AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0577140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577140 MtrunA17_Chr8g0382921 94.278 769 6 3 1 765 1 735 0.0 1451
Msa0577140 MtrunA17_Chr3g0129101 80.154 781 102 8 1 765 1 744 0.0 1224
Msa0577140 MtrunA17_Chr3g0120791 43.662 639 285 10 130 761 138 708 1.06e-172 513
Msa0577140 MtrunA17_Chr4g0012061 29.981 517 274 13 150 652 113 555 3.05e-66 233
Msa0577140 MtrunA17_Chr3g0136721 32.517 449 222 11 194 629 138 518 5.63e-65 229
Msa0577140 MtrunA17_Chr7g0230671 31.712 514 266 13 148 652 106 543 7.22e-65 229
Msa0577140 MtrunA17_Chr6g0465161 31.663 439 223 8 191 627 129 492 2.42e-61 219
Msa0577140 MtrunA17_Chr1g0148121 31.084 489 260 9 172 652 116 535 1.87e-60 216
Msa0577140 MtrunA17_Chr1g0199921 32.917 480 239 14 194 654 203 618 7.34e-55 202
Msa0577140 MtrunA17_Chr1g0169361 30.206 437 231 12 194 627 187 552 2.22e-48 183
Msa0577140 MtrunA17_Chr1g0147481 27.254 488 271 12 172 632 95 525 3.01e-42 166
Msa0577140 MtrunA17_Chr5g0428451 26.027 438 271 11 193 622 127 519 8.98e-39 151
Msa0577140 MtrunA17_Chr5g0433911 30.519 308 171 7 205 509 77 344 2.78e-38 150
Msa0577140 MtrunA17_Chr4g0057941 26.680 506 278 16 145 632 20 450 4.83e-37 145
Msa0577140 MtrunA17_Chr3g0113361 33.074 257 152 8 191 440 87 330 1.57e-32 133
Msa0577140 MtrunA17_Chr8g0360981 26.269 335 190 9 187 500 203 501 1.51e-23 105
Msa0577140 MtrunA17_Chr1g0193751 27.446 368 235 10 80 433 108 457 4.43e-23 104
Msa0577140 MtrunA17_Chr2g0281061 26.364 330 191 9 187 500 211 504 9.42e-22 100
Msa0577140 MtrunA17_Chr4g0048521 26.426 333 190 9 187 500 214 510 1.53e-21 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577140 AT5G64940.1 75.513 780 136 10 3 765 20 761 0.0 1110
Msa0577140 AT5G64940.2 75.513 780 136 10 3 765 20 761 0.0 1110
Msa0577140 AT3G07700.1 42.979 705 304 16 65 761 81 695 3.00e-177 525
Msa0577140 AT3G07700.2 42.979 705 304 16 65 761 81 695 3.00e-177 525
Msa0577140 AT3G07700.4 42.979 705 304 16 65 761 81 695 3.00e-177 525
Msa0577140 AT3G07700.3 42.697 712 325 17 65 761 81 724 8.59e-175 519
Msa0577140 AT1G79600.1 30.769 533 280 13 143 666 108 560 5.49e-68 238
Msa0577140 AT5G24970.3 32.121 495 236 13 187 652 134 557 1.18e-67 238
Msa0577140 AT5G24970.2 32.121 495 236 13 187 652 173 596 2.03e-67 238
Msa0577140 AT5G24970.1 31.717 495 235 14 187 652 134 554 8.11e-64 227
Msa0577140 AT4G31390.1 30.210 523 279 12 140 652 125 571 5.71e-61 218
Msa0577140 AT1G71810.1 31.317 463 236 9 172 627 96 483 3.10e-60 216
Msa0577140 AT3G24190.1 31.126 453 232 13 194 637 195 576 1.81e-51 192
Msa0577140 AT4G31390.3 29.977 437 233 8 224 652 1 372 8.18e-51 185
Msa0577140 AT2G39190.2 31.429 455 231 12 194 632 202 591 1.47e-50 190
Msa0577140 AT4G31390.2 27.916 523 266 13 140 652 125 546 7.95e-49 183
Msa0577140 AT5G24810.1 27.273 484 276 10 172 632 69 499 5.19e-45 175
Msa0577140 AT5G24810.2 25.825 515 275 11 172 632 69 530 1.83e-40 160
Msa0577140 AT1G65950.2 30.380 316 177 8 205 517 113 388 2.80e-39 152
Msa0577140 AT1G65950.1 30.380 316 177 8 205 517 113 388 9.88e-39 152
Msa0577140 AT5G05200.1 25.427 468 290 11 166 622 101 520 3.11e-37 147
Msa0577140 AT4G24810.6 27.342 395 228 14 201 585 32 377 4.04e-34 136
Msa0577140 AT4G24810.1 27.342 395 228 14 201 585 32 377 4.04e-34 136
Msa0577140 AT4G24810.2 26.058 449 271 15 149 585 21 420 4.95e-34 137
Msa0577140 AT4G24810.4 30.464 302 163 10 201 492 32 296 9.48e-34 132
Msa0577140 AT4G24810.5 30.464 302 163 10 201 492 32 296 1.12e-33 132
Msa0577140 AT5G50330.1 30.183 328 180 10 201 517 75 364 5.66e-33 134
Msa0577140 AT2G39190.1 48.148 162 75 4 194 352 202 357 1.23e-32 130
Msa0577140 AT4G24810.3 26.866 402 228 15 201 585 32 384 9.73e-32 129
Msa0577140 AT2G40090.1 31.128 257 157 7 191 440 89 332 1.07e-29 124
Msa0577140 AT5G50330.2 27.914 326 174 10 201 517 75 348 1.01e-25 111
Msa0577140 AT1G11390.1 27.381 336 182 12 187 500 209 504 5.76e-24 107
Msa0577140 AT1G61640.3 25.228 329 184 10 194 500 213 501 3.19e-21 99.0
Msa0577140 AT1G61640.1 25.228 329 184 10 194 500 213 501 4.39e-21 98.6
Msa0577140 AT4G01660.1 29.365 252 162 5 184 433 218 455 1.09e-20 97.4
Msa0577140 AT1G61640.2 27.941 204 127 5 194 384 213 409 8.53e-18 87.4

Find 233 sgRNAs with CRISPR-Local

Find 666 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAAAGAACGTTGGAAATT+TGG 0.097127 4_1:-81307675 Msa0577140:CDS
CAATTCATTACTTTGCTTAA+AGG 0.104017 4_1:-81299342 Msa0577140:three_prime_UTR
CTTCCTGATGTCAAATTTAT+TGG 0.138130 4_1:+81299114 None:intergenic
ACTTGTTCTTCCTTGCTTAA+TGG 0.146861 4_1:+81302643 None:intergenic
CCCAAATTTCCAACGTTCTT+TGG 0.154258 4_1:+81307674 None:intergenic
CTCTTTGCACCATCTGATTT+AGG 0.185309 4_1:+81305372 None:intergenic
GGTCCTACATTTATCAAAAT+TGG 0.192593 4_1:-81306980 Msa0577140:CDS
CCAAAGAACGTTGGAAATTT+GGG 0.202037 4_1:-81307674 Msa0577140:CDS
TGACCTGGCGGATATATTTA+TGG 0.217557 4_1:+81299255 None:intergenic
AGGTTCATCGTGCGAGATTA+AGG 0.223860 4_1:-81305742 Msa0577140:CDS
CGTCAGAAGTTCTCTTATAA+AGG 0.251727 4_1:-81307613 Msa0577140:intron
GGGAAAATTGTATTTATCAT+AGG 0.261073 4_1:+81299003 None:intergenic
ATGTTACCTCGGGAAGCTTC+TGG 0.261658 4_1:-81303933 Msa0577140:CDS
TGAAAGTCCCTTCAATTTAC+TGG 0.267236 4_1:-81304557 Msa0577140:CDS
TGTAACTGAGGTGCATAAAT+TGG 0.272657 4_1:-81299084 Msa0577140:three_prime_UTR
CAAATAAATACTCACATAAC+AGG 0.304425 4_1:+81298982 None:intergenic
TGTTGCTCATGTTAAGTTCA+TGG 0.308124 4_1:-81299486 Msa0577140:three_prime_UTR
TGACCAATTGTCAGAACTTC+AGG 0.308751 4_1:-81306912 Msa0577140:intron
GCGTGGTCGTTACTCGTTCC+TGG 0.317618 4_1:+81308724 None:intergenic
AGTATTTACCAACCATCTAT+TGG 0.322062 4_1:-81299040 Msa0577140:three_prime_UTR
TTGCAGGTGGCGGTTGCGCC+TGG 0.325289 4_1:-81307733 Msa0577140:intron
TAACCTTCAGAGCATCAATT+AGG 0.342538 4_1:-81299455 Msa0577140:three_prime_UTR
GGTAGCAATGGTTCTGTTAG+AGG 0.342772 4_1:-81308198 Msa0577140:CDS
CCAAGACTTGCAGCAGCTAT+TGG 0.343928 4_1:+81305928 None:intergenic
CACTCGAATTCGTGCTTTGA+AGG 0.345258 4_1:-81308292 Msa0577140:CDS
CGGAAAAGGTTAATAGAATC+TGG 0.349507 4_1:-81304338 Msa0577140:CDS
ACTGGAAGTTGCAGTTATAC+TGG 0.350210 4_1:-81299379 Msa0577140:three_prime_UTR
CACTGGAACTCAGCTTCCCT+TGG 0.350517 4_1:-81303908 Msa0577140:CDS
GAGTTAGAACGACGACGTTT+TGG 0.354622 4_1:+81308333 None:intergenic
AACAGTATCATTACCTTGTC+TGG 0.358721 4_1:+81303541 None:intergenic
AATCTCAGTAATATCAAAAC+GGG 0.359387 4_1:+81301406 None:intergenic
GGCTAATGTTATTGAGCGTT+TGG 0.359655 4_1:-81300819 Msa0577140:intron
TTGCAGCAGACCAGCCCTTC+CGG 0.367733 4_1:-81301582 Msa0577140:CDS
GGAAGCCATATCATACTATA+TGG 0.369767 4_1:+81299135 None:intergenic
ACTGGAACTCAGCTTCCCTT+GGG 0.375392 4_1:-81303907 Msa0577140:CDS
AAGAAGAGGTTGGAAGAGAT+TGG 0.376073 4_1:-81308072 Msa0577140:CDS
GCAACTGTGCAGAAAACAAT+TGG 0.379978 4_1:-81300618 Msa0577140:CDS
AATTATATAGGAATTAGTTT+AGG 0.382302 4_1:-81299175 Msa0577140:three_prime_UTR
TTCAATTCATCTTCAAGTCT+TGG 0.386580 4_1:-81307642 Msa0577140:CDS
GATCAAGAAGTTAGATGAAC+GGG 0.392004 4_1:-81299795 Msa0577140:CDS
CTAACAATGGAGTATGTTCC+AGG 0.393433 4_1:-81304407 Msa0577140:CDS
AATGCTTTCCTTAAGCCATT+TGG 0.396067 4_1:+81307012 None:intergenic
ACTTAGATCCTTCCAATAGA+TGG 0.401104 4_1:+81299028 None:intergenic
CAGCACAGTTCTTCCTCAAT+AGG 0.404961 4_1:-81303352 Msa0577140:intron
TAACCTGAAGTTCTGACAAT+TGG 0.405803 4_1:+81306909 None:intergenic
CAGATGGTGCAAAGAGGGAT+TGG 0.407382 4_1:-81305365 Msa0577140:CDS
AATACAAGCTTTAGATCAGC+TGG 0.408735 4_1:-81304369 Msa0577140:CDS
GAACGGGAACAACTGATTAC+AGG 0.408760 4_1:-81299779 Msa0577140:CDS
TATTAACAGGCAGTAGGTGC+TGG 0.411000 4_1:-81300038 Msa0577140:intron
GATGCGTGGTTCAAACAAAA+TGG 0.411246 4_1:-81308042 Msa0577140:CDS
AAAGAACGTCTGGCTGCTAT+TGG 0.412984 4_1:-81302610 Msa0577140:intron
GAGTGGTGAGCGATGTGAAA+TGG 0.413246 4_1:-81308245 Msa0577140:CDS
TCATCGACTGCAATATTTCC+AGG 0.416229 4_1:+81303778 None:intergenic
GAGTACCATATAGTATGATA+TGG 0.416464 4_1:-81299140 Msa0577140:three_prime_UTR
ACCTGATGTCTCAAGATGTT+TGG 0.421422 4_1:+81299417 None:intergenic
ATTACTTTGCTTAAAGGATC+GGG 0.423790 4_1:-81299336 Msa0577140:three_prime_UTR
CTTCCAATAAATTTGACATC+AGG 0.425150 4_1:-81299117 Msa0577140:three_prime_UTR
CAGTAAATAGTAAATTATAT+AGG 0.428096 4_1:-81299187 Msa0577140:three_prime_UTR
CTTGGCTCATTGCAGATGAT+AGG 0.429432 4_1:-81299516 Msa0577140:intron
TCTCTCTCCTTTGTGCAGCC+AGG 0.429673 4_1:+81302701 None:intergenic
AGCTGGGTGTTGACCGGAAA+AGG 0.434315 4_1:-81304352 Msa0577140:CDS
AGGAGTTGAAGTTATCATAA+AGG 0.437550 4_1:-81301009 Msa0577140:intron
AACCCTTGCCAAATGGCTTA+AGG 0.438042 4_1:-81307020 Msa0577140:CDS
ATGTGAATGTGGCAGGAAAC+CGG 0.438619 4_1:+81301563 None:intergenic
GGTAACATATAATAATCAAT+AGG 0.440827 4_1:+81303948 None:intergenic
AAAGCTTAGAGTCCGAGCTT+TGG 0.441219 4_1:-81300667 Msa0577140:CDS
ACTCACGCGCCATGAAAACT+AGG 0.442338 4_1:-81308463 Msa0577140:five_prime_UTR
CATTACTTTGCTTAAAGGAT+CGG 0.442811 4_1:-81299337 Msa0577140:three_prime_UTR
CAATCTCAGTAATATCAAAA+CGG 0.443352 4_1:+81301405 None:intergenic
ATGGGAGTTCTTGTCCCAAC+TGG 0.443361 4_1:-81303398 Msa0577140:CDS
AGTTGGGAGGAAGAAGAGGT+TGG 0.445822 4_1:-81308082 Msa0577140:CDS
ACAAAAGAAATATGCTATAG+TGG 0.449094 4_1:+81299856 None:intergenic
ATAGCAGTCTCTGAGGGAAA+TGG 0.451278 4_1:+81306015 None:intergenic
GAAGGGCTGGTCTGCTGCAA+TGG 0.451474 4_1:+81301585 None:intergenic
GAGATGGAAGCAGCTGAAGT+TGG 0.454664 4_1:-81302676 Msa0577140:CDS
AAGGAAAGCATTCTGCGGTT+AGG 0.455008 4_1:-81307001 Msa0577140:CDS
CTAGCCTTGTAGTTATGCTC+TGG 0.465868 4_1:-81301054 Msa0577140:intron
TTAGTAACCACACTTATCAA+TGG 0.467039 4_1:-81308412 Msa0577140:exon
CCACTCTTGTGGAGAATTGT+TGG 0.467204 4_1:+81306957 None:intergenic
GGTTCATCGTGCGAGATTAA+GGG 0.469199 4_1:-81305741 Msa0577140:CDS
GGAAAATTGTATTTATCATA+GGG 0.470656 4_1:+81299004 None:intergenic
CCAATAGCTGCTGCAAGTCT+TGG 0.472244 4_1:-81305928 Msa0577140:intron
TTTGTTGTTAGAGCCTTCTC+AGG 0.474971 4_1:-81301541 Msa0577140:intron
TTATTGGTGCGGAGATTTCG+CGG 0.476093 4_1:+81308659 None:intergenic
