 30.0% | |
| TGGTATTGTAATTGCCAAAT+TGG | + | chr1_2:52259224-52259243 | Msa0076280:intron | 30.0% | |
| !! | ATAAAAGAGTTTGAGTTGAG+AGG | - | chr1_2:52259386-52259405 | None:intergenic | 30.0% |
| GAATGAAATGAAACTAGACA+AGG | + | chr1_2:52259534-52259553 | Msa0076280:intron | 30.0% | |
| GGCAATAACTTTATTATTGG+TGG | + | chr1_2:52259563-52259582 | Msa0076280:intron | 30.0% | |
| TTTGTCAAATGCTCATCATA+TGG | + | chr1_2:52259597-52259616 | Msa0076280:intron | 30.0% | |
| GAAATAATTGTCAAATGAGG+AGG | - | chr1_2:52259630-52259649 | None:intergenic | 30.0% | |
| !! | AGATAATGCTCTAGAACTAT+TGG | - | chr1_2:52259721-52259740 | None:intergenic | 30.0% |
| TTATGACCTCATATAAACCT+TGG | - | chr1_2:52259849-52259868 | None:intergenic | 30.0% | |
| AAATCTTGTAGTAACAGCTA+TGG | - | chr1_2:52260007-52260026 | None:intergenic | 30.0% | |
| TTTCATCTCTTGAGATTACA+AGG | + | chr1_2:52260183-52260202 | Msa0076280:intron | 30.0% | |
| TTCAATAGGATCTTGAATGT+TGG | + | chr1_2:52260384-52260403 | Msa0076280:intron | 30.0% | |
| AACAAAGAGATGATAGCTAT+TGG | + | chr1_2:52260477-52260496 | Msa0076280:CDS | 30.0% | |
| ! | AAGCATTGCAGATACAATTA+TGG | - | chr1_2:52260782-52260801 | None:intergenic | 30.0% |
| ATAATTGTATCTGCAATGCT+TGG | + | chr1_2:52260781-52260800 | Msa0076280:CDS | 30.0% | |
| AGGAAACTGTTATTGTTCAT+AGG | + | chr1_2:52261281-52261300 | Msa0076280:intron | 30.0% | |
| TTATTGTTCATAGGATCTCA+AGG | + | chr1_2:52261290-52261309 | Msa0076280:intron | 30.0% | |
| GAAGACAGAATTAAAGATAC+AGG | + | chr1_2:52261328-52261347 | Msa0076280:CDS | 30.0% | |
| AGACAGAATTAAAGATACAG+GGG | + | chr1_2:52261330-52261349 | Msa0076280:CDS | 30.0% | |
| TATGTTATACTGGATATGAG+TGG | + | chr1_2:52261367-52261386 | Msa0076280:CDS | 30.0% | |
| GATTAATTGCCATATCTCAA+AGG | - | chr1_2:52261404-52261423 | None:intergenic | 30.0% | |
| CTATGGCTCAAAATATTTAG+TGG | - | chr1_2:52261953-52261972 | None:intergenic | 30.0% | |
| !! | CACTAAATATTTTGAGCCAT+AGG | + | chr1_2:52261951-52261970 | Msa0076280:three_prime_UTR | 30.0% |
| TTTCTTCCAACTTAGGAATT+AGG | - | chr1_2:52262019-52262038 | None:intergenic | 30.0% | |
| TAGGAAATTTCTTCCAACTT+AGG | - | chr1_2:52262026-52262045 | None:intergenic | 30.0% | |
| AAGAACTCAACAACTTATGT+AGG | - | chr1_2:52262045-52262064 | None:intergenic | 30.0% | |
| AAGGCCATTTATAATTCTCA+TGG | - | chr1_2:52262112-52262131 | None:intergenic | 30.0% | |
| AGAAGCTAGTGAAAATGATG+AGG | - | chr1_2:52254792-52254811 | None:intergenic | 35.0% | |
| TGATTGAGAATGAGGAGATA+GGG | - | chr1_2:52254828-52254847 | None:intergenic | 35.0% | |
| CTATGATGATTACCCTTGTT+CGG | + | chr1_2:52255020-52255039 | Msa0076280:CDS | 35.0% | |
| TATGATGATTACCCTTGTTC+GGG | + | chr1_2:52255021-52255040 | Msa0076280:CDS | 35.0% | |
| TGATTCTTAAACCTCCTCAA+TGG | - | chr1_2:52255150-52255169 | None:intergenic | 35.0% | |
| ! | TCAACCAGCTTCTAAAAAGT+TGG | + | chr1_2:52255167-52255186 | Msa0076280:CDS | 35.0% |
| ! | AAGAACTGAAAAGTGTAGCT+TGG | - | chr1_2:52255234-52255253 | None:intergenic | 35.0% |
| TTGAAATCTGATCTCATAGC+TGG | + | chr1_2:52255252-52255271 | Msa0076280:CDS | 35.0% | |
| AACTCACATAGTCCAAGAAT+TGG | - | chr1_2:52255342-52255361 | None:intergenic | 35.0% | |
| ATTCAACTATAGTAAGCCTC+AGG | + | chr1_2:52255591-52255610 | Msa0076280:intron | 35.0% | |
| TTCAACTATAGTAAGCCTCA+GGG | + | chr1_2:52255592-52255611 | Msa0076280:intron | 35.0% | |
| !! | ACAACTTTATTGATTCGTCC+CGG | + | chr1_2:52255814-52255833 | Msa0076280:intron | 35.0% |
| !! | AAAAGCTTAGGATTTTGGGT+AGG | - | chr1_2:52256354-52256373 | None:intergenic | 35.0% |
| ! | GGAGAAAAAGCTTAGGATTT+TGG | - | chr1_2:52256359-52256378 | None:intergenic | 35.0% |
