Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974290 | XP_013450954.2 | 93.868 | 424 | 26 | 0 | 1 | 424 | 1 | 424 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974290 | sp|Q9FLE8|Y5986_ARATH | 47.368 | 437 | 168 | 14 | 1 | 423 | 1 | 389 | 7.71e-113 | 339 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974290 | A0A396H9Q3 | 93.868 | 424 | 26 | 0 | 1 | 424 | 1 | 424 | 0.0 | 816 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011930 | Msa0974290 | 0.805568 | 1.253539e-49 | -8.615850e-47 |
| Msa0035120 | Msa0974290 | 0.831519 | 1.594254e-55 | -8.615850e-47 |
| Msa0052870 | Msa0974290 | 0.813259 | 2.801612e-51 | -8.615850e-47 |
| Msa0089980 | Msa0974290 | 0.802724 | 4.896554e-49 | -8.615850e-47 |
| Msa0098470 | Msa0974290 | 0.813269 | 2.787490e-51 | -8.615850e-47 |
| Msa0106620 | Msa0974290 | 0.815941 | 7.143486e-52 | -8.615850e-47 |
| Msa0106710 | Msa0974290 | 0.812987 | 3.214249e-51 | -8.615850e-47 |
| Msa0108410 | Msa0974290 | 0.813573 | 2.390274e-51 | -8.615850e-47 |
| Msa0626450 | Msa0974290 | 0.800633 | 1.315362e-48 | -8.615850e-47 |
| Msa0626490 | Msa0974290 | 0.802739 | 4.863854e-49 | -8.615850e-47 |
| Msa0664540 | Msa0974290 | 0.805084 | 1.583239e-49 | -8.615850e-47 |
| Msa0664600 | Msa0974290 | 0.805573 | 1.250920e-49 | -8.615850e-47 |
| Msa0751260 | Msa0974290 | 0.826045 | 3.365101e-54 | -8.615850e-47 |
| Msa0795070 | Msa0974290 | 0.825256 | 5.175488e-54 | -8.615850e-47 |
| Msa0828240 | Msa0974290 | 0.805007 | 1.642982e-49 | -8.615850e-47 |
| Msa0833530 | Msa0974290 | 0.819937 | 8.933613e-53 | -8.615850e-47 |
| Msa0138360 | Msa0974290 | 0.804345 | 2.259165e-49 | -8.615850e-47 |
| Msa0154440 | Msa0974290 | 0.802290 | 6.018081e-49 | -8.615850e-47 |
| Msa0170210 | Msa0974290 | 0.801774 | 7.683050e-49 | -8.615850e-47 |
| Msa0174450 | Msa0974290 | 0.809325 | 2.000347e-50 | -8.615850e-47 |
| Msa0181230 | Msa0974290 | 0.805782 | 1.130639e-49 | -8.615850e-47 |
| Msa0187030 | Msa0974290 | 0.831782 | 1.373584e-55 | -8.615850e-47 |
| Msa0207350 | Msa0974290 | 0.823216 | 1.561019e-53 | -8.615850e-47 |
| Msa0227340 | Msa0974290 | 0.805790 | 1.125856e-49 | -8.615850e-47 |
| Msa0237420 | Msa0974290 | 0.805922 | 1.056178e-49 | -8.615850e-47 |
| Msa0432160 | Msa0974290 | 0.806122 | 9.586814e-50 | -8.615850e-47 |
| Msa0467100 | Msa0974290 | 0.801366 | 9.313897e-49 | -8.615850e-47 |
| Msa0474730 | Msa0974290 | 0.810561 | 1.084134e-50 | -8.615850e-47 |
| Msa0476680 | Msa0974290 | 0.809032 | 2.312093e-50 | -8.615850e-47 |
| Msa0251710 | Msa0974290 | 0.808832 | 2.551477e-50 | -8.615850e-47 |
| Msa0264830 | Msa0974290 | 0.811202 | 7.877546e-51 | -8.615850e-47 |
| Msa0279850 | Msa0974290 | 0.803399 | 3.551996e-49 | -8.615850e-47 |
| Msa0290720 | Msa0974290 | 0.804401 | 2.198857e-49 | -8.615850e-47 |
| Msa0300320 | Msa0974290 | 0.803648 | 3.153550e-49 | -8.615850e-47 |
| Msa0302870 | Msa0974290 | 0.804987 | 1.659084e-49 | -8.615850e-47 |
| Msa0307570 | Msa0974290 | 0.806499 | 7.984883e-50 | -8.615850e-47 |
| Msa0317970 | Msa0974290 | 0.814381 | 1.586264e-51 | -8.615850e-47 |
| Msa0322900 | Msa0974290 | 0.809100 | 2.235926e-50 | -8.615850e-47 |
| Msa0340340 | Msa0974290 | 0.802619 | 5.147263e-49 | -8.615850e-47 |
| Msa0485240 | Msa0974290 | 0.826744 | 2.292692e-54 | -8.615850e-47 |
| Msa0521010 | Msa0974290 | 0.805048 | 1.610847e-49 | -8.615850e-47 |
| Msa0527190 | Msa0974290 | 0.803137 | 4.023533e-49 | -8.615850e-47 |
| Msa0556010 | Msa0974290 | 0.821989 | 3.010750e-53 | -8.615850e-47 |
| Msa0562570 | Msa0974290 | 0.801078 | 1.067025e-48 | -8.615850e-47 |
| Msa0579660 | Msa0974290 | 0.839854 | 1.234903e-57 | -8.615850e-47 |
| Msa0581690 | Msa0974290 | 0.822748 | 2.006653e-53 | -8.615850e-47 |
| Msa0870520 | Msa0974290 | 0.813706 | 2.234623e-51 | -8.615850e-47 |
| Msa0870540 | Msa0974290 | 0.803557 | 3.292868e-49 | -8.615850e-47 |
| Msa0871720 | Msa0974290 | 0.847160 | 1.378890e-59 | -8.615850e-47 |
| Msa0936380 | Msa0974290 | 0.817390 | 3.380145e-52 | -8.615850e-47 |
