Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049330 | XP_013453701.1 | 97.436 | 117 | 3 | 0 | 1 | 117 | 126 | 242 | 9.35e-77 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049330 | sp|Q9FGD7|PUB50_ARATH | 35.514 | 107 | 52 | 2 | 11 | 117 | 118 | 207 | 1.11e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049330 | A0A072UDM8 | 97.436 | 117 | 3 | 0 | 1 | 117 | 126 | 242 | 4.47e-77 | 248 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0049330 | 0.815337 | 9.736835e-52 | -8.615850e-47 |
| Msa0015100 | Msa0049330 | 0.811868 | 5.645104e-51 | -8.615850e-47 |
| Msa0021980 | Msa0049330 | 0.842633 | 2.295186e-58 | -8.615850e-47 |
| Msa0049330 | Msa0049770 | 0.803782 | 2.957368e-49 | -8.615850e-47 |
| Msa0049330 | Msa0053960 | 0.814581 | 1.432146e-51 | -8.615850e-47 |
| Msa0049330 | Msa0064550 | 0.815175 | 1.057824e-51 | -8.615850e-47 |
| Msa0049330 | Msa0070090 | 0.816282 | 5.991942e-52 | -8.615850e-47 |
| Msa0049330 | Msa0072830 | 0.807201 | 5.673263e-50 | -8.615850e-47 |
| Msa0049330 | Msa0072860 | 0.814359 | 1.603820e-51 | -8.615850e-47 |
| Msa0049330 | Msa0089080 | -0.837050 | 6.531055e-57 | -8.615850e-47 |
| Msa0049330 | Msa0093440 | 0.803997 | 2.668445e-49 | -8.615850e-47 |
| Msa0049330 | Msa0096020 | 0.800326 | 1.518837e-48 | -8.615850e-47 |
| Msa0049330 | Msa0096510 | 0.801939 | 7.107110e-49 | -8.615850e-47 |
| Msa0049330 | Msa0101060 | 0.803395 | 3.557568e-49 | -8.615850e-47 |
| Msa0049330 | Msa0104360 | 0.842513 | 2.469705e-58 | -8.615850e-47 |
| Msa0049330 | Msa0104390 | 0.804859 | 1.764601e-49 | -8.615850e-47 |
| Msa0049330 | Msa0109490 | 0.823063 | 1.694800e-53 | -8.615850e-47 |
| Msa0049330 | Msa0117300 | 0.807142 | 5.840429e-50 | -8.615850e-47 |
| Msa0049330 | Msa0131090 | 0.817227 | 3.677690e-52 | -8.615850e-47 |
| Msa0049330 | Msa0135890 | -0.825936 | 3.571905e-54 | -8.615850e-47 |
| Msa0049330 | Msa0154240 | 0.801528 | 8.630586e-49 | -8.615850e-47 |
| Msa0049330 | Msa0169960 | 0.819902 | 9.100359e-53 | -8.615850e-47 |
| Msa0049330 | Msa0178350 | 0.824070 | 9.852594e-54 | -8.615850e-47 |
| Msa0049330 | Msa0181410 | 0.812348 | 4.435611e-51 | -8.615850e-47 |
| Msa0049330 | Msa0184330 | 0.816606 | 5.071870e-52 | -8.615850e-47 |
| Msa0049330 | Msa0188500 | 0.847316 | 1.249404e-59 | -8.615850e-47 |
| Msa0049330 | Msa0198440 | 0.870179 | 1.774739e-66 | -8.615850e-47 |
| Msa0049330 | Msa0200840 | 0.804817 | 1.800439e-49 | -8.615850e-47 |
| Msa0049330 | Msa0200870 | 0.821013 | 5.059052e-53 | -8.615850e-47 |
| Msa0049330 | Msa0216550 | 0.814419 | 1.555791e-51 | -8.615850e-47 |
| Msa0049330 | Msa0223380 | 0.810694 | 1.014595e-50 | -8.615850e-47 |
| Msa0049330 | Msa0224370 | 0.810878 | 9.260767e-51 | -8.615850e-47 |
| Msa0049330 | Msa0225880 | 0.836173 | 1.093048e-56 | -8.615850e-47 |
| Msa0049330 | Msa0240780 | 0.836270 | 1.032292e-56 | -8.615850e-47 |
| Msa0049330 | Msa0243470 | 0.823442 | 1.381824e-53 | -8.615850e-47 |
| Msa0049330 | Msa0251150 | 0.806758 | 7.039790e-50 | -8.615850e-47 |
| Msa0049330 | Msa0256410 | 0.803215 | 3.877202e-49 | -8.615850e-47 |
| Msa0049330 | Msa0260470 | 0.847959 | 8.310779e-60 | -8.615850e-47 |
| Msa0049330 | Msa0264940 | -0.833952 | 3.967341e-56 | -8.615850e-47 |
| Msa0049330 | Msa0265210 | 0.806992 | 6.282941e-50 | -8.615850e-47 |
| Msa0049330 | Msa0265980 | -0.821638 | 3.630355e-53 | -8.615850e-47 |
| Msa0049330 | Msa0270460 | 0.803404 | 3.542890e-49 | -8.615850e-47 |
| Msa0049330 | Msa0278670 | 0.872560 | 2.895063e-67 | -8.615850e-47 |
| Msa0049330 | Msa0281940 | 0.811923 | 5.490141e-51 | -8.615850e-47 |
| Msa0049330 | Msa0295850 | 0.819105 | 1.383102e-52 | -8.615850e-47 |
| Msa0049330 | Msa0302990 | -0.839346 | 1.673677e-57 | -8.615850e-47 |
| Msa0049330 | Msa0303200 | 0.815263 | 1.011193e-51 | -8.615850e-47 |
