Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794040 | XP_003610789.2 | 91.459 | 761 | 47 | 2 | 1 | 743 | 1 | 761 | 0.0 | 1415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794040 | G7K528 | 91.459 | 761 | 47 | 2 | 1 | 743 | 1 | 761 | 0.0 | 1415 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0794040 | 0.810460 | 1.140008e-50 | -8.615850e-47 |
| Msa0026120 | Msa0794040 | 0.822603 | 2.168624e-53 | -8.615850e-47 |
| Msa0026770 | Msa0794040 | 0.804073 | 2.573613e-49 | -8.615850e-47 |
| Msa0028610 | Msa0794040 | 0.817876 | 2.626269e-52 | -8.615850e-47 |
| Msa0030030 | Msa0794040 | 0.825204 | 5.324956e-54 | -8.615850e-47 |
| Msa0030710 | Msa0794040 | 0.806211 | 9.181653e-50 | -8.615850e-47 |
| Msa0035090 | Msa0794040 | 0.861203 | 1.210147e-63 | -8.615850e-47 |
| Msa0039200 | Msa0794040 | 0.853460 | 2.354342e-61 | -8.615850e-47 |
| Msa0040190 | Msa0794040 | 0.843751 | 1.155286e-58 | -8.615850e-47 |
| Msa0046670 | Msa0794040 | 0.831340 | 1.764937e-55 | -8.615850e-47 |
| Msa0074310 | Msa0794040 | 0.827689 | 1.361856e-54 | -8.615850e-47 |
| Msa0076280 | Msa0794040 | 0.820682 | 6.028925e-53 | -8.615850e-47 |
| Msa0077330 | Msa0794040 | 0.839753 | 1.312025e-57 | -8.615850e-47 |
| Msa0083200 | Msa0794040 | 0.846168 | 2.573143e-59 | -8.615850e-47 |
| Msa0083570 | Msa0794040 | 0.839614 | 1.426560e-57 | -8.615850e-47 |
| Msa0086820 | Msa0794040 | 0.856318 | 3.489454e-62 | -8.615850e-47 |
| Msa0087880 | Msa0794040 | 0.831210 | 1.898994e-55 | -8.615850e-47 |
| Msa0092750 | Msa0794040 | 0.804866 | 1.758723e-49 | -8.615850e-47 |
| Msa0096230 | Msa0794040 | 0.836553 | 8.747595e-57 | -8.615850e-47 |
| Msa0101150 | Msa0794040 | 0.814328 | 1.628985e-51 | -8.615850e-47 |
| Msa0101210 | Msa0794040 | 0.810045 | 1.401251e-50 | -8.615850e-47 |
| Msa0112800 | Msa0794040 | 0.829537 | 4.868814e-55 | -8.615850e-47 |
| Msa0119000 | Msa0794040 | 0.806260 | 8.969481e-50 | -8.615850e-47 |
| Msa0606680 | Msa0794040 | 0.815096 | 1.101138e-51 | -8.615850e-47 |
| Msa0619060 | Msa0794040 | 0.809278 | 2.048200e-50 | -8.615850e-47 |
| Msa0619480 | Msa0794040 | 0.840164 | 1.025452e-57 | -8.615850e-47 |
| Msa0622400 | Msa0794040 | 0.837420 | 5.252329e-57 | -8.615850e-47 |
| Msa0624890 | Msa0794040 | 0.859574 | 3.764980e-63 | -8.615850e-47 |
| Msa0625510 | Msa0794040 | 0.802594 | 5.209878e-49 | -8.615850e-47 |
| Msa0626890 | Msa0794040 | 0.822285 | 2.570260e-53 | -8.615850e-47 |
| Msa0641970 | Msa0794040 | 0.859025 | 5.502516e-63 | -8.615850e-47 |
| Msa0653710 | Msa0794040 | 0.803175 | 3.952378e-49 | -8.615850e-47 |
| Msa0659130 | Msa0794040 | 0.807743 | 4.353749e-50 | -8.615850e-47 |
| Msa0659640 | Msa0794040 | 0.844642 | 6.661723e-59 | -8.615850e-47 |
| Msa0662850 | Msa0794040 | 0.843445 | 1.394862e-58 | -8.615850e-47 |
| Msa0665010 | Msa0794040 | 0.812786 | 3.557299e-51 | -8.615850e-47 |
| Msa0681040 | Msa0794040 | 0.849769 | 2.613360e-60 | -8.615850e-47 |
| Msa0694170 | Msa0794040 | 0.810948 | 8.939680e-51 | -8.615850e-47 |
| Msa0698880 | Msa0794040 | 0.809712 | 1.652034e-50 | -8.615850e-47 |
| Msa0704750 | Msa0794040 | 0.811329 | 7.391169e-51 | -8.615850e-47 |
| Msa0705610 | Msa0794040 | 0.812456 | 4.201897e-51 | -8.615850e-47 |
| Msa0706530 | Msa0794040 | 0.800871 | 1.175872e-48 | -8.615850e-47 |
| Msa0706710 | Msa0794040 | 0.826551 | 2.549947e-54 | -8.615850e-47 |
| Msa0707870 | Msa0794040 | 0.832261 | 1.045838e-55 | -8.615850e-47 |
| Msa0713530 | Msa0794040 | 0.849303 | 3.526492e-60 | -8.615850e-47 |
| Msa0714020 | Msa0794040 | 0.815140 | 1.076531e-51 | -8.615850e-47 |
| Msa0714160 | Msa0794040 | 0.821201 | 4.578789e-53 | -8.615850e-47 |
| Msa0721420 | Msa0794040 | 0.809635 | 1.716234e-50 | -8.615850e-47 |
| Msa0724490 | Msa0794040 | 0.857894 | 1.195778e-62 | -8.615850e-47 |
| Msa0724500 | Msa0794040 | 0.813501 | 2.479799e-51 | -8.615850e-47 |
| Msa0729590 | Msa0794040 | 0.804829 | 1.789906e-49 | -8.615850e-47 |
| Msa0729780 | Msa0794040 | 0.813014 | 3.170632e-51 | -8.615850e-47 |
| Msa0731740 | Msa0794040 | 0.883257 | 5.229883e-71 | -8.615850e-47 |
| Msa0733570 | Msa0794040 | 0.858388 | 8.522877e-63 | -8.615850e-47 |
| Msa0736330 | Msa0794040 | 0.852962 | 3.272143e-61 | -8.615850e-47 |
| Msa0736930 | Msa0794040 | 0.881228 | 2.857908e-70 | -8.615850e-47 |
| Msa0739570 | Msa0794040 | 0.820490 | 6.673828e-53 | -8.615850e-47 |
| Msa0751000 | Msa0794040 | 0.953185 | 4.783045e-111 | -8.615850e-47 |
| Msa0755590 | Msa0794040 | 0.857512 | 1.551432e-62 | -8.615850e-47 |
| Msa0765020 | Msa0794040 | 0.845598 | 3.674236e-59 | -8.615850e-47 |
| Msa0765040 | Msa0794040 | 0.809847 | 1.545263e-50 | -8.615850e-47 |
| Msa0766880 | Msa0794040 | 0.844126 | 9.167313e-59 | -8.615850e-47 |
| Msa0770020 | Msa0794040 | 0.805948 | 1.043045e-49 | -8.615850e-47 |
| Msa0771960 | Msa0794040 | 0.846221 | 2.489187e-59 | -8.615850e-47 |
| Msa0772040 | Msa0794040 | 0.832146 | 1.116560e-55 | -8.615850e-47 |
| Msa0774680 | Msa0794040 | 0.853685 | 2.029822e-61 | -8.615850e-47 |
| Msa0778060 | Msa0794040 | 0.847403 | 1.182414e-59 | -8.615850e-47 |
| Msa0781900 | Msa0794040 | 0.842089 | 3.199388e-58 | -8.615850e-47 |
| Msa0782330 | Msa0794040 | 0.812207 | 4.760783e-51 | -8.615850e-47 |
| Msa0786090 | Msa0794040 | 0.800888 | 1.166534e-48 | -8.615850e-47 |
| Msa0786970 | Msa0794040 | 0.852054 | 5.935519e-61 | -8.615850e-47 |
| Msa0794040 | Msa0797240 | 0.837269 | 5.742005e-57 | -8.615850e-47 |
| Msa0794040 | Msa0800400 | 0.820192 | 7.810965e-53 | -8.615850e-47 |
| Msa0794040 | Msa0804930 | 0.833305 | 5.756853e-56 | -8.615850e-47 |
| Msa0794040 | Msa0812230 | 0.844392 | 7.780053e-59 | -8.615850e-47 |
| Msa0794040 | Msa0821490 | 0.815213 | 1.037250e-51 | -8.615850e-47 |
| Msa0794040 | Msa0822380 | 0.819389 | 1.191378e-52 | -8.615850e-47 |
| Msa0794040 | Msa0834160 | 0.812653 | 3.805338e-51 | -8.615850e-47 |
| Msa0794040 | Msa0835010 | 0.839420 | 1.601358e-57 | -8.615850e-47 |
| Msa0794040 | Msa0839730 | 0.829235 | 5.764745e-55 | -8.615850e-47 |
| Msa0794040 | Msa0844330 | 0.839043 | 2.005882e-57 | -8.615850e-47 |
| Msa0794040 | Msa0844350 | 0.842150 | 3.082081e-58 | -8.615850e-47 |
| Msa0794040 | Msa0850520 | 0.872712 | 2.575580e-67 | -8.615850e-47 |
| Msa0794040 | Msa0852500 | 0.803675 | 3.113288e-49 | -8.615850e-47 |
| Msa0794040 | Msa0855490 | 0.852828 | 3.572779e-61 | -8.615850e-47 |
| Msa0794040 | Msa0860270 | 0.808576 | 2.893702e-50 | -8.615850e-47 |
| Msa0794040 | Msa0866960 | 0.803810 | 2.919046e-49 | -8.615850e-47 |
| Msa0794040 | Msa0870210 | 0.812283 | 4.583300e-51 | -8.615850e-47 |
| Msa0794040 | Msa0875130 | 0.813147 | 2.964801e-51 | -8.615850e-47 |
| Msa0794040 | Msa0894580 | 0.800449 | 1.433630e-48 | -8.615850e-47 |
| Msa0794040 | Msa0897390 | 0.852245 | 5.240215e-61 | -8.615850e-47 |
| Msa0794040 | Msa0907520 | 0.803386 | 3.573056e-49 | -8.615850e-47 |
| Msa0794040 | Msa0923910 | 0.850910 | 1.250679e-60 | -8.615850e-47 |
| Msa0794040 | Msa0976950 | 0.819245 | 1.285214e-52 | -8.615850e-47 |
| Msa0794040 | Msa0978000 | 0.814920 | 1.204638e-51 | -8.615850e-47 |
| Msa0794040 | Msa0981300 | 0.853668 | 2.052806e-61 | -8.615850e-47 |
| Msa0794040 | Msa0981900 | 0.859496 | 3.972275e-63 | -8.615850e-47 |
| Msa0794040 | Msa1016130 | 0.827989 | 1.153567e-54 | -8.615850e-47 |
| Msa0794040 | Msa1020500 | 0.801565 | 8.480160e-49 | -8.615850e-47 |
| Msa0794040 | Msa1024580 | 0.813727 | 2.210561e-51 | -8.615850e-47 |
| Msa0794040 | Msa1025610 | 0.839504 | 1.523235e-57 | -8.615850e-47 |
| Msa0794040 | Msa1030280 | 0.803825 | 2.897290e-49 | -8.615850e-47 |
| Msa0794040 | Msa1031220 | 0.842110 | 3.159188e-58 | -8.615850e-47 |
| Msa0794040 | Msa1041550 | 0.835654 | 1.480008e-56 | -8.615850e-47 |
| Msa0794040 | Msa1049440 | 0.837947 | 3.846515e-57 | -8.615850e-47 |
| Msa0794040 | Msa1051410 | 0.832970 | 6.974053e-56 | -8.615850e-47 |
| Msa0794040 | Msa1079610 | 0.807563 | 4.755710e-50 | -8.615850e-47 |
| Msa0794040 | Msa1081530 | 0.821501 | 3.904677e-53 | -8.615850e-47 |
| Msa0794040 | Msa1084630 | 0.863905 | 1.782523e-64 | -8.615850e-47 |
| Msa0794040 | Msa1108530 | 0.802276 | 6.058535e-49 | -8.615850e-47 |
| Msa0794040 | Msa1122480 | 0.817147 | 3.833506e-52 | -8.615850e-47 |
| Msa0794040 | Msa1123340 | 0.819538 | 1.102253e-52 | -8.615850e-47 |
| Msa0794040 | Msa1124180 | 0.818341 | 2.061623e-52 | -8.615850e-47 |