TTGCTGAAATTCCGTGAGGC+AGG 0.486411 4_1:-81301029 Msa0577140:CDS
AGGAAGTTGGGAGGAAGAAG+AGG 0.487945 4_1:-81308086 Msa0577140:CDS
TTCCTTAAGCCATTTGGCAA+GGG 0.488553 4_1:+81307018 None:intergenic
TCTGTTAGAGGTTATGTGAA+TGG 0.489219 4_1:-81308186 Msa0577140:CDS
GTTATCAAGGTGCAAAGGCC+TGG 0.489968 4_1:-81305707 Msa0577140:CDS
CTTCGAAAAGGAAGGAAGTT+GGG 0.490595 4_1:-81308098 Msa0577140:CDS
AATGAAGAAGAAAGAACGTC+TGG 0.493042 4_1:-81302620 Msa0577140:CDS
ACTTATTTAGACAGGCTGAC+AGG 0.496765 4_1:-81300853 Msa0577140:CDS
AGGAAGAATGTCCACTCTTG+TGG 0.497868 4_1:+81306946 None:intergenic
TGGCAGGAAACCGGAAGGGC+TGG 0.498562 4_1:+81301572 None:intergenic
AAGAAATATGCTATAGTGGC+AGG 0.501882 4_1:+81299860 None:intergenic
CTCTCTCAGATTCCAAAGCT+CGG 0.502587 4_1:+81300655 None:intergenic
TAGATCAGCTGGGTGTTGAC+CGG 0.505125 4_1:-81304358 Msa0577140:CDS
AATCTGCTCCAACGACCTCC+AGG 0.505732 4_1:+81307715 None:intergenic
CAATATATCTTGTGTGGCTG+AGG 0.506994 4_1:-81308690 Msa0577140:five_prime_UTR
TCGGGTCCGTGGTAGCCAAT+TGG 0.507856 4_1:-81299318 Msa0577140:three_prime_UTR
GTTTAATAAACTACCTATTG+AGG 0.507979 4_1:+81303339 None:intergenic
ATTCGTGCTTTGAAGGAAGA+AGG 0.508961 4_1:-81308285 Msa0577140:CDS
GCTATTGTTGAGGAAGAGCT+TGG 0.510140 4_1:-81305991 Msa0577140:CDS
AGATGGTGCAAAGAGGGATT+GGG 0.510352 4_1:-81305364 Msa0577140:CDS
GAAAGTCCCTTCAATTTACT+GGG 0.510884 4_1:-81304556 Msa0577140:CDS
ACATTGTCCATGCAGCATCC+TGG 0.514195 4_1:-81303796 Msa0577140:intron
GGTGCAAAGGCCTGGTCTCA+AGG 0.515078 4_1:-81305699 Msa0577140:CDS
GCCAAACATCTTGAGACATC+AGG 0.516260 4_1:-81299418 Msa0577140:three_prime_UTR
GAGAGTGTGAAACGAAAGAG+TGG 0.519526 4_1:+81308499 None:intergenic
ACAACAAATGTGAATGTGGC+AGG 0.519888 4_1:+81301556 None:intergenic
GGGACAGGAGGTTGTTATCA+AGG 0.520692 4_1:-81305720 Msa0577140:CDS
TCGGGAAGCTTCTGGAGCAC+TGG 0.521808 4_1:-81303925 Msa0577140:CDS
GTATAATCCCAGTAAATTGA+AGG 0.522377 4_1:+81304549 None:intergenic
ACTTCGAAAAGGAAGGAAGT+TGG 0.523124 4_1:-81308099 Msa0577140:CDS
TATATTTATGGAAGGAGAGG+GGG 0.523647 4_1:+81299267 None:intergenic
CTTATTTAGACAGGCTGACA+GGG 0.525786 4_1:-81300852 Msa0577140:CDS
TCAGGAGATTGATTACACTA+AGG 0.527028 4_1:-81304631 Msa0577140:intron
TGCAAGCAACTTTAAGAACA+TGG 0.527376 4_1:-81304586 Msa0577140:CDS
TTGATTATTATATGTTACCT+CGG 0.533480 4_1:-81303944 Msa0577140:CDS
TCCAATGCAGATTCTAACAA+TGG 0.534041 4_1:-81304420 Msa0577140:intron
TGATTATTATATGTTACCTC+GGG 0.534066 4_1:-81303943 Msa0577140:CDS
TCGTGCGAGATTAAGGGGAC+AGG 0.534621 4_1:-81305735 Msa0577140:CDS
GAGCTTGGAGCTCCTATCGC+TGG 0.534983 4_1:-81305976 Msa0577140:CDS
CAACTGTGCAGAAAACAATT+GGG 0.535356 4_1:-81300617 Msa0577140:CDS
CAAAGAACGTTGGAAATTTG+GGG 0.539818 4_1:-81307673 Msa0577140:CDS
CCTTGATGCAATGATTCAGA+TGG 0.540700 4_1:-81303417 Msa0577140:CDS
AAATGGTGAACCACAGGTTG+AGG 0.541246 4_1:-81308025 Msa0577140:intron
GCTCCTAATTGATGCTCTGA+AGG 0.546749 4_1:+81299452 None:intergenic
CAGCAGTCATATCTCCAGTT+GGG 0.547741 4_1:+81303384 None:intergenic
TATTGGTGCGGAGATTTCGC+GGG 0.547933 4_1:+81308660 None:intergenic
TGTGGAAACTTCGAAAAGGA+AGG 0.548889 4_1:-81308106 Msa0577140:CDS
AAACGTCGTCGTTCTAACTC+TGG 0.549627 4_1:-81308330 Msa0577140:CDS
ATATTGCTTCTTCCGTTGCG+TGG 0.550917 4_1:+81308707 None:intergenic
TAAATCAGATGGTGCAAAGA+GGG 0.551924 4_1:-81305370 Msa0577140:CDS
GATGTGAAATGGAGTGGAAA+CGG 0.554004 4_1:-81308234 Msa0577140:CDS
AAAATTGATCCTAAATCAGA+TGG 0.556329 4_1:-81305381 Msa0577140:CDS
ATCAGTCAAAATATCAGAGA+AGG 0.559676 4_1:-81303601 Msa0577140:CDS
TCTGCACAGTTGCAATGCGT+TGG 0.560921 4_1:+81300628 None:intergenic
CAGGTGGCGGTTGCGCCTGG+AGG 0.562563 4_1:-81307730 Msa0577140:CDS
GACTGCTATGGCTATTGTTG+AGG 0.562690 4_1:-81306001 Msa0577140:CDS
TGCTTAAAGGATCGGGTCCG+TGG 0.563443 4_1:-81299329 Msa0577140:three_prime_UTR
TTTGTCTATTAACAGGCAGT+AGG 0.563906 4_1:-81300044 Msa0577140:intron
TTTCCTTAAGCCATTTGGCA+AGG 0.565074 4_1:+81307017 None:intergenic
ATTAACAGGCAGTAGGTGCT+GGG 0.567267 4_1:-81300037 Msa0577140:intron
AGATCCTTCCAATAGATGGT+TGG 0.567488 4_1:+81299032 None:intergenic
AGGTTATGTGAATGGAAGCT+TGG 0.567513 4_1:-81308178 Msa0577140:CDS
ACAGCAGTCATATCTCCAGT+TGG 0.569343 4_1:+81303383 None:intergenic
CTAAATCAGATGGTGCAAAG+AGG 0.571516 4_1:-81305371 Msa0577140:CDS
CGGTTGCGCCTGGAGGTCGT+TGG 0.572658 4_1:-81307723 Msa0577140:CDS
GGCTCGCCAATTGGCTACCA+CGG 0.575158 4_1:+81299312 None:intergenic
AGATCAAGAAGTTAGATGAA+CGG 0.575933 4_1:-81299796 Msa0577140:CDS
GGAAACGGCAGTGTTGTCAA+TGG 0.577363 4_1:-81308219 Msa0577140:CDS
GTGAAATATGTGAATGGCAA+TGG 0.578954 4_1:-81308156 Msa0577140:CDS
TTTACCAACCATCTATTGGA+AGG 0.579614 4_1:-81299036 Msa0577140:three_prime_UTR
GGACTGCATAAGCAACTACT+AGG 0.581954 4_1:-81299757 Msa0577140:intron
CCGAGGAAAAGAAAACCTTA+AGG 0.583196 4_1:-81307048 Msa0577140:CDS
ATATATTTATGGAAGGAGAG+GGG 0.584718 4_1:+81299266 None:intergenic
TTGGAGGAATGTTATTGGTG+CGG 0.585847 4_1:+81308648 None:intergenic
TGATCAAATATGCCAGCGAT+AGG 0.587154 4_1:+81305964 None:intergenic
CTGGAACTCAGCTTCCCTTG+GGG 0.589745 4_1:-81303906 Msa0577140:intron
CTTCCATAAATATATCCGCC+AGG 0.590019 4_1:-81299258 Msa0577140:three_prime_UTR
AACGGGAACAACTGATTACA+GGG 0.590103 4_1:-81299778 Msa0577140:CDS
GATATATTTATGGAAGGAGA+GGG 0.591757 4_1:+81299265 None:intergenic
TTTGAAGGAAGAAGGTGCAT+TGG 0.592847 4_1:-81308277 Msa0577140:CDS
GTTCATCGTGCGAGATTAAG+GGG 0.593423 4_1:-81305740 Msa0577140:CDS
TTAGAGCAGATTCTCTCGCA+TGG 0.596155 4_1:-81304170 Msa0577140:CDS
CCATCTGAATCATTGCATCA+AGG 0.596376 4_1:+81303417 None:intergenic
CTGGGATTATACCACCCCAC+AGG 0.597019 4_1:-81304538 Msa0577140:intron
ATTTCCCTCAGAGACTGCTA+TGG 0.597696 4_1:-81306013 Msa0577140:CDS
CTTCAAAGCACGAATTCGAG+TGG 0.598011 4_1:+81308293 None:intergenic
AACGAGTAACGACCACGCAA+CGG 0.598569 4_1:-81308719 Msa0577140:five_prime_UTR
ATATGATGGTGACACGTGGC+AGG 0.600247 4_1:+81308602 None:intergenic
AAAGAACGTTGGAAATTTGG+GGG 0.601752 4_1:-81307672 Msa0577140:CDS
CAAACAAAATGGTGAACCAC+AGG 0.602089 4_1:-81308031 Msa0577140:CDS
GCTCATTGCAGATGATAGGA+TGG 0.605597 4_1:-81299512 Msa0577140:intron
CCAACAATTCTCCACAAGAG+TGG 0.606830 4_1:-81306957 Msa0577140:CDS
GGAGATTGATTACACTAAGG+AGG 0.606888 4_1:-81304628 Msa0577140:CDS
GGATATATTTATGGAAGGAG+AGG 0.607851 4_1:+81299264 None:intergenic
ATAGTAAGTGTTACTTGACC+TGG 0.608211 4_1:+81299240 None:intergenic
AGTGTTGTCAATGGTAGCAA+TGG 0.608683 4_1:-81308210 Msa0577140:CDS
TAACAATGGAGTATGTTCCA+GGG 0.610133 4_1:-81304406 Msa0577140:CDS
TCTAACAACAAATGTGAATG+TGG 0.610357 4_1:+81301552 None:intergenic
TATAATCCCAGTAAATTGAA+GGG 0.610547 4_1:+81304550 None:intergenic
GTCCTTGTTATCAACCCCAA+GGG 0.611125 4_1:+81303892 None:intergenic
CTGGCGGATATATTTATGGA+AGG 0.616330 4_1:+81299259 None:intergenic
TGCATTGGTTGAAGAAAGAG+TGG 0.617013 4_1:-81308262 Msa0577140:CDS
GAATGGCAATGGTGTGGCGG+CGG 0.618010 4_1:-81308145 Msa0577140:CDS
GTGAGCGATGTGAAATGGAG+TGG 0.619020 4_1:-81308240 Msa0577140:CDS
AGGTTAAAGATGAGCTACGA+AGG 0.619487 4_1:+81308622 None:intergenic
TTCAAAGCACGAATTCGAGT+GGG 0.623372 4_1:+81308294 None:intergenic
AGCTTGGTGAAATATGTGAA+TGG 0.626574 4_1:-81308162 Msa0577140:CDS
AATTGGTCAACATATTCTTG+AGG 0.628933 4_1:+81306926 None:intergenic
CTTGATGCAATGATTCAGAT+GGG 0.629314 4_1:-81303416 Msa0577140:CDS
AAATAAATACTCACATAACA+GGG 0.631541 4_1:+81298983 None:intergenic
CTCACGCGCCATGAAAACTA+GGG 0.632217 4_1:-81308462 Msa0577140:five_prime_UTR
AAGAAGCAATATATCTTGTG+TGG 0.633882 4_1:-81308696 Msa0577140:five_prime_UTR
ATTGCAGTCGATGATGTCAA+TGG 0.634844 4_1:-81303769 Msa0577140:CDS
GAATGTGGCAGGAAACCGGA+AGG 0.635963 4_1:+81301567 None:intergenic
GAGACAAGAACATACAGGAT+CGG 0.638939 4_1:+81304136 None:intergenic
TGCGAGATTAAGGGGACAGG+AGG 0.640204 4_1:-81305732 Msa0577140:CDS
TAACTTCAACTCCTGCCTCA+CGG 0.644751 4_1:+81301018 None:intergenic
CTCGACGATCCAAAGAACGT+TGG 0.645116 4_1:-81307683 Msa0577140:CDS
ATACAAGCTTTAGATCAGCT+GGG 0.647204 4_1:-81304368 Msa0577140:CDS
GGAAGTTGCAGTTATACTGG+AGG 0.647778 4_1:-81299376 Msa0577140:three_prime_UTR
GTTACTAAAATGAGAGACTG+AGG 0.648419 4_1:+81308427 None:intergenic
ATAGCCATAGCAGTCTCTGA+GGG 0.649217 4_1:+81306009 None:intergenic
AGGTTGTTATCAAGGTGCAA+AGG 0.650335 4_1:-81305712 Msa0577140:CDS
GCAGTCTCTGAGGGAAATGG+AGG 0.651488 4_1:+81306018 None:intergenic
TACACACATACCTCAACCTG+TGG 0.651499 4_1:+81308015 None:intergenic
ACAAAGGAGAGAGAAAGAGA+TGG 0.651674 4_1:-81302692 Msa0577140:CDS
TCAATACAACTAAACTAACC+AGG 0.657953 4_1:-81308742 None:intergenic
AATAGCCATAGCAGTCTCTG+AGG 0.658798 4_1:+81306008 None:intergenic
AGTGGAAGGATGGAATATGA+TGG 0.661886 4_1:+81308588 None:intergenic
TTAAGGTTGAACCTGTGGGG+TGG 0.664559 4_1:+81304527 None:intergenic
AAGAACGCCTGGCTGCACAA+AGG 0.664893 4_1:-81302708 Msa0577140:CDS
TTATGAGAAGAGTCCAGACA+AGG 0.667398 4_1:-81303554 Msa0577140:intron
GGCTTAAGGAAAGCATTCTG+CGG 0.667512 4_1:-81307006 Msa0577140:CDS
GGAAGCTATACTTGTAACTG+AGG 0.668696 4_1:-81299096 Msa0577140:three_prime_UTR
AGATTGGAAAAGAAGATGCG+TGG 0.675627 4_1:-81308056 Msa0577140:CDS
TGTGAATGGCAATGGTGTGG+CGG 0.675671 4_1:-81308148 Msa0577140:CDS
TCGATGATGTCAATGGTGGA+AGG 0.678331 4_1:-81303762 Msa0577140:CDS
AAGAACATACAGGATCGGCA+TGG 0.681050 4_1:+81304141 None:intergenic
GAAGAAGCCATTGATAAGTG+TGG 0.682303 4_1:+81308405 None:intergenic
CGAAAAGGAAGGAAGTTGGG+AGG 0.689590 4_1:-81308095 Msa0577140:CDS
GTAAGTGTTACTTGACCTGG+CGG 0.710530 4_1:+81299243 None:intergenic
AAATTAAGGTTGAACCTGTG+GGG 0.711505 4_1:+81304524 None:intergenic
GCAGTCGATGATGTCAATGG+TGG 0.715104 4_1:-81303766 Msa0577140:CDS
ATATGTGAATGGCAATGGTG+TGG 0.719684 4_1:-81308151 Msa0577140:CDS
ATCTCAGTAATATCAAAACG+GGG 0.726716 4_1:+81301407 None:intergenic
GGAGTTGCTGAAATTCCGTG+AGG 0.727502 4_1:-81301033 Msa0577140:CDS
AGTGCTCCAGAAGCTTCCCG+AGG 0.731710 4_1:+81303927 None:intergenic
AATGTGGCAGGAAACCGGAA+GGG 0.743989 4_1:+81301568 None:intergenic
TGGAATATGATGGTGACACG+TGG 0.744529 4_1:+81308598 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAAAAGAAAAAAAAA+AGG - chr4_1:81299890-81299909 Msa0577140:intron 10.0%
!! AAATATGATTAATAACAAAT+TGG + chr4_1:81300879-81300898 None:intergenic 10.0%
