AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1132320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132320 MtrunA17_Chr5g0395051 92.220 874 50 2 1 856 1 874 0.0 1645
Msa1132320 MtrunA17_Chr6g0468281 82.990 388 27 3 356 743 1 349 0.0 641
Msa1132320 MtrunA17_Chr6g0468301 91.250 160 11 1 1 157 1 160 2.46e-96 298
Msa1132320 MtrunA17_Chr6g0468291 95.918 98 4 0 224 321 1 98 3.95e-57 191
Msa1132320 MtrunA17_Chr1g0187091 35.315 286 141 9 91 362 207 462 1.48e-28 121
Msa1132320 MtrunA17_Chr1g0187091 49.038 104 44 2 9 103 1 104 9.29e-21 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132320 AT5G43630.2 30.700 671 346 24 31 619 25 658 1.14e-57 213
Msa1132320 AT5G43630.2 45.813 203 95 5 668 856 630 831 3.67e-42 166
Msa1132320 AT5G43630.4 30.700 671 346 24 31 619 25 658 1.14e-57 213
Msa1132320 AT5G43630.4 45.813 203 95 5 668 856 630 831 3.67e-42 166
Msa1132320 AT5G43630.3 30.700 671 346 24 31 619 25 658 1.14e-57 213
Msa1132320 AT5G43630.3 45.813 203 95 5 668 856 630 831 3.67e-42 166
Msa1132320 AT5G43630.1 30.700 671 346 24 31 619 25 658 1.14e-57 213
Msa1132320 AT5G43630.1 45.813 203 95 5 668 856 630 831 3.67e-42 166

Find 174 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACAAACAATTTGAGTTTA+TGG 0.087237 7_3:+85190723 Msa1132320:five_prime_UTR
TAGTAGCAATTTCACCTTTA+AGG 0.091636 7_3:+85194772 Msa1132320:three_prime_UTR
TCCTCAAAACCACTGGATTT+TGG 0.157505 7_3:-85193000 None:intergenic
GACTCCCTGGATTGTCTTTC+CGG 0.170908 7_3:-85192957 None:intergenic
TCCCCACTTATTCACCTTAA+AGG 0.181610 7_3:-85194786 None:intergenic
ATCTCTGGAAAACAGGTTAT+TGG 0.246005 7_3:-85192646 None:intergenic
AAATTTAAAGGTTCAATATT+AGG 0.247779 7_3:-85192748 None:intergenic
GAGCCTTTGTATTCAGTTAC+AGG 0.247973 7_3:-85191908 None:intergenic
TTCTTGTTTAATGTAGGATT+TGG 0.271583 7_3:-85192317 None:intergenic
AGATGAACCTAAACCTATTA+TGG 0.280334 7_3:+85191817 Msa1132320:CDS
AACCATGCATTATGAAGATT+TGG 0.280576 7_3:-85192433 None:intergenic
AGCAGTTGATCCTTGTTGTT+TGG 0.302468 7_3:+85190631 Msa1132320:five_prime_UTR
TGAACATATACTTCAACTTT+TGG 0.308816 7_3:-85193041 None:intergenic
ATCATAATTTATGCCTTCAT+TGG 0.310698 7_3:-85191867 None:intergenic
TTAGTTTGGTCTTCAGATAA+AGG 0.312924 7_3:+85191522 Msa1132320:CDS
AAACATTTAATGCACATAAA+AGG 0.319178 7_3:-85193312 None:intergenic
AAGAGTTCACTATCAGTCTT+TGG 0.323107 7_3:-85191393 None:intergenic
TGCGCCTGCGGCTTGGGAAG+TGG 0.328935 7_3:+85193931 Msa1132320:CDS
AAGTGAGCTAGAAGATCTTC+AGG 0.335373 7_3:+85193254 Msa1132320:CDS
TTTACTTGTGAGGTACATTC+TGG 0.345896 7_3:-85193168 None:intergenic
ATCCTCTTTCCGAATTAGTT+TGG 0.351970 7_3:+85191508 Msa1132320:CDS
CTTCTCTAAACTATGTTTCT+CGG 0.353124 7_3:-85194131 None:intergenic
TCATTGGGAGGCCTCCTTGA+TGG 0.355832 7_3:-85191851 None:intergenic
CTTGGCGTTTATAACGTCAT+TGG 0.358095 7_3:-85193532 None:intergenic
CCATGTACAGTGTTATTACT+TGG 0.358661 7_3:-85192610 None:intergenic
AAGAAAGCTCATTCAGAAAC+TGG 0.360229 7_3:+85192335 Msa1132320:CDS
ATTGAAAATGCCGTTTGTTA+AGG 0.362224 7_3:-85192675 None:intergenic
AACATTTCTTAAATCATTCT+CGG 0.363507 7_3:-85191996 None:intergenic
ATCTGAAGACCAAACTAATT+CGG 0.365396 7_3:-85191517 None:intergenic
TACCTCAAGAAAATCTTGAT+TGG 0.368233 7_3:-85194221 None:intergenic
TTCTTCATGACAAATCTTCA+TGG 0.368746 7_3:-85190658 None:intergenic
GAAGGCATAAATTATGATAC+TGG 0.375310 7_3:+85191872 Msa1132320:CDS
CCGGTCTTGCAGTCCCTTCA+TGG 0.379731 7_3:-85193413 None:intergenic
AGGTGAATAAGTGGGGAATC+CGG 0.381843 7_3:+85194792 Msa1132320:three_prime_UTR
TTCAAACTTGTGCCTTAGTA+AGG 0.384377 7_3:+85192822 Msa1132320:CDS
AAGACAATCCAGGGAGTCTA+TGG 0.386401 7_3:+85192962 Msa1132320:CDS
CGGCTTGGGAAGTGGGAAGA+AGG 0.393299 7_3:+85193939 Msa1132320:CDS
ATCGACAATGAAGAAACTTC+TGG 0.405788 7_3:+85192292 Msa1132320:CDS
TATCCAAGTTTGAAGAATAT+AGG 0.406340 7_3:+85192541 Msa1132320:CDS
GCAATTGATCTCTGGAAAAC+AGG 0.406472 7_3:-85192653 None:intergenic
TCTCAACAGCAGTTGATGAT+TGG 0.410588 7_3:+85192253 Msa1132320:CDS
ATTCTCTGCTTTCTTTCTCT+CGG 0.414942 7_3:-85192926 None:intergenic
ATTTGCATCCCCATCTGATA+AGG 0.416235 7_3:-85192140 None:intergenic
GGTGAATAAGTGGGGAATCC+GGG 0.418329 7_3:+85194793 Msa1132320:three_prime_UTR
ATAATATATACATGCACAAC+TGG 0.419783 7_3:+85195009 Msa1132320:three_prime_UTR
GCGCCTGCGGCTTGGGAAGT+GGG 0.434123 7_3:+85193932 Msa1132320:CDS
TATAACATCTCCGTCGAGAT+TGG 0.435268 7_3:+85193629 Msa1132320:CDS
CTCAACAGCAGTTGATGATT+GGG 0.436500 7_3:+85192254 Msa1132320:CDS
TTGTTAAGGCAATTGATCTC+TGG 0.437536 7_3:-85192661 None:intergenic
CTTTCTCTCGGATGGTGCGT+TGG 0.438518 7_3:-85192914 None:intergenic
TAGTAAGGACAAGGAAGAAA+TGG 0.439540 7_3:+85192837 Msa1132320:CDS
TCTGCTTTCTTTCTCTCGGA+TGG 0.440615 7_3:-85192922 None:intergenic
CTCGACGGAGATGTTATACT+AGG 0.443437 7_3:-85193624 None:intergenic
GAAGAAGGGCTTGGAGGAAC+TGG 0.447576 7_3:+85193954 Msa1132320:CDS
TACAAAGGCTCTGGTGCTGC+AGG 0.449475 7_3:+85191920 Msa1132320:CDS
CTCATCTTCCTCAAAACCAC+TGG 0.450177 7_3:-85193007 None:intergenic
AACGACACTACCTTGCGTTA+AGG 0.450935 7_3:+85192048 Msa1132320:CDS
AATCTCTCTCAGTGAAAGTA+GGG 0.456729 7_3:+85194164 Msa1132320:CDS