| Msa0937020 | Msa0974290 | 0.872206 | 3.798930e-67 | -8.615850e-47 |
| Msa0973140 | Msa0974290 | 0.812804 | 3.526032e-51 | -8.615850e-47 |
| Msa0974290 | Msa1006810 | 0.834541 | 2.823866e-56 | -8.615850e-47 |
| Msa0974290 | Msa1022820 | 0.802251 | 6.130079e-49 | -8.615850e-47 |
| Msa0974290 | Msa1034500 | 0.829740 | 4.347272e-55 | -8.615850e-47 |
| Msa0974290 | Msa1061980 | 0.802904 | 4.496678e-49 | -8.615850e-47 |
| Msa0974290 | Msa1085330 | 0.820089 | 8.244839e-53 | -8.615850e-47 |
| Msa0974290 | Msa1089450 | 0.803759 | 2.990683e-49 | -8.615850e-47 |
| Msa0974290 | Msa1145810 | 0.807268 | 5.491269e-50 | -8.615850e-47 |
| Msa0974290 | Msa1226270 | 0.803807 | 2.922217e-49 | -8.615850e-47 |
| Msa0974290 | Msa1348090 | 0.834554 | 2.802744e-56 | -8.615850e-47 |
| Msa0974290 | Msa1371520 | 0.804400 | 2.200210e-49 | -8.615850e-47 |
| Msa0974290 | Msa1418240 | 0.833990 | 3.881782e-56 | -8.615850e-47 |
| Msa0974290 | Msa1453360 | 0.827581 | 1.445354e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974290 | MtrunA17_Chr6g0453031 | 93.868 | 424 | 26 | 0 | 1 | 424 | 1 | 424 | 0.0 | 816 |
| Msa0974290 | MtrunA17_Chr7g0217121 | 51.688 | 474 | 138 | 15 | 1 | 424 | 1 | 433 | 1.98e-129 | 380 |
| Msa0974290 | MtrunA17_Chr3g0089011 | 87.742 | 155 | 19 | 0 | 270 | 424 | 1 | 155 | 1.04e-82 | 250 |
| Msa0974290 | MtrunA17_Chr5g0412021 | 86.408 | 103 | 14 | 0 | 299 | 401 | 1 | 103 | 1.99e-53 | 173 |
| Msa0974290 | MtrunA17_Chr7g0248731 | 72.222 | 126 | 21 | 2 | 299 | 424 | 1 | 112 | 2.18e-51 | 168 |
| Msa0974290 | MtrunA17_Chr1g0171871 | 31.849 | 449 | 195 | 15 | 1 | 423 | 1 | 364 | 4.89e-49 | 170 |
| Msa0974290 | MtrunA17_Chr7g0256501 | 28.855 | 454 | 204 | 14 | 15 | 423 | 46 | 425 | 8.75e-44 | 158 |
| Msa0974290 | MtrunA17_Chr3g0105871 | 45.455 | 165 | 71 | 3 | 258 | 422 | 87 | 232 | 7.73e-37 | 134 |
| Msa0974290 | MtrunA17_Chr5g0437471 | 43.636 | 165 | 73 | 4 | 260 | 424 | 96 | 240 | 2.79e-36 | 133 |
| Msa0974290 | MtrunA17_Chr3g0083531 | 41.618 | 173 | 81 | 5 | 250 | 422 | 108 | 260 | 3.16e-36 | 134 |
| Msa0974290 | MtrunA17_Chr8g0352771 | 43.976 | 166 | 78 | 3 | 259 | 424 | 106 | 256 | 4.70e-36 | 133 |
| Msa0974290 | MtrunA17_Chr7g0266401 | 43.558 | 163 | 72 | 3 | 261 | 423 | 263 | 405 | 1.45e-33 | 130 |
| Msa0974290 | MtrunA17_Chr5g0431071 | 41.317 | 167 | 74 | 4 | 258 | 422 | 109 | 253 | 9.30e-33 | 124 |
| Msa0974290 | MtrunA17_Chr3g0113971 | 37.306 | 193 | 99 | 5 | 234 | 424 | 64 | 236 | 1.56e-32 | 123 |
| Msa0974290 | MtrunA17_Chr7g0267591 | 39.877 | 163 | 87 | 4 | 261 | 423 | 128 | 279 | 5.01e-30 | 117 |
| Msa0974290 | MtrunA17_Chr1g0196971 | 32.707 | 266 | 133 | 9 | 166 | 422 | 140 | 368 | 1.24e-28 | 115 |
| Msa0974290 | MtrunA17_Chr8g0388481 | 39.881 | 168 | 82 | 5 | 259 | 422 | 215 | 367 | 2.26e-27 | 112 |
| Msa0974290 | MtrunA17_Chr8g0392761 | 41.279 | 172 | 88 | 4 | 251 | 422 | 115 | 273 | 2.32e-25 | 104 |
| Msa0974290 | MtrunA17_Chr4g0060701 | 64.179 | 67 | 23 | 1 | 336 | 401 | 18 | 84 | 5.50e-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0974290 | AT5G39865.1 | 47.368 | 437 | 168 | 14 | 1 | 423 | 1 | 389 | 7.83e-114 | 339 |
| Msa0974290 | AT3G28850.1 | 44.894 | 470 | 169 | 19 | 1 | 423 | 1 | 427 | 5.58e-94 | 290 |
| Msa0974290 | AT2G41330.1 | 31.938 | 454 | 184 | 16 | 15 | 424 | 30 | 402 | 1.70e-50 | 176 |
| Msa0974290 | AT3G57070.1 | 31.938 | 454 | 188 | 17 | 20 | 424 | 36 | 417 | 1.75e-49 | 173 |
| Msa0974290 | AT5G58530.1 | 39.560 | 182 | 87 | 3 | 249 | 424 | 103 | 267 | 1.15e-37 | 138 |
| Msa0974290 | AT5G13810.1 | 38.725 | 204 | 105 | 5 | 221 | 422 | 87 | 272 | 1.93e-36 | 135 |
| Msa0974290 | AT1G64500.1 | 40.606 | 165 | 86 | 4 | 259 | 422 | 212 | 365 | 2.69e-33 | 129 |
| Msa0974290 | AT4G10630.1 | 31.833 | 311 | 163 | 7 | 119 | 422 | 65 | 333 | 1.03e-30 | 120 |
| Msa0974290 | AT5G06470.1 | 39.394 | 165 | 86 | 3 | 258 | 422 | 88 | 238 | 5.05e-29 | 114 |
| Msa0974290 | AT5G03870.1 | 28.671 | 429 | 199 | 15 | 35 | 422 | 21 | 383 | 1.33e-26 | 110 |