| Msa0794040 | Msa1124440 | 0.812427 | 4.262500e-51 | -8.615850e-47 |
| Msa0794040 | Msa1125610 | 0.802135 | 6.477042e-49 | -8.615850e-47 |
| Msa0794040 | Msa1130700 | 0.812230 | 4.707930e-51 | -8.615850e-47 |
| Msa0794040 | Msa1132320 | 0.983981 | 2.981453e-159 | -8.615850e-47 |
| Msa0794040 | Msa1132540 | 0.800482 | 1.411608e-48 | -8.615850e-47 |
| Msa0794040 | Msa1157160 | 0.819419 | 1.172757e-52 | -8.615850e-47 |
| Msa0794040 | Msa1166450 | 0.839715 | 1.342022e-57 | -8.615850e-47 |
| Msa0794040 | Msa1168130 | 0.802089 | 6.620727e-49 | -8.615850e-47 |
| Msa0794040 | Msa1173410 | 0.866742 | 2.281823e-65 | -8.615850e-47 |
| Msa0794040 | Msa1175970 | 0.822173 | 2.728910e-53 | -8.615850e-47 |
| Msa0794040 | Msa1179680 | 0.855669 | 5.403252e-62 | -8.615850e-47 |
| Msa0794040 | Msa1182950 | 0.809838 | 1.552516e-50 | -8.615850e-47 |
| Msa0794040 | Msa1182960 | 0.839108 | 1.930089e-57 | -8.615850e-47 |
| Msa0794040 | Msa1188380 | 0.823140 | 1.626256e-53 | -8.615850e-47 |
| Msa0794040 | Msa1195860 | 0.842764 | 2.119070e-58 | -8.615850e-47 |
| Msa0794040 | Msa1198420 | 0.820829 | 5.577076e-53 | -8.615850e-47 |
| Msa0794040 | Msa1199690 | 0.840452 | 8.619883e-58 | -8.615850e-47 |
| Msa0794040 | Msa1201610 | 0.829943 | 3.879423e-55 | -8.615850e-47 |
| Msa0794040 | Msa1203090 | 0.867878 | 9.889393e-66 | -8.615850e-47 |
| Msa0794040 | Msa1204110 | 0.803571 | 3.270801e-49 | -8.615850e-47 |
| Msa0794040 | Msa1208250 | 0.805078 | 1.587780e-49 | -8.615850e-47 |
| Msa0794040 | Msa1209900 | 0.802434 | 5.621418e-49 | -8.615850e-47 |
| Msa0794040 | Msa1211100 | 0.803151 | 3.996512e-49 | -8.615850e-47 |
| Msa0794040 | Msa1211120 | 0.807974 | 3.889595e-50 | -8.615850e-47 |
| Msa0794040 | Msa1211880 | 0.829725 | 4.383825e-55 | -8.615850e-47 |
| Msa0794040 | Msa1213170 | 0.818910 | 1.532025e-52 | -8.615850e-47 |
| Msa0794040 | Msa1215660 | 0.820964 | 5.192917e-53 | -8.615850e-47 |
| Msa0794040 | Msa1218720 | 0.833872 | 4.155978e-56 | -8.615850e-47 |
| Msa0794040 | Msa1221370 | 0.837685 | 4.492843e-57 | -8.615850e-47 |
| Msa0794040 | Msa1224150 | 0.809979 | 1.447549e-50 | -8.615850e-47 |
| Msa0794040 | Msa1224690 | 0.814448 | 1.532833e-51 | -8.615850e-47 |
| Msa0794040 | Msa1226330 | 0.800552 | 1.366202e-48 | -8.615850e-47 |
| Msa0794040 | Msa1231520 | 0.813882 | 2.043313e-51 | -8.615850e-47 |
| Msa0794040 | Msa1232640 | 0.868958 | 4.432403e-66 | -8.615850e-47 |
| Msa0794040 | Msa1235050 | 0.843432 | 1.406308e-58 | -8.615850e-47 |
| Msa0794040 | Msa1242430 | 0.830423 | 2.961200e-55 | -8.615850e-47 |
| Msa0794040 | Msa1246420 | 0.817415 | 3.336987e-52 | -8.615850e-47 |
| Msa0794040 | Msa1248400 | 0.844013 | 9.829490e-59 | -8.615850e-47 |
| Msa0794040 | Msa1252040 | 0.842651 | 2.270406e-58 | -8.615850e-47 |
| Msa0794040 | Msa1254470 | 0.810272 | 1.251517e-50 | -8.615850e-47 |
| Msa0794040 | Msa1264230 | 0.870471 | 1.423615e-66 | -8.615850e-47 |
| Msa0794040 | Msa1265250 | 0.839584 | 1.451839e-57 | -8.615850e-47 |
| Msa0794040 | Msa1266650 | 0.818154 | 2.272853e-52 | -8.615850e-47 |
| Msa0794040 | Msa1267800 | 0.813635 | 2.316651e-51 | -8.615850e-47 |
| Msa0794040 | Msa1289340 | 0.839509 | 1.518536e-57 | -8.615850e-47 |
| Msa0794040 | Msa1294520 | 0.845074 | 5.095781e-59 | -8.615850e-47 |
| Msa0794040 | Msa1300120 | 0.815206 | 1.040848e-51 | -8.615850e-47 |
| Msa0794040 | Msa1302920 | 0.874609 | 5.906160e-68 | -8.615850e-47 |
| Msa0794040 | Msa1309910 | 0.838281 | 3.156271e-57 | -8.615850e-47 |
| Msa0794040 | Msa1310260 | 0.806029 | 1.003159e-49 | -8.615850e-47 |
| Msa0794040 | Msa1313230 | 0.824360 | 8.419319e-54 | -8.615850e-47 |
| Msa0794040 | Msa1316160 | 0.868490 | 6.279873e-66 | -8.615850e-47 |
| Msa0794040 | Msa1323920 | 0.801322 | 9.510809e-49 | -8.615850e-47 |
| Msa0794040 | Msa1327820 | 0.813898 | 2.026808e-51 | -8.615850e-47 |
| Msa0794040 | Msa1331900 | 0.804919 | 1.714166e-49 | -8.615850e-47 |
| Msa0794040 | Msa1332180 | 0.848318 | 6.617056e-60 | -8.615850e-47 |
| Msa0794040 | Msa1333430 | 0.802974 | 4.348389e-49 | -8.615850e-47 |
| Msa0794040 | Msa1336350 | 0.810450 | 1.145678e-50 | -8.615850e-47 |
| Msa0794040 | Msa1337520 | 0.829164 | 5.999185e-55 | -8.615850e-47 |
| Msa0794040 | Msa1342730 | 0.813399 | 2.610045e-51 | -8.615850e-47 |
| Msa0794040 | Msa1343540 | 0.846900 | 1.624579e-59 | -8.615850e-47 |
| Msa0794040 | Msa1350030 | 0.818155 | 2.272107e-52 | -8.615850e-47 |
| Msa0794040 | Msa1351560 | 0.869548 | 2.851285e-66 | -8.615850e-47 |
| Msa0794040 | Msa1357380 | 0.807954 | 3.927952e-50 | -8.615850e-47 |
| Msa0794040 | Msa1357720 | 0.834668 | 2.624112e-56 | -8.615850e-47 |
| Msa0794040 | Msa1366700 | 0.807478 | 4.956987e-50 | -8.615850e-47 |
| Msa0794040 | Msa1368730 | 0.803115 | 4.066445e-49 | -8.615850e-47 |
| Msa0794040 | Msa1370830 | 0.801718 | 7.887463e-49 | -8.615850e-47 |
| Msa0794040 | Msa1371250 | 0.834620 | 2.697772e-56 | -8.615850e-47 |
| Msa0794040 | Msa1372340 | 0.841562 | 4.408294e-58 | -8.615850e-47 |
| Msa0794040 | Msa1373590 | 0.868186 | 7.872399e-66 | -8.615850e-47 |
| Msa0794040 | Msa1374810 | 0.805933 | 1.050933e-49 | -8.615850e-47 |
| Msa0794040 | Msa1377170 | 0.820528 | 6.540503e-53 | -8.615850e-47 |
| Msa0794040 | Msa1385940 | 0.849788 | 2.581782e-60 | -8.615850e-47 |
| Msa0794040 | Msa1388230 | 0.819627 | 1.051665e-52 | -8.615850e-47 |
| Msa0794040 | Msa1393600 | 0.854191 | 1.450354e-61 | -8.615850e-47 |
| Msa0794040 | Msa1394090 | 0.801991 | 6.934842e-49 | -8.615850e-47 |
| Msa0794040 | Msa1400330 | 0.863765 | 1.971300e-64 | -8.615850e-47 |
| Msa0794040 | Msa1400600 | 0.875270 | 3.517561e-68 | -8.615850e-47 |
| Msa0794040 | Msa1405470 | 0.818754 | 1.662278e-52 | -8.615850e-47 |
| Msa0794040 | Msa1409050 | 0.801877 | 7.317308e-49 | -8.615850e-47 |
| Msa0794040 | Msa1414830 | 0.806829 | 6.800700e-50 | -8.615850e-47 |
| Msa0794040 | Msa1415120 | 0.885408 | 8.341368e-72 | -8.615850e-47 |
| Msa0794040 | Msa1419040 | 0.840381 | 9.000491e-58 | -8.615850e-47 |
| Msa0794040 | Msa1422750 | 0.838838 | 2.267297e-57 | -8.615850e-47 |
| Msa0794040 | Msa1425600 | 0.803680 | 3.105801e-49 | -8.615850e-47 |
| Msa0794040 | Msa1433650 | 0.824591 | 7.428848e-54 | -8.615850e-47 |
| Msa0794040 | Msa1438420 | 0.839663 | 1.384676e-57 | -8.615850e-47 |
| Msa0794040 | Msa1439160 | 0.851504 | 8.503033e-61 | -8.615850e-47 |
| Msa0794040 | Msa1451840 | 0.806078 | 9.797118e-50 | -8.615850e-47 |
| Msa0794040 | Msa1452200 | 0.800675 | 1.289643e-48 | -8.615850e-47 |
| Msa0794040 | Msa1454940 | 0.808351 | 3.232121e-50 | -8.615850e-47 |
| Msa0122540 | Msa0794040 | 0.822774 | 1.978258e-53 | -8.615850e-47 |
| Msa0124310 | Msa0794040 | 0.806666 | 7.361957e-50 | -8.615850e-47 |
| Msa0130120 | Msa0794040 | 0.864338 | 1.306436e-64 | -8.615850e-47 |
| Msa0133670 | Msa0794040 | 0.854077 | 1.564428e-61 | -8.615850e-47 |
| Msa0133880 | Msa0794040 | 0.857624 | 1.437604e-62 | -8.615850e-47 |
| Msa0134550 | Msa0794040 | 0.848376 | 6.374638e-60 | -8.615850e-47 |
| Msa0138380 | Msa0794040 | 0.803150 | 3.999531e-49 | -8.615850e-47 |
| Msa0139740 | Msa0794040 | 0.816459 | 5.470708e-52 | -8.615850e-47 |
| Msa0143210 | Msa0794040 | 0.810691 | 1.016231e-50 | -8.615850e-47 |
| Msa0144510 | Msa0794040 | 0.804216 | 2.402337e-49 | -8.615850e-47 |
| Msa0156780 | Msa0794040 | 0.822639 | 2.127551e-53 | -8.615850e-47 |
| Msa0163500 | Msa0794040 | 0.805173 | 1.516745e-49 | -8.615850e-47 |
| Msa0165740 | Msa0794040 | 0.817351 | 3.450371e-52 | -8.615850e-47 |
| Msa0166580 | Msa0794040 | 0.826369 | 2.816726e-54 | -8.615850e-47 |
| Msa0169960 | Msa0794040 | 0.810649 | 1.037600e-50 | -8.615850e-47 |
| Msa0175480 | Msa0794040 | 0.857347 | 1.736180e-62 | -8.615850e-47 |
| Msa0175900 | Msa0794040 | 0.845893 | 3.057205e-59 | -8.615850e-47 |
| Msa0181290 | Msa0794040 | 0.833274 | 5.858967e-56 | -8.615850e-47 |
| Msa0181740 | Msa0794040 | 0.815152 | 1.070459e-51 | -8.615850e-47 |
| Msa0184120 | Msa0794040 | 0.853383 | 2.477311e-61 | -8.615850e-47 |
| Msa0186750 | Msa0794040 | 0.809244 | 2.082715e-50 | -8.615850e-47 |
| Msa0187720 | Msa0794040 | 0.829523 | 4.908201e-55 | -8.615850e-47 |
| Msa0190710 | Msa0794040 | 0.806202 | 9.224837e-50 | -8.615850e-47 |
| Msa0201910 | Msa0794040 | 0.815230 | 1.028305e-51 | -8.615850e-47 |
| Msa0206600 | Msa0794040 | 0.810182 | 1.309098e-50 | -8.615850e-47 |
| Msa0207220 | Msa0794040 | 0.817153 | 3.822850e-52 | -8.615850e-47 |