TGTAAATTCATATGAAGGTC+CGG 0.457030 7_3:+85193281 Msa1132320:CDS
TGATGCATTGCATTCTATCT+TGG 0.457149 7_3:-85193550 None:intergenic
TCATAATTTATGCCTTCATT+GGG 0.458322 7_3:-85191866 None:intergenic
GTTCCTATATTCTTCAAACT+TGG 0.462575 7_3:-85192544 None:intergenic
TTACATGGAGAATGCAAAAC+AGG 0.463584 7_3:-85192076 None:intergenic
TGAGCTTTCTTGTTTAATGT+AGG 0.464135 7_3:-85192323 None:intergenic
AAATCTCTCTCAGTGAAAGT+AGG 0.468291 7_3:+85194163 Msa1132320:CDS
TTTCTTCCTTGTCCTTACTA+AGG 0.468637 7_3:-85192834 None:intergenic
CTTCCCACTTCCCAAGCCGC+AGG 0.470117 7_3:-85193935 None:intergenic
ACGTTTGCAAGGAGATTTGT+TGG 0.471483 7_3:+85193117 Msa1132320:CDS
TTTATCAGCAAAGCTTGAAT+CGG 0.474036 7_3:-85191562 None:intergenic
TGATGCTGAAAACAAATATG+AGG 0.475122 7_3:+85192018 Msa1132320:CDS
ATTCACAAACTCGGAGCAAA+TGG 0.479748 7_3:+85193089 Msa1132320:CDS
GGGAAGTGGGAAGAAGGGCT+TGG 0.479926 7_3:+85193945 Msa1132320:CDS
CTTCAAACTTGGATAATACA+TGG 0.480740 7_3:-85192533 None:intergenic
CCAAGTAATAACACTGTACA+TGG 0.482380 7_3:+85192610 Msa1132320:CDS
GATATCAGATCTTCTTCAGA+TGG 0.485772 7_3:-85194693 None:intergenic
CGAGTTATCCATAGACTCCC+TGG 0.491615 7_3:-85192970 None:intergenic
TCAAGGAGGCCTCCCAATGA+AGG 0.494185 7_3:+85191854 Msa1132320:CDS
TTGAAAGCTGTAACAGTGCT+AGG 0.495098 7_3:+85192200 Msa1132320:CDS
TGAATTGCTGTCATTATCCA+TGG 0.498749 7_3:-85192173 None:intergenic
CTTCTCCACTCATCTTCAGA+AGG 0.500514 7_3:-85191353 None:intergenic
GTACATTCTGGTTTGTCTGT+CGG 0.500733 7_3:-85193156 None:intergenic
CCATGAAGGGACTGCAAGAC+CGG 0.501023 7_3:+85193413 Msa1132320:CDS
TCACCTTTAAGGTGAATAAG+TGG 0.501710 7_3:+85194783 Msa1132320:three_prime_UTR
TATGAAGATTTGGATTTGCA+AGG 0.503391 7_3:-85192423 None:intergenic
GAAAATGTAAATTCATATGA+AGG 0.504472 7_3:+85193276 Msa1132320:CDS
ATCCAAATCTTCATAATGCA+TGG 0.507310 7_3:+85192431 Msa1132320:CDS
TTACTTCAGGATGTCGGTGC+GGG 0.508749 7_3:-85193715 None:intergenic
GTCAAAACCTTTGTCCATGA+AGG 0.509754 7_3:+85193399 Msa1132320:CDS
CACCTTTAAGGTGAATAAGT+GGG 0.509973 7_3:+85194784 Msa1132320:three_prime_UTR
AACACTTGGTAAAAGACTAA+AGG 0.513176 7_3:-85194887 None:intergenic
TCTGCCTTGTCAATCTGCAC+CGG 0.520768 7_3:-85193432 None:intergenic
GGATTTCAAGCATGGTGAAA+GGG 0.521068 7_3:+85192356 Msa1132320:CDS
GTAACTGAATACAAAGGCTC+TGG 0.523768 7_3:+85191911 Msa1132320:CDS
GGCTTGGGAAGTGGGAAGAA+GGG 0.526914 7_3:+85193940 Msa1132320:CDS
CTCAACACCTGCTTCTGAGT+TGG 0.528426 7_3:-85194667 None:intergenic
CTGTCGGCATGATATGTTTG+AGG 0.529117 7_3:-85193140 None:intergenic
TGCAAATGTAAGATTATCCA+TGG 0.529365 7_3:+85192156 Msa1132320:CDS
GACCAAACTAATTCGGAAAG+AGG 0.530007 7_3:-85191510 None:intergenic
TTCTATAGGATTCCTGCTGG+AGG 0.530141 7_3:-85191957 None:intergenic
CTGCAGATCAGGTTGATCAA+AGG 0.530764 7_3:+85191768 Msa1132320:intron
TGCAGTCCCTTCATGGACAA+AGG 0.530820 7_3:-85193406 None:intergenic
CAGAAACTGGATTTCAAGCA+TGG 0.531557 7_3:+85192348 Msa1132320:CDS
AGCAGATGGGTAACTGCTCA+TGG 0.531563 7_3:+85193879 Msa1132320:intron
ATAACGCTGACCAGTGCGAT+TGG 0.531960 7_3:+85191421 Msa1132320:CDS
ACAAGAATGTTTCATCAAGA+AGG 0.536595 7_3:+85192565 Msa1132320:CDS
TGCCATGAGCATAGCTCAGT+TGG 0.537102 7_3:-85194858 None:intergenic
AGATCAATTGCCTTAACAAA+CGG 0.537737 7_3:+85192665 Msa1132320:CDS
TTAAAGGTGAAATTGCTACT+AGG 0.537925 7_3:-85194770 None:intergenic
TAATATTTCAGGAACATTCG+TGG 0.538468 7_3:+85191320 Msa1132320:intron
AAGGAAAAGTCCTTATCAGA+TGG 0.541772 7_3:+85192130 Msa1132320:CDS
TGGATTTCAAGCATGGTGAA+AGG 0.544832 7_3:+85192355 Msa1132320:CDS
AAGTGGGAAGAAGGGCTTGG+AGG 0.545767 7_3:+85193948 Msa1132320:CDS
CTAATTTAACATCCTCCAGC+AGG 0.545874 7_3:+85191945 Msa1132320:CDS
CATTACTTACTTCAGGATGT+CGG 0.547841 7_3:-85193721 None:intergenic
TAGTACCGCCAGATAAAATC+CGG 0.549876 7_3:-85193455 None:intergenic
ATCAGAATATTAATTTAAAG+CGG 0.551454 7_3:+85193505 Msa1132320:CDS
ACAAAACATGTTTACTTGTG+AGG 0.552330 7_3:-85193178 None:intergenic
TGGAGCAAAATTCTCCATCA+AGG 0.553513 7_3:+85191837 Msa1132320:CDS
AGTCACCGGAAAGACAATCC+AGG 0.553846 7_3:+85192952 Msa1132320:CDS
GTGGCTTGTATAACTATAAG+TGG 0.554774 7_3:+85193984 Msa1132320:CDS
AGGAAAAGTCCTTATCAGAT+GGG 0.555535 7_3:+85192131 Msa1132320:CDS
TGCAGATTGACAAGGCAGAC+CGG 0.555594 7_3:+85193436 Msa1132320:CDS
TAATTTATGCCTTCATTGGG+AGG 0.557620 7_3:-85191863 None:intergenic
TGAGCATAGCTCAGTTGGTA+GGG 0.557784 7_3:-85194853 None:intergenic
CAGCTGAGCAATCACTGAGT+TGG 0.558671 7_3:-85193224 None:intergenic
TGGATCATTCTCGCAACTCG+AGG 0.560436 7_3:+85193899 Msa1132320:CDS
TGAAGTAATAAATCATCAGT+TGG 0.560508 7_3:-85191791 None:intergenic
ACCTTTAAGGTGAATAAGTG+GGG 0.561200 7_3:+85194785 Msa1132320:three_prime_UTR
TGGTCTGCCAACTCAGAAGC+AGG 0.561703 7_3:+85194660 Msa1132320:CDS
TCTGGCGGTACTATCCATGA+TGG 0.562268 7_3:+85193465 Msa1132320:CDS
ACATGTCATGGTTTGAACCC+CGG 0.563136 7_3:-85194811 None:intergenic
GTGAATAAGTGGGGAATCCG+GGG 0.566584 7_3:+85194794 Msa1132320:three_prime_UTR
AAATGGCTTCGACGTTTGCA+AGG 0.568653 7_3:+85193106 Msa1132320:CDS
CGATTTGCTCCAAAATCCAG+TGG 0.570951 7_3:+85192991 Msa1132320:CDS