!!! TTTGTTATTAATCATATTTA+TGG - chr4_1:81300880-81300899 Msa0577140:CDS 10.0%
!! CATAATTTATTAGAAAAATA+GGG + chr4_1:81301307-81301326 None:intergenic 10.0%
!! ACATAATTTATTAGAAAAAT+AGG + chr4_1:81301308-81301327 None:intergenic 10.0%
!!! TAACTTTTGATTAAAAAAAA+TGG - chr4_1:81307392-81307411 Msa0577140:intron 10.0%
!!! AACTTTTGATTAAAAAAAAT+GGG - chr4_1:81307393-81307412 Msa0577140:intron 10.0%
!! AAAACATCTATTATAATCTA+CGG + chr4_1:81300118-81300137 None:intergenic 15.0%
!! TGTTTATTCATAAAATCATT+TGG - chr4_1:81300526-81300545 Msa0577140:intron 15.0%
!!! TAAATAAAATCTAAAATCCA+GGG + chr4_1:81300930-81300949 None:intergenic 15.0%
!!! ATAAATAAAATCTAAAATCC+AGG + chr4_1:81300931-81300950 None:intergenic 15.0%
!!! ATCTAATTGTTGTTAAAAAA+TGG - chr4_1:81301082-81301101 Msa0577140:intron 15.0%
!!! AATGATGTGATTAATTTTAA+GGG - chr4_1:81302853-81302872 Msa0577140:intron 15.0%
!! TGGAAAAAATAGTTAAATTA+TGG + chr4_1:81303254-81303273 None:intergenic 15.0%
!! AGTGTTAAAAACTTATAAAT+AGG - chr4_1:81304506-81304525 Msa0577140:intron 15.0%
!! TAAATAGGAAAATCTAATAT+TGG - chr4_1:81304521-81304540 Msa0577140:intron 15.0%
!!! AAATAAATATGTTTTTGCAA+CGG - chr4_1:81305716-81305735 Msa0577140:CDS 15.0%
!!! AAGAAATGTTTAATTTCAAT+CGG - chr4_1:81305907-81305926 Msa0577140:intron 15.0%
!!! TCAATTTTATCTTAGTAAAT+TGG + chr4_1:81306573-81306592 None:intergenic 15.0%
!! ATGCAAATATAATTATTTGT+TGG - chr4_1:81307128-81307147 Msa0577140:intron 15.0%
!! TGCAAATATAATTATTTGTT+GGG - chr4_1:81307129-81307148 Msa0577140:intron 15.0%
!! CAGTAAATAGTAAATTATAT+AGG - chr4_1:81308503-81308522 Msa0577140:five_prime_UTR 15.0%
!!! AATTATATAGGAATTAGTTT+AGG - chr4_1:81308515-81308534 Msa0577140:five_prime_UTR 15.0%
!! CATATAGATATTTACTAACA+AGG + chr4_1:81300231-81300250 None:intergenic 20.0%
!! TTTAAAAAAATGGCAATCTA+AGG + chr4_1:81300480-81300499 None:intergenic 20.0%
!!! TTAGATTGCCATTTTTTTAA+AGG - chr4_1:81300479-81300498 Msa0577140:intron 20.0%
!!! TAGATTGCCATTTTTTTAAA+GGG - chr4_1:81300480-81300499 Msa0577140:intron 20.0%
!! GAATACATAAGATTATAAAG+AGG + chr4_1:81301057-81301076 None:intergenic 20.0%
!! AAGAAGAGAAAAAGATATTA+AGG - chr4_1:81301597-81301616 Msa0577140:CDS 20.0%
!!! TTTTAGATATAATGTTTGCT+TGG - chr4_1:81301885-81301904 Msa0577140:intron 20.0%
!! ATAATTGATACAATCTGTTA+TGG - chr4_1:81302462-81302481 Msa0577140:intron 20.0%
!!! TTAGGATTTTTTTTTTGTGT+CGG - chr4_1:81302761-81302780 Msa0577140:intron 20.0%
!!! GAATGATGTGATTAATTTTA+AGG - chr4_1:81302852-81302871 Msa0577140:intron 20.0%
!! TATATTGCTGTAAGAAATTA+AGG + chr4_1:81303183-81303202 None:intergenic 20.0%
!!! ATTTTGTTTATTTTAATCCC+TGG + chr4_1:81303304-81303323 None:intergenic 20.0%
!! GGTAACATATAATAATCAAT+AGG + chr4_1:81303745-81303764 None:intergenic 20.0%
!! TTGATTATTATATGTTACCT+CGG - chr4_1:81303746-81303765 Msa0577140:CDS 20.0%
!!! ATATTTTATGCTTATCTTTC+AGG - chr4_1:81303833-81303852 Msa0577140:intron 20.0%
!!! TTTTATGATTTTGGTATGAT+GGG - chr4_1:81303957-81303976 Msa0577140:CDS 20.0%
!!! TATTTGAAATACAGATTTAC+AGG - chr4_1:81304001-81304020 Msa0577140:intron 20.0%
!! TAGATATGATTATTGTTTGT+TGG - chr4_1:81304675-81304694 Msa0577140:intron 20.0%
!! GCAAAAACATATTTATTTAG+TGG + chr4_1:81305714-81305733 None:intergenic 20.0%
!!! AGAAATGTTTAATTTCAATC+GGG - chr4_1:81305908-81305927 Msa0577140:intron 20.0%
!!! ATTTTACAACTTATTTAGAC+AGG - chr4_1:81306829-81306848 Msa0577140:intron 20.0%
!!! GCAAATATAATTATTTGTTG+GGG - chr4_1:81307130-81307149 Msa0577140:intron 20.0%
!! AACAAAAATAATGTAAAAGC+AGG + chr4_1:81307362-81307381 None:intergenic 20.0%
!! TTCATCGTATTGTTAAAAAA+TGG + chr4_1:81307475-81307494 None:intergenic 20.0%
!! GTTTATAATAAATACATGCA+TGG + chr4_1:81307571-81307590 None:intergenic 20.0%
!!! GTTATTGATAATTAACTCTT+TGG - chr4_1:81307600-81307619 Msa0577140:intron 20.0%
!!! ACTTCAATTAATTGATAATC+TGG - chr4_1:81307764-81307783 Msa0577140:intron 20.0%
!!! TTTTGCATATGATCTTAATA+TGG + chr4_1:81308005-81308024 None:intergenic 20.0%
!! CATATGCAAAAATTTCAATT+AGG - chr4_1:81308014-81308033 Msa0577140:intron 20.0%
!!! TGGAGATTTTTTCTTTTTAT+TGG - chr4_1:81308069-81308088 Msa0577140:CDS 20.0%
!! GGAAAATTGTATTTATCATA+GGG + chr4_1:81308689-81308708 None:intergenic 20.0%
!! AAATAAATACTCACATAACA+GGG + chr4_1:81308710-81308729 None:intergenic 20.0%
! ACAAGACAAAAAACAAAAAG+TGG + chr4_1:81299123-81299142 None:intergenic 25.0%
! AAATCTAGCATACAATTCTT+TGG + chr4_1:81299916-81299935 None:intergenic 25.0%
!! ATATTGTATGAGTTGGAATT+AGG - chr4_1:81300176-81300195 Msa0577140:intron 25.0%
!!! AGATTGCCATTTTTTTAAAG+GGG - chr4_1:81300481-81300500 Msa0577140:intron 25.0%
!! GACTCAAAGATATTATTTTC+AGG - chr4_1:81300611-81300630 Msa0577140:intron 25.0%
!!! TCAAAGATATTATTTTCAGG+AGG - chr4_1:81300614-81300633 Msa0577140:CDS 25.0%
! TACTTATAAGATAATTTCCC+AGG - chr4_1:81300821-81300840 Msa0577140:CDS 25.0%
!!! TATGGTTTTGTACGAAAAAT+AGG - chr4_1:81300898-81300917 Msa0577140:CDS 25.0%
!! AAGCAAATTTTCCTTCTATA+AGG - chr4_1:81301389-81301408 Msa0577140:intron 25.0%
!! AAATTTTCCTTCTATAAGGT+TGG - chr4_1:81301393-81301412 Msa0577140:intron 25.0%
!! AATTTTCCTTCTATAAGGTT+GGG - chr4_1:81301394-81301413 Msa0577140:intron 25.0%
! AAGTACAATACAAGAATACA+AGG + chr4_1:81301435-81301454 None:intergenic 25.0%
!! TCTAATTCTGAAGAAATTAG+TGG - chr4_1:81301469-81301488 Msa0577140:intron 25.0%
!! TGCCATTTGATTAAGTTAAT+GGG - chr4_1:81301496-81301515 Msa0577140:intron 25.0%
! TATTAAGGTTGCATTTCTAT+AGG - chr4_1:81301612-81301631 Msa0577140:intron 25.0%
!! GGTATTCTATGTTTTACTTT+CGG - chr4_1:81301783-81301802 Msa0577140:intron 25.0%
!! TCTAAAACATATCTAAACCT+AGG + chr4_1:81301861-81301880 None:intergenic 25.0%
! ATATTGATCTTAAAAACCTG+AGG - chr4_1:81302023-81302042 Msa0577140:intron 25.0%
! TATTGATCTTAAAAACCTGA+GGG - chr4_1:81302024-81302043 Msa0577140:intron 25.0%
! AGTTATAAGATAAAGCAAGA+AGG + chr4_1:81302108-81302127 None:intergenic 25.0%
! TTCAGAATTTCATAAAACAC+TGG - chr4_1:81302236-81302255 Msa0577140:intron 25.0%
! AAAATTGATCCTAAATCAGA+TGG - chr4_1:81302309-81302328 Msa0577140:intron 25.0%
! TATGGTAAATTAAATTGCGT+AGG - chr4_1:81302480-81302499 Msa0577140:intron 25.0%
! TACTCATATTGAGTTTGATT+AGG - chr4_1:81302508-81302527 Msa0577140:intron 25.0%
!!! AAAACCAAGGAAGTTTTATT+GGG - chr4_1:81302557-81302576 Msa0577140:intron 25.0%
! ATTTCTGAATGTTGAATAAG+AGG - chr4_1:81302624-81302643 Msa0577140:CDS 25.0%
!! AAGAGGCTTTTTATTCAAAT+AGG - chr4_1:81302641-81302660 Msa0577140:CDS 25.0%
!! GCTTTTTATTCAAATAGGAA+AGG - chr4_1:81302646-81302665 Msa0577140:CDS 25.0%
!!! ATGTGATTAATTTTAAGGGT+TGG - chr4_1:81302857-81302876 Msa0577140:intron 25.0%
! TATAATCCCAGTAAATTGAA+GGG + chr4_1:81303143-81303162 None:intergenic 25.0%
! AAAGATATCAAAAGTAACAG+TGG + chr4_1:81303222-81303241 None:intergenic 25.0%
! TGATTATTATATGTTACCTC+GGG - chr4_1:81303747-81303766 Msa0577140:CDS 25.0%
!!! AGGTTGATCTTTTATGATTT+TGG - chr4_1:81303948-81303967 Msa0577140:CDS 25.0%
!!! CTTTTATGATTTTGGTATGA+TGG - chr4_1:81303956-81303975 Msa0577140:CDS 25.0%
! GTTTAATAAACTACCTATTG+AGG + chr4_1:81304354-81304373 None:intergenic 25.0%
!! AGTTTTTAACACTTTTCTAG+TGG + chr4_1:81304499-81304518 None:intergenic 25.0%
! TTTAATAACGTGTCTATCTT+TGG - chr4_1:81305115-81305134 Msa0577140:intron 25.0%
! TTAATAACGTGTCTATCTTT+GGG - chr4_1:81305116-81305135 Msa0577140:intron 25.0%
! CTATATGCGACTATTAAAAT+AGG - chr4_1:81305189-81305208 Msa0577140:intron 25.0%
! TATTAAAATAGGTGAGTTCT+AGG - chr4_1:81305200-81305219 Msa0577140:intron 25.0%
! ATTAAAATAGGTGAGTTCTA+GGG - chr4_1:81305201-81305220 Msa0577140:intron 25.0%
!! TGACCAAAGTAGTTTTTATA+AGG - chr4_1:81305290-81305309 Msa0577140:intron 25.0%
! ATGCCTTATAAAAACTACTT+TGG + chr4_1:81305296-81305315 None:intergenic 25.0%
! TAGATCTAACGAATGTTAAA+GGG + chr4_1:81305332-81305351 None:intergenic 25.0%
! ATAGATCTAACGAATGTTAA+AGG + chr4_1:81305333-81305352 None:intergenic 25.0%
!! ATTAAGAAGAAGCTTTTCAT+CGG - chr4_1:81305503-81305522 Msa0577140:intron 25.0%
! TTATAGGTGATAATCAAGAA+AGG + chr4_1:81305670-81305689 None:intergenic 25.0%
!! GTAGATGACATTGTTATTAT+AGG + chr4_1:81305686-81305705 None:intergenic 25.0%
! CTTCAAATGATATAGTAGAT+AGG - chr4_1:81305847-81305866 Msa0577140:intron 25.0%
! ATATAGTAGATAGGTATGAT+GGG - chr4_1:81305856-81305875 Msa0577140:intron 25.0%
! AATCTCAGTAATATCAAAAC+GGG + chr4_1:81306287-81306306 None:intergenic 25.0%
! CAATCTCAGTAATATCAAAA+CGG + chr4_1:81306288-81306307 None:intergenic 25.0%
!! GCAAAATTTCTTTTTGTCAT+AGG + chr4_1:81306386-81306405 None:intergenic 25.0%
! ATGAGTTTGAATTATGAGAT+TGG - chr4_1:81306424-81306443 Msa0577140:intron 25.0%
!! GAATTATGAGATTGGTTAAA+AGG - chr4_1:81306432-81306451 Msa0577140:intron 25.0%
! TGAATTATAGCTCATGTAAT+TGG - chr4_1:81306484-81306503 Msa0577140:intron 25.0%
! TATGATTCTTCTGTATATAC+AGG - chr4_1:81306772-81306791 Msa0577140:intron 25.0%
! TTTGTATCGTTTGTTTGTTT+CGG - chr4_1:81306938-81306957 Msa0577140:CDS 25.0%
! TATTCTAGATCACAAATTGA+TGG - chr4_1:81306969-81306988 Msa0577140:CDS 25.0%
! GATTAAAAAAAATGGGACAT+TGG - chr4_1:81307400-81307419 Msa0577140:intron 25.0%
! AATTATCAATAACATGCATG+TGG + chr4_1:81307593-81307612 None:intergenic 25.0%
! ACAAAAGAAATATGCTATAG+TGG + chr4_1:81307837-81307856 None:intergenic 25.0%
! ATTTCAATTAGGTAATCTGA+AGG - chr4_1:81308025-81308044 Msa0577140:intron 25.0%
! TTATTTGGCAAGATTTAAGA+TGG - chr4_1:81308049-81308068 Msa0577140:CDS 25.0%
! TGCACAAAAAGAAATAAGTT+GGG + chr4_1:81308128-81308147 None:intergenic 25.0%
! TTGCACAAAAAGAAATAAGT+TGG + chr4_1:81308129-81308148 None:intergenic 25.0%
! CAATTCATTACTTTGCTTAA+AGG - chr4_1:81308348-81308367 Msa0577140:CDS 25.0%
!! TTGTGTTATTGACAAAAATG+TGG + chr4_1:81308402-81308421 None:intergenic 25.0%
! GGGAAAATTGTATTTATCAT+AGG + chr4_1:81308690-81308709 None:intergenic 25.0%
! CAAATAAATACTCACATAAC+AGG + chr4_1:81308711-81308730 None:intergenic 25.0%
AAGAAGCAATATATCTTGTG+TGG - chr4_1:81298994-81299013 Msa0577140:three_prime_UTR 30.0%
AAAAACAAAAAGTGGAAGGA+TGG + chr4_1:81299115-81299134 None:intergenic 30.0%