| Msa0049330 | Msa0304110 | 0.844545 | 7.075740e-59 | -8.615850e-47 |
| Msa0049330 | Msa0316750 | 0.806961 | 6.379288e-50 | -8.615850e-47 |
| Msa0049330 | Msa0318070 | 0.863893 | 1.798540e-64 | -8.615850e-47 |
| Msa0049330 | Msa0323630 | 0.805957 | 1.038445e-49 | -8.615850e-47 |
| Msa0049330 | Msa0327860 | 0.832279 | 1.035178e-55 | -8.615850e-47 |
| Msa0049330 | Msa0330400 | 0.811393 | 7.161585e-51 | -8.615850e-47 |
| Msa0049330 | Msa0336270 | 0.806089 | 9.745088e-50 | -8.615850e-47 |
| Msa0049330 | Msa0339560 | 0.815753 | 7.867644e-52 | -8.615850e-47 |
| Msa0049330 | Msa0341190 | 0.848455 | 6.063652e-60 | -8.615850e-47 |
| Msa0049330 | Msa0362430 | 0.829223 | 5.805172e-55 | -8.615850e-47 |
| Msa0049330 | Msa0363460 | 0.815217 | 1.035162e-51 | -8.615850e-47 |
| Msa0049330 | Msa0366470 | 0.803882 | 2.819726e-49 | -8.615850e-47 |
| Msa0049330 | Msa0377280 | 0.814645 | 1.386162e-51 | -8.615850e-47 |
| Msa0049330 | Msa0378670 | 0.839391 | 1.629538e-57 | -8.615850e-47 |
| Msa0049330 | Msa0378700 | 0.842135 | 3.110937e-58 | -8.615850e-47 |
| Msa0049330 | Msa0379340 | -0.807175 | 5.747192e-50 | -8.615850e-47 |
| Msa0049330 | Msa0389050 | 0.836626 | 8.380264e-57 | -8.615850e-47 |
| Msa0049330 | Msa0404690 | 0.833799 | 4.332893e-56 | -8.615850e-47 |
| Msa0049330 | Msa0411000 | 0.831083 | 2.041292e-55 | -8.615850e-47 |
| Msa0049330 | Msa0414070 | 0.829589 | 4.731516e-55 | -8.615850e-47 |
| Msa0049330 | Msa0419620 | -0.802732 | 4.880231e-49 | -8.615850e-47 |
| Msa0049330 | Msa0421390 | 0.804844 | 1.777553e-49 | -8.615850e-47 |
| Msa0049330 | Msa0428850 | -0.813922 | 2.002956e-51 | -8.615850e-47 |
| Msa0049330 | Msa0431250 | 0.801062 | 1.074888e-48 | -8.615850e-47 |
| Msa0049330 | Msa0437330 | 0.841105 | 5.812701e-58 | -8.615850e-47 |
| Msa0049330 | Msa0448120 | 0.804617 | 1.982467e-49 | -8.615850e-47 |
| Msa0049330 | Msa0454940 | 0.842583 | 2.367164e-58 | -8.615850e-47 |
| Msa0049330 | Msa0455230 | 0.818101 | 2.336444e-52 | -8.615850e-47 |
| Msa0049330 | Msa0459120 | 0.826168 | 3.145963e-54 | -8.615850e-47 |
| Msa0049330 | Msa0462190 | 0.806026 | 1.004617e-49 | -8.615850e-47 |
| Msa0049330 | Msa0462590 | 0.806361 | 8.540631e-50 | -8.615850e-47 |
| Msa0049330 | Msa0479030 | 0.802973 | 4.350058e-49 | -8.615850e-47 |
| Msa0049330 | Msa0484250 | 0.812113 | 4.992848e-51 | -8.615850e-47 |
| Msa0049330 | Msa0501470 | 0.823994 | 1.026363e-53 | -8.615850e-47 |
| Msa0049330 | Msa0502910 | 0.829230 | 5.782925e-55 | -8.615850e-47 |
| Msa0049330 | Msa0505660 | 0.811263 | 7.638995e-51 | -8.615850e-47 |
| Msa0049330 | Msa0520810 | 0.800415 | 1.456586e-48 | -8.615850e-47 |
| Msa0049330 | Msa0527250 | 0.801958 | 7.043721e-49 | -8.615850e-47 |
| Msa0049330 | Msa0543900 | 0.821194 | 4.595893e-53 | -8.615850e-47 |
| Msa0049330 | Msa0544930 | 0.803581 | 3.256584e-49 | -8.615850e-47 |
| Msa0049330 | Msa0545230 | 0.838692 | 2.472060e-57 | -8.615850e-47 |
| Msa0049330 | Msa0549740 | 0.811313 | 7.453010e-51 | -8.615850e-47 |
| Msa0049330 | Msa0560370 | 0.807038 | 6.144791e-50 | -8.615850e-47 |
| Msa0049330 | Msa0563140 | 0.823537 | 1.312928e-53 | -8.615850e-47 |
| Msa0049330 | Msa0566010 | 0.821184 | 4.619655e-53 | -8.615850e-47 |
| Msa0049330 | Msa0599770 | 0.806235 | 9.075488e-50 | -8.615850e-47 |
| Msa0049330 | Msa0600820 | 0.841346 | 5.025269e-58 | -8.615850e-47 |
| Msa0049330 | Msa0617370 | 0.830509 | 2.821871e-55 | -8.615850e-47 |
| Msa0049330 | Msa0639030 | 0.850439 | 1.697154e-60 | -8.615850e-47 |
| Msa0049330 | Msa0640380 | 0.828686 | 7.830507e-55 | -8.615850e-47 |
| Msa0049330 | Msa0641020 | 0.809043 | 2.299917e-50 | -8.615850e-47 |
| Msa0049330 | Msa0643020 | -0.802342 | 5.872261e-49 | -8.615850e-47 |
| Msa0049330 | Msa0656270 | 0.811723 | 6.071643e-51 | -8.615850e-47 |
| Msa0049330 | Msa0661890 | 0.818467 | 1.930457e-52 | -8.615850e-47 |