ATATTGTGGTTCTAGTTCAA+AGG 0.571071 7_3:+85193581 Msa1132320:CDS
AAGCAGAGAATATCAGTCAC+CGG 0.581238 7_3:+85192938 Msa1132320:CDS
ATTATCTACGACACATGTCA+TGG 0.585144 7_3:-85194823 None:intergenic
TTACATTGATTATAGCAGCT+AGG 0.585790 7_3:-85191612 None:intergenic
GCATCATGCAAGAAATATTG+TGG 0.587668 7_3:+85193567 Msa1132320:CDS
ATGAGCATAGCTCAGTTGGT+AGG 0.592011 7_3:-85194854 None:intergenic
CTTGTGCCTTAGTAAGGACA+AGG 0.597028 7_3:+85192828 Msa1132320:CDS
TCAAAACCTTTGTCCATGAA+GGG 0.597057 7_3:+85193400 Msa1132320:CDS
GGATCATTCTCGCAACTCGA+GGG 0.597301 7_3:+85193900 Msa1132320:CDS
GGTTCAATATTAGGCTGTGA+CGG 0.600004 7_3:-85192739 None:intergenic
TAAATAAACATATTAACACT+TGG 0.607007 7_3:-85194901 None:intergenic
GTTATGCCGCTTCTTACCTG+TGG 0.607094 7_3:-85192230 None:intergenic
TACAGGAAGAAATCATGGAA+TGG 0.611613 7_3:+85194637 Msa1132320:intron
TACCAACTGAGCTATGCTCA+TGG 0.617163 7_3:+85194856 Msa1132320:three_prime_UTR
ATGTTTCATCAAGAAGGAGA+AGG 0.623506 7_3:+85192571 Msa1132320:CDS
ACAGGAAGAACCTTAACGCA+AGG 0.624154 7_3:-85192058 None:intergenic
GAAGATTTCACATGTGCCAG+AGG 0.625270 7_3:+85193659 Msa1132320:CDS
AGGAAGAAATCATGGAATGG+TGG 0.625917 7_3:+85194640 Msa1132320:intron
TAATTCGGAAAGAGGATCAG+TGG 0.635047 7_3:-85191502 None:intergenic
GATGCTGAAAACAAATATGA+GGG 0.635203 7_3:+85192019 Msa1132320:CDS
GTCACCGGAAAGACAATCCA+GGG 0.636256 7_3:+85192953 Msa1132320:CDS
ATCTCTCTCAGTGAAAGTAG+GGG 0.638733 7_3:+85194165 Msa1132320:CDS
ATCCTCGCGAAGATGATGAA+AGG 0.640734 7_3:-85193068 None:intergenic
TTTGTCCTTCTGAAGATGAG+TGG 0.640790 7_3:+85191348 Msa1132320:exon
GACCTTTCATCATCTTCGCG+AGG 0.641559 7_3:+85193066 Msa1132320:CDS
AAGATTTCACATGTGCCAGA+GGG 0.642256 7_3:+85193660 Msa1132320:CDS
TTCGCGAGGATTCACAAACT+CGG 0.642339 7_3:+85193080 Msa1132320:CDS
TCTCTCTCAGTGAAAGTAGG+GGG 0.646665 7_3:+85194166 Msa1132320:CDS
ATGTAACAGCAAAATCCGCA+TGG 0.652139 7_3:+85192093 Msa1132320:CDS
TGGAGGAACTGGTTACCATG+TGG 0.653299 7_3:+85193965 Msa1132320:CDS
GGAAAAGTCCTTATCAGATG+GGG 0.656916 7_3:+85192132 Msa1132320:CDS
CTTACTTCAGGATGTCGGTG+CGG 0.670580 7_3:-85193716 None:intergenic
AAGACCGGTGCAGATTGACA+AGG 0.674989 7_3:+85193428 Msa1132320:CDS
TCATGGTAATCCAAACAACA+AGG 0.679129 7_3:-85190641 None:intergenic
TCAAGAAGGAGAAGGTGACG+AGG 0.679529 7_3:+85192579 Msa1132320:CDS
GAGCCTGTAACTGAATACAA+AGG 0.702420 7_3:+85191905 Msa1132320:CDS
GCTTCAGAGAGATATGACGC+TGG 0.707407 7_3:+85192715 Msa1132320:CDS
AGCAAAATTCTCCATCAAGG+AGG 0.713594 7_3:+85191840 Msa1132320:CDS
TTATAGTTATACAAGCCACA+TGG 0.755776 7_3:-85193980 None:intergenic
TGGAACATGAAACTGCCCAG+TGG 0.805275 7_3:-85193344 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATGTTAATAAAAGT+AGG - chr7_3:85190511-85190530 None:intergenic 10.0%
!! ATATATAAATGTAAATGTAA+AGG - chr7_3:85191187-85191206 None:intergenic 10.0%
!!! AAGTATTTAACTTCTATAAA+GGG - chr7_3:85190990-85191009 None:intergenic 15.0%
!!! TCAGAATTATTTTCATTTTA+AGG + chr7_3:85191268-85191287 Msa1132320:intron 15.0%
!! AAATTTAAAGGTTCAATATT+AGG - chr7_3:85192751-85192770 None:intergenic 15.0%
!! ATCAGAATATTAATTTAAAG+CGG + chr7_3:85193505-85193524 Msa1132320:CDS 15.0%
!!! TTTTAAACTTTTTCTTATTC+TGG + chr7_3:85194095-85194114 Msa1132320:intron 15.0%
!! AATCATCAATGATTATTTAT+TGG + chr7_3:85194250-85194269 Msa1132320:intron 15.0%
!! TAAATAAACATATTAACACT+TGG - chr7_3:85194904-85194923 None:intergenic 15.0%
!! TCTTATCTAAACAAAACATA+AGG - chr7_3:85190393-85190412 None:intergenic 20.0%
!! ATCTAATAAGATTAAAGTTG+TGG - chr7_3:85190447-85190466 None:intergenic 20.0%
!!! TAACAAACAATTTGAGTTTA+TGG + chr7_3:85190723-85190742 Msa1132320:five_prime_UTR 20.0%
!!! TTATTTCACAAAAGCATTAT+AGG - chr7_3:85190821-85190840 None:intergenic 20.0%
!!! CAAGTATTTAACTTCTATAA+AGG - chr7_3:85190991-85191010 None:intergenic 20.0%
!! CATAATTCAATCAAGTAATT+CGG + chr7_3:85191129-85191148 Msa1132320:intron 20.0%
!!! TTTGATTCGAATAATATTTC+AGG + chr7_3:85191309-85191328 Msa1132320:intron 20.0%
!! AATCAATGTAAGAAACATAT+AGG + chr7_3:85191624-85191643 Msa1132320:intron 20.0%
!! AACATTTCTTAAATCATTCT+CGG - chr7_3:85191999-85192018 None:intergenic 20.0%
!! TGGCTGTTATAAAAATTTAA+AGG - chr7_3:85192763-85192782 None:intergenic 20.0%
!!! TTTAAATTTTTATAACAGCC+AGG + chr7_3:85192762-85192781 Msa1132320:CDS 20.0%
!! GAAAATGTAAATTCATATGA+AGG + chr7_3:85193276-85193295 Msa1132320:CDS 20.0%
!! AAACATTTAATGCACATAAA+AGG - chr7_3:85193315-85193334 None:intergenic 20.0%
!!! TTTTATTTTTGAGATTGAAC+TGG - chr7_3:85193367-85193386 None:intergenic 20.0%
!! CTTTATAATACAAAATGTCA+CGG - chr7_3:85193765-85193784 None:intergenic 20.0%
!!! TTCAGCTCTAATAAATTTTA+TGG + chr7_3:85194456-85194475 Msa1132320:intron 20.0%
!!! TCTAATAAATTTTATGGAGT+GGG + chr7_3:85194462-85194481 Msa1132320:intron 20.0%
!!! TTATTACAATCAACATGTTT+TGG + chr7_3:85194579-85194598 Msa1132320:intron 20.0%
!! TTGACAAAAAAAAAGGTTAA+AGG - chr7_3:85194746-85194765 None:intergenic 20.0%
! ATAAGAAAAAAGAGAAACTG+AGG - chr7_3:85190242-85190261 None:intergenic 25.0%
!! TTCTTAGCTAGCTTATTTAT+TGG + chr7_3:85190344-85190363 Msa1132320:intron 25.0%