GACAAAAAACAAAAAGTGGA+AGG + chr4_1:81299119-81299138 None:intergenic 30.0%
TTAGTAACCACACTTATCAA+TGG - chr4_1:81299278-81299297 Msa0577140:three_prime_UTR 30.0%
! ATTTTGTGGAAACTTCGAAA+AGG - chr4_1:81299580-81299599 Msa0577140:intron 30.0%
!!! TTTGTTGTCTTGTTTTTTGC+AGG - chr4_1:81299941-81299960 Msa0577140:intron 30.0%
TTCAATTCATCTTCAAGTCT+TGG - chr4_1:81300048-81300067 Msa0577140:intron 30.0%
!! ATGTTTTTGTTCCAAACCAT+TGG - chr4_1:81300131-81300150 Msa0577140:intron 30.0%
! ATATGTTTTTCCATACGCAT+TGG + chr4_1:81300384-81300403 None:intergenic 30.0%
CGTATGGAAAAACATATGTT+GGG - chr4_1:81300387-81300406 Msa0577140:intron 30.0%
!!! GATTGCCATTTTTTTAAAGG+GGG - chr4_1:81300482-81300501 Msa0577140:intron 30.0%
GGTCCTACATTTATCAAAAT+TGG - chr4_1:81300710-81300729 Msa0577140:intron 30.0%
!! TGGCCAATTTTGATAAATGT+AGG + chr4_1:81300716-81300735 None:intergenic 30.0%
AATTGGTCAACATATTCTTG+AGG + chr4_1:81300767-81300786 None:intergenic 30.0%
! GTTTAGAATATCTTCATCCT+GGG + chr4_1:81300841-81300860 None:intergenic 30.0%
! AGTTTAGAATATCTTCATCC+TGG + chr4_1:81300842-81300861 None:intergenic 30.0%
AGGATGAAGATATTCTAAAC+TGG - chr4_1:81300841-81300860 Msa0577140:CDS 30.0%
AAGTTTCATATTAAAGCCAC+AGG + chr4_1:81301257-81301276 None:intergenic 30.0%
ACAAGAATACAAGGATAACA+AGG + chr4_1:81301426-81301445 None:intergenic 30.0%
!! GTGCCATTTGATTAAGTTAA+TGG - chr4_1:81301495-81301514 Msa0577140:intron 30.0%
AGCCCATTAACTTAATCAAA+TGG + chr4_1:81301501-81301520 None:intergenic 30.0%
!! TCTGAATTACCTGTTTTTCT+TGG - chr4_1:81301635-81301654 Msa0577140:intron 30.0%
!! TTACCTGTTTTTCTTGGTTT+AGG - chr4_1:81301641-81301660 Msa0577140:intron 30.0%
ATAATGTTTGCTTGGAAGAA+AGG - chr4_1:81301893-81301912 Msa0577140:intron 30.0%
!! ATGATGGACGTTTAATAGTA+GGG - chr4_1:81302194-81302213 Msa0577140:intron 30.0%
! GAAATTCTGAAAGTCTTCAA+AGG + chr4_1:81302227-81302246 None:intergenic 30.0%
TATTGAGTTTGATTAGGTTC+AGG - chr4_1:81302514-81302533 Msa0577140:intron 30.0%
!! GAAAACCAAGGAAGTTTTAT+TGG - chr4_1:81302556-81302575 Msa0577140:intron 30.0%
!!! AAGTTTTATTGGGTCATGAA+AGG - chr4_1:81302567-81302586 Msa0577140:intron 30.0%
!!! AGTTTTATTGGGTCATGAAA+GGG - chr4_1:81302568-81302587 Msa0577140:intron 30.0%
! AATTTTACCTGGATAGCTAA+TGG - chr4_1:81302724-81302743 Msa0577140:intron 30.0%
TAAATGAAATGCTTCAGCAA+TGG - chr4_1:81302786-81302805 Msa0577140:intron 30.0%
CGTAGACAACATATAAACAA+CGG - chr4_1:81302882-81302901 Msa0577140:intron 30.0%
GTAGACAACATATAAACAAC+GGG - chr4_1:81302883-81302902 Msa0577140:intron 30.0%
! GACACGAATAAACATTTTTC+AGG - chr4_1:81303041-81303060 Msa0577140:intron 30.0%
GTATAATCCCAGTAAATTGA+AGG + chr4_1:81303144-81303163 None:intergenic 30.0%
! CAGATTCTATTAACCTTTTC+CGG + chr4_1:81303354-81303373 None:intergenic 30.0%
ACTGTATGCAAAATCACTAT+TGG - chr4_1:81303378-81303397 Msa0577140:CDS 30.0%
TGTATATATTAGTTACCCAC+AGG + chr4_1:81303877-81303896 None:intergenic 30.0%
ATCAGTCAAAATATCAGAGA+AGG - chr4_1:81304089-81304108 Msa0577140:intron 30.0%
! GGTTTACTTGAAGCTTTTTA+TGG - chr4_1:81304110-81304129 Msa0577140:intron 30.0%
! TAGAGTGTTCAAGACAATAT+GGG + chr4_1:81304189-81304208 None:intergenic 30.0%
GGTAGTTTATTAAACCACTT+TGG - chr4_1:81304359-81304378 Msa0577140:CDS 30.0%
TTTGGATGTATAATCCAAAG+TGG + chr4_1:81304376-81304395 None:intergenic 30.0%
TGTAAGCGAATATTGCTATA+TGG - chr4_1:81304430-81304449 Msa0577140:intron 30.0%
TGAGGAATATAGCGATATTA+GGG - chr4_1:81304609-81304628 Msa0577140:CDS 30.0%
AATATAGCGATATTAGGGTT+GGG - chr4_1:81304614-81304633 Msa0577140:CDS 30.0%
ATAAACCTTAATGAGGACTA+TGG + chr4_1:81304730-81304749 None:intergenic 30.0%
ACAAGTCATAAACCTTAATG+AGG + chr4_1:81304737-81304756 None:intergenic 30.0%
!!! AAAAAAGCTGCTAGTTTTCA+AGG + chr4_1:81304765-81304784 None:intergenic 30.0%
! TGACTACTTGTCGATATTTT+AGG - chr4_1:81304838-81304857 Msa0577140:intron 30.0%
! TTCTTTCCTCGCTAATATTT+TGG - chr4_1:81304869-81304888 Msa0577140:intron 30.0%
ATTCAAAAAGCCATTAAGCA+AGG - chr4_1:81305037-81305056 Msa0577140:intron 30.0%
CCAACTACATAAGCAATAAT+TGG + chr4_1:81305169-81305188 None:intergenic 30.0%
CCAATTATTGCTTATGTAGT+TGG - chr4_1:81305166-81305185 Msa0577140:intron 30.0%
TCTAGGGAAAAAATAGTGTT+TGG - chr4_1:81305217-81305236 Msa0577140:intron 30.0%
CTAGGGAAAAAATAGTGTTT+GGG - chr4_1:81305218-81305237 Msa0577140:intron 30.0%
AAAAACAAGAAGCTGAAAGA+AGG + chr4_1:81305389-81305408 None:intergenic 30.0%
!! TCTTTTGAAAAAGACAAGGT+CGG + chr4_1:81305423-81305442 None:intergenic 30.0%
!! CATCTCTTTTGAAAAAGACA+AGG + chr4_1:81305427-81305446 None:intergenic 30.0%
!!! CTTGTCTTTTTCAAAAGAGA+TGG - chr4_1:81305425-81305444 Msa0577140:intron 30.0%
AAAAGCTTCTTCTTAATCAG+GGG + chr4_1:81305500-81305519 None:intergenic 30.0%
GAAAAGCTTCTTCTTAATCA+GGG + chr4_1:81305501-81305520 None:intergenic 30.0%
TGAAAAGCTTCTTCTTAATC+AGG + chr4_1:81305502-81305521 None:intergenic 30.0%
! TTAAGAAGAAGCTTTTCATC+GGG - chr4_1:81305504-81305523 Msa0577140:intron 30.0%
!!! ACAATTTGACTTGACTTTTG+AGG + chr4_1:81305771-81305790 None:intergenic 30.0%
GATATAGTAGATAGGTATGA+TGG - chr4_1:81305855-81305874 Msa0577140:intron 30.0%
! ATGATGGGAAGGTTATAAAT+AGG - chr4_1:81305871-81305890 Msa0577140:intron 30.0%
TGATGGGAAGGTTATAAATA+GGG - chr4_1:81305872-81305891 Msa0577140:intron 30.0%
TCTAACAACAAATGTGAATG+TGG + chr4_1:81306141-81306160 None:intergenic 30.0%
! CAGTAATATTTTACCTGAGA+AGG + chr4_1:81306165-81306184 None:intergenic 30.0%
! TGAACATTTTTCTGCAGTTT+TGG - chr4_1:81306237-81306256 Msa0577140:intron 30.0%
ATCTCAGTAATATCAAAACG+GGG + chr4_1:81306286-81306305 None:intergenic 30.0%
TCAAACTCATATTAACCATG+TGG + chr4_1:81306414-81306433 None:intergenic 30.0%
! ATTGGAACATTTTTACCCAT+AGG - chr4_1:81306502-81306521 Msa0577140:intron 30.0%
AGGAGTTGAAGTTATCATAA+AGG - chr4_1:81306681-81306700 Msa0577140:intron 30.0%
! TTATTTGTTGGGGTTTGATT+TGG - chr4_1:81307140-81307159 Msa0577140:intron 30.0%
!! TCATTCTTGCTTTTATGCAT+GGG - chr4_1:81307195-81307214 Msa0577140:intron 30.0%
CAGGTAAGCTTATTTAATGT+AGG + chr4_1:81307343-81307362 None:intergenic 30.0%
! TAGTTGCATCTTATCTTTTC+AGG - chr4_1:81307805-81307824 Msa0577140:intron 30.0%
! TATTTCTTTTGTGCGATCTT+TGG - chr4_1:81307845-81307864 Msa0577140:intron 30.0%
!!! TTTGGTTTTCAAGTTCTCTT+GGG - chr4_1:81307863-81307882 Msa0577140:intron 30.0%
AGATCAAGAAGTTAGATGAA+CGG - chr4_1:81307894-81307913 Msa0577140:intron 30.0%
AGGTAATCTGAAGGATTATT+TGG - chr4_1:81308034-81308053 Msa0577140:CDS 30.0%
GCACAAAAAGAAATAAGTTG+GGG + chr4_1:81308127-81308146 None:intergenic 30.0%
CATTACTTTGCTTAAAGGAT+CGG - chr4_1:81308353-81308372 Msa0577140:CDS 30.0%
ATTACTTTGCTTAAAGGATC+GGG - chr4_1:81308354-81308373 Msa0577140:CDS 30.0%
ATATATTTATGGAAGGAGAG+GGG + chr4_1:81308427-81308446 None:intergenic 30.0%
GATATATTTATGGAAGGAGA+GGG + chr4_1:81308428-81308447 None:intergenic 30.0%
GAGTACCATATAGTATGATA+TGG - chr4_1:81308550-81308569 Msa0577140:five_prime_UTR 30.0%
CTTCCAATAAATTTGACATC+AGG - chr4_1:81308573-81308592 Msa0577140:five_prime_UTR 30.0%
CTTCCTGATGTCAAATTTAT+TGG + chr4_1:81308579-81308598 None:intergenic 30.0%
AGTATTTACCAACCATCTAT+TGG - chr4_1:81308650-81308669 Msa0577140:five_prime_UTR 30.0%
!! GGTTTTTGGAGGAATGTTAT+TGG + chr4_1:81299050-81299069 None:intergenic 35.0%
!! AACTCAAACCCTAGTTTTCA+TGG + chr4_1:81299239-81299258 None:intergenic 35.0%
GTTACTAAAATGAGAGACTG+AGG + chr4_1:81299266-81299285 None:intergenic 35.0%
TCTGTTAGAGGTTATGTGAA+TGG - chr4_1:81299504-81299523 Msa0577140:three_prime_UTR 35.0%
! AGCTTGGTGAAATATGTGAA+TGG - chr4_1:81299528-81299547 Msa0577140:intron 35.0%
GTGAAATATGTGAATGGCAA+TGG - chr4_1:81299534-81299553 Msa0577140:intron 35.0%
! GGAAGTTGTTGAAGATTTTG+TGG - chr4_1:81299566-81299585 Msa0577140:intron 35.0%
TCCAAAGAACGTTGGAAATT+TGG - chr4_1:81300015-81300034 Msa0577140:CDS 35.0%
CCAAAGAACGTTGGAAATTT+GGG - chr4_1:81300016-81300035 Msa0577140:CDS 35.0%
CAAAGAACGTTGGAAATTTG+GGG - chr4_1:81300017-81300036 Msa0577140:CDS 35.0%
AAAGAACGTTGGAAATTTGG+GGG - chr4_1:81300018-81300037 Msa0577140:CDS 35.0%
CGTCAGAAGTTCTCTTATAA+AGG - chr4_1:81300077-81300096 Msa0577140:intron 35.0%
CATCGTCATATTGTATGAGT+TGG - chr4_1:81300169-81300188 Msa0577140:intron 35.0%
TTGACACATTGTGATACAAG+TGG - chr4_1:81300313-81300332 Msa0577140:intron 35.0%
GCGTATGGAAAAACATATGT+TGG - chr4_1:81300386-81300405 Msa0577140:intron 35.0%
TAAGGTATACTCATGCACAA+CGG + chr4_1:81300462-81300481 None:intergenic 35.0%
! TACAGCCCCCTTTAAAAAAA+TGG + chr4_1:81300490-81300509 None:intergenic 35.0%
!!! TTTTTTTAAAGGGGGCTGTA+AGG - chr4_1:81300490-81300509 Msa0577140:intron 35.0%
! CCTTAAGGTTTTCTTTTCCT+CGG + chr4_1:81300645-81300664 None:intergenic 35.0%
AATGCTTTCCTTAAGCCATT+TGG + chr4_1:81300681-81300700 None:intergenic 35.0%
! TAACCTGAAGTTCTGACAAT+TGG + chr4_1:81300784-81300803 None:intergenic 35.0%
CGAAAAATAGGAAATTTCCC+TGG - chr4_1:81300910-81300929 Msa0577140:intron 35.0%
TCAATGGACATTAGTATGCA+GGG + chr4_1:81301203-81301222 None:intergenic 35.0%
! AATAGTTTGTAAGTGCAGCT+CGG + chr4_1:81301234-81301253 None:intergenic 35.0%
!!! TAGTTTTTTCCTGCTGAAGA+TGG + chr4_1:81301565-81301584 None:intergenic 35.0%
GATCCTAAACCAAGAAAAAC+AGG + chr4_1:81301647-81301666 None:intergenic 35.0%
AGAAATCATGCAATCAAAGC+AGG - chr4_1:81301818-81301837 Msa0577140:intron 35.0%
AAACCTGATTAAATGCACCT+AGG - chr4_1:81301841-81301860 Msa0577140:intron 35.0%
AAACCTAGGTGCATTTAATC+AGG + chr4_1:81301847-81301866 None:intergenic 35.0%
! ATTATCTTTTTCCGCAATGC+AGG - chr4_1:81301923-81301942 Msa0577140:intron 35.0%
! GAAGACTTGTCAATTTTTGC+AGG + chr4_1:81302139-81302158 None:intergenic 35.0%
!!! CTATTTTTTCCGTTGCATGA+TGG - chr4_1:81302178-81302197 Msa0577140:intron 35.0%
ATTAAACGTCCATCATGCAA+CGG + chr4_1:81302190-81302209 None:intergenic 35.0%
!! CATGATGGACGTTTAATAGT+AGG - chr4_1:81302193-81302212 Msa0577140:intron 35.0%
! TTCTGAAAGTCTTCAAAGGT+TGG + chr4_1:81302223-81302242 None:intergenic 35.0%
GAAGATATTCTGCAATAACC+TGG + chr4_1:81302287-81302306 None:intergenic 35.0%
TAAATCAGATGGTGCAAAGA+GGG - chr4_1:81302320-81302339 Msa0577140:intron 35.0%