| Msa0049330 | Msa0663330 | 0.800358 | 1.496258e-48 | -8.615850e-47 |
| Msa0049330 | Msa0664020 | 0.805362 | 1.384658e-49 | -8.615850e-47 |
| Msa0049330 | Msa0672810 | 0.803448 | 3.469066e-49 | -8.615850e-47 |
| Msa0049330 | Msa0672850 | 0.820796 | 5.677007e-53 | -8.615850e-47 |
| Msa0049330 | Msa0678820 | 0.803323 | 3.682142e-49 | -8.615850e-47 |
| Msa0049330 | Msa0679780 | 0.833766 | 4.415872e-56 | -8.615850e-47 |
| Msa0049330 | Msa0682730 | -0.806441 | 8.212889e-50 | -8.615850e-47 |
| Msa0049330 | Msa0693400 | 0.813013 | 3.172695e-51 | -8.615850e-47 |
| Msa0049330 | Msa0697600 | 0.858453 | 8.152381e-63 | -8.615850e-47 |
| Msa0049330 | Msa0718920 | 0.803625 | 3.187651e-49 | -8.615850e-47 |
| Msa0049330 | Msa0722930 | 0.840904 | 6.563097e-58 | -8.615850e-47 |
| Msa0049330 | Msa0723140 | 0.851282 | 9.825195e-61 | -8.615850e-47 |
| Msa0049330 | Msa0726610 | 0.820342 | 7.217091e-53 | -8.615850e-47 |
| Msa0049330 | Msa0727300 | 0.822902 | 1.847744e-53 | -8.615850e-47 |
| Msa0049330 | Msa0734760 | 0.812951 | 3.274500e-51 | -8.615850e-47 |
| Msa0049330 | Msa0739610 | 0.802040 | 6.776054e-49 | -8.615850e-47 |
| Msa0049330 | Msa0748980 | 0.812776 | 3.575381e-51 | -8.615850e-47 |
| Msa0049330 | Msa0750380 | 0.800466 | 1.422149e-48 | -8.615850e-47 |
| Msa0049330 | Msa0752580 | 0.806911 | 6.536340e-50 | -8.615850e-47 |
| Msa0049330 | Msa0756410 | 0.816774 | 4.650982e-52 | -8.615850e-47 |
| Msa0049330 | Msa0773290 | 0.810799 | 9.630932e-51 | -8.615850e-47 |
| Msa0049330 | Msa0778580 | 0.807465 | 4.989271e-50 | -8.615850e-47 |
| Msa0049330 | Msa0789300 | 0.800242 | 1.579574e-48 | -8.615850e-47 |
| Msa0049330 | Msa0799290 | -0.803145 | 4.008157e-49 | -8.615850e-47 |
| Msa0049330 | Msa0812970 | 0.802953 | 4.392215e-49 | -8.615850e-47 |
| Msa0049330 | Msa0813630 | 0.802229 | 6.194534e-49 | -8.615850e-47 |
| Msa0049330 | Msa0815950 | 0.815240 | 1.022827e-51 | -8.615850e-47 |
| Msa0049330 | Msa0819670 | 0.816922 | 4.307409e-52 | -8.615850e-47 |
| Msa0049330 | Msa0828570 | 0.825300 | 5.054333e-54 | -8.615850e-47 |
| Msa0049330 | Msa0830720 | 0.802583 | 5.238166e-49 | -8.615850e-47 |
| Msa0049330 | Msa0835550 | 0.820444 | 6.837722e-53 | -8.615850e-47 |
| Msa0049330 | Msa0837510 | -0.806424 | 8.280971e-50 | -8.615850e-47 |
| Msa0049330 | Msa0841420 | 0.804374 | 2.227700e-49 | -8.615850e-47 |
| Msa0049330 | Msa0843280 | 0.830443 | 2.928234e-55 | -8.615850e-47 |
| Msa0049330 | Msa0847200 | 0.819201 | 1.315019e-52 | -8.615850e-47 |
| Msa0049330 | Msa0861480 | 0.804707 | 1.898361e-49 | -8.615850e-47 |
| Msa0049330 | Msa0861560 | 0.821582 | 3.740261e-53 | -8.615850e-47 |
| Msa0049330 | Msa0871310 | 0.808859 | 2.518041e-50 | -8.615850e-47 |
| Msa0049330 | Msa0883350 | 0.827922 | 1.196711e-54 | -8.615850e-47 |
| Msa0049330 | Msa0883390 | 0.808894 | 2.474349e-50 | -8.615850e-47 |
| Msa0049330 | Msa0883410 | 0.838137 | 3.438228e-57 | -8.615850e-47 |
| Msa0049330 | Msa0883430 | 0.816629 | 5.012302e-52 | -8.615850e-47 |
| Msa0049330 | Msa0883450 | 0.803254 | 3.806347e-49 | -8.615850e-47 |
| Msa0049330 | Msa0883660 | 0.858641 | 7.166455e-63 | -8.615850e-47 |
| Msa0049330 | Msa0883670 | 0.841079 | 5.905032e-58 | -8.615850e-47 |
| Msa0049330 | Msa0887000 | 0.840079 | 1.079301e-57 | -8.615850e-47 |
| Msa0049330 | Msa0887070 | 0.809473 | 1.860056e-50 | -8.615850e-47 |
| Msa0049330 | Msa0899700 | 0.818546 | 1.852249e-52 | -8.615850e-47 |
| Msa0049330 | Msa0899730 | 0.805420 | 1.346235e-49 | -8.615850e-47 |
| Msa0049330 | Msa0934830 | 0.800878 | 1.172022e-48 | -8.615850e-47 |
| Msa0049330 | Msa0938420 | 0.807525 | 4.843731e-50 | -8.615850e-47 |
| Msa0049330 | Msa0946300 | 0.805855 | 1.091236e-49 | -8.615850e-47 |
| Msa0049330 | Msa0950410 | 0.837936 | 3.872357e-57 | -8.615850e-47 |
| Msa0049330 | Msa0951720 | 0.821596 | 3.712208e-53 | -8.615850e-47 |