| Msa0974290 | AT1G32760.1 | 42.945 | 163 | 82 | 4 | 260 | 422 | 162 | 313 | 3.29e-26 | 108 |
| Msa0974290 | AT3G11773.1 | 36.875 | 160 | 80 | 3 | 263 | 422 | 11 | 149 | 2.32e-25 | 101 |
| Msa0974290 | AT5G01420.1 | 32.727 | 165 | 92 | 3 | 258 | 422 | 255 | 400 | 3.70e-18 | 86.3 |
| Msa0974290 | AT3G11773.2 | 34.884 | 129 | 63 | 3 | 294 | 422 | 92 | 199 | 4.94e-17 | 79.7 |
Find 82 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTATCATCATGCAATTTC+TGG | 0.115182 | 6_4:-7251544 | None:intergenic |
| ATCAACAACATTAGGTTCTT+TGG | 0.176849 | 6_4:+7250671 | Msa0974290:CDS |
| GGATTCTTGGCAATAGATTT+TGG | 0.183871 | 6_4:-7250885 | None:intergenic |
| GAGAAGCTTCTTAATTGATT+TGG | 0.246490 | 6_4:-7250990 | None:intergenic |
| GGATTACCAAAGGTCTTTAT+TGG | 0.262282 | 6_4:+7251491 | Msa0974290:CDS |
| AGAGATGTGTCAATGCATTT+AGG | 0.289518 | 6_4:+7251416 | Msa0974290:CDS |
| TCCTTCAAAGCCTAGTTTCA+TGG | 0.296565 | 6_4:+7251043 | Msa0974290:CDS |
| TGTCCTCATTGCAATGAAAA+TGG | 0.298206 | 6_4:+7251755 | Msa0974290:CDS |
| TGTTGTTGTGATTGGATTCT+TGG | 0.304537 | 6_4:-7250898 | None:intergenic |
| CTTCTAGAGACAGAGCAATA+AGG | 0.309913 | 6_4:-7250582 | None:intergenic |
| ATGAGGATTGTTGCAAAGTT+AGG | 0.312147 | 6_4:+7251357 | Msa0974290:CDS |
| TTCTAGAGACAGAGCAATAA+GGG | 0.325660 | 6_4:-7250581 | None:intergenic |
| CCCTCTTGCTTCTCTTGCAA+TGG | 0.331746 | 6_4:-7251200 | None:intergenic |
| GCTTTGACATCAACAACATT+AGG | 0.353683 | 6_4:+7250663 | Msa0974290:CDS |
| CATCAACACATGGGAACTAA+TGG | 0.354432 | 6_4:+7250935 | Msa0974290:CDS |
| CATTGCAATGAGGACACCTT+TGG | 0.363064 | 6_4:-7251748 | None:intergenic |
| TCACAAGGTGTTGTTGTGAT+TGG | 0.372377 | 6_4:-7250906 | None:intergenic |
| GCTTTGAGCGAAGTTGAATA+TGG | 0.381871 | 6_4:-7250729 | None:intergenic |
| TTCCTTCCAATAAAGACCTT+TGG | 0.389330 | 6_4:-7251497 | None:intergenic |
| AATTGATTTGGTGATTGAAA+AGG | 0.420860 | 6_4:-7250978 | None:intergenic |
| TCCATGAAACTAGGCTTTGA+AGG | 0.426809 | 6_4:-7251044 | None:intergenic |
| TTGTGTGAGTTCCAAGCAAA+AGG | 0.433319 | 6_4:+7250539 | Msa0974290:CDS |
| TGATTTACACAAACCAAAGT+TGG | 0.433774 | 6_4:+7251082 | Msa0974290:CDS |
| TTACTTAGTGAAGGGAACTA+TGG | 0.443250 | 6_4:+7251461 | Msa0974290:CDS |
| AACGGATTTGAGGTCGGAAA+AGG | 0.453584 | 6_4:+7250768 | Msa0974290:CDS |
| GAAAGGATTGATGACATTGA+AGG | 0.460800 | 6_4:+7251593 | Msa0974290:CDS |
| ATAATCATATGATCCAACTT+TGG | 0.462563 | 6_4:-7251095 | None:intergenic |
| GATTGTGAGGTTGGTGAGTG+TGG | 0.464732 | 6_4:+7251722 | Msa0974290:CDS |
| TTTGAAAGGATTGGGCATAA+GGG | 0.468130 | 6_4:+7251385 | Msa0974290:CDS |
| GAAGATGATGATTGTGAGGT+TGG | 0.472290 | 6_4:+7251713 | Msa0974290:CDS |
| TTTCATGTATTCCAATGGTA+AGG | 0.480711 | 6_4:+7250791 | Msa0974290:CDS |
| TACCAAAGGTCTTTATTGGA+AGG | 0.497940 | 6_4:+7251495 | Msa0974290:CDS |
| CTCAAAGAGTTACTTAGTGA+AGG | 0.498994 | 6_4:+7251452 | Msa0974290:CDS |
| GTTGGATCATATGATTATTG+AGG | 0.501173 | 6_4:+7251100 | Msa0974290:CDS |
| ATTCTCACCAACCTTACCAT+TGG | 0.502034 | 6_4:-7250802 | None:intergenic |
| GATTGCCACTTATGAGAAGA+AGG | 0.514269 | 6_4:+7251286 | Msa0974290:CDS |
| GCGGACAATACCTCAGAAAA+CGG | 0.516134 | 6_4:+7250750 | Msa0974290:CDS |
| ACTTCCATAGCATGTTTCAC+AGG | 0.520426 | 6_4:-7251660 | None:intergenic |
| GCAAGAGAAGCAAGAGGGGA+TGG | 0.520846 | 6_4:+7251205 | Msa0974290:CDS |
| GACATTGAAGGAGGTGATGG+TGG | 0.521306 | 6_4:+7251605 | Msa0974290:CDS |
| ATGTATTCCAATGGTAAGGT+TGG | 0.527759 | 6_4:+7250795 | Msa0974290:CDS |
| TCATCATTCTCCATGAAACT+AGG | 0.532643 | 6_4:-7251053 | None:intergenic |
| CAAAGAAGAGAATGAAAATG+AGG | 0.536620 | 6_4:+7250827 | Msa0974290:CDS |
| TACCTCAGAAAACGGATTTG+AGG | 0.538040 | 6_4:+7250758 | Msa0974290:CDS |
| AGTTGTAAAATCTACTATGA+AGG | 0.542921 | 6_4:+7251680 | Msa0974290:CDS |
| AATTGCTTGATTGTTATGAA+AGG | 0.548553 | 6_4:+7251576 | Msa0974290:CDS |
| GAAATACATTGGTGGAGTTG+AGG | 0.554005 | 6_4:+7251517 | Msa0974290:CDS |
| AGTGAAGGGAACTATGGTAA+AGG | 0.556776 | 6_4:+7251467 | Msa0974290:CDS |