! GTGTGCATCTGTTTTATATC+AGG - chr4_1:81302365-81302384 Msa0577140:intron 35.0%
TTTGATTAGGTTCAGGTGAA+TGG - chr4_1:81302521-81302540 Msa0577140:intron 35.0%
ATGACCCAATAAAACTTCCT+TGG + chr4_1:81302564-81302583 None:intergenic 35.0%
! TTGTTTTCACAGAAGGGATA+CGG - chr4_1:81302693-81302712 Msa0577140:CDS 35.0%
ATGGCATGAAATGGAAGATT+AGG - chr4_1:81302743-81302762 Msa0577140:intron 35.0%
AAAGATTTGCAACTGAAACC+CGG + chr4_1:81302952-81302971 None:intergenic 35.0%
! AACAGGATCAGATTAAGTTG+TGG + chr4_1:81303016-81303035 None:intergenic 35.0%
TTTATTCGTGTCACATCAAC+AGG + chr4_1:81303033-81303052 None:intergenic 35.0%
TCAGGAGATTGATTACACTA+AGG - chr4_1:81303059-81303078 Msa0577140:intron 35.0%
! TGCAAGCAACTTTAAGAACA+TGG - chr4_1:81303104-81303123 Msa0577140:intron 35.0%
TGAAAGTCCCTTCAATTTAC+TGG - chr4_1:81303133-81303152 Msa0577140:intron 35.0%
GAAAGTCCCTTCAATTTACT+GGG - chr4_1:81303134-81303153 Msa0577140:intron 35.0%
AAATTAAGGTTGAACCTGTG+GGG + chr4_1:81303169-81303188 None:intergenic 35.0%
GAAATTAAGGTTGAACCTGT+GGG + chr4_1:81303170-81303189 None:intergenic 35.0%
AGAAATTAAGGTTGAACCTG+TGG + chr4_1:81303171-81303190 None:intergenic 35.0%
TCCAATGCAGATTCTAACAA+TGG - chr4_1:81303270-81303289 Msa0577140:intron 35.0%
TCCATTGTTAGAATCTGCAT+TGG + chr4_1:81303274-81303293 None:intergenic 35.0%
TAACAATGGAGTATGTTCCA+GGG - chr4_1:81303284-81303303 Msa0577140:intron 35.0%
!! AATACAAGCTTTAGATCAGC+TGG - chr4_1:81303321-81303340 Msa0577140:intron 35.0%
!! ATACAAGCTTTAGATCAGCT+GGG - chr4_1:81303322-81303341 Msa0577140:intron 35.0%
CGGAAAAGGTTAATAGAATC+TGG - chr4_1:81303352-81303371 Msa0577140:intron 35.0%
AAGATGCACACACAAGTAAA+AGG + chr4_1:81303411-81303430 None:intergenic 35.0%
! TTCTAGAGACAAGAACATAC+AGG + chr4_1:81303562-81303581 None:intergenic 35.0%
!! ATGATTTTGGTATGATGGGA+AGG - chr4_1:81303961-81303980 Msa0577140:CDS 35.0%
ACTTCCTTTGCAATTGTGAT+TGG - chr4_1:81304050-81304069 Msa0577140:intron 35.0%
AACACCAATCACAATTGCAA+AGG + chr4_1:81304057-81304076 None:intergenic 35.0%
!!! ATGATACTGTTTTTTCCGGA+TGG - chr4_1:81304161-81304180 Msa0577140:CDS 35.0%
!!! TGATACTGTTTTTTCCGGAT+GGG - chr4_1:81304162-81304181 Msa0577140:CDS 35.0%
! CTAGAGTGTTCAAGACAATA+TGG + chr4_1:81304190-81304209 None:intergenic 35.0%
CTTGATGCAATGATTCAGAT+GGG - chr4_1:81304274-81304293 Msa0577140:intron 35.0%
! AAACTTTTGCTCGTTAGTTG+TGG - chr4_1:81304550-81304569 Msa0577140:CDS 35.0%
GTGAGGAATATAGCGATATT+AGG - chr4_1:81304608-81304627 Msa0577140:CDS 35.0%
GAATATAGCGATATTAGGGT+TGG - chr4_1:81304613-81304632 Msa0577140:CDS 35.0%
!! TGTTTGTTGGCTTCATTGAT+AGG - chr4_1:81304688-81304707 Msa0577140:intron 35.0%
TATCACCATAGTCCTCATTA+AGG - chr4_1:81304722-81304741 Msa0577140:intron 35.0%
CCTAAACCAAAATATTAGCG+AGG + chr4_1:81304878-81304897 None:intergenic 35.0%
!!! CCTCGCTAATATTTTGGTTT+AGG - chr4_1:81304875-81304894 Msa0577140:intron 35.0%
!!! TTTTAGTTTTGAAGAACGCC+TGG - chr4_1:81304971-81304990 Msa0577140:intron 35.0%
ACTTGTTCTTCCTTGCTTAA+TGG + chr4_1:81305050-81305069 None:intergenic 35.0%
AATGAAGAAGAAAGAACGTC+TGG - chr4_1:81305070-81305089 Msa0577140:intron 35.0%
AAAAATAGTGTTTGGGCTAC+TGG - chr4_1:81305225-81305244 Msa0577140:intron 35.0%
CTTTGGTCATATCTACAATG+TGG + chr4_1:81305279-81305298 None:intergenic 35.0%
TAACGAATGTTAAAGGGATG+AGG + chr4_1:81305326-81305345 None:intergenic 35.0%
!! CTTTTGAAAAAGACAAGGTC+GGG + chr4_1:81305422-81305441 None:intergenic 35.0%
! TAAGAAGAAGCTTTTCATCG+GGG - chr4_1:81305505-81305524 Msa0577140:intron 35.0%
! TCTTAGAGAAGGTATGAACT+CGG + chr4_1:81305584-81305603 None:intergenic 35.0%
!! CTGATGCTATTTCTTAGAGA+AGG + chr4_1:81305595-81305614 None:intergenic 35.0%
GTTTGGACAAATGTTACAAG+AGG + chr4_1:81305966-81305985 None:intergenic 35.0%
GTAACATTTGTCCAAACTCT+AGG - chr4_1:81305969-81305988 Msa0577140:CDS 35.0%
AATAACATTATGCAGTCCAG+AGG - chr4_1:81306031-81306050 Msa0577140:intron 35.0%
ATGACTCTCATCCTTTAAAC+AGG - chr4_1:81306068-81306087 Msa0577140:intron 35.0%
ACAAATCTTCGCCTGTTTAA+AGG + chr4_1:81306082-81306101 None:intergenic 35.0%
GCAAGTAACTGCAAAATAAC+AGG - chr4_1:81306214-81306233 Msa0577140:intron 35.0%
!!! CATTTTTCTGCAGTTTTGGA+TGG - chr4_1:81306241-81306260 Msa0577140:intron 35.0%
AAATATGAAGACAGCACTCA+CGG + chr4_1:81306316-81306335 None:intergenic 35.0%
ACTCATATTAACCATGTGGT+TGG + chr4_1:81306410-81306429 None:intergenic 35.0%
GCTATAATTCAGATCCTCAA+AGG + chr4_1:81306475-81306494 None:intergenic 35.0%
TAGTAAATTGGAGACCTGAA+AGG + chr4_1:81306561-81306580 None:intergenic 35.0%
TACAGGACATCAAAAAGAGA+TGG - chr4_1:81306789-81306808 Msa0577140:intron 35.0%
ACAGGACATCAAAAAGAGAT+GGG - chr4_1:81306790-81306809 Msa0577140:intron 35.0%
CAACTGTGCAGAAAACAATT+GGG - chr4_1:81307073-81307092 Msa0577140:intron 35.0%
TGAAGCTGTCTAATAACAGT+GGG - chr4_1:81307104-81307123 Msa0577140:intron 35.0%
TGACACACATGAACATTTAC+AGG + chr4_1:81307178-81307197 None:intergenic 35.0%
!! GTCATTCTTGCTTTTATGCA+TGG - chr4_1:81307194-81307213 Msa0577140:intron 35.0%
CTGCCTGTTAATAGACAAAA+GGG + chr4_1:81307645-81307664 None:intergenic 35.0%
ACTGCCTGTTAATAGACAAA+AGG + chr4_1:81307646-81307665 None:intergenic 35.0%
TTTGTCTATTAACAGGCAGT+AGG - chr4_1:81307646-81307665 Msa0577140:CDS 35.0%
AAGAAATATGCTATAGTGGC+AGG + chr4_1:81307833-81307852 None:intergenic 35.0%
!!! CTTTGGTTTTCAAGTTCTCT+TGG - chr4_1:81307862-81307881 Msa0577140:intron 35.0%
GATCAAGAAGTTAGATGAAC+GGG - chr4_1:81307895-81307914 Msa0577140:intron 35.0%
!!! CATTGCCTTTTGGTTTAACT+TGG - chr4_1:81308156-81308175 Msa0577140:CDS 35.0%
ATGAGCCAAGTTAAACCAAA+AGG + chr4_1:81308164-81308183 None:intergenic 35.0%
TGTTGCTCATGTTAAGTTCA+TGG - chr4_1:81308204-81308223 Msa0577140:CDS 35.0%
! TAACCTTCAGAGCATCAATT+AGG - chr4_1:81308235-81308254 Msa0577140:CDS 35.0%
TATATTTATGGAAGGAGAGG+GGG + chr4_1:81308426-81308445 None:intergenic 35.0%
GGATATATTTATGGAAGGAG+AGG + chr4_1:81308429-81308448 None:intergenic 35.0%
!! ATAGTAAGTGTTACTTGACC+TGG + chr4_1:81308453-81308472 None:intergenic 35.0%
GGAAGCCATATCATACTATA+TGG + chr4_1:81308558-81308577 None:intergenic 35.0%
TGTAACTGAGGTGCATAAAT+TGG - chr4_1:81308606-81308625 Msa0577140:five_prime_UTR 35.0%
TTTACCAACCATCTATTGGA+AGG - chr4_1:81308654-81308673 Msa0577140:five_prime_UTR 35.0%
ACTTAGATCCTTCCAATAGA+TGG + chr4_1:81308665-81308684 None:intergenic 35.0%
CAATATATCTTGTGTGGCTG+AGG - chr4_1:81299000-81299019 Msa0577140:three_prime_UTR 40.0%
TTGGAGGAATGTTATTGGTG+CGG + chr4_1:81299045-81299064 None:intergenic 40.0%
! AGATGAGCTACGAAGGTTTT+TGG + chr4_1:81299064-81299083 None:intergenic 40.0%
AGGTTAAAGATGAGCTACGA+AGG + chr4_1:81299071-81299090 None:intergenic 40.0%
AGTGGAAGGATGGAATATGA+TGG + chr4_1:81299105-81299124 None:intergenic 40.0%
GAAGAAGCCATTGATAAGTG+TGG + chr4_1:81299288-81299307 None:intergenic 40.0%
!! CGACGTTTTGGTGTAAATTG+AGG + chr4_1:81299348-81299367 None:intergenic 40.0%
TTCAAAGCACGAATTCGAGT+GGG + chr4_1:81299399-81299418 None:intergenic 40.0%
!! ATTCGTGCTTTGAAGGAAGA+AGG - chr4_1:81299405-81299424 Msa0577140:three_prime_UTR 40.0%
! TTTGAAGGAAGAAGGTGCAT+TGG - chr4_1:81299413-81299432 Msa0577140:three_prime_UTR 40.0%
!! TGCATTGGTTGAAGAAAGAG+TGG - chr4_1:81299428-81299447 Msa0577140:three_prime_UTR 40.0%
GATGTGAAATGGAGTGGAAA+CGG - chr4_1:81299456-81299475 Msa0577140:three_prime_UTR 40.0%
AGTGTTGTCAATGGTAGCAA+TGG - chr4_1:81299480-81299499 Msa0577140:three_prime_UTR 40.0%
AGGTTATGTGAATGGAAGCT+TGG - chr4_1:81299512-81299531 Msa0577140:intron 40.0%
ATATGTGAATGGCAATGGTG+TGG - chr4_1:81299539-81299558 Msa0577140:intron 40.0%
TGTGGAAACTTCGAAAAGGA+AGG - chr4_1:81299584-81299603 Msa0577140:intron 40.0%
ACTTCGAAAAGGAAGGAAGT+TGG - chr4_1:81299591-81299610 Msa0577140:intron 40.0%
CTTCGAAAAGGAAGGAAGTT+GGG - chr4_1:81299592-81299611 Msa0577140:intron 40.0%
AAGAAGAGGTTGGAAGAGAT+TGG - chr4_1:81299618-81299637 Msa0577140:intron 40.0%
AGATTGGAAAAGAAGATGCG+TGG - chr4_1:81299634-81299653 Msa0577140:intron 40.0%
GATGCGTGGTTCAAACAAAA+TGG - chr4_1:81299648-81299667 Msa0577140:intron 40.0%
CAAACAAAATGGTGAACCAC+AGG - chr4_1:81299659-81299678 Msa0577140:intron 40.0%
TGTCTATATCAGTGCTTGCT+AGG - chr4_1:81299847-81299866 Msa0577140:CDS 40.0%
! GCTTGCTAGGTTTGATGATT+TGG - chr4_1:81299860-81299879 Msa0577140:CDS 40.0%
!!! GTTGTCTTGTTTTTTGCAGG+TGG - chr4_1:81299944-81299963 Msa0577140:intron 40.0%
CCCAAATTTCCAACGTTCTT+TGG + chr4_1:81300019-81300038 None:intergenic 40.0%
ACAGCATGTTTCCAATGGTT+TGG + chr4_1:81300145-81300164 None:intergenic 40.0%
GCTTAACAGCATGTTTCCAA+TGG + chr4_1:81300150-81300169 None:intergenic 40.0%
GCTTATAGCCTAATCTGACT+CGG - chr4_1:81300270-81300289 Msa0577140:intron 40.0%
AACTTAGACCGAGTCAGATT+AGG + chr4_1:81300281-81300300 None:intergenic 40.0%
CTCCTTAACCATTTGGTCAA+GGG - chr4_1:81300348-81300367 Msa0577140:intron 40.0%
TACCCTTGACCAAATGGTTA+AGG + chr4_1:81300353-81300372 None:intergenic 40.0%
CCGAGGAAAAGAAAACCTTA+AGG - chr4_1:81300642-81300661 Msa0577140:CDS 40.0%
TTCCTTAAGCCATTTGGCAA+GGG + chr4_1:81300675-81300694 None:intergenic 40.0%
TTTCCTTAAGCCATTTGGCA+AGG + chr4_1:81300676-81300695 None:intergenic 40.0%
TGACCAATTGTCAGAACTTC+AGG - chr4_1:81300778-81300797 Msa0577140:intron 40.0%
! GTCAGAACTTCAGGTTAAGT+TGG - chr4_1:81300787-81300806 Msa0577140:intron 40.0%
!!! GAATGTGTGCCGTTTCTTTT+GGG - chr4_1:81301104-81301123 Msa0577140:intron 40.0%
GCTACTTGACCCAAAAGAAA+CGG + chr4_1:81301116-81301135 None:intergenic 40.0%
CAATGGACATTAGTATGCAG+GGG + chr4_1:81301202-81301221 None:intergenic 40.0%
CTCAATGGACATTAGTATGC+AGG + chr4_1:81301204-81301223 None:intergenic 40.0%
GCACTTACAAACTATTCCTG+TGG - chr4_1:81301238-81301257 Msa0577140:intron 40.0%
TTTCCTTCTATAAGGTTGGG+TGG - chr4_1:81301397-81301416 Msa0577140:intron 40.0%
TTCCTTCTATAAGGTTGGGT+GGG - chr4_1:81301398-81301417 Msa0577140:CDS 40.0%
ACGATAAAACCATCTTCAGC+AGG - chr4_1:81301553-81301572 Msa0577140:CDS 40.0%
TGATCAAATATGCCAGCGAT+AGG + chr4_1:81301729-81301748 None:intergenic 40.0%
AGGTTGTTATCAAGGTGCAA+AGG - chr4_1:81301978-81301997 Msa0577140:intron 40.0%