| CACAAGACAACACAAAAAGA+AGG | - | chr1_2:52256632-52256651 | None:intergenic | 35.0% | |
| TAGTAATATGGGATGCGAAA+TGG | - | chr1_2:52256694-52256713 | None:intergenic | 35.0% | |
| GATAAATAGCAACGTTCGAA+AGG | - | chr1_2:52256989-52257008 | None:intergenic | 35.0% | |
| !! | TTGTTATTTGCCGGAAATCA+AGG | + | chr1_2:52257060-52257079 | Msa0076280:intron | 35.0% |
| ! | TGTTATTTGCCGGAAATCAA+GGG | + | chr1_2:52257061-52257080 | Msa0076280:intron | 35.0% |
| ! | GAGGTAATGGTGTGTAATTA+AGG | + | chr1_2:52257083-52257102 | Msa0076280:intron | 35.0% |
| AGTTATAATAACGCATGAGG+TGG | + | chr1_2:52257210-52257229 | Msa0076280:intron | 35.0% | |
| GTTATAATAACGCATGAGGT+GGG | + | chr1_2:52257211-52257230 | Msa0076280:intron | 35.0% | |
| TTATAATAACGCATGAGGTG+GGG | + | chr1_2:52257212-52257231 | Msa0076280:intron | 35.0% | |
| CTGATGAGTTTGGGTAAAAA+TGG | - | chr1_2:52257392-52257411 | None:intergenic | 35.0% | |
| ! | CATTTTTACCCAAACTCATC+AGG | + | chr1_2:52257390-52257409 | Msa0076280:CDS | 35.0% |
| ! | GTTTTTCTACCTGATGAGTT+TGG | - | chr1_2:52257402-52257421 | None:intergenic | 35.0% |
| ! | TCAAACCTATTTCTCTAGAG+CGG | + | chr1_2:52257464-52257483 | Msa0076280:intron | 35.0% |
| ! | CTCTTCAACTTTGAGAAACT+TGG | - | chr1_2:52257499-52257518 | None:intergenic | 35.0% |
| TTATTTGGTTATTGCAGTGG+AGG | + | chr1_2:52257664-52257683 | Msa0076280:intron | 35.0% | |
| GGAGAAATAAGTGACAGATT+TGG | - | chr1_2:52257918-52257937 | None:intergenic | 35.0% | |
| ACTTGAAATTGGAACTGCAA+CGG | + | chr1_2:52258209-52258228 | Msa0076280:intron | 35.0% | |
| !!! | AGAAACAACCGAGGTTTTTT+TGG | + | chr1_2:52258265-52258284 | Msa0076280:CDS | 35.0% |
| !!! | GAAACAACCGAGGTTTTTTT+GGG | + | chr1_2:52258266-52258285 | Msa0076280:CDS | 35.0% |
| CATGATTAGATCATCCTTGA+AGG | - | chr1_2:52258727-52258746 | None:intergenic | 35.0% | |
| AAACACTGTTGAGTGCTATA+GGG | + | chr1_2:52258836-52258855 | Msa0076280:intron | 35.0% | |
| CATTGAATATGGGTGGTATT+CGG | - | chr1_2:52258867-52258886 | None:intergenic | 35.0% | |
| GAATACTCATTGAATATGGG+TGG | - | chr1_2:52258874-52258893 | None:intergenic | 35.0% | |
| ACATGTAACATGTGTACTCA+TGG | - | chr1_2:52258940-52258959 | None:intergenic | 35.0% | |
| ! | ATCTGAAACATGTGCCAATT+TGG | - | chr1_2:52259241-52259260 | None:intergenic | 35.0% |
| AATTGGCACATGTTTCAGAT+AGG | + | chr1_2:52259241-52259260 | Msa0076280:intron | 35.0% | |
| CAGATAGGAGAATTGAAGAA+AGG | + | chr1_2:52259256-52259275 | Msa0076280:intron | 35.0% | |
| AATACCAAATCTGTGAGTGA+TGG | - | chr1_2:52259292-52259311 | None:intergenic | 35.0% | |
| ! | TTGATAGCTGTGGTCATATA+TGG | - | chr1_2:52259322-52259341 | None:intergenic | 35.0% |
| !! | ATCAAAACTGGCCTTATTGT+TGG | + | chr1_2:52259337-52259356 | Msa0076280:CDS | 35.0% |
| GAGCTATAATGCCAACAATA+AGG | - | chr1_2:52259351-52259370 | None:intergenic | 35.0% | |
| AAATGCTCATCATATGGACA+TGG | + | chr1_2:52259603-52259622 | Msa0076280:intron | 35.0% | |
| !! | TGCTCTAGAACTATTGGTAA+AGG | - | chr1_2:52259715-52259734 | None:intergenic | 35.0% |
| ATCATTTAGCTGACACCTTA+TGG | + | chr1_2:52260216-52260235 | Msa0076280:intron | 35.0% | |
| ATTGGAACCATGAACATAGT+TGG | + | chr1_2:52260495-52260514 | Msa0076280:CDS | 35.0% | |
| GAAAGAACCAACTATGTTCA+TGG | - | chr1_2:52260505-52260524 | None:intergenic | 35.0% | |
| TGCAATTGACATCACAATGT+TGG | - | chr1_2:52260695-52260714 | None:intergenic | 35.0% | |
| ! | AGAGGAGTGTAATAGAACAA+AGG | - | chr1_2:52260745-52260764 | None:intergenic | 35.0% |
| TTTGTTCTATTACACTCCTC+TGG | + | chr1_2:52260744-52260763 | Msa0076280:CDS | 35.0% | |