| AAAGGTTTCATGTATTCCAA+TGG | 0.557698 | 6_4:+7250786 | Msa0974290:CDS |
| TTTATTGGAAGGAAATACAT+TGG | 0.560125 | 6_4:+7251506 | Msa0974290:CDS |
| GACATGGTCTAATATGATTG+AGG | 0.564318 | 6_4:+7250854 | Msa0974290:CDS |
| GAAGGGAACTATGGTAAAGG+AGG | 0.573000 | 6_4:+7251470 | Msa0974290:CDS |
| GAACTTGTATCTCATAGTCA+AGG | 0.579238 | 6_4:+7250693 | Msa0974290:CDS |
| AGTTTCATGGAGAATGATGA+TGG | 0.580432 | 6_4:+7251056 | Msa0974290:CDS |
| CATTGCAAGAGAAGCAAGAG+GGG | 0.583235 | 6_4:+7251201 | Msa0974290:CDS |
| GTATCTCATAGTCAAGGCAA+TGG | 0.586380 | 6_4:+7250699 | Msa0974290:CDS |
| AATCACAACAACACCTTGTG+AGG | 0.586414 | 6_4:+7250908 | Msa0974290:CDS |
| TCAAAGAGTTACTTAGTGAA+GGG | 0.588614 | 6_4:+7251453 | Msa0974290:CDS |
| TGTGTGAGTTCCAAGCAAAA+GGG | 0.588882 | 6_4:+7250540 | Msa0974290:CDS |
| ATTGGAAGGAAATACATTGG+TGG | 0.594677 | 6_4:+7251509 | Msa0974290:CDS |
| CTTCCATAGCATGTTTCACA+GGG | 0.609018 | 6_4:-7251659 | None:intergenic |
| GATGGTGGATGTGAGGCTTG+TGG | 0.611737 | 6_4:+7251620 | Msa0974290:CDS |
| ATGAAAATGAGGCAAAGACA+TGG | 0.613400 | 6_4:+7250838 | Msa0974290:CDS |
| GATGACATTGAAGGAGGTGA+TGG | 0.620042 | 6_4:+7251602 | Msa0974290:CDS |
| CCATTGCAAGAGAAGCAAGA+GGG | 0.622568 | 6_4:+7251200 | Msa0974290:CDS |
| GTGAGGACATCATCAACACA+TGG | 0.623721 | 6_4:+7250925 | Msa0974290:CDS |
| GTTCCCTGTGAAACATGCTA+TGG | 0.624671 | 6_4:+7251656 | Msa0974290:CDS |
| CATCATCCACCTCAAAACAA+AGG | 0.631218 | 6_4:+7250621 | Msa0974290:CDS |
| GATCATATGATTATTGAGGA+CGG | 0.631472 | 6_4:+7251104 | Msa0974290:CDS |
| AGGAGGTGATGGTGGATGTG+AGG | 0.631666 | 6_4:+7251613 | Msa0974290:CDS |
| AACACATGGGAACTAATGGA+AGG | 0.650905 | 6_4:+7250939 | Msa0974290:CDS |
| GCCATTGCAAGAGAAGCAAG+AGG | 0.651463 | 6_4:+7251199 | Msa0974290:CDS |
| TCTAGAGACAGAGCAATAAG+GGG | 0.653504 | 6_4:-7250580 | None:intergenic |
| TCAGAAAACGGATTTGAGGT+CGG | 0.654856 | 6_4:+7250762 | Msa0974290:CDS |
| ATATTCAACTTCGCTCAAAG+CGG | 0.658075 | 6_4:+7250731 | Msa0974290:CDS |
| AGGATTGATGACATTGAAGG+AGG | 0.665821 | 6_4:+7251596 | Msa0974290:CDS |
| TGAAGAAGATGATGATTGTG+AGG | 0.670498 | 6_4:+7251709 | Msa0974290:CDS |
| TGGTAAAGGAGGATTACCAA+AGG | 0.688045 | 6_4:+7251481 | Msa0974290:CDS |
| GTGTTGATGATGTCCTCACA+AGG | 0.697785 | 6_4:-7250921 | None:intergenic |
| TGAGGACATCATCAACACAT+GGG | 0.714205 | 6_4:+7250926 | Msa0974290:CDS |
| TATGAACTAGAAACAACACA+TGG | 0.724959 | 6_4:-7251792 | None:intergenic |
| TTGGTGAGTGTGGATTCCAA+AGG | 0.730787 | 6_4:+7251732 | Msa0974290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTGATGATTGTAAAG+TGG | + | chr6_4:7251160-7251179 | Msa0974290:CDS | 20.0% |
| !!! | AAATTTTGATGATTGTAAAG+TGG | + | chr6_4:7251160-7251179 | Msa0974290:CDS | 20.0% |
| !!! | AATTGATTTGGTGATTGAAA+AGG | - | chr6_4:7250981-7251000 | None:intergenic | 25.0% |
| !! | TCTTTTGATGTTAATGTCAA+TGG | + | chr6_4:7251011-7251030 | Msa0974290:CDS | 25.0% |
| ! | ATAATCATATGATCCAACTT+TGG | - | chr6_4:7251098-7251117 | None:intergenic | 25.0% |
| !! | AAAGTTAGGATGATTTTGAA+AGG | + | chr6_4:7251371-7251390 | Msa0974290:CDS | 25.0% |
| ! | TTTATTGGAAGGAAATACAT+TGG | + | chr6_4:7251506-7251525 | Msa0974290:CDS | 25.0% |
| ! | AATTGCTTGATTGTTATGAA+AGG | + | chr6_4:7251576-7251595 | Msa0974290:CDS | 25.0% |
| ! | AGTTGTAAAATCTACTATGA+AGG | + | chr6_4:7251680-7251699 | Msa0974290:CDS | 25.0% |
| !!! | AATTGATTTGGTGATTGAAA+AGG | - | chr6_4:7250981-7251000 | None:intergenic | 25.0% |
| !! | TCTTTTGATGTTAATGTCAA+TGG | + | chr6_4:7251011-7251030 | Msa0974290:CDS | 25.0% |
| ! | ATAATCATATGATCCAACTT+TGG | - | chr6_4:7251098-7251117 | None:intergenic | 25.0% |
| !! | AAAGTTAGGATGATTTTGAA+AGG | + | chr6_4:7251371-7251390 | Msa0974290:CDS | 25.0% |
| ! | TTTATTGGAAGGAAATACAT+TGG | + | chr6_4:7251506-7251525 | Msa0974290:CDS | 25.0% |
| ! | AATTGCTTGATTGTTATGAA+AGG | + | chr6_4:7251576-7251595 | Msa0974290:CDS | 25.0% |
| ! | AGTTGTAAAATCTACTATGA+AGG | + | chr6_4:7251680-7251699 | Msa0974290:CDS | 25.0% |
| !!! | TAACTATCTCCTTTGTTTTG+AGG | - | chr6_4:7250633-7250652 | None:intergenic | 30.0% |