! AAAACATAATAGTAAGCTAG+TGG - chr7_3:85190553-85190572 None:intergenic 25.0%
!! TAGCTTACTATTATGTTTTG+TGG + chr7_3:85190554-85190573 Msa1132320:intron 25.0%
! TCTTACTATGAATAATGTCA+AGG - chr7_3:85190763-85190782 None:intergenic 25.0%
! TTCTATAGCTTTCTTAAAGT+TGG - chr7_3:85190849-85190868 None:intergenic 25.0%
! GTTAGAATAATGGTTTATTG+AGG + chr7_3:85191034-85191053 Msa1132320:intron 25.0%
! ATAATGGTTTATTGAGGAAA+AGG + chr7_3:85191040-85191059 Msa1132320:intron 25.0%
!!! TTCTAGCTTAATGTTACTTA+AGG + chr7_3:85191152-85191171 Msa1132320:intron 25.0%
! ATGAAAATAATTCTGAATGC+AGG - chr7_3:85191264-85191283 None:intergenic 25.0%
! TGAAGTAATAAATCATCAGT+TGG - chr7_3:85191794-85191813 None:intergenic 25.0%
! TCATAATTTATGCCTTCATT+GGG - chr7_3:85191869-85191888 None:intergenic 25.0%
! ATCATAATTTATGCCTTCAT+TGG - chr7_3:85191870-85191889 None:intergenic 25.0%
!! TTCTTGTTTAATGTAGGATT+TGG - chr7_3:85192320-85192339 None:intergenic 25.0%
!! GATTTGAATCCTGTATTTTT+CGG - chr7_3:85192502-85192521 None:intergenic 25.0%
!! ATAATACATGGACTGAAAAA+TGG - chr7_3:85192524-85192543 None:intergenic 25.0%
! TATCCAAGTTTGAAGAATAT+AGG + chr7_3:85192541-85192560 Msa1132320:CDS 25.0%
!! TGAACATATACTTCAACTTT+TGG - chr7_3:85193044-85193063 None:intergenic 25.0%
!!! AACATGTTTTGTTTGTTTTG+TGG + chr7_3:85193189-85193208 Msa1132320:CDS 25.0%
!! CACATAAAAGGAAAATTTTC+CGG - chr7_3:85193303-85193322 None:intergenic 25.0%
! CTCAAAAATAAAACCTGAAT+CGG + chr7_3:85193374-85193393 Msa1132320:CDS 25.0%
! TCTATTGCTCAATTACATTA+AGG + chr7_3:85193794-85193813 Msa1132320:intron 25.0%
!!! ATACCTGGTTCATTTTTTTT+TGG + chr7_3:85194046-85194065 Msa1132320:intron 25.0%
! TATCCAAAAAAAAATGAACC+AGG - chr7_3:85194052-85194071 None:intergenic 25.0%
! GATATAGCTTCAATAACAAT+AGG - chr7_3:85194395-85194414 None:intergenic 25.0%
! TATATCGTTTCAATGTCATT+TGG + chr7_3:85194409-85194428 Msa1132320:intron 25.0%
!! CTCTAATAAATTTTATGGAG+TGG + chr7_3:85194461-85194480 Msa1132320:intron 25.0%
! TTCAAAAAGAAACAAATGCT+AGG + chr7_3:85194720-85194739 Msa1132320:CDS 25.0%
! ATAATATATACATGCACAAC+TGG + chr7_3:85195009-85195028 Msa1132320:three_prime_UTR 25.0%
! TCACAAGATTCATTGTTTTC+TGG + chr7_3:85190284-85190303 Msa1132320:five_prime_UTR 30.0%
! TTTTCTGGATCAAACATAAC+TGG + chr7_3:85190299-85190318 Msa1132320:five_prime_UTR 30.0%
!! TATTGGTTTCTTCACTTTCA+AGG + chr7_3:85190361-85190380 Msa1132320:intron 30.0%
AAGTTGTGGATAAGATAAAG+TGG - chr7_3:85190433-85190452 None:intergenic 30.0%
TTCTTCATGACAAATCTTCA+TGG - chr7_3:85190661-85190680 None:intergenic 30.0%
!! TCACAAAAGCATTATAGGTT+AGG - chr7_3:85190816-85190835 None:intergenic 30.0%
! AAGGGCTAAGTCTATATTTT+TGG - chr7_3:85190962-85190981 None:intergenic 30.0%
!!! CTTCTATAAAGGGTTTTGAA+GGG - chr7_3:85190980-85190999 None:intergenic 30.0%
!! ACTTCTATAAAGGGTTTTGA+AGG - chr7_3:85190981-85191000 None:intergenic 30.0%
GCATAGAGAAGTTAGAATAA+TGG + chr7_3:85191024-85191043 Msa1132320:intron 30.0%
!! TTTCTGAAATGCACCTTATT+AGG - chr7_3:85191091-85191110 None:intergenic 30.0%
TAATATTTCAGGAACATTCG+TGG + chr7_3:85191320-85191339 Msa1132320:intron 30.0%
ATCTGAAGACCAAACTAATT+CGG - chr7_3:85191520-85191539 None:intergenic 30.0%
! TTAGTTTGGTCTTCAGATAA+AGG + chr7_3:85191522-85191541 Msa1132320:CDS 30.0%
TTTATCAGCAAAGCTTGAAT+CGG - chr7_3:85191565-85191584 None:intergenic 30.0%
! TTACATTGATTATAGCAGCT+AGG - chr7_3:85191615-85191634 None:intergenic 30.0%
AGATGAACCTAAACCTATTA+TGG + chr7_3:85191817-85191836 Msa1132320:CDS 30.0%
! TTTTGCTCCATAATAGGTTT+AGG - chr7_3:85191827-85191846 None:intergenic 30.0%
! GAAGGCATAAATTATGATAC+TGG + chr7_3:85191872-85191891 Msa1132320:CDS 30.0%
! CTAGATTCCAGTTTTTCTAT+AGG - chr7_3:85191974-85191993 None:intergenic 30.0%
TGATGCTGAAAACAAATATG+AGG + chr7_3:85192018-85192037 Msa1132320:CDS 30.0%
GATGCTGAAAACAAATATGA+GGG + chr7_3:85192019-85192038 Msa1132320:CDS 30.0%
TGCAAATGTAAGATTATCCA+TGG + chr7_3:85192156-85192175 Msa1132320:CDS 30.0%
! TGAGCTTTCTTGTTTAATGT+AGG - chr7_3:85192326-85192345 None:intergenic 30.0%
TATGAAGATTTGGATTTGCA+AGG - chr7_3:85192426-85192445 None:intergenic 30.0%
ATCCAAATCTTCATAATGCA+TGG + chr7_3:85192431-85192450 Msa1132320:CDS 30.0%
AACCATGCATTATGAAGATT+TGG - chr7_3:85192436-85192455 None:intergenic 30.0%
CTTCAAACTTGGATAATACA+TGG - chr7_3:85192536-85192555 None:intergenic 30.0%
GTTCCTATATTCTTCAAACT+TGG - chr7_3:85192547-85192566 None:intergenic 30.0%
ACAAGAATGTTTCATCAAGA+AGG + chr7_3:85192565-85192584 Msa1132320:CDS 30.0%
AGATCAATTGCCTTAACAAA+CGG + chr7_3:85192665-85192684 Msa1132320:CDS 30.0%
! ATTGAAAATGCCGTTTGTTA+AGG - chr7_3:85192678-85192697 None:intergenic 30.0%
! GGTTAATTTTGCTTATTTCC+TGG - chr7_3:85192783-85192802 None:intergenic 30.0%
! AACAATTTTCATTCTCTGCT+GGG - chr7_3:85192804-85192823 None:intergenic 30.0%
ACAAAACATGTTTACTTGTG+AGG - chr7_3:85193181-85193200 None:intergenic 30.0%
!!! TGTTTGTTTTGTGGAAAAAG+AGG + chr7_3:85193198-85193217 Msa1132320:CDS 30.0%
TGTAAATTCATATGAAGGTC+CGG + chr7_3:85193281-85193300 Msa1132320:CDS 30.0%
! TATTCTGATCTGTTTTGTGA+TGG - chr7_3:85193494-85193513 None:intergenic 30.0%