| ATTTGTCAATCTTCCAGAGA+TGG | - | chr1_2:52260831-52260850 | None:intergenic | 35.0% | |
| TATATACCAGACTGAGAAGT+AGG | - | chr1_2:52260954-52260973 | None:intergenic | 35.0% | |
| ! | GGTTACTACTATTTGTTGCA+AGG | + | chr1_2:52261027-52261046 | Msa0076280:CDS | 35.0% |
| TTTCCCAAAACAAATGTCCT+TGG | - | chr1_2:52261053-52261072 | None:intergenic | 35.0% | |
| ! | CTTGCATTGGCAAAGTAAAT+TGG | - | chr1_2:52261164-52261183 | None:intergenic | 35.0% |
| ! | CTCTCTTAAATAGCTTGCAT+TGG | - | chr1_2:52261177-52261196 | None:intergenic | 35.0% |
| ATGCAAGCTATTTAAGAGAG+AGG | + | chr1_2:52261177-52261196 | Msa0076280:CDS | 35.0% | |
| CACATGCTAGAGAAAGAAAA+AGG | - | chr1_2:52261229-52261248 | None:intergenic | 35.0% | |
| ! | CTCTAGCATGTGAAATTTTC+TGG | + | chr1_2:52261237-52261256 | Msa0076280:intron | 35.0% |
| CTTGTGTGTCAAATTATTCC+AGG | - | chr1_2:52261263-52261282 | None:intergenic | 35.0% | |
| CTGGAATAATTTGACACACA+AGG | + | chr1_2:52261261-52261280 | Msa0076280:intron | 35.0% | |
| !! | AGTAATGAGCCTTTGAGATA+TGG | + | chr1_2:52261392-52261411 | Msa0076280:intron | 35.0% |
| ! | GTAATTTTATTGGCAGCTGT+TGG | + | chr1_2:52261462-52261481 | Msa0076280:intron | 35.0% |
| GTTGGAAATATTGATACGAG+TGG | + | chr1_2:52261480-52261499 | Msa0076280:CDS | 35.0% | |
| GCTTGAAGAGACTAAAAAGA+TGG | + | chr1_2:52261512-52261531 | Msa0076280:CDS | 35.0% | |
| CCAAAACAAGCTGTAATCAT+AGG | - | chr1_2:52261655-52261674 | None:intergenic | 35.0% | |
| !! | CCTATGATTACAGCTTGTTT+TGG | + | chr1_2:52261652-52261671 | Msa0076280:intron | 35.0% |
| ! | AATTTCCTCCTACATCCTTT+TGG | - | chr1_2:52261724-52261743 | None:intergenic | 35.0% |
| AAAAGGATGTAGGAGGAAAT+TGG | + | chr1_2:52261723-52261742 | Msa0076280:CDS | 35.0% | |
| AAATTGGATCTATCTGACAG+TGG | + | chr1_2:52261739-52261758 | Msa0076280:CDS | 35.0% | |
| TTGCATCCTAATTCCTAAGT+TGG | + | chr1_2:52262010-52262029 | Msa0076280:three_prime_UTR | 35.0% | |
| CTGGAACTGGAGAAAATTAA+AGG | + | chr1_2:52262142-52262161 | Msa0076280:three_prime_UTR | 35.0% | |
| TGTTGAGAGTTGAGACACTT+AGG | - | chr1_2:52254765-52254784 | None:intergenic | 40.0% | |
| GCTAGTGAAAATGATGAGGA+TGG | - | chr1_2:52254788-52254807 | None:intergenic | 40.0% | |
| GTGATTGAGAATGAGGAGAT+AGG | - | chr1_2:52254829-52254848 | None:intergenic | 40.0% | |
| GGTTGAAGTGATTGAGAATG+AGG | - | chr1_2:52254836-52254855 | None:intergenic | 40.0% | |
| AAACACCTTGCTTATGCATG+TGG | + | chr1_2:52254899-52254918 | Msa0076280:five_prime_UTR | 40.0% | |
| AAGTTCCACATGCATAAGCA+AGG | - | chr1_2:52254907-52254926 | None:intergenic | 40.0% | |
| TTCAAAAATGGTTGAGGAGG+TGG | - | chr1_2:52255084-52255103 | None:intergenic | 40.0% | |
| GACTTCAAAAATGGTTGAGG+AGG | - | chr1_2:52255087-52255106 | None:intergenic | 40.0% | |
| TCTTTCCAGATGATCCATTG+AGG | + | chr1_2:52255133-52255152 | Msa0076280:CDS | 40.0% | |
| !! | AGCACCAACTTTTTAGAAGC+TGG | - | chr1_2:52255174-52255193 | None:intergenic | 40.0% |
| !! | GCTTCTAAAAAGTTGGTGCT+TGG | + | chr1_2:52255174-52255193 | Msa0076280:CDS | 40.0% |
| ! | TTGGTGCCCATTCAAATATG+GGG | - | chr1_2:52255215-52255234 | None:intergenic | 40.0% |
| !! | CTTGGTGCCCATTCAAATAT+GGG | - | chr1_2:52255216-52255235 | None:intergenic | 40.0% |
| ATAGTCCAAGAATTGGAGGA+AGG | - | chr1_2:52255335-52255354 | None:intergenic | 40.0% | |
| TCACATAGTCCAAGAATTGG+AGG | - | chr1_2:52255339-52255358 | None:intergenic | 40.0% | |
| TGACTAGATGAATGGTGAAC+TGG | - | chr1_2:52255569-52255588 | None:intergenic | 40.0% | |
| TCAACTATAGTAAGCCTCAG+GGG | + | chr1_2:52255593-52255612 | Msa0076280:intron | 40.0% | |
| !! | CAACTTTATTGATTCGTCCC+GGG | + | chr1_2:52255815-52255834 | Msa0076280:intron | 40.0% |