| Msa0207530 | Msa0794040 | 0.871449 | 6.778588e-67 | -8.615850e-47 |
| Msa0207900 | Msa0794040 | 0.866800 | 2.186930e-65 | -8.615850e-47 |
| Msa0207990 | Msa0794040 | 0.836964 | 6.873131e-57 | -8.615850e-47 |
| Msa0216010 | Msa0794040 | 0.909024 | 8.987122e-82 | -8.615850e-47 |
| Msa0216560 | Msa0794040 | 0.828655 | 7.967547e-55 | -8.615850e-47 |
| Msa0218480 | Msa0794040 | 0.845717 | 3.411955e-59 | -8.615850e-47 |
| Msa0218590 | Msa0794040 | 0.845852 | 3.136229e-59 | -8.615850e-47 |
| Msa0222510 | Msa0794040 | 0.868010 | 8.971407e-66 | -8.615850e-47 |
| Msa0222720 | Msa0794040 | 0.814447 | 1.533630e-51 | -8.615850e-47 |
| Msa0232290 | Msa0794040 | 0.840094 | 1.069329e-57 | -8.615850e-47 |
| Msa0369750 | Msa0794040 | 0.869309 | 3.409599e-66 | -8.615850e-47 |
| Msa0370510 | Msa0794040 | 0.820791 | 5.691865e-53 | -8.615850e-47 |
| Msa0371620 | Msa0794040 | 0.824991 | 5.978286e-54 | -8.615850e-47 |
| Msa0372350 | Msa0794040 | 0.806391 | 8.416476e-50 | -8.615850e-47 |
| Msa0372380 | Msa0794040 | 0.821754 | 3.413010e-53 | -8.615850e-47 |
| Msa0377460 | Msa0794040 | 0.875812 | 2.294062e-68 | -8.615850e-47 |
| Msa0377690 | Msa0794040 | 0.802674 | 5.015998e-49 | -8.615850e-47 |
| Msa0379720 | Msa0794040 | 0.808636 | 2.810249e-50 | -8.615850e-47 |
| Msa0381370 | Msa0794040 | 0.867336 | 1.475467e-65 | -8.615850e-47 |
| Msa0390950 | Msa0794040 | 0.853225 | 2.749624e-61 | -8.615850e-47 |
| Msa0392480 | Msa0794040 | 0.804429 | 2.169887e-49 | -8.615850e-47 |
| Msa0403670 | Msa0794040 | 0.806501 | 7.978876e-50 | -8.615850e-47 |
| Msa0404860 | Msa0794040 | 0.803901 | 2.794371e-49 | -8.615850e-47 |
| Msa0404870 | Msa0794040 | 0.837191 | 6.013605e-57 | -8.615850e-47 |
| Msa0405040 | Msa0794040 | 0.809715 | 1.650205e-50 | -8.615850e-47 |
| Msa0416990 | Msa0794040 | 0.829555 | 4.820789e-55 | -8.615850e-47 |
| Msa0417000 | Msa0794040 | 0.800907 | 1.156528e-48 | -8.615850e-47 |
| Msa0417130 | Msa0794040 | 0.839056 | 1.990891e-57 | -8.615850e-47 |
| Msa0420080 | Msa0794040 | 0.860959 | 1.435055e-63 | -8.615850e-47 |
| Msa0421100 | Msa0794040 | 0.802993 | 4.308994e-49 | -8.615850e-47 |
| Msa0422520 | Msa0794040 | 0.868079 | 8.521077e-66 | -8.615850e-47 |
| Msa0426680 | Msa0794040 | 0.821705 | 3.503108e-53 | -8.615850e-47 |
| Msa0426860 | Msa0794040 | 0.842063 | 3.250205e-58 | -8.615850e-47 |
| Msa0426890 | Msa0794040 | 0.862137 | 6.268276e-64 | -8.615850e-47 |
| Msa0426990 | Msa0794040 | 0.824441 | 8.059602e-54 | -8.615850e-47 |
| Msa0427050 | Msa0794040 | 0.820399 | 7.002168e-53 | -8.615850e-47 |
| Msa0429100 | Msa0794040 | 0.822975 | 1.776782e-53 | -8.615850e-47 |
| Msa0429130 | Msa0794040 | 0.826375 | 2.807525e-54 | -8.615850e-47 |
| Msa0451370 | Msa0794040 | 0.806006 | 1.014309e-49 | -8.615850e-47 |
| Msa0456480 | Msa0794040 | 0.806903 | 6.561033e-50 | -8.615850e-47 |
| Msa0463580 | Msa0794040 | 0.822209 | 2.677081e-53 | -8.615850e-47 |
| Msa0463960 | Msa0794040 | 0.866962 | 1.942474e-65 | -8.615850e-47 |
| Msa0464500 | Msa0794040 | 0.810928 | 9.033446e-51 | -8.615850e-47 |
| Msa0466090 | Msa0794040 | 0.829384 | 5.305881e-55 | -8.615850e-47 |
| Msa0473320 | Msa0794040 | 0.864429 | 1.223396e-64 | -8.615850e-47 |
| Msa0473450 | Msa0794040 | 0.838874 | 2.218672e-57 | -8.615850e-47 |
| Msa0475360 | Msa0794040 | 0.814513 | 1.482713e-51 | -8.615850e-47 |
| Msa0475830 | Msa0794040 | 0.829725 | 4.383319e-55 | -8.615850e-47 |
| Msa0477070 | Msa0794040 | 0.803121 | 4.054486e-49 | -8.615850e-47 |
| Msa0482580 | Msa0794040 | 0.856765 | 2.577884e-62 | -8.615850e-47 |
| Msa0240460 | Msa0794040 | 0.805207 | 1.492521e-49 | -8.615850e-47 |
| Msa0244370 | Msa0794040 | 0.800368 | 1.489069e-48 | -8.615850e-47 |
| Msa0256170 | Msa0794040 | 0.902536 | 8.767571e-79 | -8.615850e-47 |
| Msa0261200 | Msa0794040 | 0.809853 | 1.541040e-50 | -8.615850e-47 |
| Msa0264020 | Msa0794040 | 0.818866 | 1.567106e-52 | -8.615850e-47 |
| Msa0270610 | Msa0794040 | 0.819623 | 1.053891e-52 | -8.615850e-47 |
| Msa0271740 | Msa0794040 | 0.842613 | 2.323741e-58 | -8.615850e-47 |
| Msa0282880 | Msa0794040 | 0.814036 | 1.889712e-51 | -8.615850e-47 |
| Msa0285710 | Msa0794040 | 0.804717 | 1.889594e-49 | -8.615850e-47 |
| Msa0288280 | Msa0794040 | 0.813776 | 2.156823e-51 | -8.615850e-47 |
| Msa0295840 | Msa0794040 | 0.823960 | 1.045225e-53 | -8.615850e-47 |
| Msa0298590 | Msa0794040 | 0.820839 | 5.549280e-53 | -8.615850e-47 |
| Msa0301800 | Msa0794040 | 0.879932 | 8.316548e-70 | -8.615850e-47 |
| Msa0302020 | Msa0794040 | 0.808193 | 3.493545e-50 | -8.615850e-47 |
| Msa0306130 | Msa0794040 | 0.816421 | 5.579323e-52 | -8.615850e-47 |
| Msa0307490 | Msa0794040 | 0.823401 | 1.413090e-53 | -8.615850e-47 |
| Msa0310380 | Msa0794040 | 0.841981 | 3.416236e-58 | -8.615850e-47 |
| Msa0310490 | Msa0794040 | 0.802928 | 4.444083e-49 | -8.615850e-47 |
| Msa0313050 | Msa0794040 | -0.807591 | 4.689911e-50 | -8.615850e-47 |
| Msa0321180 | Msa0794040 | 0.801454 | 8.934263e-49 | -8.615850e-47 |
| Msa0321200 | Msa0794040 | 0.805092 | 1.577539e-49 | -8.615850e-47 |
| Msa0338570 | Msa0794040 | 0.815122 | 1.086568e-51 | -8.615850e-47 |
| Msa0358710 | Msa0794040 | 0.841538 | 4.471434e-58 | -8.615850e-47 |
| Msa0486870 | Msa0794040 | 0.803050 | 4.193394e-49 | -8.615850e-47 |
| Msa0487620 | Msa0794040 | 0.803853 | 2.859416e-49 | -8.615850e-47 |
| Msa0493640 | Msa0794040 | 0.805939 | 1.047677e-49 | -8.615850e-47 |
| Msa0509350 | Msa0794040 | 0.810043 | 1.402203e-50 | -8.615850e-47 |
| Msa0509500 | Msa0794040 | 0.849498 | 3.111510e-60 | -8.615850e-47 |
| Msa0509510 | Msa0794040 | 0.855860 | 4.751172e-62 | -8.615850e-47 |
| Msa0511910 | Msa0794040 | 0.833292 | 5.799087e-56 | -8.615850e-47 |
| Msa0512770 | Msa0794040 | 0.827756 | 1.312017e-54 | -8.615850e-47 |
| Msa0517400 | Msa0794040 | 0.876794 | 1.051937e-68 | -8.615850e-47 |
| Msa0521440 | Msa0794040 | 0.802309 | 5.965192e-49 | -8.615850e-47 |
| Msa0545910 | Msa0794040 | 0.845490 | 3.931679e-59 | -8.615850e-47 |
| Msa0558890 | Msa0794040 | 0.820059 | 8.376249e-53 | -8.615850e-47 |
| Msa0568490 | Msa0794040 | 0.827622 | 1.413568e-54 | -8.615850e-47 |
| Msa0569630 | Msa0794040 | 0.821280 | 4.390468e-53 | -8.615850e-47 |
| Msa0574230 | Msa0794040 | 0.826975 | 2.019446e-54 | -8.615850e-47 |
| Msa0576510 | Msa0794040 | 0.823870 | 1.097633e-53 | -8.615850e-47 |
| Msa0577140 | Msa0794040 | 0.823177 | 1.593657e-53 | -8.615850e-47 |
| Msa0581440 | Msa0794040 | 0.855862 | 4.744331e-62 | -8.615850e-47 |
| Msa0587060 | Msa0794040 | 0.820045 | 8.439904e-53 | -8.615850e-47 |
| Msa0595240 | Msa0794040 | 0.816324 | 5.864512e-52 | -8.615850e-47 |
| Msa0601710 | Msa0794040 | 0.848944 | 4.436512e-60 | -8.615850e-47 |
| Msa0601780 | Msa0794040 | 0.800775 | 1.230124e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794040 | MtrunA17_Chr5g0395051 | 91.459 | 761 | 47 | 2 | 1 | 743 | 1 | 761 | 0.0 | 1415 |
| Msa0794040 | MtrunA17_Chr6g0468281 | 83.247 | 388 | 26 | 3 | 356 | 743 | 1 | 349 | 0.0 | 645 |
| Msa0794040 | MtrunA17_Chr6g0468301 | 91.250 | 160 | 11 | 1 | 1 | 157 | 1 | 160 | 1.85e-97 | 298 |
| Msa0794040 | MtrunA17_Chr6g0468291 | 95.918 | 98 | 4 | 0 | 224 | 321 | 1 | 98 | 6.75e-58 | 192 |
| Msa0794040 | MtrunA17_Chr1g0187091 | 35.315 | 286 | 141 | 9 | 91 | 362 | 207 | 462 | 9.07e-29 | 121 |
| Msa0794040 | MtrunA17_Chr1g0187091 | 49.038 | 104 | 44 | 2 | 9 | 103 | 1 | 104 | 6.10e-21 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0794040 | AT5G43630.2 | 30.700 | 671 | 346 | 24 | 31 | 619 | 25 | 658 | 4.10e-58 | 212 |
| Msa0794040 | AT5G43630.4 | 30.700 | 671 | 346 | 24 | 31 | 619 | 25 | 658 | 4.10e-58 | 212 |
| Msa0794040 | AT5G43630.3 | 30.700 | 671 | 346 | 24 | 31 | 619 | 25 | 658 | 4.10e-58 | 212 |
| Msa0794040 | AT5G43630.1 | 30.700 | 671 | 346 | 24 | 31 | 619 | 25 | 658 | 4.10e-58 | 212 |
Find 184 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACAAACAATTTGAGTTTA+TGG | 0.087237 | 5_3:-5849534 | Msa0794040:five_prime_UTR |
| TAGTAGCAATTTCACCTTTA+AGG | 0.091636 | 5_3:-5845502 | Msa0794040:three_prime_UTR |
| TCCTCAAAACCACTGGATTT+TGG | 0.157505 | 5_3:+5847279 | None:intergenic |
| GACTCCCTGGATTGTCTTTC+CGG | 0.170908 | 5_3:+5847322 | None:intergenic |
| TCCCCACTTATTCACCTTAA+AGG | 0.181610 | 5_3:+5845488 | None:intergenic |
| ATCTCTGGAAAACAGGTTAT+TGG | 0.246005 | 5_3:+5847633 | None:intergenic |