| ATCAACAACATTAGGTTCTT+TGG | + | chr6_4:7250671-7250690 | Msa0974290:CDS | 30.0% | |
| AAAGGTTTCATGTATTCCAA+TGG | + | chr6_4:7250786-7250805 | Msa0974290:CDS | 30.0% | |
| TTTCATGTATTCCAATGGTA+AGG | + | chr6_4:7250791-7250810 | Msa0974290:CDS | 30.0% | |
| CAAAGAAGAGAATGAAAATG+AGG | + | chr6_4:7250827-7250846 | Msa0974290:CDS | 30.0% | |
| GAGAAGCTTCTTAATTGATT+TGG | - | chr6_4:7250993-7251012 | None:intergenic | 30.0% | |
| TGATTTACACAAACCAAAGT+TGG | + | chr6_4:7251082-7251101 | Msa0974290:CDS | 30.0% | |
| GTTGGATCATATGATTATTG+AGG | + | chr6_4:7251100-7251119 | Msa0974290:CDS | 30.0% | |
| GATCATATGATTATTGAGGA+CGG | + | chr6_4:7251104-7251123 | Msa0974290:CDS | 30.0% | |
| ! | GACAAAAAGATTCTCTTTTG+AGG | + | chr6_4:7251229-7251248 | Msa0974290:CDS | 30.0% |
| ! | TTTTTCCTTCTTCTCATAAG+TGG | - | chr6_4:7251294-7251313 | None:intergenic | 30.0% |
| TATGGTGAGAAAAACTTATG+AGG | + | chr6_4:7251340-7251359 | Msa0974290:CDS | 30.0% | |
| !! | TAGGATGATTTTGAAAGGAT+TGG | + | chr6_4:7251376-7251395 | Msa0974290:CDS | 30.0% |
| !! | AGGATGATTTTGAAAGGATT+GGG | + | chr6_4:7251377-7251396 | Msa0974290:CDS | 30.0% |
| TCAAAGAGTTACTTAGTGAA+GGG | + | chr6_4:7251453-7251472 | Msa0974290:CDS | 30.0% | |
| TCTTATCATCATGCAATTTC+TGG | - | chr6_4:7251547-7251566 | None:intergenic | 30.0% | |
| !!! | TAACTATCTCCTTTGTTTTG+AGG | - | chr6_4:7250633-7250652 | None:intergenic | 30.0% |
| ATCAACAACATTAGGTTCTT+TGG | + | chr6_4:7250671-7250690 | Msa0974290:CDS | 30.0% | |
| AAAGGTTTCATGTATTCCAA+TGG | + | chr6_4:7250786-7250805 | Msa0974290:CDS | 30.0% | |
| TTTCATGTATTCCAATGGTA+AGG | + | chr6_4:7250791-7250810 | Msa0974290:CDS | 30.0% | |
| CAAAGAAGAGAATGAAAATG+AGG | + | chr6_4:7250827-7250846 | Msa0974290:CDS | 30.0% | |
| GAGAAGCTTCTTAATTGATT+TGG | - | chr6_4:7250993-7251012 | None:intergenic | 30.0% | |
| TGATTTACACAAACCAAAGT+TGG | + | chr6_4:7251082-7251101 | Msa0974290:CDS | 30.0% | |
| GTTGGATCATATGATTATTG+AGG | + | chr6_4:7251100-7251119 | Msa0974290:CDS | 30.0% | |
| GATCATATGATTATTGAGGA+CGG | + | chr6_4:7251104-7251123 | Msa0974290:CDS | 30.0% | |
| ! | GACAAAAAGATTCTCTTTTG+AGG | + | chr6_4:7251229-7251248 | Msa0974290:CDS | 30.0% |
| ! | TTTTTCCTTCTTCTCATAAG+TGG | - | chr6_4:7251294-7251313 | None:intergenic | 30.0% |
| TATGGTGAGAAAAACTTATG+AGG | + | chr6_4:7251340-7251359 | Msa0974290:CDS | 30.0% | |
| !! | TAGGATGATTTTGAAAGGAT+TGG | + | chr6_4:7251376-7251395 | Msa0974290:CDS | 30.0% |
| !! | AGGATGATTTTGAAAGGATT+GGG | + | chr6_4:7251377-7251396 | Msa0974290:CDS | 30.0% |
| TCAAAGAGTTACTTAGTGAA+GGG | + | chr6_4:7251453-7251472 | Msa0974290:CDS | 30.0% | |
| TCTTATCATCATGCAATTTC+TGG | - | chr6_4:7251547-7251566 | None:intergenic | 30.0% | |
| ! | ATGACAATATCCCTTTTGCT+TGG | - | chr6_4:7250553-7250572 | None:intergenic | 35.0% |
| ! | TTCTAGAGACAGAGCAATAA+GGG | - | chr6_4:7250584-7250603 | None:intergenic | 35.0% |
| GCTTTGACATCAACAACATT+AGG | + | chr6_4:7250663-7250682 | Msa0974290:CDS | 35.0% | |
| GAACTTGTATCTCATAGTCA+AGG | + | chr6_4:7250693-7250712 | Msa0974290:CDS | 35.0% | |
| ATATTCAACTTCGCTCAAAG+CGG | + | chr6_4:7250731-7250750 | Msa0974290:CDS | 35.0% | |
| ATGTATTCCAATGGTAAGGT+TGG | + | chr6_4:7250795-7250814 | Msa0974290:CDS | 35.0% | |
| ATGAAAATGAGGCAAAGACA+TGG | + | chr6_4:7250838-7250857 | Msa0974290:CDS | 35.0% | |
| GACATGGTCTAATATGATTG+AGG | + | chr6_4:7250854-7250873 | Msa0974290:CDS | 35.0% | |
| ! | GGATTCTTGGCAATAGATTT+TGG | - | chr6_4:7250888-7250907 | None:intergenic | 35.0% |
| TGTTGTTGTGATTGGATTCT+TGG | - | chr6_4:7250901-7250920 | None:intergenic | 35.0% | |
| TCATCATTCTCCATGAAACT+AGG | - | chr6_4:7251056-7251075 | None:intergenic | 35.0% | |
| AGTTTCATGGAGAATGATGA+TGG | + | chr6_4:7251056-7251075 | Msa0974290:CDS | 35.0% | |
| ! | GTATTTTACAAGCCTACGTA+TGG | + | chr6_4:7251322-7251341 | Msa0974290:CDS | 35.0% |
| ! | AAGTTTTTCTCACCATACGT+AGG | - | chr6_4:7251337-7251356 | None:intergenic | 35.0% |
| ATGAGGATTGTTGCAAAGTT+AGG | + | chr6_4:7251357-7251376 | Msa0974290:CDS | 35.0% | |