| Msa0049330 | Msa0964680 | 0.833935 | 4.006349e-56 | -8.615850e-47 |
| Msa0049330 | Msa0975560 | 0.803346 | 3.642102e-49 | -8.615850e-47 |
| Msa0049330 | Msa0984000 | 0.800990 | 1.112075e-48 | -8.615850e-47 |
| Msa0049330 | Msa0984840 | 0.813593 | 2.366873e-51 | -8.615850e-47 |
| Msa0049330 | Msa0984850 | 0.827095 | 1.889806e-54 | -8.615850e-47 |
| Msa0049330 | Msa0984860 | 0.829325 | 5.484196e-55 | -8.615850e-47 |
| Msa0049330 | Msa0988500 | 0.820273 | 7.482062e-53 | -8.615850e-47 |
| Msa0049330 | Msa0999590 | 0.812426 | 4.264788e-51 | -8.615850e-47 |
| Msa0049330 | Msa1012520 | -0.822194 | 2.698933e-53 | -8.615850e-47 |
| Msa0049330 | Msa1012920 | 0.805870 | 1.083284e-49 | -8.615850e-47 |
| Msa0049330 | Msa1016110 | 0.821106 | 4.815052e-53 | -8.615850e-47 |
| Msa0049330 | Msa1040730 | -0.824573 | 7.501995e-54 | -8.615850e-47 |
| Msa0049330 | Msa1049950 | 0.803881 | 2.820418e-49 | -8.615850e-47 |
| Msa0049330 | Msa1052030 | 0.810740 | 9.918502e-51 | -8.615850e-47 |
| Msa0049330 | Msa1053990 | -0.835358 | 1.757562e-56 | -8.615850e-47 |
| Msa0049330 | Msa1054410 | 0.800268 | 1.560767e-48 | -8.615850e-47 |
| Msa0049330 | Msa1071310 | 0.806061 | 9.876802e-50 | -8.615850e-47 |
| Msa0049330 | Msa1080790 | 0.812150 | 4.900556e-51 | -8.615850e-47 |
| Msa0049330 | Msa1096510 | 0.816487 | 5.392594e-52 | -8.615850e-47 |
| Msa0049330 | Msa1096520 | 0.806100 | 9.689531e-50 | -8.615850e-47 |
| Msa0049330 | Msa1102180 | 0.805554 | 1.262033e-49 | -8.615850e-47 |
| Msa0049330 | Msa1105270 | 0.806284 | 8.866114e-50 | -8.615850e-47 |
| Msa0049330 | Msa1108540 | -0.833859 | 4.186179e-56 | -8.615850e-47 |
| Msa0049330 | Msa1113210 | 0.807390 | 5.175458e-50 | -8.615850e-47 |
| Msa0049330 | Msa1118930 | 0.810009 | 1.426513e-50 | -8.615850e-47 |
| Msa0049330 | Msa1125450 | 0.805006 | 1.643913e-49 | -8.615850e-47 |
| Msa0049330 | Msa1130350 | 0.829113 | 6.171176e-55 | -8.615850e-47 |
| Msa0049330 | Msa1130630 | 0.839687 | 1.364818e-57 | -8.615850e-47 |
| Msa0049330 | Msa1130650 | 0.802645 | 5.085955e-49 | -8.615850e-47 |
| Msa0049330 | Msa1141250 | -0.861240 | 1.178714e-63 | -8.615850e-47 |
| Msa0049330 | Msa1152290 | -0.819504 | 1.122009e-52 | -8.615850e-47 |
| Msa0049330 | Msa1157020 | 0.820745 | 5.831726e-53 | -8.615850e-47 |
| Msa0049330 | Msa1164570 | 0.801878 | 7.315709e-49 | -8.615850e-47 |
| Msa0049330 | Msa1169300 | -0.800499 | 1.400466e-48 | -8.615850e-47 |
| Msa0049330 | Msa1169330 | -0.809034 | 2.309932e-50 | -8.615850e-47 |
| Msa0049330 | Msa1172360 | 0.835577 | 1.547952e-56 | -8.615850e-47 |
| Msa0049330 | Msa1182830 | 0.833010 | 6.816589e-56 | -8.615850e-47 |
| Msa0049330 | Msa1188820 | 0.800706 | 1.270653e-48 | -8.615850e-47 |
| Msa0049330 | Msa1191390 | 0.833978 | 3.909570e-56 | -8.615850e-47 |
| Msa0049330 | Msa1204430 | 0.802326 | 5.914911e-49 | -8.615850e-47 |
| Msa0049330 | Msa1207480 | -0.801976 | 6.982110e-49 | -8.615850e-47 |
| Msa0049330 | Msa1208710 | 0.802774 | 4.783336e-49 | -8.615850e-47 |
| Msa0049330 | Msa1208810 | 0.834762 | 2.484685e-56 | -8.615850e-47 |
| Msa0049330 | Msa1209790 | 0.811871 | 5.636542e-51 | -8.615850e-47 |
| Msa0049330 | Msa1211300 | 0.804468 | 2.128799e-49 | -8.615850e-47 |
| Msa0049330 | Msa1211390 | 0.862784 | 3.964072e-64 | -8.615850e-47 |
| Msa0049330 | Msa1212740 | 0.837393 | 5.338704e-57 | -8.615850e-47 |
| Msa0049330 | Msa1212960 | 0.808539 | 2.946797e-50 | -8.615850e-47 |
| Msa0049330 | Msa1237260 | 0.870991 | 9.599431e-67 | -8.615850e-47 |
| Msa0049330 | Msa1238370 | 0.822260 | 2.604793e-53 | -8.615850e-47 |
| Msa0049330 | Msa1242990 | 0.808459 | 3.065804e-50 | -8.615850e-47 |
| Msa0049330 | Msa1244710 | 0.812872 | 3.406905e-51 | -8.615850e-47 |
| Msa0049330 | Msa1248220 | 0.806836 | 6.779782e-50 | -8.615850e-47 |
| Msa0049330 | Msa1252070 | 0.807554 | 4.776109e-50 | -8.615850e-47 |