!! ATATTGTGGTTCTAGTTCAA+AGG + chr7_3:85193581-85193600 Msa1132320:CDS 30.0%
TTATAGTTATACAAGCCACA+TGG - chr7_3:85193983-85194002 None:intergenic 30.0%
CTTCTCTAAACTATGTTTCT+CGG - chr7_3:85194134-85194153 None:intergenic 30.0%
! ATCCAATCAAGATTTTCTTG+AGG + chr7_3:85194219-85194238 Msa1132320:CDS 30.0%
TACCTCAAGAAAATCTTGAT+TGG - chr7_3:85194224-85194243 None:intergenic 30.0%
CTGAATTTCACATGAGTTTA+TGG - chr7_3:85194441-85194460 None:intergenic 30.0%
TGATTTCTTCCTGTACAAAA+GGG - chr7_3:85194632-85194651 None:intergenic 30.0%
ATGATTTCTTCCTGTACAAA+AGG - chr7_3:85194633-85194652 None:intergenic 30.0%
! TTTTGTACAGGAAGAAATCA+TGG + chr7_3:85194632-85194651 Msa1132320:intron 30.0%
AGGCTACTTGACAAAAAAAA+AGG - chr7_3:85194753-85194772 None:intergenic 30.0%
TTAAAGGTGAAATTGCTACT+AGG - chr7_3:85194773-85194792 None:intergenic 30.0%
TAGTAGCAATTTCACCTTTA+AGG + chr7_3:85194772-85194791 Msa1132320:three_prime_UTR 30.0%
AACACTTGGTAAAAGACTAA+AGG - chr7_3:85194890-85194909 None:intergenic 30.0%
AAAAAGAGAAACTGAGGAAG+TGG - chr7_3:85190236-85190255 None:intergenic 35.0%
TCATGGTAATCCAAACAACA+AGG - chr7_3:85190644-85190663 None:intergenic 35.0%
AAGAGTTCACTATCAGTCTT+TGG - chr7_3:85191396-85191415 None:intergenic 35.0%
ATCCTCTTTCCGAATTAGTT+TGG + chr7_3:85191508-85191527 Msa1132320:CDS 35.0%
! CGAGGGTATATTTCAAATGT+TGG - chr7_3:85191671-85191690 None:intergenic 35.0%
!!! CCTACTTTTTTGAACATCGA+GGG - chr7_3:85191688-85191707 None:intergenic 35.0%
!!! ACCTACTTTTTTGAACATCG+AGG - chr7_3:85191689-85191708 None:intergenic 35.0%
CAGAACGAGGAATACTATTA+AGG - chr7_3:85191742-85191761 None:intergenic 35.0%
! TTCTGAATTTTCTGCAGATC+AGG + chr7_3:85191757-85191776 Msa1132320:intron 35.0%
! GGAGAATTTTGCTCCATAAT+AGG - chr7_3:85191833-85191852 None:intergenic 35.0%
TAATTTATGCCTTCATTGGG+AGG - chr7_3:85191866-85191885 None:intergenic 35.0%
! TTTTTCTATAGGATTCCTGC+TGG - chr7_3:85191963-85191982 None:intergenic 35.0%
CAGGAATCCTATAGAAAAAC+TGG + chr7_3:85191964-85191983 Msa1132320:CDS 35.0%
TTACATGGAGAATGCAAAAC+AGG - chr7_3:85192079-85192098 None:intergenic 35.0%
AAGGAAAAGTCCTTATCAGA+TGG + chr7_3:85192130-85192149 Msa1132320:CDS 35.0%
AGGAAAAGTCCTTATCAGAT+GGG + chr7_3:85192131-85192150 Msa1132320:CDS 35.0%
TGAATTGCTGTCATTATCCA+TGG - chr7_3:85192176-85192195 None:intergenic 35.0%
!!! TTTTTTCCACAGGTAAGAAG+CGG + chr7_3:85192224-85192243 Msa1132320:CDS 35.0%
ATCGACAATGAAGAAACTTC+TGG + chr7_3:85192292-85192311 Msa1132320:CDS 35.0%
AAGAAAGCTCATTCAGAAAC+TGG + chr7_3:85192335-85192354 Msa1132320:CDS 35.0%
ATGTTTCATCAAGAAGGAGA+AGG + chr7_3:85192571-85192590 Msa1132320:CDS 35.0%
! CCATGTACAGTGTTATTACT+TGG - chr7_3:85192613-85192632 None:intergenic 35.0%
CCAAGTAATAACACTGTACA+TGG + chr7_3:85192610-85192629 Msa1132320:CDS 35.0%
! ATCTCTGGAAAACAGGTTAT+TGG - chr7_3:85192649-85192668 None:intergenic 35.0%
TTGTTAAGGCAATTGATCTC+TGG - chr7_3:85192664-85192683 None:intergenic 35.0%
! GAACAATTTTCATTCTCTGC+TGG - chr7_3:85192805-85192824 None:intergenic 35.0%
TTCAAACTTGTGCCTTAGTA+AGG + chr7_3:85192822-85192841 Msa1132320:CDS 35.0%
TTTCTTCCTTGTCCTTACTA+AGG - chr7_3:85192837-85192856 None:intergenic 35.0%
TAGTAAGGACAAGGAAGAAA+TGG + chr7_3:85192837-85192856 Msa1132320:CDS 35.0%
ATTCTCTGCTTTCTTTCTCT+CGG - chr7_3:85192929-85192948 None:intergenic 35.0%
TTTACTTGTGAGGTACATTC+TGG - chr7_3:85193171-85193190 None:intergenic 35.0%
TCAAAACCTTTGTCCATGAA+GGG + chr7_3:85193400-85193419 Msa1132320:CDS 35.0%
!!! TTTTGTGATGGATTCCATCA+TGG - chr7_3:85193482-85193501 None:intergenic 35.0%
TGATGCATTGCATTCTATCT+TGG - chr7_3:85193553-85193572 None:intergenic 35.0%
GCATCATGCAAGAAATATTG+TGG + chr7_3:85193567-85193586 Msa1132320:CDS 35.0%
CATTACTTACTTCAGGATGT+CGG - chr7_3:85193724-85193743 None:intergenic 35.0%
ATGTCACGGTATAAGTTAGT+AGG - chr7_3:85193751-85193770 None:intergenic 35.0%
! GTGGCTTGTATAACTATAAG+TGG + chr7_3:85193984-85194003 Msa1132320:CDS 35.0%
TTAAAATCACACTTTGCCCT+TGG + chr7_3:85194012-85194031 Msa1132320:intron 35.0%
GGTATGATTCTACATTCCAA+GGG - chr7_3:85194031-85194050 None:intergenic 35.0%
AGGTATGATTCTACATTCCA+AGG - chr7_3:85194032-85194051 None:intergenic 35.0%
TTGGAATGTAGAATCATACC+TGG + chr7_3:85194031-85194050 Msa1132320:intron 35.0%
! TTTCACTGAGAGAGATTTTC+TGG - chr7_3:85194161-85194180 None:intergenic 35.0%
AAATCTCTCTCAGTGAAAGT+AGG + chr7_3:85194163-85194182 Msa1132320:CDS 35.0%
AATCTCTCTCAGTGAAAGTA+GGG + chr7_3:85194164-85194183 Msa1132320:CDS 35.0%
GATTTCTTCCTGTACAAAAG+GGG - chr7_3:85194631-85194650 None:intergenic 35.0%
TACAGGAAGAAATCATGGAA+TGG + chr7_3:85194637-85194656 Msa1132320:intron 35.0%
GATATCAGATCTTCTTCAGA+TGG - chr7_3:85194696-85194715 None:intergenic 35.0%
!! TCACCTTTAAGGTGAATAAG+TGG + chr7_3:85194783-85194802 Msa1132320:three_prime_UTR 35.0%
!! CACCTTTAAGGTGAATAAGT+GGG + chr7_3:85194784-85194803 Msa1132320:three_prime_UTR 35.0%
!! ACCTTTAAGGTGAATAAGTG+GGG + chr7_3:85194785-85194804 Msa1132320:three_prime_UTR 35.0%
ATTATCTACGACACATGTCA+TGG - chr7_3:85194826-85194845 None:intergenic 35.0%