| !! | TTTTGAAAGGATTGGGCATA+AGG | + | chr6_4:7251384-7251403 | Msa0974290:CDS | 35.0% |
| TTTGAAAGGATTGGGCATAA+GGG | + | chr6_4:7251385-7251404 | Msa0974290:CDS | 35.0% | |
| AGAGATGTGTCAATGCATTT+AGG | + | chr6_4:7251416-7251435 | Msa0974290:CDS | 35.0% | |
| CTCAAAGAGTTACTTAGTGA+AGG | + | chr6_4:7251452-7251471 | Msa0974290:CDS | 35.0% | |
| TTACTTAGTGAAGGGAACTA+TGG | + | chr6_4:7251461-7251480 | Msa0974290:CDS | 35.0% | |
| GGATTACCAAAGGTCTTTAT+TGG | + | chr6_4:7251491-7251510 | Msa0974290:CDS | 35.0% | |
| TACCAAAGGTCTTTATTGGA+AGG | + | chr6_4:7251495-7251514 | Msa0974290:CDS | 35.0% | |
| TTCCTTCCAATAAAGACCTT+TGG | - | chr6_4:7251500-7251519 | None:intergenic | 35.0% | |
| ATTGGAAGGAAATACATTGG+TGG | + | chr6_4:7251509-7251528 | Msa0974290:CDS | 35.0% | |
| ! | GAAAGGATTGATGACATTGA+AGG | + | chr6_4:7251593-7251612 | Msa0974290:CDS | 35.0% |
| TGAAGAAGATGATGATTGTG+AGG | + | chr6_4:7251709-7251728 | Msa0974290:CDS | 35.0% | |
| TGTCCTCATTGCAATGAAAA+TGG | + | chr6_4:7251755-7251774 | Msa0974290:CDS | 35.0% | |
| ! | AGTCCATTTTCATTGCAATG+AGG | - | chr6_4:7251761-7251780 | None:intergenic | 35.0% |
| ! | ATGACAATATCCCTTTTGCT+TGG | - | chr6_4:7250553-7250572 | None:intergenic | 35.0% |
| ! | TTCTAGAGACAGAGCAATAA+GGG | - | chr6_4:7250584-7250603 | None:intergenic | 35.0% |
| GCTTTGACATCAACAACATT+AGG | + | chr6_4:7250663-7250682 | Msa0974290:CDS | 35.0% | |
| GAACTTGTATCTCATAGTCA+AGG | + | chr6_4:7250693-7250712 | Msa0974290:CDS | 35.0% | |
| ATATTCAACTTCGCTCAAAG+CGG | + | chr6_4:7250731-7250750 | Msa0974290:CDS | 35.0% | |
| ATGTATTCCAATGGTAAGGT+TGG | + | chr6_4:7250795-7250814 | Msa0974290:CDS | 35.0% | |
| ATGAAAATGAGGCAAAGACA+TGG | + | chr6_4:7250838-7250857 | Msa0974290:CDS | 35.0% | |
| GACATGGTCTAATATGATTG+AGG | + | chr6_4:7250854-7250873 | Msa0974290:CDS | 35.0% | |
| ! | GGATTCTTGGCAATAGATTT+TGG | - | chr6_4:7250888-7250907 | None:intergenic | 35.0% |
| TGTTGTTGTGATTGGATTCT+TGG | - | chr6_4:7250901-7250920 | None:intergenic | 35.0% | |
| TCATCATTCTCCATGAAACT+AGG | - | chr6_4:7251056-7251075 | None:intergenic | 35.0% | |
| AGTTTCATGGAGAATGATGA+TGG | + | chr6_4:7251056-7251075 | Msa0974290:CDS | 35.0% | |
| ! | GTATTTTACAAGCCTACGTA+TGG | + | chr6_4:7251322-7251341 | Msa0974290:CDS | 35.0% |
| ! | AAGTTTTTCTCACCATACGT+AGG | - | chr6_4:7251337-7251356 | None:intergenic | 35.0% |
| ATGAGGATTGTTGCAAAGTT+AGG | + | chr6_4:7251357-7251376 | Msa0974290:CDS | 35.0% | |
| !! | TTTTGAAAGGATTGGGCATA+AGG | + | chr6_4:7251384-7251403 | Msa0974290:CDS | 35.0% |
| TTTGAAAGGATTGGGCATAA+GGG | + | chr6_4:7251385-7251404 | Msa0974290:CDS | 35.0% | |
| AGAGATGTGTCAATGCATTT+AGG | + | chr6_4:7251416-7251435 | Msa0974290:CDS | 35.0% | |
| CTCAAAGAGTTACTTAGTGA+AGG | + | chr6_4:7251452-7251471 | Msa0974290:CDS | 35.0% | |
| TTACTTAGTGAAGGGAACTA+TGG | + | chr6_4:7251461-7251480 | Msa0974290:CDS | 35.0% | |
| GGATTACCAAAGGTCTTTAT+TGG | + | chr6_4:7251491-7251510 | Msa0974290:CDS | 35.0% | |
| TACCAAAGGTCTTTATTGGA+AGG | + | chr6_4:7251495-7251514 | Msa0974290:CDS | 35.0% | |
| TTCCTTCCAATAAAGACCTT+TGG | - | chr6_4:7251500-7251519 | None:intergenic | 35.0% | |
| ATTGGAAGGAAATACATTGG+TGG | + | chr6_4:7251509-7251528 | Msa0974290:CDS | 35.0% | |
| ! | GAAAGGATTGATGACATTGA+AGG | + | chr6_4:7251593-7251612 | Msa0974290:CDS | 35.0% |
| TGAAGAAGATGATGATTGTG+AGG | + | chr6_4:7251709-7251728 | Msa0974290:CDS | 35.0% | |
| TGTCCTCATTGCAATGAAAA+TGG | + | chr6_4:7251755-7251774 | Msa0974290:CDS | 35.0% | |
| ! | AGTCCATTTTCATTGCAATG+AGG | - | chr6_4:7251761-7251780 | None:intergenic | 35.0% |
| TTGTGTGAGTTCCAAGCAAA+AGG | + | chr6_4:7250539-7250558 | Msa0974290:CDS | 40.0% | |
| TGTGTGAGTTCCAAGCAAAA+GGG | + | chr6_4:7250540-7250559 | Msa0974290:CDS | 40.0% | |
| TCTAGAGACAGAGCAATAAG+GGG | - | chr6_4:7250583-7250602 | None:intergenic | 40.0% | |
| ! | CTTCTAGAGACAGAGCAATA+AGG | - | chr6_4:7250585-7250604 | None:intergenic | 40.0% |
| CATCATCCACCTCAAAACAA+AGG | + | chr6_4:7250621-7250640 | Msa0974290:CDS | 40.0% | |