| AAATTTAAAGGTTCAATATT+AGG | 0.247779 | 5_3:+5847531 | None:intergenic |
| GAGCCTTTGTATTCAGTTAC+AGG | 0.247973 | 5_3:+5848371 | None:intergenic |
| TTCTTGTTTAATGTAGGATT+TGG | 0.271583 | 5_3:+5847962 | None:intergenic |
| TCTATTGCTCAATTACATTA+AGG | 0.274904 | 5_3:-5846485 | Msa0794040:three_prime_UTR |
| AGATGAACCTAAACCTATTA+TGG | 0.280334 | 5_3:-5848462 | Msa0794040:CDS |
| AACCATGCATTATGAAGATT+TGG | 0.280576 | 5_3:+5847846 | None:intergenic |
| AGCAGTTGATCCTTGTTGTT+TGG | 0.302468 | 5_3:-5849626 | Msa0794040:five_prime_UTR |
| TTTAATTCAACAAGTTGAAT+TGG | 0.307502 | 5_3:+5849658 | None:intergenic |
| AGGCTTGCATTACTTACTTC+AGG | 0.307514 | 5_3:+5846551 | None:intergenic |
| TGAACATATACTTCAACTTT+TGG | 0.308816 | 5_3:+5847238 | None:intergenic |
| ATCATAATTTATGCCTTCAT+TGG | 0.310698 | 5_3:+5848412 | None:intergenic |
| TTAGTTTGGTCTTCAGATAA+AGG | 0.312924 | 5_3:-5848757 | Msa0794040:CDS |
| AAACATTTAATGCACATAAA+AGG | 0.319178 | 5_3:+5846967 | None:intergenic |
| AAGAGTTCACTATCAGTCTT+TGG | 0.323107 | 5_3:+5848886 | None:intergenic |
| TGCGCCTGCGGCTTGGGAAG+TGG | 0.328935 | 5_3:-5846348 | Msa0794040:three_prime_UTR |
| AAGTGAGCTAGAAGATCTTC+AGG | 0.335373 | 5_3:-5847025 | Msa0794040:CDS |
| TTTACTTGTGAGGTACATTC+TGG | 0.345896 | 5_3:+5847111 | None:intergenic |
| ATCCTCTTTCCGAATTAGTT+TGG | 0.351970 | 5_3:-5848771 | Msa0794040:CDS |
| CTTCTCTAAACTATGTTTCT+CGG | 0.353124 | 5_3:+5846148 | None:intergenic |
| TCATTGGGAGGCCTCCTTGA+TGG | 0.355832 | 5_3:+5848428 | None:intergenic |
| CTTGGCGTTTATAACGTCAT+TGG | 0.358095 | 5_3:+5846747 | None:intergenic |
| CCATGTACAGTGTTATTACT+TGG | 0.358661 | 5_3:+5847669 | None:intergenic |
| AAGAAAGCTCATTCAGAAAC+TGG | 0.360229 | 5_3:-5847944 | Msa0794040:CDS |
| ATTGAAAATGCCGTTTGTTA+AGG | 0.362224 | 5_3:+5847604 | None:intergenic |
| AACATTTCTTAAATCATTCT+CGG | 0.363507 | 5_3:+5848283 | None:intergenic |
| GTTAGCTATGAAGCTATGTT+TGG | 0.365032 | 5_3:-5849504 | Msa0794040:five_prime_UTR |
| ATCTGAAGACCAAACTAATT+CGG | 0.365396 | 5_3:+5848762 | None:intergenic |
| TACCTCAAGAAAATCTTGAT+TGG | 0.368233 | 5_3:+5846058 | None:intergenic |
| TTCTTCATGACAAATCTTCA+TGG | 0.368746 | 5_3:+5849599 | None:intergenic |
| GAAGGCATAAATTATGATAC+TGG | 0.375310 | 5_3:-5848407 | Msa0794040:CDS |
| CCGGTCTTGCAGTCCCTTCA+TGG | 0.379731 | 5_3:+5846866 | None:intergenic |
| AGGTGAATAAGTGGGGAATC+CGG | 0.381843 | 5_3:-5845482 | Msa0794040:three_prime_UTR |
| TTCAAACTTGTGCCTTAGTA+AGG | 0.384377 | 5_3:-5847457 | Msa0794040:CDS |
| AAGACAATCCAGGGAGTCTA+TGG | 0.386401 | 5_3:-5847317 | Msa0794040:CDS |
| CGGCTTGGGAAGTGGGAAGA+AGG | 0.393299 | 5_3:-5846340 | Msa0794040:three_prime_UTR |
| ATCGACAATGAAGAAACTTC+TGG | 0.405788 | 5_3:-5847987 | Msa0794040:CDS |
| TATCCAAGTTTGAAGAATAT+AGG | 0.406340 | 5_3:-5847738 | Msa0794040:CDS |
| GCAATTGATCTCTGGAAAAC+AGG | 0.406472 | 5_3:+5847626 | None:intergenic |
| TCTCAACAGCAGTTGATGAT+TGG | 0.410588 | 5_3:-5848026 | Msa0794040:CDS |
| ATTCTCTGCTTTCTTTCTCT+CGG | 0.414942 | 5_3:+5847353 | None:intergenic |
| ATTTGCATCCCCATCTGATA+AGG | 0.416235 | 5_3:+5848139 | None:intergenic |
| GGTGAATAAGTGGGGAATCC+GGG | 0.418329 | 5_3:-5845481 | Msa0794040:three_prime_UTR |
| ATAATATATACATGCACAAC+TGG | 0.419783 | 5_3:-5845265 | Msa0794040:three_prime_UTR |
| TTAGACAACAAGCTTATGAA+TGG | 0.421752 | 5_3:+5849554 | None:intergenic |
| GCGCCTGCGGCTTGGGAAGT+GGG | 0.434123 | 5_3:-5846347 | Msa0794040:three_prime_UTR |
| TATAACATCTCCGTCGAGAT+TGG | 0.435268 | 5_3:-5846650 | Msa0794040:CDS |
| CTCAACAGCAGTTGATGATT+GGG | 0.436500 | 5_3:-5848025 | Msa0794040:CDS |
| TTGTTAAGGCAATTGATCTC+TGG | 0.437536 | 5_3:+5847618 | None:intergenic |
| CTTTCTCTCGGATGGTGCGT+TGG | 0.438518 | 5_3:+5847365 | None:intergenic |
| TAGTAAGGACAAGGAAGAAA+TGG | 0.439540 | 5_3:-5847442 | Msa0794040:CDS |
| TCTGCTTTCTTTCTCTCGGA+TGG | 0.440615 | 5_3:+5847357 | None:intergenic |
| ATGTCACGGTATAAGTTAGT+AGG | 0.442792 | 5_3:+5846531 | None:intergenic |
| CTCGACGGAGATGTTATACT+AGG | 0.443437 | 5_3:+5846655 | None:intergenic |
| GAAGAAGGGCTTGGAGGAAC+TGG | 0.447576 | 5_3:-5846325 | Msa0794040:three_prime_UTR |
| TACAAAGGCTCTGGTGCTGC+AGG | 0.449475 | 5_3:-5848359 | Msa0794040:CDS |
| CTCATCTTCCTCAAAACCAC+TGG | 0.450177 | 5_3:+5847272 | None:intergenic |
| AACGACACTACCTTGCGTTA+AGG | 0.450935 | 5_3:-5848231 | Msa0794040:CDS |
| AATCTCTCTCAGTGAAAGTA+GGG | 0.456729 | 5_3:-5846115 | Msa0794040:three_prime_UTR |
| TGTAAATTCATATGAAGGTC+CGG | 0.457030 | 5_3:-5846998 | Msa0794040:CDS |
| TGATGCATTGCATTCTATCT+TGG | 0.457149 | 5_3:+5846729 | None:intergenic |
| TCATAATTTATGCCTTCATT+GGG | 0.458322 | 5_3:+5848413 | None:intergenic |
| GTTCCTATATTCTTCAAACT+TGG | 0.462575 | 5_3:+5847735 | None:intergenic |
| TTACATGGAGAATGCAAAAC+AGG | 0.463584 | 5_3:+5848203 | None:intergenic |
| TGAGCTTTCTTGTTTAATGT+AGG | 0.464135 | 5_3:+5847956 | None:intergenic |
| AAATCTCTCTCAGTGAAAGT+AGG | 0.468291 | 5_3:-5846116 | Msa0794040:three_prime_UTR |
| TTTCTTCCTTGTCCTTACTA+AGG | 0.468637 | 5_3:+5847445 | None:intergenic |
| CTTCCCACTTCCCAAGCCGC+AGG | 0.470117 | 5_3:+5846344 | None:intergenic |
| ACGTTTGCAAGGAGATTTGT+TGG | 0.471483 | 5_3:-5847162 | Msa0794040:CDS |
| TTTATCAGCAAAGCTTGAAT+CGG | 0.474036 | 5_3:+5848717 | None:intergenic |
| TGATGCTGAAAACAAATATG+AGG | 0.475122 | 5_3:-5848261 | Msa0794040:CDS |
| ATTCACAAACTCGGAGCAAA+TGG | 0.479748 | 5_3:-5847190 | Msa0794040:CDS |
| GGGAAGTGGGAAGAAGGGCT+TGG | 0.479926 | 5_3:-5846334 | Msa0794040:three_prime_UTR |
| CTTCAAACTTGGATAATACA+TGG | 0.480740 | 5_3:+5847746 | None:intergenic |
| CCAAGTAATAACACTGTACA+TGG | 0.482380 | 5_3:-5847669 | Msa0794040:CDS |
| CGAGTTATCCATAGACTCCC+TGG | 0.491615 | 5_3:+5847309 | None:intergenic |
| TCAAGGAGGCCTCCCAATGA+AGG | 0.494185 | 5_3:-5848425 | Msa0794040:CDS |
| TTGAAAGCTGTAACAGTGCT+AGG | 0.495098 | 5_3:-5848079 | Msa0794040:CDS |
| TGAATTGCTGTCATTATCCA+TGG | 0.498749 | 5_3:+5848106 | None:intergenic |
| GATATCAGATCTTCTTCAGA+TGG | 0.499851 | 5_3:+5845586 | None:intergenic |
| CTTCTCCACTCATCTTCAGA+AGG | 0.500514 | 5_3:+5848926 | None:intergenic |
| GTACATTCTGGTTTGTCTGT+CGG | 0.500733 | 5_3:+5847123 | None:intergenic |
| CCATGAAGGGACTGCAAGAC+CGG | 0.501023 | 5_3:-5846866 | Msa0794040:CDS |
| TCACCTTTAAGGTGAATAAG+TGG | 0.501710 | 5_3:-5845491 | Msa0794040:three_prime_UTR |
| TATGAAGATTTGGATTTGCA+AGG | 0.503391 | 5_3:+5847856 | None:intergenic |
| GAAAATGTAAATTCATATGA+AGG | 0.504472 | 5_3:-5847003 | Msa0794040:CDS |
| ATCCAAATCTTCATAATGCA+TGG | 0.507310 | 5_3:-5847848 | Msa0794040:CDS |
| TTACTTCAGGATGTCGGTGC+GGG | 0.508749 | 5_3:+5846564 | None:intergenic |
| GTCAAAACCTTTGTCCATGA+AGG | 0.509754 | 5_3:-5846880 | Msa0794040:CDS |
| CACCTTTAAGGTGAATAAGT+GGG | 0.509973 | 5_3:-5845490 | Msa0794040:three_prime_UTR |
| AACACTTGGTAAAAGACTAA+AGG | 0.513176 | 5_3:+5845387 | None:intergenic |
| TCTGCCTTGTCAATCTGCAC+CGG | 0.520768 | 5_3:+5846847 | None:intergenic |
| GGATTTCAAGCATGGTGAAA+GGG | 0.521068 | 5_3:-5847923 | Msa0794040:CDS |
| GTAACTGAATACAAAGGCTC+TGG | 0.523768 | 5_3:-5848368 | Msa0794040:CDS |
| TACAGTTAGTGTGTAGCAGA+TGG | 0.524023 | 5_3:-5846414 | Msa0794040:three_prime_UTR |
| GGCTTGGGAAGTGGGAAGAA+GGG | 0.526914 | 5_3:-5846339 | Msa0794040:three_prime_UTR |
| CTCAACACCTGCTTCTGAGT+TGG | 0.528426 | 5_3:+5845612 | None:intergenic |
| CTGTCGGCATGATATGTTTG+AGG | 0.529117 | 5_3:+5847139 | None:intergenic |
| TGCAAATGTAAGATTATCCA+TGG | 0.529365 | 5_3:-5848123 | Msa0794040:CDS |
| GACCAAACTAATTCGGAAAG+AGG | 0.530007 | 5_3:+5848769 | None:intergenic |
| TTCTATAGGATTCCTGCTGG+AGG | 0.530141 | 5_3:+5848322 | None:intergenic |
| CTGCAGATCAGGTTGATCAA+AGG | 0.530764 | 5_3:-5848511 | Msa0794040:intron |
| TGCAGTCCCTTCATGGACAA+AGG | 0.530820 | 5_3:+5846873 | None:intergenic |
| CAGAAACTGGATTTCAAGCA+TGG | 0.531557 | 5_3:-5847931 | Msa0794040:CDS |
| AGCAGATGGGTAACTGCTCA+TGG | 0.531563 | 5_3:-5846400 | Msa0794040:three_prime_UTR |
| ATAACGCTGACCAGTGCGAT+TGG | 0.531960 | 5_3:-5848858 | Msa0794040:CDS |
| ACAAGAATGTTTCATCAAGA+AGG | 0.536595 | 5_3:-5847714 | Msa0794040:CDS |
| AGATCAATTGCCTTAACAAA+CGG | 0.537737 | 5_3:-5847614 | Msa0794040:CDS |
| TTAAAGGTGAAATTGCTACT+AGG | 0.537925 | 5_3:+5845504 | None:intergenic |
| TAATATTTCAGGAACATTCG+TGG | 0.538468 | 5_3:-5848959 | Msa0794040:intron |
| AAGGAAAAGTCCTTATCAGA+TGG | 0.541772 | 5_3:-5848149 | Msa0794040:CDS |
| TGGATTTCAAGCATGGTGAA+AGG | 0.544832 | 5_3:-5847924 | Msa0794040:CDS |