TCAAAAAGATCCTTGAGACC+AGG + chr4_1:81302004-81302023 None:intergenic 40.0%
CTCTTTGCACCATCTGATTT+AGG + chr4_1:81302321-81302340 None:intergenic 40.0%
CTAAATCAGATGGTGCAAAG+AGG - chr4_1:81302319-81302338 Msa0577140:intron 40.0%
TTAGGTTCAGGTGAATGGAA+TGG - chr4_1:81302526-81302545 Msa0577140:intron 40.0%
AGGTGAATGGAATGGCATAT+GGG - chr4_1:81302534-81302553 Msa0577140:intron 40.0%
AATGGCATATGGGAAAACCA+AGG - chr4_1:81302544-81302563 Msa0577140:intron 40.0%
!! AGCTGAGTTGTTTTCACAGA+AGG - chr4_1:81302686-81302705 Msa0577140:CDS 40.0%
!! GCTGAGTTGTTTTCACAGAA+GGG - chr4_1:81302687-81302706 Msa0577140:CDS 40.0%
AGCTATCCAGGTAAAATTGC+AGG + chr4_1:81302722-81302741 None:intergenic 40.0%
TTTCATGCCATTAGCTATCC+AGG + chr4_1:81302734-81302753 None:intergenic 40.0%
GGATAGCTAATGGCATGAAA+TGG - chr4_1:81302734-81302753 Msa0577140:intron 40.0%
TAGACTTTAGCAATAGCTGC+AGG - chr4_1:81302913-81302932 Msa0577140:intron 40.0%
TTTAGCAATAGCTGCAGGTT+GGG - chr4_1:81302918-81302937 Msa0577140:intron 40.0%
GCAAACATCGTACTGAAACA+AGG + chr4_1:81302976-81302995 None:intergenic 40.0%
GGAGATTGATTACACTAAGG+AGG - chr4_1:81303062-81303081 Msa0577140:intron 40.0%
CTAACAATGGAGTATGTTCC+AGG - chr4_1:81303283-81303302 Msa0577140:intron 40.0%
! ACGTTTTCGTTATCTTCCAC+AGG - chr4_1:81303470-81303489 Msa0577140:intron 40.0%
GAGACAAGAACATACAGGAT+CGG + chr4_1:81303557-81303576 None:intergenic 40.0%
AATATTTCCAGGATGCTGCA+TGG + chr4_1:81303904-81303923 None:intergenic 40.0%
! TCATCGACTGCAATATTTCC+AGG + chr4_1:81303915-81303934 None:intergenic 40.0%
ATTGCAGTCGATGATGTCAA+TGG - chr4_1:81303921-81303940 Msa0577140:CDS 40.0%
CCATCTGAATCATTGCATCA+AGG + chr4_1:81304276-81304295 None:intergenic 40.0%
CCTTGATGCAATGATTCAGA+TGG - chr4_1:81304273-81304292 Msa0577140:intron 40.0%
TCCAAAGTGCAAACATTGAG+AGG - chr4_1:81304390-81304409 Msa0577140:CDS 40.0%
ACCTCTCAATGTTTGCACTT+TGG + chr4_1:81304394-81304413 None:intergenic 40.0%
! ATTGACTTAAGTGCCTTCAC+AGG - chr4_1:81304463-81304482 Msa0577140:intron 40.0%
!! ATGTGCTGATTAGTCATGTG+AGG - chr4_1:81304591-81304610 Msa0577140:CDS 40.0%
TCGAAGCAGTTTGAACATAC+CGG + chr4_1:81304644-81304663 None:intergenic 40.0%
TTCAAACTGCTTCGACTCAA+AGG - chr4_1:81304649-81304668 Msa0577140:intron 40.0%
CAGCTGATATAGTAGTTCAG+TGG + chr4_1:81304911-81304930 None:intergenic 40.0%
ACAAAGGAGAGAGAAAGAGA+TGG - chr4_1:81304998-81305017 Msa0577140:intron 40.0%
!! GGCTGCTATTGGTAATGTAT+CGG - chr4_1:81305091-81305110 Msa0577140:intron 40.0%
!! GCTGCTATTGGTAATGTATC+GGG - chr4_1:81305092-81305111 Msa0577140:intron 40.0%
CAAGCCAGATGATACTCATA+TGG + chr4_1:81305532-81305551 None:intergenic 40.0%
AAGGTATGAACTCGGTATTC+TGG + chr4_1:81305576-81305595 None:intergenic 40.0%
! AGTAGATAGGTATGATGGGA+AGG - chr4_1:81305860-81305879 Msa0577140:intron 40.0%
GGAAGGTTATAAATAGGGTG+AGG - chr4_1:81305877-81305896 Msa0577140:intron 40.0%
TATTGCCCAAACATGGTTTG+GGG + chr4_1:81305938-81305957 None:intergenic 40.0%
CTATTGCCCAAACATGGTTT+GGG + chr4_1:81305939-81305958 None:intergenic 40.0%
ATAAGCAAGTGAAAAGCCTC+TGG + chr4_1:81306050-81306069 None:intergenic 40.0%
ACAACAAATGTGAATGTGGC+AGG + chr4_1:81306137-81306156 None:intergenic 40.0%
!! TTTGTTGTTAGAGCCTTCTC+AGG - chr4_1:81306149-81306168 Msa0577140:intron 40.0%
TTACTTGCGTAGAACATGCA+CGG + chr4_1:81306202-81306221 None:intergenic 40.0%
!!! AGTTTTGGATGGCATTGGAA+AGG - chr4_1:81306252-81306271 Msa0577140:intron 40.0%
!! GTTTTGGATGGCATTGGAAA+GGG - chr4_1:81306253-81306272 Msa0577140:intron 40.0%
! GAAATTTTGCACCAACCACA+TGG - chr4_1:81306396-81306415 Msa0577140:intron 40.0%
! CGTGCATAGTTTCTGTTTCT+TGG - chr4_1:81306535-81306554 Msa0577140:intron 40.0%
! TTTCTGTTTCTTGGCCTTTC+AGG - chr4_1:81306544-81306563 Msa0577140:intron 40.0%
AACTCCAGAGCATAACTACA+AGG + chr4_1:81306643-81306662 None:intergenic 40.0%
ACTTATTTAGACAGGCTGAC+AGG - chr4_1:81306837-81306856 Msa0577140:intron 40.0%
CTTATTTAGACAGGCTGACA+GGG - chr4_1:81306838-81306857 Msa0577140:intron 40.0%
GGCTAATGTTATTGAGCGTT+TGG - chr4_1:81306871-81306890 Msa0577140:intron 40.0%
!! GATGGATTTCATTTTCCCAC+AGG - chr4_1:81306987-81307006 Msa0577140:CDS 40.0%
GCAACTGTGCAGAAAACAAT+TGG - chr4_1:81307072-81307091 Msa0577140:intron 40.0%
GTGAAGCTGTCTAATAACAG+TGG - chr4_1:81307103-81307122 Msa0577140:intron 40.0%
GGCAACAACTCATGAAACTA+TGG - chr4_1:81307286-81307305 Msa0577140:intron 40.0%
AAAACCAACACACACATGCA+AGG + chr4_1:81307433-81307452 None:intergenic 40.0%
CCTGTTAATAGACAAAAGGG+AGG + chr4_1:81307642-81307661 None:intergenic 40.0%
! CCTCCCTTTTGTCTATTAAC+AGG - chr4_1:81307639-81307658 Msa0577140:CDS 40.0%
CTTCTCACTTGTCTTTCTTG+TGG - chr4_1:81307733-81307752 Msa0577140:intron 40.0%
AACGGGAACAACTGATTACA+GGG - chr4_1:81307912-81307931 Msa0577140:intron 40.0%
! AAATAAGTTGGGGCATGTCA+AGG + chr4_1:81308117-81308136 None:intergenic 40.0%
! CAACTTGTCTCATTGCCTTT+TGG - chr4_1:81308146-81308165 Msa0577140:CDS 40.0%
ACCTGATGTCTCAAGATGTT+TGG + chr4_1:81308276-81308295 None:intergenic 40.0%
GGTGTGCAAAAACATTCAAC+TGG - chr4_1:81308293-81308312 Msa0577140:CDS 40.0%
ACTGGAAGTTGCAGTTATAC+TGG - chr4_1:81308311-81308330 Msa0577140:CDS 40.0%
! CTGGCGGATATATTTATGGA+AGG + chr4_1:81308434-81308453 None:intergenic 40.0%
CTTCCATAAATATATCCGCC+AGG - chr4_1:81308432-81308451 Msa0577140:five_prime_UTR 40.0%
! TGACCTGGCGGATATATTTA+TGG + chr4_1:81308438-81308457 None:intergenic 40.0%
GGAAGCTATACTTGTAACTG+AGG - chr4_1:81308594-81308613 Msa0577140:five_prime_UTR 40.0%
AGATCCTTCCAATAGATGGT+TGG + chr4_1:81308661-81308680 None:intergenic 40.0%
ATATTGCTTCTTCCGTTGCG+TGG + chr4_1:81298986-81299005 None:intergenic 45.0%
TTATTGGTGCGGAGATTTCG+CGG + chr4_1:81299034-81299053 None:intergenic 45.0%
!! TGAGCTACGAAGGTTTTTGG+AGG + chr4_1:81299061-81299080 None:intergenic 45.0%
! TGGAATATGATGGTGACACG+TGG + chr4_1:81299095-81299114 None:intergenic 45.0%
! GAGAGTGTGAAACGAAAGAG+TGG + chr4_1:81299194-81299213 None:intergenic 45.0%
! GAGTTAGAACGACGACGTTT+TGG + chr4_1:81299360-81299379 None:intergenic 45.0%
AAACGTCGTCGTTCTAACTC+TGG - chr4_1:81299360-81299379 Msa0577140:three_prime_UTR 45.0%
CTTCAAAGCACGAATTCGAG+TGG + chr4_1:81299400-81299419 None:intergenic 45.0%
CACTCGAATTCGTGCTTTGA+AGG - chr4_1:81299398-81299417 Msa0577140:three_prime_UTR 45.0%
! GGTAGCAATGGTTCTGTTAG+AGG - chr4_1:81299492-81299511 Msa0577140:three_prime_UTR 45.0%
AAATGGTGAACCACAGGTTG+AGG - chr4_1:81299665-81299684 Msa0577140:intron 45.0%
TACACACATACCTCAACCTG+TGG + chr4_1:81299678-81299697 None:intergenic 45.0%
!! GCAAGCACTGATATAGACAC+TGG + chr4_1:81299846-81299865 None:intergenic 45.0%
!!! GTCTTGTTTTTTGCAGGTGG+CGG - chr4_1:81299947-81299966 Msa0577140:intron 45.0%
GCTTGTGCTCCTTAACCATT+TGG - chr4_1:81300341-81300360 Msa0577140:intron 45.0%
GCTCCTTAACCATTTGGTCA+AGG - chr4_1:81300347-81300366 Msa0577140:intron 45.0%
AGAGGTTACCCTTGACCAAA+TGG + chr4_1:81300359-81300378 None:intergenic 45.0%
TAACCTCTGACCAATGCGTA+TGG - chr4_1:81300371-81300390 Msa0577140:intron 45.0%
! TTTCCATACGCATTGGTCAG+AGG + chr4_1:81300377-81300396 None:intergenic 45.0%
GAGCTGCGAGGTTCATTTAA+GGG + chr4_1:81300423-81300442 None:intergenic 45.0%
GACTAATTTATCGAGCTGCG+AGG + chr4_1:81300435-81300454 None:intergenic 45.0%
!! ATTTTCAGGAGGAATGACCG+AGG - chr4_1:81300625-81300644 Msa0577140:CDS 45.0%
AACCCTTGCCAAATGGCTTA+AGG - chr4_1:81300670-81300689 Msa0577140:CDS 45.0%
!! GGCTTAAGGAAAGCATTCTG+CGG - chr4_1:81300684-81300703 Msa0577140:CDS 45.0%
!! AAGGAAAGCATTCTGCGGTT+AGG - chr4_1:81300689-81300708 Msa0577140:intron 45.0%
CCACTCTTGTGGAGAATTGT+TGG + chr4_1:81300736-81300755 None:intergenic 45.0%
CCAACAATTCTCCACAAGAG+TGG - chr4_1:81300733-81300752 Msa0577140:intron 45.0%
AGGAAGAATGTCCACTCTTG+TGG + chr4_1:81300747-81300766 None:intergenic 45.0%
!!! GGAATGTGTGCCGTTTCTTT+TGG - chr4_1:81301103-81301122 Msa0577140:intron 45.0%
!! TTTTGGGTCAAGTAGCCTAG+TGG - chr4_1:81301120-81301139 Msa0577140:intron 45.0%
AGTGTGTCAGTCTAACCACT+AGG + chr4_1:81301138-81301157 None:intergenic 45.0%
AGACTGACACACTATGAGTG+TGG - chr4_1:81301145-81301164 Msa0577140:intron 45.0%
ACACTATGAGTGTGGAGAAG+TGG - chr4_1:81301153-81301172 Msa0577140:intron 45.0%
CACTATGAGTGTGGAGAAGT+GGG - chr4_1:81301154-81301173 Msa0577140:intron 45.0%
ACTATGAGTGTGGAGAAGTG+GGG - chr4_1:81301155-81301174 Msa0577140:intron 45.0%
TCCTTCTATAAGGTTGGGTG+GGG - chr4_1:81301399-81301418 Msa0577140:CDS 45.0%
! ATAGCAGTCTCTGAGGGAAA+TGG + chr4_1:81301678-81301697 None:intergenic 45.0%
ATTTCCCTCAGAGACTGCTA+TGG - chr4_1:81301677-81301696 Msa0577140:intron 45.0%
ATAGCCATAGCAGTCTCTGA+GGG + chr4_1:81301684-81301703 None:intergenic 45.0%
AATAGCCATAGCAGTCTCTG+AGG + chr4_1:81301685-81301704 None:intergenic 45.0%
GACTGCTATGGCTATTGTTG+AGG - chr4_1:81301689-81301708 Msa0577140:intron 45.0%
GCTATTGTTGAGGAAGAGCT+TGG - chr4_1:81301699-81301718 Msa0577140:intron 45.0%
AGGTTCATCGTGCGAGATTA+AGG - chr4_1:81301948-81301967 Msa0577140:intron 45.0%
GGTTCATCGTGCGAGATTAA+GGG - chr4_1:81301949-81301968 Msa0577140:intron 45.0%
GTTCATCGTGCGAGATTAAG+GGG - chr4_1:81301950-81301969 Msa0577140:intron 45.0%
CAAGTATAACACTGACCCTC+AGG + chr4_1:81302042-81302061 None:intergenic 45.0%
! GTCTTCTTTTCTCTCTCTCC+AGG - chr4_1:81302266-81302285 Msa0577140:intron 45.0%
AGATGGTGCAAAGAGGGATT+GGG - chr4_1:81302326-81302345 Msa0577140:intron 45.0%
CAGGTGAATGGAATGGCATA+TGG - chr4_1:81302533-81302552 Msa0577140:intron 45.0%
! TTTTCACAGAAGGGATACGG+TGG - chr4_1:81302696-81302715 Msa0577140:CDS 45.0%
CTTTAGCAATAGCTGCAGGT+TGG - chr4_1:81302917-81302936 Msa0577140:intron 45.0%
TTCGTTATCTTCCACAGGCT+AGG - chr4_1:81303475-81303494 Msa0577140:intron 45.0%
TCGTTATCTTCCACAGGCTA+GGG - chr4_1:81303476-81303495 Msa0577140:intron 45.0%
TTAGAGCAGATTCTCTCGCA+TGG - chr4_1:81303520-81303539 Msa0577140:intron 45.0%
AAGAACATACAGGATCGGCA+TGG + chr4_1:81303552-81303571 None:intergenic 45.0%
! CAAGCATCATTTGTTGCCCA+TGG - chr4_1:81303696-81303715 Msa0577140:intron 45.0%
!! TTCCCTTGGGGTTGATAACA+AGG - chr4_1:81303796-81303815 Msa0577140:intron 45.0%