| !!! | TCCTAAAATTTTTGGTGCCC+GGG | - | chr1_2:52255835-52255854 | None:intergenic | 40.0% |
| !!! | GTCCTAAAATTTTTGGTGCC+CGG | - | chr1_2:52255836-52255855 | None:intergenic | 40.0% |
| !! | ATGCAATGATGGGTAGTTCA+AGG | + | chr1_2:52256259-52256278 | Msa0076280:CDS | 40.0% |
| !! | TGCAATGATGGGTAGTTCAA+GGG | + | chr1_2:52256260-52256279 | Msa0076280:CDS | 40.0% |
| ATTAACCTCATTGGCCAACA+TGG | - | chr1_2:52256331-52256350 | None:intergenic | 40.0% | |
| TTGGGTAGGATTAACCTCAT+TGG | - | chr1_2:52256340-52256359 | None:intergenic | 40.0% | |
| AGAATGTAGCTGTGAAAGCA+AGG | - | chr1_2:52256383-52256402 | None:intergenic | 40.0% | |
| TTCACAGCTACATTCTTTGC+TGG | + | chr1_2:52256387-52256406 | Msa0076280:CDS | 40.0% | |
| ! | TGGACTTTTGCAAGCTTCAT+TGG | + | chr1_2:52256407-52256426 | Msa0076280:CDS | 40.0% |
| ! | GGACTTTTGCAAGCTTCATT+GGG | + | chr1_2:52256408-52256427 | Msa0076280:CDS | 40.0% |
| AAGCTTCATTGGGTCTCTTT+AGG | + | chr1_2:52256418-52256437 | Msa0076280:CDS | 40.0% | |
| GCAAGATATCTATCCTGGTT+AGG | - | chr1_2:52256609-52256628 | None:intergenic | 40.0% | |
| AATGGACGAATCTCATTGCA+TGG | - | chr1_2:52256676-52256695 | None:intergenic | 40.0% | |
| CAGCAGCTGAAATCAATTCT+AGG | + | chr1_2:52257319-52257338 | Msa0076280:CDS | 40.0% | |
| GGTAAAAATGGATCGCATGA+CGG | - | chr1_2:52257380-52257399 | None:intergenic | 40.0% | |
| !! | CAAACCTATTTCTCTAGAGC+GGG | + | chr1_2:52257465-52257484 | Msa0076280:intron | 40.0% |
| !! | AAACCTATTTCTCTAGAGCG+GGG | + | chr1_2:52257466-52257485 | Msa0076280:intron | 40.0% |
| TCCTTTCACAGTCATAGTCA+TGG | - | chr1_2:52257888-52257907 | None:intergenic | 40.0% | |
| CTTATCAAGAGTAGCAGCTA+GGG | - | chr1_2:52258027-52258046 | None:intergenic | 40.0% | |
| TCTTATCAAGAGTAGCAGCT+AGG | - | chr1_2:52258028-52258047 | None:intergenic | 40.0% | |
| !!! | CTACGTAGCTACTTTTGTCA+TGG | - | chr1_2:52258106-52258125 | None:intergenic | 40.0% |
| CTATAGCACTCAACAGTGTT+TGG | - | chr1_2:52258837-52258856 | None:intergenic | 40.0% | |
| CAAACACTGTTGAGTGCTAT+AGG | + | chr1_2:52258835-52258854 | Msa0076280:intron | 40.0% | |
| GTAACATGTGTACTCATGGT+GGG | - | chr1_2:52258936-52258955 | None:intergenic | 40.0% | |
| TGTAACATGTGTACTCATGG+TGG | - | chr1_2:52258937-52258956 | None:intergenic | 40.0% | |
| ATGACCACAGCTATCAAAAC+TGG | + | chr1_2:52259325-52259344 | Msa0076280:CDS | 40.0% | |
| TGTTGGCATTATAGCTCTTG+CGG | + | chr1_2:52259354-52259373 | Msa0076280:CDS | 40.0% | |
| !! | TGAAACTAGACAAGGCATTG+AGG | + | chr1_2:52259542-52259561 | Msa0076280:intron | 40.0% |
| TTGGTAAAGGTCATGTGATC+TGG | - | chr1_2:52259702-52259721 | None:intergenic | 40.0% | |
| ACCTTGCCAAGGTTTATATG+AGG | + | chr1_2:52259840-52259859 | Msa0076280:intron | 40.0% | |
| ACCTCATATAAACCTTGGCA+AGG | - | chr1_2:52259844-52259863 | None:intergenic | 40.0% | |
| !!! | GAATGTTGGTGCTGTTTTTC+AGG | + | chr1_2:52260398-52260417 | Msa0076280:intron | 40.0% |
| !! | TTTTCAGGAAGGAATAGCTG+TGG | + | chr1_2:52260413-52260432 | Msa0076280:intron | 40.0% |
| TTTCAGGAAGGAATAGCTGT+GGG | + | chr1_2:52260414-52260433 | Msa0076280:intron | 40.0% | |
| GATGATGTTTACCAGTTGTG+AGG | - | chr1_2:52260539-52260558 | None:intergenic | 40.0% | |
| GCATCCAGCATTATAGTTCA+CGG | - | chr1_2:52260659-52260678 | None:intergenic | 40.0% | |
| GTCTGCATTAGCGCATATAT+GGG | + | chr1_2:52260862-52260881 | Msa0076280:CDS | 40.0% | |
| ! | GTCTTTGGCAGTGTTGAAAT+TGG | + | chr1_2:52260889-52260908 | Msa0076280:CDS | 40.0% |
| AGGTTGCAATATCAGTGCTT+CGG | + | chr1_2:52261006-52261025 | Msa0076280:intron | 40.0% | |
| ! | TACTATTTGTTGCAAGGCCA+AGG | + | chr1_2:52261033-52261052 | Msa0076280:CDS | 40.0% |