| AAGTGGGAAGAAGGGCTTGG+AGG | 0.545767 | 5_3:-5846331 | Msa0794040:three_prime_UTR |
| CTAATTTAACATCCTCCAGC+AGG | 0.545874 | 5_3:-5848334 | Msa0794040:CDS |
| CATTACTTACTTCAGGATGT+CGG | 0.547841 | 5_3:+5846558 | None:intergenic |
| TAGTACCGCCAGATAAAATC+CGG | 0.549876 | 5_3:+5846824 | None:intergenic |
| ATCAGAATATTAATTTAAAG+CGG | 0.551454 | 5_3:-5846774 | Msa0794040:CDS |
| ACAAAACATGTTTACTTGTG+AGG | 0.552330 | 5_3:+5847101 | None:intergenic |
| TGGAGCAAAATTCTCCATCA+AGG | 0.553513 | 5_3:-5848442 | Msa0794040:CDS |
| AGTCACCGGAAAGACAATCC+AGG | 0.553846 | 5_3:-5847327 | Msa0794040:CDS |
| GTGGCTTGTATAACTATAAG+TGG | 0.554774 | 5_3:-5846295 | Msa0794040:intron |
| AGGAAAAGTCCTTATCAGAT+GGG | 0.555535 | 5_3:-5848148 | Msa0794040:CDS |
| TGCAGATTGACAAGGCAGAC+CGG | 0.555594 | 5_3:-5846843 | Msa0794040:CDS |
| TGCCGTGAGCATAGCTCAGT+TGG | 0.557091 | 5_3:+5845416 | None:intergenic |
| TAATTTATGCCTTCATTGGG+AGG | 0.557620 | 5_3:+5848416 | None:intergenic |
| CAGCTGAGCAATCACTGAGT+TGG | 0.558671 | 5_3:+5847055 | None:intergenic |
| TGGATCATTCTCGCAACTCG+AGG | 0.560436 | 5_3:-5846380 | Msa0794040:three_prime_UTR |
| TGAAGTAATAAATCATCAGT+TGG | 0.560508 | 5_3:+5848488 | None:intergenic |
| ACCTTTAAGGTGAATAAGTG+GGG | 0.561200 | 5_3:-5845489 | Msa0794040:three_prime_UTR |
| TGGTCTGCCAACTCAGAAGC+AGG | 0.561703 | 5_3:-5845619 | Msa0794040:three_prime_UTR |
| TCTGGCGGTACTATCCATGA+TGG | 0.562268 | 5_3:-5846814 | Msa0794040:CDS |
| GTGAATAAGTGGGGAATCCG+GGG | 0.566584 | 5_3:-5845480 | Msa0794040:three_prime_UTR |
| AAATGGCTTCGACGTTTGCA+AGG | 0.568653 | 5_3:-5847173 | Msa0794040:CDS |
| TGAGCATAGCTCAGTTGGTA+GGG | 0.569562 | 5_3:+5845421 | None:intergenic |
| CGATTTGCTCCAAAATCCAG+TGG | 0.570951 | 5_3:-5847288 | Msa0794040:CDS |
| ATATTGTGGTTCTAGTTCAA+AGG | 0.571071 | 5_3:-5846698 | Msa0794040:CDS |
| ACATGTCGTGGTTTGAACCC+CGG | 0.578097 | 5_3:+5845463 | None:intergenic |
| AAGCAGAGAATATCAGTCAC+CGG | 0.581238 | 5_3:-5847341 | Msa0794040:CDS |
| TTACATTGATTATAGCAGCT+AGG | 0.585790 | 5_3:+5848667 | None:intergenic |
| GCATCATGCAAGAAATATTG+TGG | 0.587668 | 5_3:-5846712 | Msa0794040:CDS |
| ACAGTTAGTGTGTAGCAGAT+GGG | 0.591202 | 5_3:-5846413 | Msa0794040:three_prime_UTR |
| CTTGTGCCTTAGTAAGGACA+AGG | 0.597028 | 5_3:-5847451 | Msa0794040:CDS |
| TCAAAACCTTTGTCCATGAA+GGG | 0.597057 | 5_3:-5846879 | Msa0794040:CDS |
| GGATCATTCTCGCAACTCGA+GGG | 0.597301 | 5_3:-5846379 | Msa0794040:three_prime_UTR |
| GTGAGCATAGCTCAGTTGGT+AGG | 0.598007 | 5_3:+5845420 | None:intergenic |
| TCTTACTATGAATAATGTCA+AGG | 0.599639 | 5_3:+5849479 | None:intergenic |
| GGTTCAATATTAGGCTGTGA+CGG | 0.600004 | 5_3:+5847540 | None:intergenic |
| TAAATAAACATATTAACACT+TGG | 0.607007 | 5_3:+5845373 | None:intergenic |
| GTTATGCCGCTTCTTACCTG+TGG | 0.607094 | 5_3:+5848049 | None:intergenic |
| TACAGGAAGAAATCATGGAA+TGG | 0.611613 | 5_3:-5845642 | Msa0794040:intron |
| ATTATCTACGACACATGTCG+TGG | 0.611870 | 5_3:+5845451 | None:intergenic |
| ATGTTTCATCAAGAAGGAGA+AGG | 0.623506 | 5_3:-5847708 | Msa0794040:CDS |
| ACAGGAAGAACCTTAACGCA+AGG | 0.624154 | 5_3:+5848221 | None:intergenic |
| CTTTATAATACAAAATGTCA+CGG | 0.625149 | 5_3:+5846517 | None:intergenic |
| GAAGATTTCACATGTGCCAG+AGG | 0.625270 | 5_3:-5846620 | Msa0794040:CDS |
| AGGAAGAAATCATGGAATGG+TGG | 0.625917 | 5_3:-5845639 | Msa0794040:three_prime_UTR |
| TAATTCGGAAAGAGGATCAG+TGG | 0.635047 | 5_3:+5848777 | None:intergenic |
| GATGCTGAAAACAAATATGA+GGG | 0.635203 | 5_3:-5848260 | Msa0794040:CDS |
| GTCACCGGAAAGACAATCCA+GGG | 0.636256 | 5_3:-5847326 | Msa0794040:CDS |
| ATCTCTCTCAGTGAAAGTAG+GGG | 0.638733 | 5_3:-5846114 | Msa0794040:three_prime_UTR |
| ATCCTCGCGAAGATGATGAA+AGG | 0.640734 | 5_3:+5847211 | None:intergenic |
| TTTGTCCTTCTGAAGATGAG+TGG | 0.640790 | 5_3:-5848931 | Msa0794040:exon |
| GACCTTTCATCATCTTCGCG+AGG | 0.641559 | 5_3:-5847213 | Msa0794040:CDS |
| AAGATTTCACATGTGCCAGA+GGG | 0.642256 | 5_3:-5846619 | Msa0794040:CDS |
| TTCGCGAGGATTCACAAACT+CGG | 0.642339 | 5_3:-5847199 | Msa0794040:CDS |
| TCTCTCTCAGTGAAAGTAGG+GGG | 0.646665 | 5_3:-5846113 | Msa0794040:three_prime_UTR |
| ATGTAACAGCAAAATCCGCA+TGG | 0.652139 | 5_3:-5848186 | Msa0794040:CDS |
| TGGAGGAACTGGTTACCATG+TGG | 0.653299 | 5_3:-5846314 | Msa0794040:three_prime_UTR |
| GGAAAAGTCCTTATCAGATG+GGG | 0.656916 | 5_3:-5848147 | Msa0794040:CDS |
| CTTACTTCAGGATGTCGGTG+CGG | 0.670580 | 5_3:+5846563 | None:intergenic |
| AAGACCGGTGCAGATTGACA+AGG | 0.674989 | 5_3:-5846851 | Msa0794040:CDS |
| TCATGGTAATCCAAACAACA+AGG | 0.679129 | 5_3:+5849616 | None:intergenic |
| TCAAGAAGGAGAAGGTGACG+AGG | 0.679529 | 5_3:-5847700 | Msa0794040:CDS |
| TACCAACTGAGCTATGCTCA+CGG | 0.692649 | 5_3:-5845418 | Msa0794040:three_prime_UTR |
| GAGCCTGTAACTGAATACAA+AGG | 0.702420 | 5_3:-5848374 | Msa0794040:CDS |
| GCTTCAGAGAGATATGACGC+TGG | 0.707407 | 5_3:-5847564 | Msa0794040:CDS |
| AGCAAAATTCTCCATCAAGG+AGG | 0.713594 | 5_3:-5848439 | Msa0794040:CDS |
| TTATAGTTATACAAGCCACA+TGG | 0.755776 | 5_3:+5846299 | None:intergenic |
| TGGAACATGAAACTGCCCAG+TGG | 0.805275 | 5_3:+5846935 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATGTTAATAAAAGT+AGG | + | chr5_3:5845599-5845618 | None:intergenic | 10.0% |
| !! | ATATATAAATGTAAATGTAA+AGG | + | chr5_3:5846439-5846458 | None:intergenic | 10.0% |
| !!! | AAGTATTTAACTTCTATAAA+GGG | + | chr5_3:5846242-5846261 | None:intergenic | 15.0% |
| !!! | TCAGAATTATTTTCATTTTA+AGG | - | chr5_3:5846480-5846499 | Msa0794040:three_prime_UTR | 15.0% |
| !! | AAATTTAAAGGTTCAATATT+AGG | + | chr5_3:5847963-5847982 | None:intergenic | 15.0% |
| !! | ATCAGAATATTAATTTAAAG+CGG | - | chr5_3:5848717-5848736 | Msa0794040:CDS | 15.0% |
| !!! | TTTTAAACTTTTTCTTATTC+TGG | - | chr5_3:5849307-5849326 | Msa0794040:intron | 15.0% |
| !! | AATCATCAATGATTATTTAT+TGG | - | chr5_3:5849462-5849481 | Msa0794040:intron | 15.0% |
| !! | AACAAAAAAAAAATGGTTAA+AGG | + | chr5_3:5849958-5849977 | None:intergenic | 15.0% |
| !! | TAAATAAACATATTAACACT+TGG | + | chr5_3:5850121-5850140 | None:intergenic | 15.0% |
| !! | TCTTATCTAAACAAAACATA+AGG | + | chr5_3:5845476-5845495 | None:intergenic | 20.0% |
| !! | ATCTAATAAGATTAAAGTTG+TGG | + | chr5_3:5845535-5845554 | None:intergenic | 20.0% |
| !!! | CTTTTATATTAAAGCATCTT+TGG | - | chr5_3:5845763-5845782 | Msa0794040:intron | 20.0% |
| !!! | TTTAATTCAACAAGTTGAAT+TGG | + | chr5_3:5845836-5845855 | None:intergenic | 20.0% |
| !!! | TAACAAACAATTTGAGTTTA+TGG | - | chr5_3:5845957-5845976 | Msa0794040:intron | 20.0% |
| !!! | TTATTTCACAAAAGCATTAT+AGG | + | chr5_3:5846073-5846092 | None:intergenic | 20.0% |
| !!! | CAAGTATTTAACTTCTATAA+AGG | + | chr5_3:5846243-5846262 | None:intergenic | 20.0% |
| !! | CATAATTCAATCAAGTAATT+CGG | - | chr5_3:5846381-5846400 | Msa0794040:three_prime_UTR | 20.0% |
| !!! | TTTGATTCGAATAATATTTC+AGG | - | chr5_3:5846521-5846540 | Msa0794040:three_prime_UTR | 20.0% |
| !! | AATCAATGTAAGAAACATAT+AGG | - | chr5_3:5846836-5846855 | Msa0794040:CDS | 20.0% |
| !! | AACATTTCTTAAATCATTCT+CGG | + | chr5_3:5847211-5847230 | None:intergenic | 20.0% |
| !! | TGGCTGTTATAAAAATTTAA+AGG | + | chr5_3:5847975-5847994 | None:intergenic | 20.0% |
| !!! | TTTAAATTTTTATAACAGCC+AGG | - | chr5_3:5847974-5847993 | Msa0794040:CDS | 20.0% |
| !! | GAAAATGTAAATTCATATGA+AGG | - | chr5_3:5848488-5848507 | Msa0794040:CDS | 20.0% |
| !! | AAACATTTAATGCACATAAA+AGG | + | chr5_3:5848527-5848546 | None:intergenic | 20.0% |
| !! | CTTTATAATACAAAATGTCA+CGG | + | chr5_3:5848977-5848996 | None:intergenic | 20.0% |
| !!! | TTCAGCTCTAATAAATTTTA+TGG | - | chr5_3:5849668-5849687 | Msa0794040:intron | 20.0% |
| !!! | TCTAATAAATTTTATGGAGT+GGG | - | chr5_3:5849674-5849693 | Msa0794040:intron | 20.0% |
| !!! | TTATTACAATCAACATGTTT+TGG | - | chr5_3:5849791-5849810 | Msa0794040:intron | 20.0% |
| !! | ACTTGACAACAAAAAAAAAA+TGG | + | chr5_3:5849965-5849984 | None:intergenic | 20.0% |
| ! | ATAAGAAAAAAGAGAAACTG+AGG | + | chr5_3:5845325-5845344 | None:intergenic | 25.0% |
| !! | TTAGAAGATTCATTGTTTTC+TGG | - | chr5_3:5845367-5845386 | Msa0794040:three_prime_UTR | 25.0% |
| !! | TTCTTAGCTAGCTTATTTAT+TGG | - | chr5_3:5845427-5845446 | Msa0794040:three_prime_UTR | 25.0% |
| ! | AAAACATAATAGTAAGCTAG+TGG | + | chr5_3:5845641-5845660 | None:intergenic | 25.0% |
| !! | TAGCTTACTATTATGTTTTG+TGG | - | chr5_3:5845642-5845661 | Msa0794040:intron | 25.0% |