!! AGCAGTTGATCCTTGTTGTT+TGG + chr7_3:85190631-85190650 Msa1132320:five_prime_UTR 40.0%
! TTTGTCCTTCTGAAGATGAG+TGG + chr7_3:85191348-85191367 Msa1132320:exon 40.0%
!!! AGTCATTTTTCCAATCGCAC+TGG - chr7_3:85191434-85191453 None:intergenic 40.0%
TGGAAAAATGACTCATGTGC+AGG + chr7_3:85191441-85191460 Msa1132320:CDS 40.0%
TAATTCGGAAAGAGGATCAG+TGG - chr7_3:85191505-85191524 None:intergenic 40.0%
GACCAAACTAATTCGGAAAG+AGG - chr7_3:85191513-85191532 None:intergenic 40.0%
!! AGTTCTCTTTTTCGCGATGT+TGG + chr7_3:85191588-85191607 Msa1132320:CDS 40.0%
CCCTCGATGTTCAAAAAAGT+AGG + chr7_3:85191685-85191704 Msa1132320:intron 40.0%
TCTGCAGAAAATTCAGAACG+AGG - chr7_3:85191755-85191774 None:intergenic 40.0%
TGGAGCAAAATTCTCCATCA+AGG + chr7_3:85191837-85191856 Msa1132320:CDS 40.0%
AGCAAAATTCTCCATCAAGG+AGG + chr7_3:85191840-85191859 Msa1132320:CDS 40.0%
GAGCCTGTAACTGAATACAA+AGG + chr7_3:85191905-85191924 Msa1132320:CDS 40.0%
GAGCCTTTGTATTCAGTTAC+AGG - chr7_3:85191911-85191930 None:intergenic 40.0%
GTAACTGAATACAAAGGCTC+TGG + chr7_3:85191911-85191930 Msa1132320:CDS 40.0%
CTAATTTAACATCCTCCAGC+AGG + chr7_3:85191945-85191964 Msa1132320:CDS 40.0%
!!! ATGCGGATTTTGCTGTTACA+TGG - chr7_3:85192094-85192113 None:intergenic 40.0%
ATGTAACAGCAAAATCCGCA+TGG + chr7_3:85192093-85192112 Msa1132320:CDS 40.0%
ATCCGCATGGCAAAAAACAA+AGG + chr7_3:85192106-85192125 Msa1132320:CDS 40.0%
!!! TGCCTTTGTTTTTTGCCATG+CGG - chr7_3:85192111-85192130 None:intergenic 40.0%
CATGGCAAAAAACAAAGGCA+AGG + chr7_3:85192111-85192130 Msa1132320:CDS 40.0%
GGAAAAGTCCTTATCAGATG+GGG + chr7_3:85192132-85192151 Msa1132320:CDS 40.0%
ATTTGCATCCCCATCTGATA+AGG - chr7_3:85192143-85192162 None:intergenic 40.0%
TTGAAAGCTGTAACAGTGCT+AGG + chr7_3:85192200-85192219 Msa1132320:CDS 40.0%
!!! AGTGCTAGGTTTTTTTCCAC+AGG + chr7_3:85192214-85192233 Msa1132320:CDS 40.0%
!! TCTCAACAGCAGTTGATGAT+TGG + chr7_3:85192253-85192272 Msa1132320:CDS 40.0%
!! CTCAACAGCAGTTGATGATT+GGG + chr7_3:85192254-85192273 Msa1132320:CDS 40.0%
CAGAAACTGGATTTCAAGCA+TGG + chr7_3:85192348-85192367 Msa1132320:CDS 40.0%
TGGATTTCAAGCATGGTGAA+AGG + chr7_3:85192355-85192374 Msa1132320:CDS 40.0%
GGATTTCAAGCATGGTGAAA+GGG + chr7_3:85192356-85192375 Msa1132320:CDS 40.0%
AATCCTGAGCCGAAAAATAC+AGG + chr7_3:85192490-85192509 Msa1132320:CDS 40.0%
!! AATCCTGTATTTTTCGGCTC+AGG - chr7_3:85192496-85192515 None:intergenic 40.0%
! GCAATTGATCTCTGGAAAAC+AGG - chr7_3:85192656-85192675 None:intergenic 40.0%
GGTTCAATATTAGGCTGTGA+CGG - chr7_3:85192742-85192761 None:intergenic 40.0%
AAGCAGAGAATATCAGTCAC+CGG + chr7_3:85192938-85192957 Msa1132320:CDS 40.0%
!! TCCAAAATCCAGTGGTTTTG+AGG + chr7_3:85192999-85193018 Msa1132320:CDS 40.0%
! TCCTCAAAACCACTGGATTT+TGG - chr7_3:85193003-85193022 None:intergenic 40.0%
ATTCACAAACTCGGAGCAAA+TGG + chr7_3:85193089-85193108 Msa1132320:CDS 40.0%
ACGTTTGCAAGGAGATTTGT+TGG + chr7_3:85193117-85193136 Msa1132320:CDS 40.0%
!! GTACATTCTGGTTTGTCTGT+CGG - chr7_3:85193159-85193178 None:intergenic 40.0%
AAGTGAGCTAGAAGATCTTC+AGG + chr7_3:85193254-85193273 Msa1132320:CDS 40.0%
! AATGTTTTCAGCTCAACCAC+TGG + chr7_3:85193328-85193347 Msa1132320:CDS 40.0%
! ATGTTTTCAGCTCAACCACT+GGG + chr7_3:85193329-85193348 Msa1132320:CDS 40.0%
!!! AAGGTTTTGACTTCCGATTC+AGG - chr7_3:85193390-85193409 None:intergenic 40.0%
GTCAAAACCTTTGTCCATGA+AGG + chr7_3:85193399-85193418 Msa1132320:CDS 40.0%
TAGTACCGCCAGATAAAATC+CGG - chr7_3:85193458-85193477 None:intergenic 40.0%
CTTGGCGTTTATAACGTCAT+TGG - chr7_3:85193535-85193554 None:intergenic 40.0%
TATAACATCTCCGTCGAGAT+TGG + chr7_3:85193629-85193648 Msa1132320:CDS 40.0%
! TTCTTTTCAGCCAATCTCGA+CGG - chr7_3:85193642-85193661 None:intergenic 40.0%
AAGATTTCACATGTGCCAGA+GGG + chr7_3:85193660-85193679 Msa1132320:CDS 40.0%
ACTGCATCAAAAATTCCCTC+TGG - chr7_3:85193678-85193697 None:intergenic 40.0%
AGGCTTGCATTACTTACTTC+AGG - chr7_3:85193731-85193750 None:intergenic 40.0%
TACAGTTAGTGTGTAGCAGA+TGG + chr7_3:85193865-85193884 Msa1132320:intron 40.0%
ACAGTTAGTGTGTAGCAGAT+GGG + chr7_3:85193866-85193885 Msa1132320:intron 40.0%
ATCTCTCTCAGTGAAAGTAG+GGG + chr7_3:85194165-85194184 Msa1132320:CDS 40.0%
!! GCTATTTTCCCCTTTTGTAC+AGG + chr7_3:85194620-85194639 Msa1132320:intron 40.0%
AGGAAGAAATCATGGAATGG+TGG + chr7_3:85194640-85194659 Msa1132320:intron 40.0%
TCCCCACTTATTCACCTTAA+AGG - chr7_3:85194789-85194808 None:intergenic 40.0%
TGTATGCAGCACGCCTAATA+AGG + chr7_3:85191075-85191094 Msa1132320:intron 45.0%
CTTCTCCACTCATCTTCAGA+AGG - chr7_3:85191356-85191375 None:intergenic 45.0%
!! CTGCAGATCAGGTTGATCAA+AGG + chr7_3:85191768-85191787 Msa1132320:intron 45.0%
TTCTATAGGATTCCTGCTGG+AGG - chr7_3:85191960-85191979 None:intergenic 45.0%
AACGACACTACCTTGCGTTA+AGG + chr7_3:85192048-85192067 Msa1132320:CDS 45.0%
ACAGGAAGAACCTTAACGCA+AGG - chr7_3:85192061-85192080 None:intergenic 45.0%
CTTGTGCCTTAGTAAGGACA+AGG + chr7_3:85192828-85192847 Msa1132320:CDS 45.0%
TCTGCTTTCTTTCTCTCGGA+TGG - chr7_3:85192925-85192944 None:intergenic 45.0%
AAGACAATCCAGGGAGTCTA+TGG + chr7_3:85192962-85192981 Msa1132320:CDS 45.0%