| Msa0049330 | Msa1255520 | 0.816045 | 6.769185e-52 | -8.615850e-47 |
| Msa0049330 | Msa1258950 | 0.800112 | 1.679219e-48 | -8.615850e-47 |
| Msa0049330 | Msa1259010 | 0.825352 | 4.912442e-54 | -8.615850e-47 |
| Msa0049330 | Msa1272130 | 0.817805 | 2.725945e-52 | -8.615850e-47 |
| Msa0049330 | Msa1278420 | 0.819547 | 1.096801e-52 | -8.615850e-47 |
| Msa0049330 | Msa1279870 | 0.814551 | 1.454657e-51 | -8.615850e-47 |
| Msa0049330 | Msa1282210 | 0.818770 | 1.648445e-52 | -8.615850e-47 |
| Msa0049330 | Msa1284390 | 0.807259 | 5.517470e-50 | -8.615850e-47 |
| Msa0049330 | Msa1306700 | 0.813006 | 3.183941e-51 | -8.615850e-47 |
| Msa0049330 | Msa1317710 | 0.834293 | 3.258453e-56 | -8.615850e-47 |
| Msa0049330 | Msa1326400 | 0.832664 | 8.307863e-56 | -8.615850e-47 |
| Msa0049330 | Msa1328600 | 0.815451 | 9.184906e-52 | -8.615850e-47 |
| Msa0049330 | Msa1331610 | 0.800208 | 1.605606e-48 | -8.615850e-47 |
| Msa0049330 | Msa1335720 | 0.805245 | 1.465211e-49 | -8.615850e-47 |
| Msa0049330 | Msa1335970 | -0.826410 | 2.754859e-54 | -8.615850e-47 |
| Msa0049330 | Msa1370630 | 0.810795 | 9.652415e-51 | -8.615850e-47 |
| Msa0049330 | Msa1371580 | 0.801410 | 9.124543e-49 | -8.615850e-47 |
| Msa0049330 | Msa1379710 | 0.803765 | 2.981851e-49 | -8.615850e-47 |
| Msa0049330 | Msa1384620 | 0.801663 | 8.094788e-49 | -8.615850e-47 |
| Msa0049330 | Msa1384980 | 0.826071 | 3.318006e-54 | -8.615850e-47 |
| Msa0049330 | Msa1386250 | 0.810767 | 9.786567e-51 | -8.615850e-47 |
| Msa0049330 | Msa1405470 | 0.827978 | 1.160691e-54 | -8.615850e-47 |
| Msa0049330 | Msa1413900 | 0.821640 | 3.626634e-53 | -8.615850e-47 |
| Msa0049330 | Msa1415270 | 0.817626 | 2.991227e-52 | -8.615850e-47 |
| Msa0049330 | Msa1419230 | 0.806595 | 7.622176e-50 | -8.615850e-47 |
| Msa0049330 | Msa1424510 | 0.965308 | 1.947547e-124 | -8.615850e-47 |
| Msa0049330 | Msa1427810 | 0.839941 | 1.172263e-57 | -8.615850e-47 |
| Msa0049330 | Msa1428440 | 0.809968 | 1.455343e-50 | -8.615850e-47 |
| Msa0049330 | Msa1431240 | 0.803896 | 2.800543e-49 | -8.615850e-47 |
| Msa0049330 | Msa1440180 | 0.801686 | 8.010946e-49 | -8.615850e-47 |
| Msa0049330 | Msa1441200 | 0.834244 | 3.353662e-56 | -8.615850e-47 |
| Msa0049330 | Msa1445250 | 0.809292 | 2.033259e-50 | -8.615850e-47 |
| Msa0049330 | Msa1449740 | 0.801401 | 9.162929e-49 | -8.615850e-47 |
| Msa0049330 | Msa1458550 | 0.825328 | 4.978400e-54 | -8.615850e-47 |
| Msa0049330 | Msa1459630 | 0.812950 | 3.275722e-51 | -8.615850e-47 |
| Msa0049330 | Msa1460310 | -0.840142 | 1.038719e-57 | -8.615850e-47 |
| Msa0049330 | Msa1463560 | -0.811937 | 5.453071e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049330 | MtrunA17_Chr5g0412171 | 97.436 | 117 | 3 | 0 | 1 | 117 | 126 | 242 | 5.97e-78 | 245 |
| Msa0049330 | MtrunA17_Chr8g0367341 | 63.115 | 122 | 40 | 1 | 1 | 117 | 127 | 248 | 1.02e-43 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0049330 | AT5G65500.2 | 34.454 | 119 | 59 | 3 | 1 | 117 | 140 | 241 | 4.01e-13 | 65.1 |
| Msa0049330 | AT5G65500.1 | 34.454 | 119 | 59 | 3 | 1 | 117 | 138 | 239 | 4.50e-13 | 65.1 |
Find 184 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGAAGCTAGAAGCTTTA+AGG | 0.201678 | 1_2:-2495455 | Msa0049330:five_prime_UTR |
| CAAGCCCAAATGCATAATTT+TGG | 0.218694 | 1_2:-2491899 | Msa0049330:three_prime_UTR |
| GAGTTTGCTATCTTTAAATT+TGG | 0.222584 | 1_2:-2494625 | Msa0049330:CDS |
| CATCACCGATGACAAATTTA+AGG | 0.244602 | 1_2:-2490461 | Msa0049330:three_prime_UTR |
| ACCTTTGCAATGCTTAGATT+TGG | 0.258933 | 1_2:+2491412 | None:intergenic |
| TGGAGAATAACAATGGAAAT+TGG | 0.280329 | 1_2:+2495648 | None:intergenic |
| TGAGGTTTCTTGGTGATATC+AGG | 0.281918 | 1_2:-2491957 | Msa0049330:three_prime_UTR |
| TTTCCTCTGTCCTATTCTTC+AGG | 0.286859 | 1_2:-2491272 | Msa0049330:intron |