! GTCCTTGTTATCAACCCCAA+GGG + chr4_1:81303801-81303820 None:intergenic 45.0%
! AGTCCTTGTTATCAACCCCA+AGG + chr4_1:81303802-81303821 None:intergenic 45.0%
! TCGATGATGTCAATGGTGGA+AGG - chr4_1:81303928-81303947 Msa0577140:CDS 45.0%
AAGACAATATGGGACCCATC+CGG + chr4_1:81304179-81304198 None:intergenic 45.0%
TGAAGCTTATGCACCTATGC+AGG - chr4_1:81304249-81304268 Msa0577140:intron 45.0%
ATTGCATCAAGGACCTGCAT+AGG + chr4_1:81304265-81304284 None:intergenic 45.0%
CAGCAGTCATATCTCCAGTT+GGG + chr4_1:81304309-81304328 None:intergenic 45.0%
ACAGCAGTCATATCTCCAGT+TGG + chr4_1:81304310-81304329 None:intergenic 45.0%
CAGCACAGTTCTTCCTCAAT+AGG - chr4_1:81304338-81304357 Msa0577140:CDS 45.0%
! TGGTCTTAAGAAGCCTGTGA+AGG + chr4_1:81304479-81304498 None:intergenic 45.0%
GATATTAGGGTTGGGTCTAC+CGG - chr4_1:81304622-81304641 Msa0577140:CDS 45.0%
!!! AGCTGCTAGTTTTCAAGGAC+AGG + chr4_1:81304760-81304779 None:intergenic 45.0%
AAAGAACGTCTGGCTGCTAT+TGG - chr4_1:81305080-81305099 Msa0577140:intron 45.0%
GGTACATACGCATGATTGGT+GGG + chr4_1:81305460-81305479 None:intergenic 45.0%
AGGTACATACGCATGATTGG+TGG + chr4_1:81305461-81305480 None:intergenic 45.0%
CCTAGGTACATACGCATGAT+TGG + chr4_1:81305464-81305483 None:intergenic 45.0%
CCAATCATGCGTATGTACCT+AGG - chr4_1:81305461-81305480 Msa0577140:intron 45.0%
GGGTCCATATGAGTATCATC+TGG - chr4_1:81305525-81305544 Msa0577140:intron 45.0%
TCCTGTGCAATTGTCTGTGT+TGG - chr4_1:81305617-81305636 Msa0577140:intron 45.0%
TCCAACACAGACAATTGCAC+AGG + chr4_1:81305621-81305640 None:intergenic 45.0%
!! TTGACTTGGAAGGCTTAGCA+AGG + chr4_1:81305801-81305820 None:intergenic 45.0%
AAGCCTTCCAAGTCAAAGAC+AGG - chr4_1:81305805-81305824 Msa0577140:intron 45.0%
AGCCTTCCAAGTCAAAGACA+GGG - chr4_1:81305806-81305825 Msa0577140:intron 45.0%
AAGTCACCCTGTCTTTGACT+TGG + chr4_1:81305815-81305834 None:intergenic 45.0%
GAGTTCCCCAAACCATGTTT+GGG - chr4_1:81305930-81305949 Msa0577140:CDS 45.0%
GCTATTGCCCAAACATGGTT+TGG + chr4_1:81305940-81305959 None:intergenic 45.0%
! TTGTCCAAACTCTAGGAGCT+TGG - chr4_1:81305976-81305995 Msa0577140:CDS 45.0%
! TGTCCAAACTCTAGGAGCTT+GGG - chr4_1:81305977-81305996 Msa0577140:CDS 45.0%
TAGGAGCTTGGGTTCTATCT+AGG - chr4_1:81305988-81306007 Msa0577140:CDS 45.0%
AGGAGCTTGGGTTCTATCTA+GGG - chr4_1:81305989-81306008 Msa0577140:CDS 45.0%
ATGTGAATGTGGCAGGAAAC+CGG + chr4_1:81306130-81306149 None:intergenic 45.0%
!!! TCTGCAGTTTTGGATGGCAT+TGG - chr4_1:81306247-81306266 Msa0577140:intron 45.0%
AGCATAACTACAAGGCTAGG+AGG + chr4_1:81306635-81306654 None:intergenic 45.0%
CAGAGCATAACTACAAGGCT+AGG + chr4_1:81306638-81306657 None:intergenic 45.0%
!! CTAGCCTTGTAGTTATGCTC+TGG - chr4_1:81306636-81306655 Msa0577140:intron 45.0%
TAACTTCAACTCCTGCCTCA+CGG + chr4_1:81306675-81306694 None:intergenic 45.0%
! TTCATTTTCCCACAGGAGCA+AGG - chr4_1:81306994-81307013 Msa0577140:CDS 45.0%
TTAGATCACCTTGCTCCTGT+GGG + chr4_1:81307005-81307024 None:intergenic 45.0%
TTTAGATCACCTTGCTCCTG+TGG + chr4_1:81307006-81307025 None:intergenic 45.0%
AAAGCTTAGAGTCCGAGCTT+TGG - chr4_1:81307023-81307042 Msa0577140:CDS 45.0%
CTCTCTCAGATTCCAAAGCT+CGG + chr4_1:81307038-81307057 None:intergenic 45.0%
TTGTGTGACCATGCTTGCAA+TGG - chr4_1:81307265-81307284 Msa0577140:intron 45.0%
AGTTGTTGCCATTGCAAGCA+TGG + chr4_1:81307276-81307295 None:intergenic 45.0%
TATTAACAGGCAGTAGGTGC+TGG - chr4_1:81307652-81307671 Msa0577140:CDS 45.0%
ATTAACAGGCAGTAGGTGCT+GGG - chr4_1:81307653-81307672 Msa0577140:CDS 45.0%
GAACGGGAACAACTGATTAC+AGG - chr4_1:81307911-81307930 Msa0577140:intron 45.0%
GGACTGCATAAGCAACTACT+AGG - chr4_1:81307933-81307952 Msa0577140:intron 45.0%
GGCTTCTGTTGAACATGTTG+AGG - chr4_1:81308090-81308109 Msa0577140:CDS 45.0%
CTTGGCTCATTGCAGATGAT+AGG - chr4_1:81308174-81308193 Msa0577140:CDS 45.0%
GCTCATTGCAGATGATAGGA+TGG - chr4_1:81308178-81308197 Msa0577140:CDS 45.0%
GCTCCTAATTGATGCTCTGA+AGG + chr4_1:81308241-81308260 None:intergenic 45.0%
GCCAAACATCTTGAGACATC+AGG - chr4_1:81308272-81308291 Msa0577140:CDS 45.0%
GGAAGTTGCAGTTATACTGG+AGG - chr4_1:81308314-81308333 Msa0577140:CDS 45.0%
CAAAAATGTGGCTCGCCAAT+TGG + chr4_1:81308390-81308409 None:intergenic 45.0%
!! GTAAGTGTTACTTGACCTGG+CGG + chr4_1:81308450-81308469 None:intergenic 45.0%
!!! TTATTTTTTTACATTATAAT+TGG - chr4_1:81299804-81299823 Msa0577140:CDS 5.0%
AACGAGTAACGACCACGCAA+CGG - chr4_1:81298971-81298990 Msa0577140:three_prime_UTR 50.0%
TATTGGTGCGGAGATTTCGC+GGG + chr4_1:81299033-81299052 None:intergenic 50.0%
! ATATGATGGTGACACGTGGC+AGG + chr4_1:81299091-81299110 None:intergenic 50.0%
ACTCACGCGCCATGAAAACT+AGG - chr4_1:81299227-81299246 Msa0577140:intron 50.0%
CTCACGCGCCATGAAAACTA+GGG - chr4_1:81299228-81299247 Msa0577140:intron 50.0%
GAGTGGTGAGCGATGTGAAA+TGG - chr4_1:81299445-81299464 Msa0577140:three_prime_UTR 50.0%
GTGAGCGATGTGAAATGGAG+TGG - chr4_1:81299450-81299469 Msa0577140:three_prime_UTR 50.0%
GGAAACGGCAGTGTTGTCAA+TGG - chr4_1:81299471-81299490 Msa0577140:three_prime_UTR 50.0%
TGTGAATGGCAATGGTGTGG+CGG - chr4_1:81299542-81299561 Msa0577140:intron 50.0%
CGAAAAGGAAGGAAGTTGGG+AGG - chr4_1:81299595-81299614 Msa0577140:intron 50.0%
AGGAAGTTGGGAGGAAGAAG+AGG - chr4_1:81299604-81299623 Msa0577140:intron 50.0%
AGTTGGGAGGAAGAAGAGGT+TGG - chr4_1:81299608-81299627 Msa0577140:intron 50.0%
TAGACACTGGACACGATACG+TGG + chr4_1:81299833-81299852 None:intergenic 50.0%
CTCGACGATCCAAAGAACGT+TGG - chr4_1:81300007-81300026 Msa0577140:CDS 50.0%
CGAGCTGCGAGGTTCATTTA+AGG + chr4_1:81300424-81300443 None:intergenic 50.0%
! GGCAAGGGTTTTTCGCCTTA+AGG + chr4_1:81300660-81300679 None:intergenic 50.0%
GGCGAAAAACCCTTGCCAAA+TGG - chr4_1:81300663-81300682 Msa0577140:CDS 50.0%
GGAATCCGGGATTTGAACTC+CGG - chr4_1:81301176-81301195 Msa0577140:intron 50.0%
GTTTGTAAGTGCAGCTCGGT+TGG + chr4_1:81301230-81301249 None:intergenic 50.0%
CCTTCTATAAGGTTGGGTGG+GGG - chr4_1:81301400-81301419 Msa0577140:CDS 50.0%
CCAAGACTTGCAGCAGCTAT+TGG + chr4_1:81301765-81301784 None:intergenic 50.0%
CCAATAGCTGCTGCAAGTCT+TGG - chr4_1:81301762-81301781 Msa0577140:intron 50.0%
! CTTTTTCCGCAATGCAGGTC+AGG - chr4_1:81301928-81301947 Msa0577140:intron 50.0%
GATGAACCTGACCTGCATTG+CGG + chr4_1:81301937-81301956 None:intergenic 50.0%
GGGACAGGAGGTTGTTATCA+AGG - chr4_1:81301970-81301989 Msa0577140:intron 50.0%
GTTATCAAGGTGCAAAGGCC+TGG - chr4_1:81301983-81302002 Msa0577140:intron 50.0%
CAGATGGTGCAAAGAGGGAT+TGG - chr4_1:81302325-81302344 Msa0577140:intron 50.0%
! AATAGCTGCAGGTTGGGAGT+GGG - chr4_1:81302924-81302943 Msa0577140:intron 50.0%
TTAAGGTTGAACCTGTGGGG+TGG + chr4_1:81303166-81303185 None:intergenic 50.0%
!! TAGATCAGCTGGGTGTTGAC+CGG - chr4_1:81303332-81303351 Msa0577140:intron 50.0%
ATGTTACCTCGGGAAGCTTC+TGG - chr4_1:81303757-81303776 Msa0577140:CDS 50.0%
ACTGGAACTCAGCTTCCCTT+GGG - chr4_1:81303783-81303802 Msa0577140:CDS 50.0%
TCCGATTAGACGCTTCCTGT+GGG - chr4_1:81303859-81303878 Msa0577140:intron 50.0%
!! ACCCACAGGAAGCGTCTAAT+CGG + chr4_1:81303863-81303882 None:intergenic 50.0%
ACATTGTCCATGCAGCATCC+TGG - chr4_1:81303894-81303913 Msa0577140:intron 50.0%
GCAGTCGATGATGTCAATGG+TGG - chr4_1:81303924-81303943 Msa0577140:CDS 50.0%
ATGGGAGTTCTTGTCCCAAC+TGG - chr4_1:81304292-81304311 Msa0577140:intron 50.0%
GAGATGGAAGCAGCTGAAGT+TGG - chr4_1:81305014-81305033 Msa0577140:intron 50.0%
! GTGTTTGGGCTACTGGCTAT+TGG - chr4_1:81305232-81305251 Msa0577140:intron 50.0%
! GGGGAGTTTAGTTCAGACCT+AGG + chr4_1:81305481-81305500 None:intergenic 50.0%
! CTCGGTATTCTGGAGAGACA+AGG + chr4_1:81305566-81305585 None:intergenic 50.0%
GTTGGAATAGACGTCGCTTC+AGG - chr4_1:81305635-81305654 Msa0577140:intron 50.0%
!! CACCCTGTCTTTGACTTGGA+AGG + chr4_1:81305811-81305830 None:intergenic 50.0%
GGAGTTCCCCAAACCATGTT+TGG - chr4_1:81305929-81305948 Msa0577140:CDS 50.0%
GGTCAGCTATTGCCCAAACA+TGG + chr4_1:81305945-81305964 None:intergenic 50.0%
GAACCCAAGCTCCTAGAGTT+TGG + chr4_1:81305983-81306002 None:intergenic 50.0%
AATGTGGCAGGAAACCGGAA+GGG + chr4_1:81306125-81306144 None:intergenic 50.0%
TTGCGTAGAACATGCACGGT+AGG + chr4_1:81306198-81306217 None:intergenic 50.0%
TGAAGACAGCACTCACGGTT+TGG + chr4_1:81306311-81306330 None:intergenic 50.0%
GCATGCAGCATGATCCTTTG+AGG - chr4_1:81306458-81306477 Msa0577140:intron 50.0%
GGAGTTGCTGAAATTCCGTG+AGG - chr4_1:81306657-81306676 Msa0577140:intron 50.0%
TTGCTGAAATTCCGTGAGGC+AGG - chr4_1:81306661-81306680 Msa0577140:intron 50.0%
GGCTGACAGGGTTGAAAAAC+TGG - chr4_1:81306850-81306869 Msa0577140:intron 50.0%
TCTGCACAGTTGCAATGCGT+TGG + chr4_1:81307065-81307084 None:intergenic 50.0%
GTGACCTTGCATGTGTGTGT+TGG - chr4_1:81307426-81307445 Msa0577140:intron 50.0%
AATCTGCTCCAACGACCTCC+AGG + chr4_1:81299978-81299997 None:intergenic 55.0%
GTGTGGAGAAGTGGGGAATC+CGG - chr4_1:81301162-81301181 Msa0577140:intron 55.0%
TGTGGAGAAGTGGGGAATCC+GGG - chr4_1:81301163-81301182 Msa0577140:intron 55.0%
GGACATTAGTATGCAGGGGC+CGG + chr4_1:81301198-81301217 None:intergenic 55.0%
!! CAGCTCGGTTGGTAGCTCAA+TGG + chr4_1:81301219-81301238 None:intergenic 55.0%
CCCCCACCCAACCTTATAGA+AGG + chr4_1:81301403-81301422 None:intergenic 55.0%
! GCAGTCTCTGAGGGAAATGG+AGG + chr4_1:81301675-81301694 None:intergenic 55.0%
TCGTGCGAGATTAAGGGGAC+AGG - chr4_1:81301955-81301974 Msa0577140:intron 55.0%
TGCGAGATTAAGGGGACAGG+AGG - chr4_1:81301958-81301977 Msa0577140:intron 55.0%
! CGGTGGCCTGCAATTTTACC+TGG - chr4_1:81302713-81302732 Msa0577140:CDS 55.0%
! CAATAGCTGCAGGTTGGGAG+TGG - chr4_1:81302923-81302942 Msa0577140:intron 55.0%
! ATAGCTGCAGGTTGGGAGTG+GGG - chr4_1:81302925-81302944 Msa0577140:intron 55.0%
CTGGGATTATACCACCCCAC+AGG - chr4_1:81303152-81303171 Msa0577140:intron 55.0%
!! AGCTGGGTGTTGACCGGAAA+AGG - chr4_1:81303338-81303357 Msa0577140:intron 55.0%
CAGCATATCTCCCTAGCCTG+TGG + chr4_1:81303489-81303508 None:intergenic 55.0%
CACTGGAACTCAGCTTCCCT+TGG - chr4_1:81303782-81303801 Msa0577140:CDS 55.0%
CTGGAACTCAGCTTCCCTTG+GGG - chr4_1:81303784-81303803 Msa0577140:CDS 55.0%
GTCCGATTAGACGCTTCCTG+TGG - chr4_1:81303858-81303877 Msa0577140:intron 55.0%