! CGATTTGCTCCAAAATCCAG+TGG + chr7_3:85192991-85193010 Msa1132320:CDS 45.0%
CTCATCTTCCTCAAAACCAC+TGG - chr7_3:85193010-85193029 None:intergenic 45.0%
ATCCTCGCGAAGATGATGAA+AGG - chr7_3:85193071-85193090 None:intergenic 45.0%
TTCGCGAGGATTCACAAACT+CGG + chr7_3:85193080-85193099 Msa1132320:CDS 45.0%
AAATGGCTTCGACGTTTGCA+AGG + chr7_3:85193106-85193125 Msa1132320:CDS 45.0%
CTGTCGGCATGATATGTTTG+AGG - chr7_3:85193143-85193162 None:intergenic 45.0%
! AAGGCAGACCGGATTTTATC+TGG + chr7_3:85193447-85193466 Msa1132320:CDS 45.0%
CTCGACGGAGATGTTATACT+AGG - chr7_3:85193627-85193646 None:intergenic 45.0%
GAAGATTTCACATGTGCCAG+AGG + chr7_3:85193659-85193678 Msa1132320:CDS 45.0%
TCTCTCTCAGTGAAAGTAGG+GGG + chr7_3:85194166-85194185 Msa1132320:CDS 45.0%
AGTAGGGGGAATCAAGTGTA+TGG + chr7_3:85194180-85194199 Msa1132320:CDS 45.0%
AGGTGAATAAGTGGGGAATC+CGG + chr7_3:85194792-85194811 Msa1132320:three_prime_UTR 45.0%
ACATGTCATGGTTTGAACCC+CGG - chr7_3:85194814-85194833 None:intergenic 45.0%
! TGAGCATAGCTCAGTTGGTA+GGG - chr7_3:85194856-85194875 None:intergenic 45.0%
ATGAGCATAGCTCAGTTGGT+AGG - chr7_3:85194857-85194876 None:intergenic 45.0%
TACCAACTGAGCTATGCTCA+TGG + chr7_3:85194856-85194875 Msa1132320:three_prime_UTR 45.0%
ATAACGCTGACCAGTGCGAT+TGG + chr7_3:85191421-85191440 Msa1132320:CDS 50.0%
! GTTATGCCGCTTCTTACCTG+TGG - chr7_3:85192233-85192252 None:intergenic 50.0%
TCAAGAAGGAGAAGGTGACG+AGG + chr7_3:85192579-85192598 Msa1132320:CDS 50.0%
GCTTCAGAGAGATATGACGC+TGG + chr7_3:85192715-85192734 Msa1132320:CDS 50.0%
AGTCACCGGAAAGACAATCC+AGG + chr7_3:85192952-85192971 Msa1132320:CDS 50.0%
GTCACCGGAAAGACAATCCA+GGG + chr7_3:85192953-85192972 Msa1132320:CDS 50.0%
GACTCCCTGGATTGTCTTTC+CGG - chr7_3:85192960-85192979 None:intergenic 50.0%
CGAGTTATCCATAGACTCCC+TGG - chr7_3:85192973-85192992 None:intergenic 50.0%
GACCTTTCATCATCTTCGCG+AGG + chr7_3:85193066-85193085 Msa1132320:CDS 50.0%
CAGCTGAGCAATCACTGAGT+TGG - chr7_3:85193227-85193246 None:intergenic 50.0%
TGGAACATGAAACTGCCCAG+TGG - chr7_3:85193347-85193366 None:intergenic 50.0%
TGCAGTCCCTTCATGGACAA+AGG - chr7_3:85193409-85193428 None:intergenic 50.0%
AAGACCGGTGCAGATTGACA+AGG + chr7_3:85193428-85193447 Msa1132320:CDS 50.0%
TCTGCCTTGTCAATCTGCAC+CGG - chr7_3:85193435-85193454 None:intergenic 50.0%
TGCAGATTGACAAGGCAGAC+CGG + chr7_3:85193436-85193455 Msa1132320:CDS 50.0%
! GCAGACCGGATTTTATCTGG+CGG + chr7_3:85193450-85193469 Msa1132320:CDS 50.0%
TCTGGCGGTACTATCCATGA+TGG + chr7_3:85193465-85193484 Msa1132320:CDS 50.0%
TTACTTCAGGATGTCGGTGC+GGG - chr7_3:85193718-85193737 None:intergenic 50.0%
CTTACTTCAGGATGTCGGTG+CGG - chr7_3:85193719-85193738 None:intergenic 50.0%
AGCAGATGGGTAACTGCTCA+TGG + chr7_3:85193879-85193898 Msa1132320:intron 50.0%
TGGATCATTCTCGCAACTCG+AGG + chr7_3:85193899-85193918 Msa1132320:CDS 50.0%
GGATCATTCTCGCAACTCGA+GGG + chr7_3:85193900-85193919 Msa1132320:CDS 50.0%
!!! AGGGTTTTTTCTTGCGCCTG+CGG + chr7_3:85193919-85193938 Msa1132320:CDS 50.0%
TGGAGGAACTGGTTACCATG+TGG + chr7_3:85193965-85193984 Msa1132320:CDS 50.0%
CTCAACACCTGCTTCTGAGT+TGG - chr7_3:85194670-85194689 None:intergenic 50.0%
GGTGAATAAGTGGGGAATCC+GGG + chr7_3:85194793-85194812 Msa1132320:three_prime_UTR 50.0%
GTGAATAAGTGGGGAATCCG+GGG + chr7_3:85194794-85194813 Msa1132320:three_prime_UTR 50.0%
TGCCATGAGCATAGCTCAGT+TGG - chr7_3:85194861-85194880 None:intergenic 50.0%
TCATTGGGAGGCCTCCTTGA+TGG - chr7_3:85191854-85191873 None:intergenic 55.0%
TCAAGGAGGCCTCCCAATGA+AGG + chr7_3:85191854-85191873 Msa1132320:CDS 55.0%
!! TACAAAGGCTCTGGTGCTGC+AGG + chr7_3:85191920-85191939 Msa1132320:CDS 55.0%
CTTTCTCTCGGATGGTGCGT+TGG - chr7_3:85192917-85192936 None:intergenic 55.0%
CCATGAAGGGACTGCAAGAC+CGG + chr7_3:85193413-85193432 Msa1132320:CDS 55.0%
! TTTTTCTTGCGCCTGCGGCT+TGG + chr7_3:85193924-85193943 Msa1132320:CDS 55.0%
! TTTTCTTGCGCCTGCGGCTT+GGG + chr7_3:85193925-85193944 Msa1132320:CDS 55.0%
GGCTTGGGAAGTGGGAAGAA+GGG + chr7_3:85193940-85193959 Msa1132320:CDS 55.0%
AAGTGGGAAGAAGGGCTTGG+AGG + chr7_3:85193948-85193967 Msa1132320:CDS 55.0%
GAAGAAGGGCTTGGAGGAAC+TGG + chr7_3:85193954-85193973 Msa1132320:CDS 55.0%
TGGTCTGCCAACTCAGAAGC+AGG + chr7_3:85194660-85194679 Msa1132320:CDS 55.0%
CCGGTCTTGCAGTCCCTTCA+TGG - chr7_3:85193416-85193435 None:intergenic 60.0%
! CGGCTTGGGAAGTGGGAAGA+AGG + chr7_3:85193939-85193958 Msa1132320:CDS 60.0%
GGGAAGTGGGAAGAAGGGCT+TGG + chr7_3:85193945-85193964 Msa1132320:CDS 60.0%
CTTCCCACTTCCCAAGCCGC+AGG - chr7_3:85193938-85193957 None:intergenic 65.0%
! TGCGCCTGCGGCTTGGGAAG+TGG + chr7_3:85193931-85193950 Msa1132320:CDS 70.0%
! GCGCCTGCGGCTTGGGAAGT+GGG + chr7_3:85193932-85193951 Msa1132320:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 85190169 85195044 85190169 ID=Msa1132320;Name=Msa1132320
chr7_3 mRNA 85190169 85195044 85190169 ID=Msa1132320-mRNA-1;Parent=Msa1132320;Name=Msa1132320-mRNA-1;_AED=0.05;_eAED=0.05;_QI=333|1|1|1|0.66|0.57|7|295|856
chr7_3 exon 85190169 85190320 85190169 ID=Msa1132320-mRNA-1:exon:25418;Parent=Msa1132320-mRNA-1