| ! | AAGGCCAAGGACATTTGTTT+TGG | + | chr1_2:52261046-52261065 | Msa0076280:CDS | 40.0% |
| !! | AGGCCAAGGACATTTGTTTT+GGG | + | chr1_2:52261047-52261066 | Msa0076280:CDS | 40.0% |
| TTGTTCATAGGATCTCAAGG+TGG | + | chr1_2:52261293-52261312 | Msa0076280:intron | 40.0% | |
| CAACAAATCCAGCTTCCAAA+AGG | + | chr1_2:52261706-52261725 | Msa0076280:CDS | 40.0% | |
| TCCCAAAAGAGATGAATCAG+AGG | + | chr1_2:52261802-52261821 | Msa0076280:CDS | 40.0% | |
| ! | CCCTCTGATTCATCTCTTTT+GGG | - | chr1_2:52261806-52261825 | None:intergenic | 40.0% |
| CCCAAAAGAGATGAATCAGA+GGG | + | chr1_2:52261803-52261822 | Msa0076280:CDS | 40.0% | |
| ! | ACCCTCTGATTCATCTCTTT+TGG | - | chr1_2:52261807-52261826 | None:intergenic | 40.0% |
| AAAGAGATGAATCAGAGGGT+TGG | + | chr1_2:52261807-52261826 | Msa0076280:CDS | 40.0% | |
| ! | AATGGCCTTTGAAAAGGTTC+TGG | + | chr1_2:52262123-52262142 | Msa0076280:three_prime_UTR | 40.0% |
| ! | CAGTTCCAGAACCTTTTCAA+AGG | - | chr1_2:52262131-52262150 | None:intergenic | 40.0% |
| !! | CTTTGAAAAGGTTCTGGAAC+TGG | + | chr1_2:52262129-52262148 | Msa0076280:three_prime_UTR | 40.0% |
| CAACGTTCATACCCGAACAA+GGG | - | chr1_2:52255035-52255054 | None:intergenic | 45.0% | |
| TCAACGTTCATACCCGAACA+AGG | - | chr1_2:52255036-52255055 | None:intergenic | 45.0% | |
| ! | AACGTTGATGAGAGTGTGCA+TGG | + | chr1_2:52255048-52255067 | Msa0076280:CDS | 45.0% |
| TTCCAGATGATCCATTGAGG+AGG | + | chr1_2:52255136-52255155 | Msa0076280:CDS | 45.0% | |
| AACCTCCTCAATGGATCATC+TGG | - | chr1_2:52255141-52255160 | None:intergenic | 45.0% | |
| !! | GCTTGGTGCCCATTCAAATA+TGG | - | chr1_2:52255217-52255236 | None:intergenic | 45.0% |
| TGGCATCACTATTGCTAGCT+TGG | + | chr1_2:52255272-52255291 | Msa0076280:CDS | 45.0% | |
| TTGGCATAGCTAATGCCTTG+AGG | - | chr1_2:52255303-52255322 | None:intergenic | 45.0% | |
| TCCAAGAATTGGAGGAAGGT+TGG | - | chr1_2:52255331-52255350 | None:intergenic | 45.0% | |
| ! | TCCCGGGCACCAAAAATTTT+AGG | + | chr1_2:52255831-52255850 | Msa0076280:intron | 45.0% |
| GATGGGTAGTTCAAGGGATT+TGG | + | chr1_2:52256266-52256285 | Msa0076280:CDS | 45.0% | |
| AGTTCAAGGGATTTGGCAGT+TGG | + | chr1_2:52256273-52256292 | Msa0076280:CDS | 45.0% | |
| GCAGTTGGATCTCTTCTGAT+GGG | + | chr1_2:52256303-52256322 | Msa0076280:CDS | 45.0% | |
| !! | TCTTCTGATGGGTTCCATGT+TGG | + | chr1_2:52256314-52256333 | Msa0076280:CDS | 45.0% |
| GCAAGGTGGAGAAAAAGCTT+AGG | - | chr1_2:52256366-52256385 | None:intergenic | 45.0% | |
| ATGTAGCTGTGAAAGCAAGG+TGG | - | chr1_2:52256380-52256399 | None:intergenic | 45.0% | |
| GAAGGGCAAGATATCTATCC+TGG | - | chr1_2:52256614-52256633 | None:intergenic | 45.0% | |
| TATTTGCCGGAAATCAAGGG+AGG | + | chr1_2:52257064-52257083 | Msa0076280:intron | 45.0% | |
| CCATTACCTCCCTTGATTTC+CGG | - | chr1_2:52257073-52257092 | None:intergenic | 45.0% | |
| TGTCACATGCAGCCATAGTA+GGG | + | chr1_2:52257263-52257282 | Msa0076280:CDS | 45.0% | |
| GGATACGATATCAGCAGCAT+GGG | - | chr1_2:52257359-52257378 | None:intergenic | 45.0% | |
| CTCTCAATCATGCGATCTCT+TGG | + | chr1_2:52257524-52257543 | Msa0076280:intron | 45.0% | |
| TTTGGTTATTGCAGTGGAGG+TGG | + | chr1_2:52257667-52257686 | Msa0076280:intron | 45.0% | |
| TTGGTTATTGCAGTGGAGGT+GGG | + | chr1_2:52257668-52257687 | Msa0076280:intron | 45.0% | |
| GCCATGACTATGACTGTGAA+AGG | + | chr1_2:52257884-52257903 | Msa0076280:intron | 45.0% | |
| TGAAATTGGAACTGCAACGG+TGG | + | chr1_2:52258212-52258231 | Msa0076280:intron | 45.0% | |
| GCTGACACCCAAAAAAACCT+CGG | - | chr1_2:52258276-52258295 | None:intergenic | 45.0% | |