| ! | AGTTGTAATAGAATATGTCA+TGG | - | chr5_3:5845697-5845716 | Msa0794040:intron | 25.0% |
| ! | TCTTACTATGAATAATGTCA+AGG | + | chr5_3:5846015-5846034 | None:intergenic | 25.0% |
| ! | TTCTATAGCTTTCTTAAAGT+TGG | + | chr5_3:5846101-5846120 | None:intergenic | 25.0% |
| ! | GTTAGAATAATGGTTTATTG+AGG | - | chr5_3:5846286-5846305 | Msa0794040:intron | 25.0% |
| ! | ATAATGGTTTATTGAGGAAA+AGG | - | chr5_3:5846292-5846311 | Msa0794040:intron | 25.0% |
| !!! | TTCTAGCTTAATGTTACTTA+AGG | - | chr5_3:5846404-5846423 | Msa0794040:three_prime_UTR | 25.0% |
| ! | ATGAAAATAATTCTGAATGC+AGG | + | chr5_3:5846476-5846495 | None:intergenic | 25.0% |
| ! | TGAAGTAATAAATCATCAGT+TGG | + | chr5_3:5847006-5847025 | None:intergenic | 25.0% |
| ! | TCATAATTTATGCCTTCATT+GGG | + | chr5_3:5847081-5847100 | None:intergenic | 25.0% |
| ! | ATCATAATTTATGCCTTCAT+TGG | + | chr5_3:5847082-5847101 | None:intergenic | 25.0% |
| !! | TTCTTGTTTAATGTAGGATT+TGG | + | chr5_3:5847532-5847551 | None:intergenic | 25.0% |
| !! | GATTTGAATCCTGTATTTTT+CGG | + | chr5_3:5847714-5847733 | None:intergenic | 25.0% |
| !! | ATAATACATGGACTGAAAAA+TGG | + | chr5_3:5847736-5847755 | None:intergenic | 25.0% |
| ! | TATCCAAGTTTGAAGAATAT+AGG | - | chr5_3:5847753-5847772 | Msa0794040:CDS | 25.0% |
| !! | TGAACATATACTTCAACTTT+TGG | + | chr5_3:5848256-5848275 | None:intergenic | 25.0% |
| !!! | AACATGTTTTGTTTGTTTTG+TGG | - | chr5_3:5848401-5848420 | Msa0794040:CDS | 25.0% |
| !! | CACATAAAAGGAAAATTTTC+CGG | + | chr5_3:5848515-5848534 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTTGAGATTGAAC+TGG | + | chr5_3:5848579-5848598 | None:intergenic | 25.0% |
| ! | TCTATTGCTCAATTACATTA+AGG | - | chr5_3:5849006-5849025 | Msa0794040:intron | 25.0% |
| !!! | ATACCTGGTTCATTTTTTTT+TGG | - | chr5_3:5849258-5849277 | Msa0794040:intron | 25.0% |
| ! | TATCCAAAAAAAAATGAACC+AGG | + | chr5_3:5849264-5849283 | None:intergenic | 25.0% |
| ! | GATATAGCTTCAATAACAAT+AGG | + | chr5_3:5849607-5849626 | None:intergenic | 25.0% |
| ! | TATATCGTTTCAATGTCATT+TGG | - | chr5_3:5849621-5849640 | Msa0794040:five_prime_UTR | 25.0% |
| !! | CTCTAATAAATTTTATGGAG+TGG | - | chr5_3:5849673-5849692 | Msa0794040:intron | 25.0% |
| ! | TTCAAAAAGAAACAAATGCT+AGG | - | chr5_3:5849932-5849951 | Msa0794040:intron | 25.0% |
| ! | ATAATATATACATGCACAAC+TGG | - | chr5_3:5850226-5850245 | Msa0794040:five_prime_UTR | 25.0% |
| ! | TTTTCTGGATCAAACATAAC+TGG | - | chr5_3:5845382-5845401 | Msa0794040:three_prime_UTR | 30.0% |
| !! | TATTGGTTTCTTCACTTTCA+AGG | - | chr5_3:5845444-5845463 | Msa0794040:three_prime_UTR | 30.0% |
| GTGGATAAGATAAGATAAAG+TGG | + | chr5_3:5845516-5845535 | None:intergenic | 30.0% | |
| TCATGGAAAATAACCAACAA+TGG | - | chr5_3:5845714-5845733 | Msa0794040:intron | 30.0% | |
| ! | TTAAAGCATCTTTGGTCAAA+TGG | - | chr5_3:5845771-5845790 | Msa0794040:intron | 30.0% |
| TTCTTCATGACAAATCTTCA+TGG | + | chr5_3:5845895-5845914 | None:intergenic | 30.0% | |
| TTAGACAACAAGCTTATGAA+TGG | + | chr5_3:5845940-5845959 | None:intergenic | 30.0% | |
| !! | TCACAAAAGCATTATAGGTT+AGG | + | chr5_3:5846068-5846087 | None:intergenic | 30.0% |
| ! | AAGGGCTAAGTCTATATTTT+TGG | + | chr5_3:5846214-5846233 | None:intergenic | 30.0% |
| !!! | CTTCTATAAAGGGTTTTGAA+GGG | + | chr5_3:5846232-5846251 | None:intergenic | 30.0% |
| !! | ACTTCTATAAAGGGTTTTGA+AGG | + | chr5_3:5846233-5846252 | None:intergenic | 30.0% |
| GCATAGAGAAGTTAGAATAA+TGG | - | chr5_3:5846276-5846295 | Msa0794040:intron | 30.0% | |
| !! | TTTCTGAAATGCACCTTATT+AGG | + | chr5_3:5846343-5846362 | None:intergenic | 30.0% |
| TAATATTTCAGGAACATTCG+TGG | - | chr5_3:5846532-5846551 | Msa0794040:three_prime_UTR | 30.0% | |
| ATCTGAAGACCAAACTAATT+CGG | + | chr5_3:5846732-5846751 | None:intergenic | 30.0% | |
| ! | TTAGTTTGGTCTTCAGATAA+AGG | - | chr5_3:5846734-5846753 | Msa0794040:CDS | 30.0% |
| TTTATCAGCAAAGCTTGAAT+CGG | + | chr5_3:5846777-5846796 | None:intergenic | 30.0% | |
| ! | TTACATTGATTATAGCAGCT+AGG | + | chr5_3:5846827-5846846 | None:intergenic | 30.0% |
| AGATGAACCTAAACCTATTA+TGG | - | chr5_3:5847029-5847048 | Msa0794040:CDS | 30.0% | |
| ! | TTTTGCTCCATAATAGGTTT+AGG | + | chr5_3:5847039-5847058 | None:intergenic | 30.0% |
| ! | GAAGGCATAAATTATGATAC+TGG | - | chr5_3:5847084-5847103 | Msa0794040:CDS | 30.0% |
| ! | CTAGATTCCAGTTTTTCTAT+AGG | + | chr5_3:5847186-5847205 | None:intergenic | 30.0% |
| TGATGCTGAAAACAAATATG+AGG | - | chr5_3:5847230-5847249 | Msa0794040:CDS | 30.0% | |
| GATGCTGAAAACAAATATGA+GGG | - | chr5_3:5847231-5847250 | Msa0794040:CDS | 30.0% | |
| TGCAAATGTAAGATTATCCA+TGG | - | chr5_3:5847368-5847387 | Msa0794040:CDS | 30.0% | |
| ! | TGAGCTTTCTTGTTTAATGT+AGG | + | chr5_3:5847538-5847557 | None:intergenic | 30.0% |
| TATGAAGATTTGGATTTGCA+AGG | + | chr5_3:5847638-5847657 | None:intergenic | 30.0% | |
| ATCCAAATCTTCATAATGCA+TGG | - | chr5_3:5847643-5847662 | Msa0794040:CDS | 30.0% | |
| AACCATGCATTATGAAGATT+TGG | + | chr5_3:5847648-5847667 | None:intergenic | 30.0% | |
| CTTCAAACTTGGATAATACA+TGG | + | chr5_3:5847748-5847767 | None:intergenic | 30.0% | |
| GTTCCTATATTCTTCAAACT+TGG | + | chr5_3:5847759-5847778 | None:intergenic | 30.0% | |
| ACAAGAATGTTTCATCAAGA+AGG | - | chr5_3:5847777-5847796 | Msa0794040:CDS | 30.0% | |
| AGATCAATTGCCTTAACAAA+CGG | - | chr5_3:5847877-5847896 | Msa0794040:CDS | 30.0% | |
| ! | ATTGAAAATGCCGTTTGTTA+AGG | + | chr5_3:5847890-5847909 | None:intergenic | 30.0% |
| ! | GGTTAATTTTGCTTATTTCC+TGG | + | chr5_3:5847995-5848014 | None:intergenic | 30.0% |
| ! | AACAATTTTCATTCTCTGCT+GGG | + | chr5_3:5848016-5848035 | None:intergenic | 30.0% |
| ACAAAACATGTTTACTTGTG+AGG | + | chr5_3:5848393-5848412 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTTTGTGGAAAAAG+AGG | - | chr5_3:5848410-5848429 | Msa0794040:CDS | 30.0% |
| TGTAAATTCATATGAAGGTC+CGG | - | chr5_3:5848493-5848512 | Msa0794040:CDS | 30.0% | |
| CTCAAAAAGAAAACCTGAAT+CGG | - | chr5_3:5848586-5848605 | Msa0794040:intron | 30.0% | |
| ! | TATTCTGATCTGTTTTGTGA+TGG | + | chr5_3:5848706-5848725 | None:intergenic | 30.0% |
| !! | ATATTGTGGTTCTAGTTCAA+AGG | - | chr5_3:5848793-5848812 | Msa0794040:CDS | 30.0% |
| TTATAGTTATACAAGCCACA+TGG | + | chr5_3:5849195-5849214 | None:intergenic | 30.0% | |
| CTTCTCTAAACTATGTTTCT+CGG | + | chr5_3:5849346-5849365 | None:intergenic | 30.0% | |
| ! | ATCCAATCAAGATTTTCTTG+AGG | - | chr5_3:5849431-5849450 | Msa0794040:intron | 30.0% |
| TACCTCAAGAAAATCTTGAT+TGG | + | chr5_3:5849436-5849455 | None:intergenic | 30.0% | |
| CTGAATTTCACATGAGTTTA+TGG | + | chr5_3:5849653-5849672 | None:intergenic | 30.0% | |
| TGATTTCTTCCTGTACAAAA+GGG | + | chr5_3:5849844-5849863 | None:intergenic | 30.0% | |
| ATGATTTCTTCCTGTACAAA+AGG | + | chr5_3:5849845-5849864 | None:intergenic | 30.0% | |
| ! | TTTTGTACAGGAAGAAATCA+TGG | - | chr5_3:5849844-5849863 | Msa0794040:intron | 30.0% |
| TTAAAGGTGAAATTGCTACT+AGG | + | chr5_3:5849990-5850009 | None:intergenic | 30.0% | |
| TAGTAGCAATTTCACCTTTA+AGG | - | chr5_3:5849989-5850008 | Msa0794040:intron | 30.0% | |
| AACACTTGGTAAAAGACTAA+AGG | + | chr5_3:5850107-5850126 | None:intergenic | 30.0% | |
| AAAAAGAGAAACTGAGGAAG+TGG | + | chr5_3:5845319-5845338 | None:intergenic | 35.0% | |
| TCATGGTAATCCAAACAACA+AGG | + | chr5_3:5845878-5845897 | None:intergenic | 35.0% | |
| GTTAGCTATGAAGCTATGTT+TGG | - | chr5_3:5845987-5846006 | Msa0794040:intron | 35.0% | |
| AAGAGTTCACTATCAGTCTT+TGG | + | chr5_3:5846608-5846627 | None:intergenic | 35.0% | |
| ATCCTCTTTCCGAATTAGTT+TGG | - | chr5_3:5846720-5846739 | Msa0794040:CDS | 35.0% | |
| ! | CGAGGGTATATTTCAAATGT+TGG | + | chr5_3:5846883-5846902 | None:intergenic | 35.0% |
| !!! | CCTACTTTTTTGAACATCGA+GGG | + | chr5_3:5846900-5846919 | None:intergenic | 35.0% |
| !!! | ACCTACTTTTTTGAACATCG+AGG | + | chr5_3:5846901-5846920 | None:intergenic | 35.0% |
| CAGAACGAGGAATACTATTA+AGG | + | chr5_3:5846954-5846973 | None:intergenic | 35.0% | |
| ! | TTCTGAATTTTCTGCAGATC+AGG | - | chr5_3:5846969-5846988 | Msa0794040:CDS | 35.0% |
| ! | GGAGAATTTTGCTCCATAAT+AGG | + | chr5_3:5847045-5847064 | None:intergenic | 35.0% |
| TAATTTATGCCTTCATTGGG+AGG | + | chr5_3:5847078-5847097 | None:intergenic | 35.0% | |
| ! | TTTTTCTATAGGATTCCTGC+TGG | + | chr5_3:5847175-5847194 | None:intergenic | 35.0% |
| CAGGAATCCTATAGAAAAAC+TGG | - | chr5_3:5847176-5847195 | Msa0794040:CDS | 35.0% | |