| !!! | CTATCTCCTTTGTTTTGAGG+TGG | - | chr6_4:7250630-7250649 | None:intergenic | 40.0% |
| GTATCTCATAGTCAAGGCAA+TGG | + | chr6_4:7250699-7250718 | Msa0974290:CDS | 40.0% | |
| ! | GCTTTGAGCGAAGTTGAATA+TGG | - | chr6_4:7250732-7250751 | None:intergenic | 40.0% |
| ! | TACCTCAGAAAACGGATTTG+AGG | + | chr6_4:7250758-7250777 | Msa0974290:CDS | 40.0% |
| ! | TCAGAAAACGGATTTGAGGT+CGG | + | chr6_4:7250762-7250781 | Msa0974290:CDS | 40.0% |
| ATTCTCACCAACCTTACCAT+TGG | - | chr6_4:7250805-7250824 | None:intergenic | 40.0% | |
| !! | TCACAAGGTGTTGTTGTGAT+TGG | - | chr6_4:7250909-7250928 | None:intergenic | 40.0% |
| AATCACAACAACACCTTGTG+AGG | + | chr6_4:7250908-7250927 | Msa0974290:CDS | 40.0% | |
| TGAGGACATCATCAACACAT+GGG | + | chr6_4:7250926-7250945 | Msa0974290:CDS | 40.0% | |
| CATCAACACATGGGAACTAA+TGG | + | chr6_4:7250935-7250954 | Msa0974290:CDS | 40.0% | |
| AACACATGGGAACTAATGGA+AGG | + | chr6_4:7250939-7250958 | Msa0974290:CDS | 40.0% | |
| TCCTTCAAAGCCTAGTTTCA+TGG | + | chr6_4:7251043-7251062 | Msa0974290:CDS | 40.0% | |
| ! | TCCATGAAACTAGGCTTTGA+AGG | - | chr6_4:7251047-7251066 | None:intergenic | 40.0% |
| ! | GATTGCCACTTATGAGAAGA+AGG | + | chr6_4:7251286-7251305 | Msa0974290:CDS | 40.0% |
| AGTGAAGGGAACTATGGTAA+AGG | + | chr6_4:7251467-7251486 | Msa0974290:CDS | 40.0% | |
| TGGTAAAGGAGGATTACCAA+AGG | + | chr6_4:7251481-7251500 | Msa0974290:CDS | 40.0% | |
| GAAATACATTGGTGGAGTTG+AGG | + | chr6_4:7251517-7251536 | Msa0974290:CDS | 40.0% | |
| ! | AGGATTGATGACATTGAAGG+AGG | + | chr6_4:7251596-7251615 | Msa0974290:CDS | 40.0% |
| CTTCCATAGCATGTTTCACA+GGG | - | chr6_4:7251662-7251681 | None:intergenic | 40.0% | |
| ACTTCCATAGCATGTTTCAC+AGG | - | chr6_4:7251663-7251682 | None:intergenic | 40.0% | |
| GAAGATGATGATTGTGAGGT+TGG | + | chr6_4:7251713-7251732 | Msa0974290:CDS | 40.0% | |
| TTGTGTGAGTTCCAAGCAAA+AGG | + | chr6_4:7250539-7250558 | Msa0974290:CDS | 40.0% | |
| TGTGTGAGTTCCAAGCAAAA+GGG | + | chr6_4:7250540-7250559 | Msa0974290:CDS | 40.0% | |
| TCTAGAGACAGAGCAATAAG+GGG | - | chr6_4:7250583-7250602 | None:intergenic | 40.0% | |
| ! | CTTCTAGAGACAGAGCAATA+AGG | - | chr6_4:7250585-7250604 | None:intergenic | 40.0% |
| CATCATCCACCTCAAAACAA+AGG | + | chr6_4:7250621-7250640 | Msa0974290:CDS | 40.0% | |
| !!! | CTATCTCCTTTGTTTTGAGG+TGG | - | chr6_4:7250630-7250649 | None:intergenic | 40.0% |
| GTATCTCATAGTCAAGGCAA+TGG | + | chr6_4:7250699-7250718 | Msa0974290:CDS | 40.0% | |
| ! | GCTTTGAGCGAAGTTGAATA+TGG | - | chr6_4:7250732-7250751 | None:intergenic | 40.0% |
| ! | TACCTCAGAAAACGGATTTG+AGG | + | chr6_4:7250758-7250777 | Msa0974290:CDS | 40.0% |
| ! | TCAGAAAACGGATTTGAGGT+CGG | + | chr6_4:7250762-7250781 | Msa0974290:CDS | 40.0% |
| ATTCTCACCAACCTTACCAT+TGG | - | chr6_4:7250805-7250824 | None:intergenic | 40.0% | |
| !! | TCACAAGGTGTTGTTGTGAT+TGG | - | chr6_4:7250909-7250928 | None:intergenic | 40.0% |
| AATCACAACAACACCTTGTG+AGG | + | chr6_4:7250908-7250927 | Msa0974290:CDS | 40.0% | |
| TGAGGACATCATCAACACAT+GGG | + | chr6_4:7250926-7250945 | Msa0974290:CDS | 40.0% | |
| CATCAACACATGGGAACTAA+TGG | + | chr6_4:7250935-7250954 | Msa0974290:CDS | 40.0% | |
| AACACATGGGAACTAATGGA+AGG | + | chr6_4:7250939-7250958 | Msa0974290:CDS | 40.0% | |
| TCCTTCAAAGCCTAGTTTCA+TGG | + | chr6_4:7251043-7251062 | Msa0974290:CDS | 40.0% | |
| ! | TCCATGAAACTAGGCTTTGA+AGG | - | chr6_4:7251047-7251066 | None:intergenic | 40.0% |
| ! | GATTGCCACTTATGAGAAGA+AGG | + | chr6_4:7251286-7251305 | Msa0974290:CDS | 40.0% |
| AGTGAAGGGAACTATGGTAA+AGG | + | chr6_4:7251467-7251486 | Msa0974290:CDS | 40.0% | |
| TGGTAAAGGAGGATTACCAA+AGG | + | chr6_4:7251481-7251500 | Msa0974290:CDS | 40.0% | |
| GAAATACATTGGTGGAGTTG+AGG | + | chr6_4:7251517-7251536 | Msa0974290:CDS | 40.0% | |
| ! | AGGATTGATGACATTGAAGG+AGG | + | chr6_4:7251596-7251615 | Msa0974290:CDS | 40.0% |
| CTTCCATAGCATGTTTCACA+GGG | - | chr6_4:7251662-7251681 | None:intergenic | 40.0% | |