| CAGCACACTTCCCAGTATAA+CGG | - | chr1_2:52258316-52258335 | None:intergenic | 45.0% | |
| GAATATGGGTGGTATTCGGT+TGG | - | chr1_2:52258863-52258882 | None:intergenic | 45.0% | |
| TCCACCATCACTCACAGATT+TGG | + | chr1_2:52259285-52259304 | Msa0076280:CDS | 45.0% | |
| ACCAAATCTGTGAGTGATGG+TGG | - | chr1_2:52259289-52259308 | None:intergenic | 45.0% | |
| !! | AAGGCCAGTTTTGATAGCTG+TGG | - | chr1_2:52259332-52259351 | None:intergenic | 45.0% |
| !!! | GTTGGTGCTGTTTTTCAGGA+AGG | + | chr1_2:52260402-52260421 | Msa0076280:intron | 45.0% |
| GTTCTATTACACTCCTCTGG+TGG | + | chr1_2:52260747-52260766 | Msa0076280:CDS | 45.0% | |
| GTCAATCTTCCAGAGATGGA+TGG | - | chr1_2:52260827-52260846 | None:intergenic | 45.0% | |
| CGTCTGCATTAGCGCATATA+TGG | + | chr1_2:52260861-52260880 | Msa0076280:CDS | 45.0% | |
| ! | GCATATATGGGCGTTGTCTT+TGG | + | chr1_2:52260874-52260893 | Msa0076280:CDS | 45.0% |
| TGTTCTCCTACTTCTCAGTC+TGG | + | chr1_2:52260945-52260964 | Msa0076280:intron | 45.0% | |
| CCGGAAACACGATTTGCATT+CGG | - | chr1_2:52261116-52261135 | None:intergenic | 45.0% | |
| CCGAATGCAAATCGTGTTTC+CGG | + | chr1_2:52261113-52261132 | Msa0076280:CDS | 45.0% | |
| !! | GCATGTGAAATTTTCTGGCC+TGG | + | chr1_2:52261242-52261261 | Msa0076280:intron | 45.0% |
| !!! | CAGCTTGTTTTGGTCAATCC+TGG | + | chr1_2:52261662-52261681 | Msa0076280:intron | 45.0% |
| TTTGGTCAATCCTGGAAGTG+AGG | + | chr1_2:52261670-52261689 | Msa0076280:CDS | 45.0% | |
| TTCTTCATCACCTCACTTCC+AGG | - | chr1_2:52261683-52261702 | None:intergenic | 45.0% | |
| TCCAGCTTCCAAAAGGATGT+AGG | + | chr1_2:52261713-52261732 | Msa0076280:CDS | 45.0% | |
| !! | TCCTACATCCTTTTGGAAGC+TGG | - | chr1_2:52261717-52261736 | None:intergenic | 45.0% |
| AGCTTCCAAAAGGATGTAGG+AGG | + | chr1_2:52261716-52261735 | Msa0076280:CDS | 45.0% | |
| !! | TTATTAAAAATTACTAAAAA+TGG | + | chr1_2:52256062-52256081 | Msa0076280:intron | 5.0% |
| !!! | TAAATAAACAAAAATTTTAT+TGG | - | chr1_2:52257647-52257666 | None:intergenic | 5.0% |
| !!! | AAAATTTTTGTTTATTTATT+TGG | + | chr1_2:52257649-52257668 | Msa0076280:intron | 5.0% |
| !!! | ACTAATATATATTTATTTTT+TGG | + | chr1_2:52259204-52259223 | Msa0076280:intron | 5.0% |
| ! | TGATGAGAGTGTGCATGGTG+TGG | + | chr1_2:52255053-52255072 | Msa0076280:CDS | 50.0% |
| ! | GCTAGCTTGGCTATTCCTCA+AGG | + | chr1_2:52255285-52255304 | Msa0076280:CDS | 50.0% |
| TGGAGGAAGGTTGGCAAGTT+TGG | - | chr1_2:52255322-52255341 | None:intergenic | 50.0% | |
| GCCAACCTTCCTCCAATTCT+TGG | + | chr1_2:52255327-52255346 | Msa0076280:CDS | 50.0% | |
| ACTATAGTAAGCCTCAGGGG+TGG | + | chr1_2:52255596-52255615 | Msa0076280:intron | 50.0% | |
| !!! | TTTTGGTGCCCCTACAAACG+CGG | - | chr1_2:52255646-52255665 | None:intergenic | 50.0% |
| GGATTTGGCAGTTGGAACTG+TGG | + | chr1_2:52256281-52256300 | Msa0076280:CDS | 50.0% | |
| GGCAGTTGGATCTCTTCTGA+TGG | + | chr1_2:52256302-52256321 | Msa0076280:CDS | 50.0% | |
| CCGGAAATCAAGGGAGGTAA+TGG | + | chr1_2:52257070-52257089 | Msa0076280:intron | 50.0% | |
| GTGCAGGTTAGGGTTTATCG+TGG | + | chr1_2:52257234-52257253 | Msa0076280:intron | 50.0% | |
| CTACTATGGCTGCATGTGAC+AGG | - | chr1_2:52257264-52257283 | None:intergenic | 50.0% | |
| CTGTCACATGCAGCCATAGT+AGG | + | chr1_2:52257262-52257281 | Msa0076280:CDS | 50.0% | |
| TGCAGCCATAGTAGGGTTCA+TGG | + | chr1_2:52257270-52257289 | Msa0076280:CDS | 50.0% | |
| GCAGCCATAGTAGGGTTCAT+GGG | + | chr1_2:52257271-52257290 | Msa0076280:CDS | 50.0% | |
| TCCTCCCATGAACCCTACTA+TGG | - | chr1_2:52257278-52257297 | None:intergenic | 50.0% | |
| CGGATACGATATCAGCAGCA+TGG | - | chr1_2:52257360-52257379 | None:intergenic | 50.0% | |