| ATCTCCTTCATCAACCAATT+TGG | 0.287384 | 1_2:-2494698 | Msa0049330:CDS |
| ATGGATTTAATACTTTGAAT+TGG | 0.294818 | 1_2:-2495695 | Msa0049330:five_prime_UTR |
| TGTTACTCATAACATTTCTA+AGG | 0.295008 | 1_2:-2495625 | Msa0049330:five_prime_UTR |
| TGTGAAAATAACCTTATAAA+AGG | 0.296304 | 1_2:+2495801 | None:intergenic |
| GAAGATAGAAAGGTAATTAT+TGG | 0.301001 | 1_2:-2491337 | Msa0049330:three_prime_UTR |
| AACCGAAGTTTGCTCGGGCC+TGG | 0.306235 | 1_2:-2491788 | Msa0049330:three_prime_UTR |
| CCAATTGTAATTCCTTGTTT+AGG | 0.309790 | 1_2:+2492960 | None:intergenic |
| GTATTCCAAAATTATGCATT+TGG | 0.311697 | 1_2:+2491894 | None:intergenic |
| TGAGAGAGATAGAGGAGTTA+AGG | 0.330977 | 1_2:-2492770 | Msa0049330:three_prime_UTR |
| GGAGTTTAATTACCTTGGTT+TGG | 0.333590 | 1_2:+2492387 | None:intergenic |
| CTCTTTCCTCTTCAATTCAA+TGG | 0.339012 | 1_2:+2493772 | None:intergenic |
| GAGTCAGATTTACGGGCCTT+AGG | 0.341173 | 1_2:-2491625 | Msa0049330:three_prime_UTR |
| CCAATTTGGTTCAAAATCAA+TGG | 0.348855 | 1_2:-2494684 | Msa0049330:CDS |
| CAAAATTATGCATTTGGGCT+TGG | 0.354527 | 1_2:+2491900 | None:intergenic |
| ACCGAAGTTTGCTCGGGCCT+GGG | 0.360340 | 1_2:-2491787 | Msa0049330:three_prime_UTR |
| CCTTTGCAATGCTTAGATTT+GGG | 0.361468 | 1_2:+2491413 | None:intergenic |
| GCAATGCTTAGATTTGGGTT+GGG | 0.361773 | 1_2:+2491418 | None:intergenic |
| TATTCCAAAATTATGCATTT+GGG | 0.367280 | 1_2:+2491895 | None:intergenic |
| TGAAAATCCCATGACTAGTT+TGG | 0.368149 | 1_2:+2495077 | None:intergenic |
| TCATCATTCAAAGATCTTGC+TGG | 0.380007 | 1_2:+2495474 | None:intergenic |
| TAGCCTGAAAATTTAAATAG+AGG | 0.380748 | 1_2:-2490254 | Msa0049330:three_prime_UTR |
| AGTCAGATTTACGGGCCTTA+GGG | 0.383450 | 1_2:-2491624 | Msa0049330:three_prime_UTR |
| TGGATTTAATACTTTGAATT+GGG | 0.387053 | 1_2:-2495694 | Msa0049330:five_prime_UTR |
| TGCAATGCTTAGATTTGGGT+TGG | 0.389763 | 1_2:+2491417 | None:intergenic |
| GTAGTATATGATTTGGTGTA+AGG | 0.391330 | 1_2:+2490424 | None:intergenic |
| CGAAATGGTGAGAGAGATAG+AGG | 0.396878 | 1_2:-2492778 | Msa0049330:three_prime_UTR |
| ACAGCCATGGGCTCATCAAC+GGG | 0.399472 | 1_2:+2491559 | None:intergenic |
| AATAGAACAGTGGTTGCATT+CGG | 0.401521 | 1_2:-2490492 | Msa0049330:three_prime_UTR |
| TGAATTGGGCACTCAAGAAA+TGG | 0.408440 | 1_2:-2495680 | Msa0049330:five_prime_UTR |
| TTCTATTGCTTCCAGTTCAT+AGG | 0.410717 | 1_2:+2490508 | None:intergenic |
| CAACGTCGAGTCAGATTTAC+GGG | 0.413354 | 1_2:-2491632 | Msa0049330:three_prime_UTR |
| AAGCATTGCAAAGGTCTTAG+AGG | 0.415791 | 1_2:-2491404 | Msa0049330:three_prime_UTR |
| CAACCGCTCTGAGAAGTTAT+CGG | 0.421706 | 1_2:+2492520 | None:intergenic |
| CAACTAAATTGCGGTCTAGT+AGG | 0.422591 | 1_2:+2491704 | None:intergenic |
| CCTAAACAAGGAATTACAAT+TGG | 0.422899 | 1_2:-2492960 | Msa0049330:three_prime_UTR |
| GATCTAGCAAAAGAACTTGT+TGG | 0.425435 | 1_2:-2491475 | Msa0049330:three_prime_UTR |
| GTATGTTATCATCAATTTCA+AGG | 0.433630 | 1_2:+2495839 | None:intergenic |
| AAGAGACCAACCTGAAGAAT+AGG | 0.433645 | 1_2:+2491262 | None:intergenic |
| TGAACCAAATTGGTTGATGA+AGG | 0.434180 | 1_2:+2494694 | None:intergenic |
| CGTGTAATAAACTTGATAAC+GGG | 0.434246 | 1_2:-2495110 | Msa0049330:five_prime_UTR |
| AAGGAACGTAGTATATGATT+TGG | 0.436830 | 1_2:+2490417 | None:intergenic |
| GCAACGTCGAGTCAGATTTA+CGG | 0.450746 | 1_2:-2491633 | Msa0049330:three_prime_UTR |
| CAATGCTTAGATTTGGGTTG+GGG | 0.451263 | 1_2:+2491419 | None:intergenic |
| ATAGAACAGTGGTTGCATTC+GGG | 0.455406 | 1_2:-2490491 | Msa0049330:three_prime_UTR |
| CGTTGATGAGCCCATGGCTG+TGG | 0.455908 | 1_2:-2491557 | Msa0049330:three_prime_UTR |
| GCTCAATAAGATAAGAAGAA+AGG | 0.456926 | 1_2:-2491380 | Msa0049330:three_prime_UTR |
| ACGTGTAATAAACTTGATAA+CGG | 0.460673 | 1_2:-2495111 | Msa0049330:five_prime_UTR |
| AGCAAAAGAACTTGTTGGCC+TGG | 0.460831 | 1_2:-2491470 | Msa0049330:three_prime_UTR |