| TTACATGGAGAATGCAAAAC+AGG | + | chr5_3:5847291-5847310 | None:intergenic | 35.0% | |
| AAGGAAAAGTCCTTATCAGA+TGG | - | chr5_3:5847342-5847361 | Msa0794040:CDS | 35.0% | |
| AGGAAAAGTCCTTATCAGAT+GGG | - | chr5_3:5847343-5847362 | Msa0794040:CDS | 35.0% | |
| TGAATTGCTGTCATTATCCA+TGG | + | chr5_3:5847388-5847407 | None:intergenic | 35.0% | |
| !!! | TTTTTTCCACAGGTAAGAAG+CGG | - | chr5_3:5847436-5847455 | Msa0794040:CDS | 35.0% |
| ATCGACAATGAAGAAACTTC+TGG | - | chr5_3:5847504-5847523 | Msa0794040:CDS | 35.0% | |
| AAGAAAGCTCATTCAGAAAC+TGG | - | chr5_3:5847547-5847566 | Msa0794040:CDS | 35.0% | |
| ATGTTTCATCAAGAAGGAGA+AGG | - | chr5_3:5847783-5847802 | Msa0794040:CDS | 35.0% | |
| ! | CCATGTACAGTGTTATTACT+TGG | + | chr5_3:5847825-5847844 | None:intergenic | 35.0% |
| CCAAGTAATAACACTGTACA+TGG | - | chr5_3:5847822-5847841 | Msa0794040:CDS | 35.0% | |
| ! | ATCTCTGGAAAACAGGTTAT+TGG | + | chr5_3:5847861-5847880 | None:intergenic | 35.0% |
| TTGTTAAGGCAATTGATCTC+TGG | + | chr5_3:5847876-5847895 | None:intergenic | 35.0% | |
| ! | GAACAATTTTCATTCTCTGC+TGG | + | chr5_3:5848017-5848036 | None:intergenic | 35.0% |
| TTCAAACTTGTGCCTTAGTA+AGG | - | chr5_3:5848034-5848053 | Msa0794040:CDS | 35.0% | |
| TTTCTTCCTTGTCCTTACTA+AGG | + | chr5_3:5848049-5848068 | None:intergenic | 35.0% | |
| TAGTAAGGACAAGGAAGAAA+TGG | - | chr5_3:5848049-5848068 | Msa0794040:CDS | 35.0% | |
| ATTCTCTGCTTTCTTTCTCT+CGG | + | chr5_3:5848141-5848160 | None:intergenic | 35.0% | |
| TTTACTTGTGAGGTACATTC+TGG | + | chr5_3:5848383-5848402 | None:intergenic | 35.0% | |
| TCAAAACCTTTGTCCATGAA+GGG | - | chr5_3:5848612-5848631 | Msa0794040:intron | 35.0% | |
| !!! | TTTTGTGATGGATTCCATCA+TGG | + | chr5_3:5848694-5848713 | None:intergenic | 35.0% |
| TGATGCATTGCATTCTATCT+TGG | + | chr5_3:5848765-5848784 | None:intergenic | 35.0% | |
| GCATCATGCAAGAAATATTG+TGG | - | chr5_3:5848779-5848798 | Msa0794040:CDS | 35.0% | |
| CATTACTTACTTCAGGATGT+CGG | + | chr5_3:5848936-5848955 | None:intergenic | 35.0% | |
| ATGTCACGGTATAAGTTAGT+AGG | + | chr5_3:5848963-5848982 | None:intergenic | 35.0% | |
| ! | GTGGCTTGTATAACTATAAG+TGG | - | chr5_3:5849196-5849215 | Msa0794040:intron | 35.0% |
| TTAAAATCACACTTTGCCCT+TGG | - | chr5_3:5849224-5849243 | Msa0794040:intron | 35.0% | |
| GGTATGATTCTACATTCCAA+GGG | + | chr5_3:5849243-5849262 | None:intergenic | 35.0% | |
| AGGTATGATTCTACATTCCA+AGG | + | chr5_3:5849244-5849263 | None:intergenic | 35.0% | |
| TTGGAATGTAGAATCATACC+TGG | - | chr5_3:5849243-5849262 | Msa0794040:intron | 35.0% | |
| ! | TTTCACTGAGAGAGATTTTC+TGG | + | chr5_3:5849373-5849392 | None:intergenic | 35.0% |
| AAATCTCTCTCAGTGAAAGT+AGG | - | chr5_3:5849375-5849394 | Msa0794040:intron | 35.0% | |
| AATCTCTCTCAGTGAAAGTA+GGG | - | chr5_3:5849376-5849395 | Msa0794040:intron | 35.0% | |
| GATTTCTTCCTGTACAAAAG+GGG | + | chr5_3:5849843-5849862 | None:intergenic | 35.0% | |
| TACAGGAAGAAATCATGGAA+TGG | - | chr5_3:5849849-5849868 | Msa0794040:intron | 35.0% | |
| GATATCAGATCTTCTTCAGA+TGG | + | chr5_3:5849908-5849927 | None:intergenic | 35.0% | |
| !! | TCACCTTTAAGGTGAATAAG+TGG | - | chr5_3:5850000-5850019 | Msa0794040:intron | 35.0% |
| !! | CACCTTTAAGGTGAATAAGT+GGG | - | chr5_3:5850001-5850020 | Msa0794040:intron | 35.0% |
| !! | ACCTTTAAGGTGAATAAGTG+GGG | - | chr5_3:5850002-5850021 | Msa0794040:intron | 35.0% |
| ! | TTGATAGCACATGCCATTGT+TGG | + | chr5_3:5845730-5845749 | None:intergenic | 40.0% |
| !! | AGCAGTTGATCCTTGTTGTT+TGG | - | chr5_3:5845865-5845884 | Msa0794040:intron | 40.0% |
| ! | TTTGTCCTTCTGAAGATGAG+TGG | - | chr5_3:5846560-5846579 | Msa0794040:exon | 40.0% |
| !!! | AGTCATTTTTCCAATCGCAC+TGG | + | chr5_3:5846646-5846665 | None:intergenic | 40.0% |
| TGGAAAAATGACTCATGTGC+AGG | - | chr5_3:5846653-5846672 | Msa0794040:CDS | 40.0% | |
| TAATTCGGAAAGAGGATCAG+TGG | + | chr5_3:5846717-5846736 | None:intergenic | 40.0% | |
| GACCAAACTAATTCGGAAAG+AGG | + | chr5_3:5846725-5846744 | None:intergenic | 40.0% | |
| !! | AGTTCTCTTTTTCGCGATGT+TGG | - | chr5_3:5846800-5846819 | Msa0794040:CDS | 40.0% |
| CCCTCGATGTTCAAAAAAGT+AGG | - | chr5_3:5846897-5846916 | Msa0794040:CDS | 40.0% | |
| TCTGCAGAAAATTCAGAACG+AGG | + | chr5_3:5846967-5846986 | None:intergenic | 40.0% | |
| TGGAGCAAAATTCTCCATCA+AGG | - | chr5_3:5847049-5847068 | Msa0794040:CDS | 40.0% | |
| AGCAAAATTCTCCATCAAGG+AGG | - | chr5_3:5847052-5847071 | Msa0794040:CDS | 40.0% | |
| GAGCCTGTAACTGAATACAA+AGG | - | chr5_3:5847117-5847136 | Msa0794040:CDS | 40.0% | |
| GAGCCTTTGTATTCAGTTAC+AGG | + | chr5_3:5847123-5847142 | None:intergenic | 40.0% | |
| GTAACTGAATACAAAGGCTC+TGG | - | chr5_3:5847123-5847142 | Msa0794040:CDS | 40.0% | |
| CTAATTTAACATCCTCCAGC+AGG | - | chr5_3:5847157-5847176 | Msa0794040:CDS | 40.0% | |
| !!! | ATGCGGATTTTGCTGTTACA+TGG | + | chr5_3:5847306-5847325 | None:intergenic | 40.0% |
| ATGTAACAGCAAAATCCGCA+TGG | - | chr5_3:5847305-5847324 | Msa0794040:CDS | 40.0% | |
| ATCCGCATGGCAAAAAACAA+AGG | - | chr5_3:5847318-5847337 | Msa0794040:CDS | 40.0% | |
| !!! | TGCCTTTGTTTTTTGCCATG+CGG | + | chr5_3:5847323-5847342 | None:intergenic | 40.0% |
| CATGGCAAAAAACAAAGGCA+AGG | - | chr5_3:5847323-5847342 | Msa0794040:CDS | 40.0% | |
| GGAAAAGTCCTTATCAGATG+GGG | - | chr5_3:5847344-5847363 | Msa0794040:CDS | 40.0% | |
| ATTTGCATCCCCATCTGATA+AGG | + | chr5_3:5847355-5847374 | None:intergenic | 40.0% | |
| TTGAAAGCTGTAACAGTGCT+AGG | - | chr5_3:5847412-5847431 | Msa0794040:CDS | 40.0% | |
| !!! | AGTGCTAGGTTTTTTTCCAC+AGG | - | chr5_3:5847426-5847445 | Msa0794040:CDS | 40.0% |
| !! | TCTCAACAGCAGTTGATGAT+TGG | - | chr5_3:5847465-5847484 | Msa0794040:CDS | 40.0% |
| !! | CTCAACAGCAGTTGATGATT+GGG | - | chr5_3:5847466-5847485 | Msa0794040:CDS | 40.0% |
| CAGAAACTGGATTTCAAGCA+TGG | - | chr5_3:5847560-5847579 | Msa0794040:CDS | 40.0% | |
| TGGATTTCAAGCATGGTGAA+AGG | - | chr5_3:5847567-5847586 | Msa0794040:CDS | 40.0% | |
| GGATTTCAAGCATGGTGAAA+GGG | - | chr5_3:5847568-5847587 | Msa0794040:CDS | 40.0% | |
| AATCCTGAGCCGAAAAATAC+AGG | - | chr5_3:5847702-5847721 | Msa0794040:CDS | 40.0% | |
| !! | AATCCTGTATTTTTCGGCTC+AGG | + | chr5_3:5847708-5847727 | None:intergenic | 40.0% |
| ! | GCAATTGATCTCTGGAAAAC+AGG | + | chr5_3:5847868-5847887 | None:intergenic | 40.0% |
| GGTTCAATATTAGGCTGTGA+CGG | + | chr5_3:5847954-5847973 | None:intergenic | 40.0% | |
| AAGCAGAGAATATCAGTCAC+CGG | - | chr5_3:5848150-5848169 | Msa0794040:CDS | 40.0% | |
| !! | TCCAAAATCCAGTGGTTTTG+AGG | - | chr5_3:5848211-5848230 | Msa0794040:CDS | 40.0% |
| ! | TCCTCAAAACCACTGGATTT+TGG | + | chr5_3:5848215-5848234 | None:intergenic | 40.0% |
| ATTCACAAACTCGGAGCAAA+TGG | - | chr5_3:5848301-5848320 | Msa0794040:CDS | 40.0% | |
| ACGTTTGCAAGGAGATTTGT+TGG | - | chr5_3:5848329-5848348 | Msa0794040:CDS | 40.0% | |
| !! | GTACATTCTGGTTTGTCTGT+CGG | + | chr5_3:5848371-5848390 | None:intergenic | 40.0% |
| AAGTGAGCTAGAAGATCTTC+AGG | - | chr5_3:5848466-5848485 | Msa0794040:CDS | 40.0% | |
| ! | AATGTTTTCAGCTCAACCAC+TGG | - | chr5_3:5848540-5848559 | Msa0794040:intron | 40.0% |
| ! | ATGTTTTCAGCTCAACCACT+GGG | - | chr5_3:5848541-5848560 | Msa0794040:intron | 40.0% |
| !!! | AAGGTTTTGACTTCCGATTC+AGG | + | chr5_3:5848602-5848621 | None:intergenic | 40.0% |
| GTCAAAACCTTTGTCCATGA+AGG | - | chr5_3:5848611-5848630 | Msa0794040:intron | 40.0% | |
| TAGTACCGCCAGATAAAATC+CGG | + | chr5_3:5848670-5848689 | None:intergenic | 40.0% | |
| CTTGGCGTTTATAACGTCAT+TGG | + | chr5_3:5848747-5848766 | None:intergenic | 40.0% | |
| TATAACATCTCCGTCGAGAT+TGG | - | chr5_3:5848841-5848860 | Msa0794040:CDS | 40.0% | |
| ! | TTCTTTTCAGCCAATCTCGA+CGG | + | chr5_3:5848854-5848873 | None:intergenic | 40.0% |
| AAGATTTCACATGTGCCAGA+GGG | - | chr5_3:5848872-5848891 | Msa0794040:CDS | 40.0% | |
| ACTGCATCAAAAATTCCCTC+TGG | + | chr5_3:5848890-5848909 | None:intergenic | 40.0% | |
| AGGCTTGCATTACTTACTTC+AGG | + | chr5_3:5848943-5848962 | None:intergenic | 40.0% | |
| TACAGTTAGTGTGTAGCAGA+TGG | - | chr5_3:5849077-5849096 | Msa0794040:intron | 40.0% | |
| ACAGTTAGTGTGTAGCAGAT+GGG | - | chr5_3:5849078-5849097 | Msa0794040:intron | 40.0% | |
| ATCTCTCTCAGTGAAAGTAG+GGG | - | chr5_3:5849377-5849396 | Msa0794040:intron | 40.0% | |
| !! | GCTATTTTCCCCTTTTGTAC+AGG | - | chr5_3:5849832-5849851 | Msa0794040:intron | 40.0% |
| AGGAAGAAATCATGGAATGG+TGG | - | chr5_3:5849852-5849871 | Msa0794040:intron | 40.0% | |