| !! | AGACCCCGCTCTAGAGAAAT+AGG | - | chr1_2:52257472-52257491 | None:intergenic | 50.0% |
| CATGCGATCTCTTGGAAGAC+CGG | + | chr1_2:52257532-52257551 | Msa0076280:intron | 50.0% | |
| CAAGAGTAGCAGCTAGGGTA+GGG | - | chr1_2:52258022-52258041 | None:intergenic | 50.0% | |
| TCAAGAGTAGCAGCTAGGGT+AGG | - | chr1_2:52258023-52258042 | None:intergenic | 50.0% | |
| TGCAGAGCAAGAAACAACCG+AGG | + | chr1_2:52258256-52258275 | Msa0076280:intron | 50.0% | |
| ! | CGTTATACTGGGAAGTGTGC+TGG | + | chr1_2:52258314-52258333 | Msa0076280:CDS | 50.0% |
| !! | GCAAGCTTGTTACCTTGCCA+AGG | + | chr1_2:52259829-52259848 | Msa0076280:intron | 50.0% |
| ACCTCTTGCTACCTCACAAC+TGG | + | chr1_2:52260525-52260544 | Msa0076280:CDS | 50.0% | |
| ACCAGTTGTGAGGTAGCAAG+AGG | - | chr1_2:52260529-52260548 | None:intergenic | 50.0% | |
| !! | TTCAGGGCCATTTTCGCGTT+CGG | + | chr1_2:52260633-52260652 | Msa0076280:intron | 50.0% |
| TCGGCCGTGAACTATAATGC+TGG | + | chr1_2:52260652-52260671 | Msa0076280:CDS | 50.0% | |
| ATGAAGCAGCCATCCATCTC+TGG | + | chr1_2:52260815-52260834 | Msa0076280:CDS | 50.0% | |
| CTCAAGGTGGATCGATGAAG+AGG | + | chr1_2:52261306-52261325 | Msa0076280:CDS | 50.0% | |
| GCAGTTGGAACTGTGGCAGT+TGG | + | chr1_2:52256288-52256307 | Msa0076280:CDS | 55.0% | |
| GGGTTCCATGTTGGCCAATG+AGG | + | chr1_2:52256323-52256342 | Msa0076280:CDS | 55.0% | |
| ATGAGGTGGGGTGCAGGTTA+GGG | + | chr1_2:52257224-52257243 | Msa0076280:intron | 55.0% | |
| GCCATAGTAGGGTTCATGGG+AGG | + | chr1_2:52257274-52257293 | Msa0076280:CDS | 55.0% | |
| !! | AGGTGGGAAAGCGCTGTGTT+GGG | + | chr1_2:52257684-52257703 | Msa0076280:CDS | 55.0% |
| !! | CCCAGTATAACGGACGCCAA+CGG | - | chr1_2:52258306-52258325 | None:intergenic | 55.0% |
| CCGTTGGCGTCCGTTATACT+GGG | + | chr1_2:52258303-52258322 | Msa0076280:CDS | 55.0% | |
| CACTTGAACACCGTGGTGCT+CGG | - | chr1_2:52258355-52258374 | None:intergenic | 55.0% | |
| TGCTCACCACTTGAACACCG+TGG | - | chr1_2:52258362-52258381 | None:intergenic | 55.0% | |
| TTCACGGCCGAACGCGAAAA+TGG | - | chr1_2:52260643-52260662 | None:intergenic | 55.0% | |
| ATGGCTGCTAGTACCACCAG+AGG | - | chr1_2:52260763-52260782 | None:intergenic | 55.0% | |
| TAGTAAGCCTCAGGGGTGGC+CGG | + | chr1_2:52255600-52255619 | Msa0076280:intron | 60.0% | |
| TAACGCATGAGGTGGGGTGC+AGG | + | chr1_2:52257218-52257237 | Msa0076280:intron | 60.0% | |
| CATGAGGTGGGGTGCAGGTT+AGG | + | chr1_2:52257223-52257242 | Msa0076280:intron | 60.0% | |
| CATGGGAGGAGCAGCTACAG+TGG | + | chr1_2:52257288-52257307 | Msa0076280:CDS | 60.0% | |
| !! | GAGGTGGGAAAGCGCTGTGT+TGG | + | chr1_2:52257683-52257702 | Msa0076280:CDS | 60.0% |
| GGTGTCAGCAATGACGCCGT+TGG | + | chr1_2:52258287-52258306 | Msa0076280:CDS | 60.0% | |
| GCCGTTGGCGTCCGTTATAC+TGG | + | chr1_2:52258302-52258321 | Msa0076280:CDS | 60.0% | |
| TTCACTCACGCCGAGCACCA+CGG | + | chr1_2:52258342-52258361 | Msa0076280:CDS | 60.0% | |
| CGAGCACCACGGTGTTCAAG+TGG | + | chr1_2:52258353-52258372 | Msa0076280:CDS | 60.0% | |
| CCCTACAAACGCGGTGCCCT+GGG | - | chr1_2:52255637-52255656 | None:intergenic | 65.0% | |
| !! | CCCAGGGCACCGCGTTTGTA+GGG | + | chr1_2:52255634-52255653 | Msa0076280:intron | 65.0% |
| !! | CCAGGGCACCGCGTTTGTAG+GGG | + | chr1_2:52255635-52255654 | Msa0076280:intron | 65.0% |
| TAAGCCTCAGGGGTGGCCGG+AGG | + | chr1_2:52255603-52255622 | Msa0076280:intron | 70.0% | |
| AAGCCTCAGGGGTGGCCGGA+GGG | + | chr1_2:52255604-52255623 | Msa0076280:intron | 70.0% | |
| !! | GCCCAGGGCACCGCGTTTGT+AGG | + | chr1_2:52255633-52255652 | Msa0076280:intron | 70.0% |
| CCCCTACAAACGCGGTGCCC+TGG | - | chr1_2:52255638-52255657 | None:intergenic | 70.0% | |