| ACTTCCATAGCATGTTTCAC+AGG | - | chr6_4:7251663-7251682 | None:intergenic | 40.0% | |
| GAAGATGATGATTGTGAGGT+TGG | + | chr6_4:7251713-7251732 | Msa0974290:CDS | 40.0% | |
| GCGGACAATACCTCAGAAAA+CGG | + | chr6_4:7250750-7250769 | Msa0974290:CDS | 45.0% | |
| ! | GACCTCAAATCCGTTTTCTG+AGG | - | chr6_4:7250763-7250782 | None:intergenic | 45.0% |
| ! | AACGGATTTGAGGTCGGAAA+AGG | + | chr6_4:7250768-7250787 | Msa0974290:CDS | 45.0% |
| !! | GTGTTGATGATGTCCTCACA+AGG | - | chr6_4:7250924-7250943 | None:intergenic | 45.0% |
| GTGAGGACATCATCAACACA+TGG | + | chr6_4:7250925-7250944 | Msa0974290:CDS | 45.0% | |
| CCATTGCAAGAGAAGCAAGA+GGG | + | chr6_4:7251200-7251219 | Msa0974290:CDS | 45.0% | |
| CATTGCAAGAGAAGCAAGAG+GGG | + | chr6_4:7251201-7251220 | Msa0974290:CDS | 45.0% | |
| GAAGGGAACTATGGTAAAGG+AGG | + | chr6_4:7251470-7251489 | Msa0974290:CDS | 45.0% | |
| GATGACATTGAAGGAGGTGA+TGG | + | chr6_4:7251602-7251621 | Msa0974290:CDS | 45.0% | |
| GTTCCCTGTGAAACATGCTA+TGG | + | chr6_4:7251656-7251675 | Msa0974290:CDS | 45.0% | |
| TTGGTGAGTGTGGATTCCAA+AGG | + | chr6_4:7251732-7251751 | Msa0974290:CDS | 45.0% | |
| CATTGCAATGAGGACACCTT+TGG | - | chr6_4:7251751-7251770 | None:intergenic | 45.0% | |
| GCGGACAATACCTCAGAAAA+CGG | + | chr6_4:7250750-7250769 | Msa0974290:CDS | 45.0% | |
| ! | GACCTCAAATCCGTTTTCTG+AGG | - | chr6_4:7250763-7250782 | None:intergenic | 45.0% |
| ! | AACGGATTTGAGGTCGGAAA+AGG | + | chr6_4:7250768-7250787 | Msa0974290:CDS | 45.0% |
| !! | GTGTTGATGATGTCCTCACA+AGG | - | chr6_4:7250924-7250943 | None:intergenic | 45.0% |
| GTGAGGACATCATCAACACA+TGG | + | chr6_4:7250925-7250944 | Msa0974290:CDS | 45.0% | |
| CCATTGCAAGAGAAGCAAGA+GGG | + | chr6_4:7251200-7251219 | Msa0974290:CDS | 45.0% | |
| CATTGCAAGAGAAGCAAGAG+GGG | + | chr6_4:7251201-7251220 | Msa0974290:CDS | 45.0% | |
| GAAGGGAACTATGGTAAAGG+AGG | + | chr6_4:7251470-7251489 | Msa0974290:CDS | 45.0% | |
| GATGACATTGAAGGAGGTGA+TGG | + | chr6_4:7251602-7251621 | Msa0974290:CDS | 45.0% | |
| GTTCCCTGTGAAACATGCTA+TGG | + | chr6_4:7251656-7251675 | Msa0974290:CDS | 45.0% | |
| TTGGTGAGTGTGGATTCCAA+AGG | + | chr6_4:7251732-7251751 | Msa0974290:CDS | 45.0% | |
| CATTGCAATGAGGACACCTT+TGG | - | chr6_4:7251751-7251770 | None:intergenic | 45.0% | |
| GCCATTGCAAGAGAAGCAAG+AGG | + | chr6_4:7251199-7251218 | Msa0974290:CDS | 50.0% | |
| CCCTCTTGCTTCTCTTGCAA+TGG | - | chr6_4:7251203-7251222 | None:intergenic | 50.0% | |
| ! | GACATTGAAGGAGGTGATGG+TGG | + | chr6_4:7251605-7251624 | Msa0974290:CDS | 50.0% |
| !! | GATTGTGAGGTTGGTGAGTG+TGG | + | chr6_4:7251722-7251741 | Msa0974290:CDS | 50.0% |
| GCCATTGCAAGAGAAGCAAG+AGG | + | chr6_4:7251199-7251218 | Msa0974290:CDS | 50.0% | |
| CCCTCTTGCTTCTCTTGCAA+TGG | - | chr6_4:7251203-7251222 | None:intergenic | 50.0% | |
| ! | GACATTGAAGGAGGTGATGG+TGG | + | chr6_4:7251605-7251624 | Msa0974290:CDS | 50.0% |
| !! | GATTGTGAGGTTGGTGAGTG+TGG | + | chr6_4:7251722-7251741 | Msa0974290:CDS | 50.0% |
| GCAAGAGAAGCAAGAGGGGA+TGG | + | chr6_4:7251205-7251224 | Msa0974290:CDS | 55.0% | |
| !! | AGGAGGTGATGGTGGATGTG+AGG | + | chr6_4:7251613-7251632 | Msa0974290:CDS | 55.0% |
| !! | GATGGTGGATGTGAGGCTTG+TGG | + | chr6_4:7251620-7251639 | Msa0974290:CDS | 55.0% |
| GCAAGAGAAGCAAGAGGGGA+TGG | + | chr6_4:7251205-7251224 | Msa0974290:CDS | 55.0% | |
| !! | AGGAGGTGATGGTGGATGTG+AGG | + | chr6_4:7251613-7251632 | Msa0974290:CDS | 55.0% |
| !! | GATGGTGGATGTGAGGCTTG+TGG | + | chr6_4:7251620-7251639 | Msa0974290:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 7250534 | 7251808 | 7250534 | ID=Msa0974290;Name=Msa0974290 |
| chr6_4 | mRNA | 7250534 | 7251808 | 7250534 | ID=Msa0974290-mRNA-1;Parent=Msa0974290;Name=Msa0974290-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|424 |
| chr6_4 | exon | 7250534 | 7251808 | 7250534 | ID=Msa0974290-mRNA-1:exon:2839;Parent=Msa0974290-mRNA-1 |
| chr6_4 | CDS | 7250534 | 7251808 | 7250534 | ID=Msa0974290-mRNA-1:cds;Parent=Msa0974290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