| CTCAATAAGATAAGAAGAAA+GGG | 0.463501 | 1_2:-2491379 | Msa0049330:three_prime_UTR |
| CGGTCTAGTAGGATGTGGGC+CGG | 0.467815 | 1_2:+2491715 | None:intergenic |
| CAATTTGGTTCAAAATCAAT+GGG | 0.469210 | 1_2:-2494683 | Msa0049330:CDS |
| AAATCAAAAGGTGCTATTAG+TGG | 0.471592 | 1_2:-2494940 | Msa0049330:CDS |
| CAATTAGCTTATGCAACAGC+AGG | 0.478144 | 1_2:-2493709 | Msa0049330:three_prime_UTR |
| AGTGACAACATCACGAGTAT+TGG | 0.479295 | 1_2:-2492581 | Msa0049330:three_prime_UTR |
| CATGGGCTCATCAACGGGCC+CGG | 0.480394 | 1_2:+2491564 | None:intergenic |
| TGAGCCCATGGCTGTGGGTA+TGG | 0.483937 | 1_2:-2491551 | Msa0049330:three_prime_UTR |
| AATAGCAACCGAAGTTTGCT+CGG | 0.484276 | 1_2:-2491794 | Msa0049330:three_prime_UTR |
| TTTGCTATCTTTAAATTTGG+AGG | 0.484812 | 1_2:-2494622 | Msa0049330:CDS |
| AGTTGCAAAGGAAGATAGAA+AGG | 0.486784 | 1_2:-2491347 | Msa0049330:three_prime_UTR |
| GGTTGAAGTCTGGTAGGGAT+TGG | 0.494986 | 1_2:-2492496 | Msa0049330:three_prime_UTR |
| GAGACGCACAAAAGCTGAAT+GGG | 0.496018 | 1_2:-2493732 | Msa0049330:three_prime_UTR |
| AGGAATTACCAAACTAGTCA+TGG | 0.497494 | 1_2:-2495085 | Msa0049330:exon |
| TTCTTAATTCGTCTTCGCAA+AGG | 0.503534 | 1_2:-2491762 | Msa0049330:three_prime_UTR |
| TGTTCATTGTCATTTGAGCC+CGG | 0.507719 | 1_2:-2491734 | Msa0049330:three_prime_UTR |
| TGAGACAAAGAATGAAAAGA+AGG | 0.507938 | 1_2:+2492419 | None:intergenic |
| AAAATCATGGAGGATGATAG+TGG | 0.511564 | 1_2:-2494823 | Msa0049330:CDS |
| ATTGAAGAGGAAAGAGGCTA+AGG | 0.512548 | 1_2:-2493765 | Msa0049330:three_prime_UTR |
| TGAAGATTTACTTACAAGGA+AGG | 0.515514 | 1_2:+2495045 | None:intergenic |
| AACATTCTTGATGACATGGC+TGG | 0.517729 | 1_2:-2491511 | Msa0049330:three_prime_UTR |
| CGGGCCCGTTGATGAGCCCA+TGG | 0.518119 | 1_2:-2491563 | Msa0049330:three_prime_UTR |
| TGAAGAAAGAAGGTAGAATG+AGG | 0.518772 | 1_2:-2493006 | Msa0049330:three_prime_UTR |
| TGACTGGAAGAAATTGGGCC+GGG | 0.520313 | 1_2:-2491582 | Msa0049330:three_prime_UTR |
| GATCGTGCCACCGTAAGCCT+CGG | 0.526116 | 1_2:+2491824 | None:intergenic |
| TGTCTAGATTGTGTTGGAAG+AGG | 0.526277 | 1_2:+2495773 | None:intergenic |
| CACAGCCATGGGCTCATCAA+CGG | 0.526339 | 1_2:+2491558 | None:intergenic |
| AATCCACACGTGGCAGCAGA+TGG | 0.527576 | 1_2:-2490536 | Msa0049330:three_prime_UTR |
| AATAAACTTGATAACGGGCT+AGG | 0.529744 | 1_2:-2495105 | Msa0049330:five_prime_UTR |
| TCTAAATATATTGCTTTCTG+TGG | 0.530549 | 1_2:-2495399 | Msa0049330:five_prime_UTR |
| AATTGCGGTCTAGTAGGATG+TGG | 0.531220 | 1_2:+2491710 | None:intergenic |
| TGTGAATTATTCATTATATG+TGG | 0.531381 | 1_2:-2494883 | Msa0049330:CDS |
| ATAACTTCTCAGAGCGGTTG+AGG | 0.531509 | 1_2:-2492517 | Msa0049330:three_prime_UTR |
| AGTGAGGGAGAGAAACGAAA+TGG | 0.534589 | 1_2:-2492793 | Msa0049330:three_prime_UTR |
| AAACAATGATGAGAAAATCA+TGG | 0.534816 | 1_2:-2494836 | Msa0049330:CDS |
| ACTACAGAGTTTAGCGCAAG+TGG | 0.535146 | 1_2:-2490191 | Msa0049330:three_prime_UTR |
| TACGTTCCTTCCTTGAGGAA+TGG | 0.540250 | 1_2:-2490404 | Msa0049330:three_prime_UTR |
| GATAGAAAGGTAATTATTGG+TGG | 0.540850 | 1_2:-2491334 | Msa0049330:three_prime_UTR |
| GAGCGGTTGAGGTTGAAGTC+TGG | 0.543016 | 1_2:-2492506 | Msa0049330:three_prime_UTR |
| AGAGACGCACAAAAGCTGAA+TGG | 0.543439 | 1_2:-2493733 | Msa0049330:three_prime_UTR |
| ATGAATAATTCACATAAACT+AGG | 0.545801 | 1_2:+2494892 | None:intergenic |
| GGTTGCTAAAATGAGAGATA+AGG | 0.545814 | 1_2:-2494794 | Msa0049330:CDS |
| GAAGAAAGAAGGTAGAATGA+GGG | 0.546051 | 1_2:-2493005 | Msa0049330:three_prime_UTR |
| ACCCAGGCCCGAGCAAACTT+CGG | 0.547263 | 1_2:+2491786 | None:intergenic |
| CACATATCAACCGATGTTGA+GGG | 0.547583 | 1_2:+2490222 | None:intergenic |
| ATATATTGCTTTCTGTGGCA+AGG | 0.548443 | 1_2:-2495394 | Msa0049330:intron |
| TAAAAGGAAACAAAGAATGT+TGG | 0.549247 | 1_2:+2495817 | None:intergenic |
| TTCAGCCTTAAATTTGTCAT+CGG | 0.549783 | 1_2:+2490456 | None:intergenic |