| AGCCTCAGGGGTGGCCGGAG+GGG | + | chr1_2:52255605-52255624 | Msa0076280:intron | 75.0% | |
| ! | CTCAGGGGTGGCCGGAGGGG+CGG | + | chr1_2:52255608-52255627 | Msa0076280:intron | 80.0% |
| ! | CGCCCCTCCGGCCACCCCTG+AGG | - | chr1_2:52255610-52255629 | None:intergenic | 85.0% |
| ! | GCCGGAGGGGCGGCAGCCCA+GGG | + | chr1_2:52255618-52255637 | Msa0076280:intron | 85.0% |
| ! | GCCCTGGGCTGCCGCCCCTC+CGG | - | chr1_2:52255622-52255641 | None:intergenic | 85.0% |
| ! | GGCCGGAGGGGCGGCAGCCC+AGG | + | chr1_2:52255617-52255636 | Msa0076280:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 52254750 | 52262192 | 52254750 | ID=Msa0076280;Name=Msa0076280 |
| chr1_2 | mRNA | 52254750 | 52262192 | 52254750 | ID=Msa0076280-mRNA-1;Parent=Msa0076280;Name=Msa0076280-mRNA-1;_AED=0.07;_eAED=0.07;_QI=256|1|1|1|1|1|12|351|656 |
| chr1_2 | exon | 52254750 | 52255354 | 52254750 | ID=Msa0076280-mRNA-1:exon:16097;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52256232 | 52256439 | 52256232 | ID=Msa0076280-mRNA-1:exon:16098;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52257240 | 52257411 | 52257240 | ID=Msa0076280-mRNA-1:exon:16099;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52257681 | 52257746 | 52257681 | ID=Msa0076280-mRNA-1:exon:16100;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52258261 | 52258374 | 52258261 | ID=Msa0076280-mRNA-1:exon:16101;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52259259 | 52259375 | 52259259 | ID=Msa0076280-mRNA-1:exon:16102;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52260420 | 52260546 | 52260420 | ID=Msa0076280-mRNA-1:exon:16103;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52260638 | 52260924 | 52260638 | ID=Msa0076280-mRNA-1:exon:16104;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52261008 | 52261198 | 52261008 | ID=Msa0076280-mRNA-1:exon:16105;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52261303 | 52261388 | 52261303 | ID=Msa0076280-mRNA-1:exon:16106;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52261478 | 52261554 | 52261478 | ID=Msa0076280-mRNA-1:exon:16107;Parent=Msa0076280-mRNA-1 |
| chr1_2 | exon | 52261665 | 52262192 | 52261665 | ID=Msa0076280-mRNA-1:exon:16108;Parent=Msa0076280-mRNA-1 |
| chr1_2 | five_prime_UTR | 52254750 | 52255005 | 52254750 | ID=Msa0076280-mRNA-1:five_prime_utr;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52255006 | 52255354 | 52255006 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52256232 | 52256439 | 52256232 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52257240 | 52257411 | 52257240 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52257681 | 52257746 | 52257681 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52258261 | 52258374 | 52258261 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52259259 | 52259375 | 52259259 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52260420 | 52260546 | 52260420 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52260638 | 52260924 | 52260638 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52261008 | 52261198 | 52261008 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52261303 | 52261388 | 52261303 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52261478 | 52261554 | 52261478 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | CDS | 52261665 | 52261841 | 52261665 | ID=Msa0076280-mRNA-1:cds;Parent=Msa0076280-mRNA-1 |
| chr1_2 | three_prime_UTR | 52261842 | 52262192 | 52261842 | ID=Msa0076280-mRNA-1:three_prime_utr;Parent=Msa0076280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