AAGAACGCCTGGCTGCACAA+AGG - chr4_1:81304982-81305001 Msa0577140:intron 55.0%
TCTCTCTCCTTTGTGCAGCC+AGG + chr4_1:81304992-81305011 None:intergenic 55.0%
GAATGTGGCAGGAAACCGGA+AGG + chr4_1:81306126-81306145 None:intergenic 55.0%
GCACGAGCACTAGCTCCTAT+GGG + chr4_1:81306520-81306539 None:intergenic 55.0%
TGCACGAGCACTAGCTCCTA+TGG + chr4_1:81306521-81306540 None:intergenic 55.0%
TGCTTAAAGGATCGGGTCCG+TGG - chr4_1:81308361-81308380 Msa0577140:CDS 55.0%
GCGTGGTCGTTACTCGTTCC+TGG + chr4_1:81298969-81298988 None:intergenic 60.0%
GAATGGCAATGGTGTGGCGG+CGG - chr4_1:81299545-81299564 Msa0577140:intron 60.0%
AGGGGCCGGAGTTCAAATCC+CGG + chr4_1:81301184-81301203 None:intergenic 60.0%
GAGCTTGGAGCTCCTATCGC+TGG - chr4_1:81301714-81301733 Msa0577140:intron 60.0%
GGTGCAAAGGCCTGGTCTCA+AGG - chr4_1:81301991-81302010 Msa0577140:intron 60.0%
CAGCATGCTGCTGGCACCAT+GGG + chr4_1:81303715-81303734 None:intergenic 60.0%
GGACACAAGCAGCATGCTGC+TGG + chr4_1:81303724-81303743 None:intergenic 60.0%
AGTGCTCCAGAAGCTTCCCG+AGG + chr4_1:81303766-81303785 None:intergenic 60.0%
!! TCGGGAAGCTTCTGGAGCAC+TGG - chr4_1:81303765-81303784 Msa0577140:CDS 60.0%
!! GAAGGGCTGGTCTGCTGCAA+TGG + chr4_1:81306108-81306127 None:intergenic 60.0%
TTGCAGCAGACCAGCCCTTC+CGG - chr4_1:81306108-81306127 Msa0577140:intron 60.0%
TCGGGTCCGTGGTAGCCAAT+TGG - chr4_1:81308372-81308391 Msa0577140:CDS 60.0%
GGCTCGCCAATTGGCTACCA+CGG + chr4_1:81308381-81308400 None:intergenic 60.0%
! TGCAGGTTGGGAGTGGGGTC+CGG - chr4_1:81302930-81302949 Msa0577140:intron 65.0%
GCAGCATGCTGCTGGCACCA+TGG + chr4_1:81303716-81303735 None:intergenic 65.0%
TGGCAGGAAACCGGAAGGGC+TGG + chr4_1:81306121-81306140 None:intergenic 65.0%
! TTGCAGGTGGCGGTTGCGCC+TGG - chr4_1:81299957-81299976 Msa0577140:intron 70.0%
CGGTTGCGCCTGGAGGTCGT+TGG - chr4_1:81299967-81299986 Msa0577140:intron 70.0%
! GCAGGTTGGGAGTGGGGTCC+GGG - chr4_1:81302931-81302950 Msa0577140:intron 70.0%
! CAGGTGGCGGTTGCGCCTGG+AGG - chr4_1:81299960-81299979 Msa0577140:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 81298959 81308753 81298959 ID=Msa0577140;Name=Msa0577140
chr4_1 mRNA 81298959 81308753 81298959 ID=Msa0577140-mRNA-1;Parent=Msa0577140;Name=Msa0577140-mRNA-1;_AED=0.15;_eAED=0.15;_QI=338|0.86|0.91|0.95|0.90|0.86|23|550|765
chr4_1 exon 81298959 81299226 81298959 ID=Msa0577140-mRNA-1:exon:29316;Parent=Msa0577140-mRNA-1
chr4_1 exon 81299253 81299523 81299253 ID=Msa0577140-mRNA-1:exon:29315;Parent=Msa0577140-mRNA-1
chr4_1 exon 81299758 81299885 81299758 ID=Msa0577140-mRNA-1:exon:29314;Parent=Msa0577140-mRNA-1
chr4_1 exon 81299992 81300051 81299992 ID=Msa0577140-mRNA-1:exon:29313;Parent=Msa0577140-mRNA-1
chr4_1 exon 81300614 81300703 81300614 ID=Msa0577140-mRNA-1:exon:29312;Parent=Msa0577140-mRNA-1
chr4_1 exon 81300820 81300918 81300820 ID=Msa0577140-mRNA-1:exon:29311;Parent=Msa0577140-mRNA-1
chr4_1 exon 81301010 81301064 81301010 ID=Msa0577140-mRNA-1:exon:29310;Parent=Msa0577140-mRNA-1
chr4_1 exon 81301398 81301458 81301398 ID=Msa0577140-mRNA-1:exon:29309;Parent=Msa0577140-mRNA-1
chr4_1 exon 81301542 81301622 81301542 ID=Msa0577140-mRNA-1:exon:29308;Parent=Msa0577140-mRNA-1
chr4_1 exon 81302611 81302735 81302611 ID=Msa0577140-mRNA-1:exon:29307;Parent=Msa0577140-mRNA-1
chr4_1 exon 81303353 81303441 81303353 ID=Msa0577140-mRNA-1:exon:29306;Parent=Msa0577140-mRNA-1
chr4_1 exon 81303555 81303624 81303555 ID=Msa0577140-mRNA-1:exon:29305;Parent=Msa0577140-mRNA-1
chr4_1 exon 81303730 81303803 81303730 ID=Msa0577140-mRNA-1:exon:29304;Parent=Msa0577140-mRNA-1
chr4_1 exon 81303907 81303987 81303907 ID=Msa0577140-mRNA-1:exon:29303;Parent=Msa0577140-mRNA-1
chr4_1 exon 81304151 81304220 81304151 ID=Msa0577140-mRNA-1:exon:29302;Parent=Msa0577140-mRNA-1
chr4_1 exon 81304332 81304432 81304332 ID=Msa0577140-mRNA-1:exon:29301;Parent=Msa0577140-mRNA-1
chr4_1 exon 81304539 81304649 81304539 ID=Msa0577140-mRNA-1:exon:29300;Parent=Msa0577140-mRNA-1
chr4_1 exon 81305326 81305424 81305326 ID=Msa0577140-mRNA-1:exon:29299;Parent=Msa0577140-mRNA-1
chr4_1 exon 81305667 81305767 81305667 ID=Msa0577140-mRNA-1:exon:29298;Parent=Msa0577140-mRNA-1
chr4_1 exon 81305929 81306049 81305929 ID=Msa0577140-mRNA-1:exon:29297;Parent=Msa0577140-mRNA-1
chr4_1 exon 81306913 81307079 81306913 ID=Msa0577140-mRNA-1:exon:29296;Parent=Msa0577140-mRNA-1
chr4_1 exon 81307614 81307749 81307614 ID=Msa0577140-mRNA-1:exon:29295;Parent=Msa0577140-mRNA-1
chr4_1 exon 81308026 81308753 81308026 ID=Msa0577140-mRNA-1:exon:29294;Parent=Msa0577140-mRNA-1
chr4_1 five_prime_UTR 81308416 81308753 81308416 ID=Msa0577140-mRNA-1:five_prime_utr;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81308026 81308415 81308026 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81307614 81307749 81307614 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81306913 81307079 81306913 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81305929 81306049 81305929 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81305667 81305767 81305667 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81305326 81305424 81305326 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81304539 81304649 81304539 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81304332 81304432 81304332 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81304151 81304220 81304151 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81303907 81303987 81303907 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81303730 81303803 81303730 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81303555 81303624 81303555 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81303353 81303441 81303353 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81302611 81302735 81302611 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81301542 81301622 81301542 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81301398 81301458 81301398 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81301010 81301064 81301010 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81300820 81300918 81300820 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81300614 81300703 81300614 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81299992 81300051 81299992 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 CDS 81299769 81299885 81299769 ID=Msa0577140-mRNA-1:cds;Parent=Msa0577140-mRNA-1
chr4_1 three_prime_UTR 81299758 81299768 81299758 ID=Msa0577140-mRNA-1:three_prime_utr;Parent=Msa0577140-mRNA-1
chr4_1 three_prime_UTR 81299253 81299523 81299253 ID=Msa0577140-mRNA-1:three_prime_utr;Parent=Msa0577140-mRNA-1
chr4_1 three_prime_UTR 81298959 81299226 81298959 ID=Msa0577140-mRNA-1:three_prime_utr;Parent=Msa0577140-mRNA-1
Gene Sequence

>Msa0577140

ATGGCTTCTTCATCTTCTCTACTCTTAACTGAACTCAATTTTCTTGCTCCTCAATTTACACCAAAACGTCGTCGTTCTAACTCTGGATTTTGCATTCTTCCCACTCGAATTCGTGCTTTGAAGGAAGAAGGTGCATTGGTTGAAGAAAGAGTGGTGAGCGATGTGAAATGGAGTGGAAACGGCAGTGTTGTCAATGGTAGCAATGGTTCTGTTAGAGGTTATGTGAATGGAAGCTTGGTGAAATATGTGAATGGCAATGGTGTGGCGGCGGAAGTTGTTGAAGATTTTGTGGAAACTTCGAAAAGGAAGGAAGTTGGGAGGAAGAAGAGGTTGGAAGAGATTGGAAAAGAAGATGCGTGGTTCAAACAAAATGGTGAACCACAGGTTGAGGTGGCGGTTGCGCCTGGAGGTCGTTGGAGCAGATTCAAGACTTACTCGACGATCCAAAGAACGTTGGAAATTTGGGGGTTTGTTATTCAATTCATCTTCAAGTCTTGGCTGAATCGTCAGAAGTTCTCTTATAAAGGAGGAATGACCGAGGAAAAGAAAACCTTAAGGCGAAAAACCCTTGCCAAATGGCTTAAGGAAAGCATTCTGCGGTTAGGTCCTACATTTATCAAAATTGGCCAACAATTCTCCACAAGAGTGGACATTCTTCCTCAAGAATATGTTGACCAATTGTCAGAACTTCAGGATCAAGTTCCTCCATTTCCCTCAGAGACTGCTATGGCTATTGTTGAGGAAGAGCTTGGAGCTCCTATCGCTGGCATATTTGATCAGTTTGACTATGAGCCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGTGCGAGATTAAGGGGACAGGAGGTTGTTATCAAGGTGCAAAGGCCTGGTCTCAAGGATCTTTTTGATATTGATCTTAAAAACCTGAGGGTTATTGCAGAATATCTTCAAAAAATTGATCCTAAATCAGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGACGAGTGTGCATCTGTTTTATATCAGGAGATTGATTACACTAAGGAGGCTGCTAATGCTGAACTGTTTGCAAGCAACTTTAAGAACATGGATTATGTGAAAGTCCCTTCAATTTACTGGGATTATACCACCCCACAGATTCTAACAATGGAGTATGTTCCAGGGATTAAAATAAACAAAATACAAGCTTTAGATCAGCTGGGTGTTGACCGGAAAAGGTTAATAGAATCTGGTTTACTGCTAGGGAGATATGCTGTTGAATCTTACTTAGAGCAGATTCTCTCGCATGGTTTCTTCCATGCCGATCCTCAGCATGCTGCTTGTGTCCTATTGATTATTATATGTTACCTCGGGAAGCTTCTGGAGCACTGGAACTCAGCTTCCCTTGGGCATCCTGGAAATATTGCAGTCGATGATGTCAATGGTGGAAGGTTGATCTTTTATGATTTTGGTATGATGGGAAGTATCAGTCAAAATATCAGAGAAGGTTTACTTGAAGCTTTTTATGGAGTTTATGAGAAGAGTCCAGACAAGGTCCTTGATGCAATGATTCAGATGGGAGTTCTTGTCCCAACTGGAGATATGACTGCTGTTAGACGAACAGCACAGTTCTTCCTCAATAGTTTTGAAGAACGCCTGGCTGCACAAAGGAGAGAGAAAGAGATGGAAGCAGCTGAAGTTGGATTCAAAAAGCCATTAAGCAAGGAAGAACAAGTAATGAAGAAGAAAGAACGTCTGGCTGCTATTGGCGAAGATTTGTTGTCCATTGCAGCAGACCAGCCCTTCCGGTTTCCTGCCACATTCACATTTGTTGTTAGAGCCTTCTCAGTTTTGGATGGCATTGGAAAGGGACTTGATCCCCGTTTTGATATTACTGAGATTGCCAAACCTTATGCTCTGGAGTTGCTGAAATTCCGTGAGGCAGGAGTTGAAGTTATCATAAAGGACATCAAAAAGAGATGGGACAGACAATCTCAAGCATTTTACAACTTATTTAGACAGGCTGACAGGGTTGAAAAACTGGCTAATGTTATTGAGCGTTTGGAGCAAGGTGATCTAAAGCTTAGAGTCCGAGCTTTGGAATCTGAGAGAGCATTCCAACGCATTGCAACTGTGCAGAAAACAATTGGGAATGCAGTAGGTGCTGGGAGCTTAATAAATCTTGCAACAATTTTGTCACTCAATTCAATTCGAGTTCCTGCCACTATAGCATATTTCTTTTGTGCGATCTTTGGTTTTCAAGTTCTCTTGGGCATTGTGAAGATCAAGAAGTTAGATGAACGGGAACAACTGATTACAGGGACTGCATAA
Protein sequence

>Msa0577140

MASSSSLLLTELNFLAPQFTPKRRRSNSGFCILPTRIRALKEEGALVEERVVSDVKWSGNGSVVNGSNGSVRGYVNGSLVKYVNGNGVAAEVVEDFVETSKRKEVGRKKRLEEIGKEDAWFKQNGEPQVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVIQFIFKSWLNRQKFSYKGGMTEEKKTLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAMAIVEEELGAPIAGIFDQFDYEPIAAASLGQVHRARLRGQEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMDYVKVPSIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLIESGLLLGRYAVESYLEQILSHGFFHADPQHAACVLLIIICYLGKLLEHWNSASLGHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEAFYGVYEKSPDKVLDAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREKEMEAAEVGFKKPLSKEEQVMKKKERLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDIKKRWDRQSQAFYNLFRQADRVEKLANVIERLEQGDLKLRVRALESERAFQRIATVQKTIGNAVGAGSLINLATILSLNSIRVPATIAYFFCAIFGFQVLLGIVKIKKLDEREQLITGTA*