| TCCCCACTTATTCACCTTAA+AGG | + | chr5_3:5850006-5850025 | None:intergenic | 40.0% | |
| ATTATCTACGACACATGTCG+TGG | + | chr5_3:5850043-5850062 | None:intergenic | 40.0% | |
| AGTTGAATTGGAGCTCTGCA+AGG | + | chr5_3:5845824-5845843 | None:intergenic | 45.0% | |
| TGTATGCAGCACGCCTAATA+AGG | - | chr5_3:5846327-5846346 | Msa0794040:three_prime_UTR | 45.0% | |
| CTTCTCCACTCATCTTCAGA+AGG | + | chr5_3:5846568-5846587 | None:intergenic | 45.0% | |
| !! | CTGCAGATCAGGTTGATCAA+AGG | - | chr5_3:5846980-5846999 | Msa0794040:CDS | 45.0% |
| TTCTATAGGATTCCTGCTGG+AGG | + | chr5_3:5847172-5847191 | None:intergenic | 45.0% | |
| AACGACACTACCTTGCGTTA+AGG | - | chr5_3:5847260-5847279 | Msa0794040:CDS | 45.0% | |
| ACAGGAAGAACCTTAACGCA+AGG | + | chr5_3:5847273-5847292 | None:intergenic | 45.0% | |
| CTTGTGCCTTAGTAAGGACA+AGG | - | chr5_3:5848040-5848059 | Msa0794040:CDS | 45.0% | |
| TCTGCTTTCTTTCTCTCGGA+TGG | + | chr5_3:5848137-5848156 | None:intergenic | 45.0% | |
| AAGACAATCCAGGGAGTCTA+TGG | - | chr5_3:5848174-5848193 | Msa0794040:CDS | 45.0% | |
| ! | CGATTTGCTCCAAAATCCAG+TGG | - | chr5_3:5848203-5848222 | Msa0794040:CDS | 45.0% |
| CTCATCTTCCTCAAAACCAC+TGG | + | chr5_3:5848222-5848241 | None:intergenic | 45.0% | |
| ATCCTCGCGAAGATGATGAA+AGG | + | chr5_3:5848283-5848302 | None:intergenic | 45.0% | |
| TTCGCGAGGATTCACAAACT+CGG | - | chr5_3:5848292-5848311 | Msa0794040:CDS | 45.0% | |
| AAATGGCTTCGACGTTTGCA+AGG | - | chr5_3:5848318-5848337 | Msa0794040:CDS | 45.0% | |
| CTGTCGGCATGATATGTTTG+AGG | + | chr5_3:5848355-5848374 | None:intergenic | 45.0% | |
| ! | AAGGCAGACCGGATTTTATC+TGG | - | chr5_3:5848659-5848678 | Msa0794040:intron | 45.0% |
| CTCGACGGAGATGTTATACT+AGG | + | chr5_3:5848839-5848858 | None:intergenic | 45.0% | |
| GAAGATTTCACATGTGCCAG+AGG | - | chr5_3:5848871-5848890 | Msa0794040:CDS | 45.0% | |
| TCTCTCTCAGTGAAAGTAGG+GGG | - | chr5_3:5849378-5849397 | Msa0794040:intron | 45.0% | |
| AGTAGGGGGAATCAAGTGTA+TGG | - | chr5_3:5849392-5849411 | Msa0794040:intron | 45.0% | |
| AGGTGAATAAGTGGGGAATC+CGG | - | chr5_3:5850009-5850028 | Msa0794040:intron | 45.0% | |
| ! | TGAGCATAGCTCAGTTGGTA+GGG | + | chr5_3:5850073-5850092 | None:intergenic | 45.0% |
| TACCAACTGAGCTATGCTCA+CGG | - | chr5_3:5850073-5850092 | Msa0794040:intron | 45.0% | |
| ATAACGCTGACCAGTGCGAT+TGG | - | chr5_3:5846633-5846652 | Msa0794040:CDS | 50.0% | |
| ! | GTTATGCCGCTTCTTACCTG+TGG | + | chr5_3:5847445-5847464 | None:intergenic | 50.0% |
| TCAAGAAGGAGAAGGTGACG+AGG | - | chr5_3:5847791-5847810 | Msa0794040:CDS | 50.0% | |
| GCTTCAGAGAGATATGACGC+TGG | - | chr5_3:5847927-5847946 | Msa0794040:CDS | 50.0% | |
| AGTCACCGGAAAGACAATCC+AGG | - | chr5_3:5848164-5848183 | Msa0794040:CDS | 50.0% | |
| GTCACCGGAAAGACAATCCA+GGG | - | chr5_3:5848165-5848184 | Msa0794040:CDS | 50.0% | |
| GACTCCCTGGATTGTCTTTC+CGG | + | chr5_3:5848172-5848191 | None:intergenic | 50.0% | |
| CGAGTTATCCATAGACTCCC+TGG | + | chr5_3:5848185-5848204 | None:intergenic | 50.0% | |
| GACCTTTCATCATCTTCGCG+AGG | - | chr5_3:5848278-5848297 | Msa0794040:CDS | 50.0% | |
| CAGCTGAGCAATCACTGAGT+TGG | + | chr5_3:5848439-5848458 | None:intergenic | 50.0% | |
| TGGAACATGAAACTGCCCAG+TGG | + | chr5_3:5848559-5848578 | None:intergenic | 50.0% | |
| TGCAGTCCCTTCATGGACAA+AGG | + | chr5_3:5848621-5848640 | None:intergenic | 50.0% | |
| AAGACCGGTGCAGATTGACA+AGG | - | chr5_3:5848640-5848659 | Msa0794040:intron | 50.0% | |
| TCTGCCTTGTCAATCTGCAC+CGG | + | chr5_3:5848647-5848666 | None:intergenic | 50.0% | |
| TGCAGATTGACAAGGCAGAC+CGG | - | chr5_3:5848648-5848667 | Msa0794040:intron | 50.0% | |
| ! | GCAGACCGGATTTTATCTGG+CGG | - | chr5_3:5848662-5848681 | Msa0794040:intron | 50.0% |
| TCTGGCGGTACTATCCATGA+TGG | - | chr5_3:5848677-5848696 | Msa0794040:CDS | 50.0% | |
| TTACTTCAGGATGTCGGTGC+GGG | + | chr5_3:5848930-5848949 | None:intergenic | 50.0% | |
| CTTACTTCAGGATGTCGGTG+CGG | + | chr5_3:5848931-5848950 | None:intergenic | 50.0% | |
| AGCAGATGGGTAACTGCTCA+TGG | - | chr5_3:5849091-5849110 | Msa0794040:intron | 50.0% | |
| TGGATCATTCTCGCAACTCG+AGG | - | chr5_3:5849111-5849130 | Msa0794040:intron | 50.0% | |
| GGATCATTCTCGCAACTCGA+GGG | - | chr5_3:5849112-5849131 | Msa0794040:intron | 50.0% | |
| !!! | AGGGTTTTTTCTTGCGCCTG+CGG | - | chr5_3:5849131-5849150 | Msa0794040:intron | 50.0% |
| TGGAGGAACTGGTTACCATG+TGG | - | chr5_3:5849177-5849196 | Msa0794040:intron | 50.0% | |
| CTCAACACCTGCTTCTGAGT+TGG | + | chr5_3:5849882-5849901 | None:intergenic | 50.0% | |
| GGTGAATAAGTGGGGAATCC+GGG | - | chr5_3:5850010-5850029 | Msa0794040:intron | 50.0% | |
| GTGAATAAGTGGGGAATCCG+GGG | - | chr5_3:5850011-5850030 | Msa0794040:intron | 50.0% | |
| ACATGTCGTGGTTTGAACCC+CGG | + | chr5_3:5850031-5850050 | None:intergenic | 50.0% | |
| GTGAGCATAGCTCAGTTGGT+AGG | + | chr5_3:5850074-5850093 | None:intergenic | 50.0% | |
| TCATTGGGAGGCCTCCTTGA+TGG | + | chr5_3:5847066-5847085 | None:intergenic | 55.0% | |
| TCAAGGAGGCCTCCCAATGA+AGG | - | chr5_3:5847066-5847085 | Msa0794040:CDS | 55.0% | |
| !! | TACAAAGGCTCTGGTGCTGC+AGG | - | chr5_3:5847132-5847151 | Msa0794040:CDS | 55.0% |
| CTTTCTCTCGGATGGTGCGT+TGG | + | chr5_3:5848129-5848148 | None:intergenic | 55.0% | |
| CCATGAAGGGACTGCAAGAC+CGG | - | chr5_3:5848625-5848644 | Msa0794040:intron | 55.0% | |
| ! | TTTTTCTTGCGCCTGCGGCT+TGG | - | chr5_3:5849136-5849155 | Msa0794040:intron | 55.0% |
| ! | TTTTCTTGCGCCTGCGGCTT+GGG | - | chr5_3:5849137-5849156 | Msa0794040:intron | 55.0% |
| GGCTTGGGAAGTGGGAAGAA+GGG | - | chr5_3:5849152-5849171 | Msa0794040:intron | 55.0% | |
| AAGTGGGAAGAAGGGCTTGG+AGG | - | chr5_3:5849160-5849179 | Msa0794040:intron | 55.0% | |
| GAAGAAGGGCTTGGAGGAAC+TGG | - | chr5_3:5849166-5849185 | Msa0794040:intron | 55.0% | |
| TGGTCTGCCAACTCAGAAGC+AGG | - | chr5_3:5849872-5849891 | Msa0794040:intron | 55.0% | |
| TGCCGTGAGCATAGCTCAGT+TGG | + | chr5_3:5850078-5850097 | None:intergenic | 55.0% | |
| CCGGTCTTGCAGTCCCTTCA+TGG | + | chr5_3:5848628-5848647 | None:intergenic | 60.0% | |
| ! | CGGCTTGGGAAGTGGGAAGA+AGG | - | chr5_3:5849151-5849170 | Msa0794040:intron | 60.0% |
| GGGAAGTGGGAAGAAGGGCT+TGG | - | chr5_3:5849157-5849176 | Msa0794040:intron | 60.0% | |
| CTTCCCACTTCCCAAGCCGC+AGG | + | chr5_3:5849150-5849169 | None:intergenic | 65.0% | |
| ! | TGCGCCTGCGGCTTGGGAAG+TGG | - | chr5_3:5849143-5849162 | Msa0794040:intron | 70.0% |
| ! | GCGCCTGCGGCTTGGGAAGT+GGG | - | chr5_3:5849144-5849163 | Msa0794040:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 5845252 | 5850261 | 5845252 | ID=Msa0794040;Name=Msa0794040 |
| chr5_3 | mRNA | 5845252 | 5850261 | 5845252 | ID=Msa0794040-mRNA-1;Parent=Msa0794040;Name=Msa0794040-mRNA-1;_AED=0.02;_eAED=0.02;_QI=384|1|1|1|0.6|0.33|6|789|743 |
| chr5_3 | exon | 5845252 | 5845659 | 5845252 | ID=Msa0794040-mRNA-1:exon:2343;Parent=Msa0794040-mRNA-1 |
| chr5_3 | exon | 5846061 | 5846173 | 5846061 | ID=Msa0794040-mRNA-1:exon:2342;Parent=Msa0794040-mRNA-1 |
| chr5_3 | exon | 5846296 | 5848527 | 5846296 | ID=Msa0794040-mRNA-1:exon:2341;Parent=Msa0794040-mRNA-1 |
| chr5_3 | exon | 5848671 | 5848970 | 5848671 | ID=Msa0794040-mRNA-1:exon:2340;Parent=Msa0794040-mRNA-1 |
| chr5_3 | exon | 5849485 | 5849684 | 5849485 | ID=Msa0794040-mRNA-1:exon:2339;Parent=Msa0794040-mRNA-1 |
| chr5_3 | exon | 5850110 | 5850261 | 5850110 | ID=Msa0794040-mRNA-1:exon:2338;Parent=Msa0794040-mRNA-1 |
| chr5_3 | five_prime_UTR | 5850110 | 5850261 | 5850110 | ID=Msa0794040-mRNA-1:five_prime_utr;Parent=Msa0794040-mRNA-1 |
| chr5_3 | five_prime_UTR | 5849485 | 5849684 | 5849485 | ID=Msa0794040-mRNA-1:five_prime_utr;Parent=Msa0794040-mRNA-1 |
| chr5_3 | five_prime_UTR | 5848939 | 5848970 | 5848939 | ID=Msa0794040-mRNA-1:five_prime_utr;Parent=Msa0794040-mRNA-1 |
| chr5_3 | CDS | 5848671 | 5848938 | 5848671 | ID=Msa0794040-mRNA-1:cds;Parent=Msa0794040-mRNA-1 |
| chr5_3 | CDS | 5846564 | 5848527 | 5846564 | ID=Msa0794040-mRNA-1:cds;Parent=Msa0794040-mRNA-1 |
| chr5_3 | three_prime_UTR | 5846296 | 5846563 | 5846296 | ID=Msa0794040-mRNA-1:three_prime_utr;Parent=Msa0794040-mRNA-1 |
| chr5_3 | three_prime_UTR | 5846061 | 5846173 | 5846061 | ID=Msa0794040-mRNA-1:three_prime_utr;Parent=Msa0794040-mRNA-1 |
| chr5_3 | three_prime_UTR | 5845252 | 5845659 | 5845252 | ID=Msa0794040-mRNA-1:three_prime_utr;Parent=Msa0794040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