chr7_3 exon 85190596 85190744 85190596 ID=Msa1132320-mRNA-1:exon:25419;Parent=Msa1132320-mRNA-1
chr7_3 exon 85191331 85191630 85191331 ID=Msa1132320-mRNA-1:exon:25420;Parent=Msa1132320-mRNA-1
chr7_3 exon 85191774 85193733 85191774 ID=Msa1132320-mRNA-1:exon:25421;Parent=Msa1132320-mRNA-1
chr7_3 exon 85193884 85194005 85193884 ID=Msa1132320-mRNA-1:exon:25422;Parent=Msa1132320-mRNA-1
chr7_3 exon 85194128 85194240 85194128 ID=Msa1132320-mRNA-1:exon:25423;Parent=Msa1132320-mRNA-1
chr7_3 exon 85194642 85195044 85194642 ID=Msa1132320-mRNA-1:exon:25424;Parent=Msa1132320-mRNA-1
chr7_3 five_prime_UTR 85190169 85190320 85190169 ID=Msa1132320-mRNA-1:five_prime_utr;Parent=Msa1132320-mRNA-1
chr7_3 five_prime_UTR 85190596 85190744 85190596 ID=Msa1132320-mRNA-1:five_prime_utr;Parent=Msa1132320-mRNA-1
chr7_3 five_prime_UTR 85191331 85191362 85191331 ID=Msa1132320-mRNA-1:five_prime_utr;Parent=Msa1132320-mRNA-1
chr7_3 CDS 85191363 85191630 85191363 ID=Msa1132320-mRNA-1:cds;Parent=Msa1132320-mRNA-1
chr7_3 CDS 85191774 85193733 85191774 ID=Msa1132320-mRNA-1:cds;Parent=Msa1132320-mRNA-1
chr7_3 CDS 85193884 85194005 85193884 ID=Msa1132320-mRNA-1:cds;Parent=Msa1132320-mRNA-1
chr7_3 CDS 85194128 85194240 85194128 ID=Msa1132320-mRNA-1:cds;Parent=Msa1132320-mRNA-1
chr7_3 CDS 85194642 85194749 85194642 ID=Msa1132320-mRNA-1:cds;Parent=Msa1132320-mRNA-1
chr7_3 three_prime_UTR 85194750 85195044 85194750 ID=Msa1132320-mRNA-1:three_prime_utr;Parent=Msa1132320-mRNA-1
Gene Sequence

>Msa1132320

ATGAGTGGAGAAGAAAACAAGATAGTAAAACCAAAGACTGATAGTGAACTCTTTCTGAATAACGCTGACCAGTGCGATTGGAAAAATGACTCATGTGCAGGTGCAAATGCAGCTTCAAGAGCTGATATGACATTAGCTACCACTGATCCTCTTTCCGAATTAGTTTGGTCTTCAGATAAAGGTTTAAGTCTTAAATGTGCCGATTCAAGCTTTGCTGATAAAAATAGTTCTCTTTTTCGCGATGTTGGACCTAGCTGCTATAATCAATATCAGGTTGATCAAAGGCCAACTGATGATTTATTACTTCAATTAGATGAACCTAAACCTATTATGGAGCAAAATTCTCCATCAAGGAGGCCTCCCAATGAAGGCATAAATTATGATACTGGTAATGCAGTTGAGCCTGTAACTGAATACAAAGGCTCTGGTGCTGCAGGAACTAATTTAACATCCTCCAGCAGGAATCCTATAGAAAAACTGGAATCTAGTGCCGAGAATGATTTAAGAAATGTTGATGCTGAAAACAAATATGAGGGAAATGAAACGACACTACCTTGCGTTAAGGTTCTTCCTGTTTTGCATTCTCCATGTAACAGCAAAATCCGCATGGCAAAAAACAAAGGCAAGGAAAAGTCCTTATCAGATGGGGATGCAAATGTAAGATTATCCATGGATAATGACAGCAATTCAAGTGTTGAAAGCTGTAACAGTGCTAGGTTTTTTTCCACAGGTAAGAAGCGGCATAACTCTCAACAGCAGTTGATGATTGGGAGTAAAAGAGTCAAAATCGACAATGAAGAAACTTCTGGTTCCAAATCCTACATTAAACAAGAAAGCTCATTCAGAAACTGGATTTCAAGCATGGTGAAAGGGCTCTCACAATCAACTCAAGATGATTCGAACACTTTAGCTGTTAGCCTTGCAAATCCAAATCTTCATAATGCATGGTTTGACGAGAAACTTATCACATGCAAAACGAATCAAAATCCTGAGCCGAAAAATACAGGATTCAAATCCATTTTTCAGTCCATGTATTATCCAAGTTTGAAGAATATAGGAACAAGAATGTTTCATCAAGAAGGAGAAGGTGACGAGGATTTAGAGCCAAGTAATAACACTGTACATGGAATAAATGCTACTCCAATAACCTGTTTTCCAGAGATCAATTGCCTTAACAAACGGCATTTTCAATCAAATAAGTTTGAAGCTGCTTCAGAGAGATATGACGCTGGTCCGTCACAGCCTAATATTGAACCTTTAAATTTTTATAACAGCCAGGAAATAAGCAAAATTAACCCAGCAGAGAATGAAAATTGTTCAAACTTGTGCCTTAGTAAGGACAAGGAAGAAATGGTATCAAATTCATCTTCAATCAGAGAAAATACAAATAATACTGATAATGTAGATTCCAACGCACCATCCGAGAGAAAGAAAGCAGAGAATATCAGTCACCGGAAAGACAATCCAGGGAGTCTATGGATAACTCGATTTGCTCCAAAATCCAGTGGTTTTGAGGAAGATGAGAGAAATAACAGCCAAAAGTTGAAGTATATGTTCAACGACCTTTCATCATCTTCGCGAGGATTCACAAACTCGGAGCAAATGGCTTCGACGTTTGCAAGGAGATTTGTTGGCCTCAAACATATCATGCCGACAGACAAACCAGAATGTACCTCACAAGTAAACATGTTTTGTTTGTTTTGTGGAAAAAGAGGTCACCAACTCAGTGATTGCTCAGCTGTTGCAGAAAGTGAGCTAGAAGATCTTCAGGAAAATGTAAATTCATATGAAGGTCCGGAAAATTTTCCTTTTATGTGCATTAAATGTTTTCAGCTCAACCACTGGGCAGTTTCATGTTCCAGTTCAATCTCAAAAATAAAACCTGAATCGGAAGTCAAAACCTTTGTCCATGAAGGGACTGCAAGACCGGTGCAGATTGACAAGGCAGACCGGATTTTATCTGGCGGTACTATCCATGATGGAATCCATCACAAAACAGATCAGAATATTAATTTAAAGCGGAAATCCAATGACGTTATAAACGCCAAGATAGAATGCAATGCATCATGCAAGAAATATTGTGGTTCTAGTTCAAAGGAAAACAAATACAAAGAGAAACCTAGTATAACATCTCCGTCGAGATTGGCTGAAAAGAAGATTTCACATGTGCCAGAGGGAATTTTTGATGCAGTGAAAAAGCTTCAATTGTCCCGCACCGACATCCTGAAATGGGTAACTGCTCATGGATCATTCTCGCAACTCGAGGGTTTTTTCTTGCGCCTGCGGCTTGGGAAGTGGGAAGAAGGGCTTGGAGGAACTGGTTACCATGTGGCTTGTATAACTATAAGTGAATCCGAGAAACATAGTTTAGAGAAGCATACCAGAAAATCTCTCTCAGTGAAAGTAGGGGGAATCAAGTGTATGGTAGAAAGTCATTATATATCCAATCAAGATTTTCTTGAGGAAGAAATCATGGAATGGTGGTCTGCCAACTCAGAAGCAGGTGTTGAGATTCCATCTGAAGAAGATCTGATATCGAAATTCAAAAAGAAACAAATGCTAGGCCTTTAA
Protein sequence

>Msa1132320

MSGEENKIVKPKTDSELFLNNADQCDWKNDSCAGANAASRADMTLATTDPLSELVWSSDKGLSLKCADSSFADKNSSLFRDVGPSCYNQYQVDQRPTDDLLLQLDEPKPIMEQNSPSRRPPNEGINYDTGNAVEPVTEYKGSGAAGTNLTSSSRNPIEKLESSAENDLRNVDAENKYEGNETTLPCVKVLPVLHSPCNSKIRMAKNKGKEKSLSDGDANVRLSMDNDSNSSVESCNSARFFSTGKKRHNSQQQLMIGSKRVKIDNEETSGSKSYIKQESSFRNWISSMVKGLSQSTQDDSNTLAVSLANPNLHNAWFDEKLITCKTNQNPEPKNTGFKSIFQSMYYPSLKNIGTRMFHQEGEGDEDLEPSNNTVHGINATPITCFPEINCLNKRHFQSNKFEAASERYDAGPSQPNIEPLNFYNSQEISKINPAENENCSNLCLSKDKEEMVSNSSSIRENTNNTDNVDSNAPSERKKAENISHRKDNPGSLWITRFAPKSSGFEEDERNNSQKLKYMFNDLSSSSRGFTNSEQMASTFARRFVGLKHIMPTDKPECTSQVNMFCLFCGKRGHQLSDCSAVAESELEDLQENVNSYEGPENFPFMCIKCFQLNHWAVSCSSSISKIKPESEVKTFVHEGTARPVQIDKADRILSGGTIHDGIHHKTDQNINLKRKSNDVINAKIECNASCKKYCGSSSKENKYKEKPSITSPSRLAEKKISHVPEGIFDAVKKLQLSRTDILKWVTAHGSFSQLEGFFLRLRLGKWEEGLGGTGYHVACITISESEKHSLEKHTRKSLSVKVGGIKCMVESHYISNQDFLEEEIMEWWSANSEAGVEIPSEEDLISKFKKKQMLGL*