| CATACATGCCACCATTAAGA+TGG | 0.552162 | 1_2:-2493042 | Msa0049330:intron |
| AATCCATCTGCTGCCACGTG+TGG | 0.553269 | 1_2:+2490533 | None:intergenic |
| GAGGGAAGAAGTGAGTACAA+AGG | 0.554641 | 1_2:-2492987 | Msa0049330:three_prime_UTR |
| GCAAAACCATTGAATTGAAG+AGG | 0.554974 | 1_2:-2493778 | Msa0049330:three_prime_UTR |
| TCTATCCATACCCACAGCCA+TGG | 0.555856 | 1_2:+2491546 | None:intergenic |
| TTGACTGGAAGAAATTGGGC+CGG | 0.556316 | 1_2:-2491583 | Msa0049330:three_prime_UTR |
| ACAAGTAGAGAGAGCAGTGA+GGG | 0.557584 | 1_2:-2492808 | Msa0049330:three_prime_UTR |
| GATTGGACTAATGTGTATAG+AGG | 0.557964 | 1_2:-2492479 | Msa0049330:three_prime_UTR |
| CTATCTTTAAATTTGGAGGA+AGG | 0.558251 | 1_2:-2494618 | Msa0049330:CDS |
| GGTCTAGTAGGATGTGGGCC+GGG | 0.560352 | 1_2:+2491716 | None:intergenic |
| GGAGAAGAAACCGAGGCTTA+CGG | 0.561663 | 1_2:-2491834 | Msa0049330:three_prime_UTR |
| CATGGCTGGACAATGGCCAT+TGG | 0.561924 | 1_2:-2491497 | Msa0049330:three_prime_UTR |
| GGTTGAGGTTGAAGTCTGGT+AGG | 0.564678 | 1_2:-2492502 | Msa0049330:three_prime_UTR |
| CTATCCATACCCACAGCCAT+GGG | 0.565398 | 1_2:+2491547 | None:intergenic |
| GCACATATCAACCGATGTTG+AGG | 0.565773 | 1_2:+2490221 | None:intergenic |
| CATTGAATTGAAGAGGAAAG+AGG | 0.568239 | 1_2:-2493771 | Msa0049330:three_prime_UTR |
| GGGTGATGAAATAGTTGCAA+AGG | 0.569694 | 1_2:-2491359 | Msa0049330:three_prime_UTR |
| CAACATCTTAATTGCAACAG+TGG | 0.576077 | 1_2:+2492442 | None:intergenic |
| ACATCACGAGTATTGGAATG+AGG | 0.580048 | 1_2:-2492574 | Msa0049330:three_prime_UTR |
| GTTGAGGTTGAAGTCTGGTA+GGG | 0.580981 | 1_2:-2492501 | Msa0049330:three_prime_UTR |
| TTTAACTGTACAAAATCCAA+TGG | 0.581010 | 1_2:+2490330 | None:intergenic |
| ATAGCAACCGAAGTTTGCTC+GGG | 0.581448 | 1_2:-2491793 | Msa0049330:three_prime_UTR |
| GTCAGATTTACGGGCCTTAG+GGG | 0.582973 | 1_2:-2491623 | Msa0049330:three_prime_UTR |
| CAGAGTTTAGCGCAAGTGGT+TGG | 0.583598 | 1_2:-2490187 | Msa0049330:three_prime_UTR |
| TAGTATATGATTTGGTGTAA+GGG | 0.584168 | 1_2:+2490425 | None:intergenic |
| TATTGCTCTGCCATTCCTCA+AGG | 0.584811 | 1_2:+2490394 | None:intergenic |
| CAGACATGCAAATCATAGCC+AGG | 0.585976 | 1_2:+2491452 | None:intergenic |
| TACGTCGTGCATGACAATGA+TGG | 0.587303 | 1_2:-2494591 | Msa0049330:exon |
| CAGTGAGGAGGAGCTGAGGT+TGG | 0.590311 | 1_2:-2492546 | Msa0049330:three_prime_UTR |
| AGTACAGTGAGGAGGAGCTG+AGG | 0.596302 | 1_2:-2492550 | Msa0049330:three_prime_UTR |
| GGAATTACCAAACTAGTCAT+GGG | 0.596345 | 1_2:-2495084 | Msa0049330:exon |
| GTTGATGAGCCCATGGCTGT+GGG | 0.597491 | 1_2:-2491556 | Msa0049330:three_prime_UTR |
| GTTGGTGATGATGCACAAGA+TGG | 0.598957 | 1_2:-2495714 | Msa0049330:five_prime_UTR |
| GGTTAACATTCTTGATGACA+TGG | 0.599124 | 1_2:-2491515 | Msa0049330:three_prime_UTR |
| GAGAAAATCTATGTTGCTGT+TGG | 0.599266 | 1_2:-2495732 | Msa0049330:five_prime_UTR |
| CTGCATCAATAAAACCCCTA+AGG | 0.600892 | 1_2:+2491609 | None:intergenic |
| TGGAATGAGGGAGTACAGTG+AGG | 0.601213 | 1_2:-2492561 | Msa0049330:three_prime_UTR |
| TATACTACGTTCCTTCCTTG+AGG | 0.601591 | 1_2:-2490409 | Msa0049330:three_prime_UTR |
| CCCAAATCTAAGCATTGCAA+AGG | 0.603333 | 1_2:-2491413 | Msa0049330:three_prime_UTR |
| GGAGGATGATAGTGGAGCTA+TGG | 0.603346 | 1_2:-2494815 | Msa0049330:CDS |
| TGGTGGATGCATAGATAGAG+AGG | 0.607208 | 1_2:-2491317 | Msa0049330:three_prime_UTR |
| TCAAGAGTGTGACGATGACA+AGG | 0.608040 | 1_2:-2491659 | Msa0049330:three_prime_UTR |
| GCAACCACATGTAGTTGCCA+TGG | 0.608071 | 1_2:-2491935 | Msa0049330:three_prime_UTR |
| TGCAAGCAAAAGGATGCCAT+AGG | 0.608196 | 1_2:-2492714 | Msa0049330:intron |
| AGTAACATGGAGAATAACAA+TGG | 0.608771 | 1_2:+2495641 | None:intergenic |
| CATCACGAGTATTGGAATGA+GGG | 0.609466 | 1_2:-2492573 | Msa0049330:three_prime_UTR |
| TTCCAACACAATCTAGACAA+TGG | 0.614957 | 1_2:-2495769 | Msa0049330:five_prime_UTR |
| AAAATGTACCATCTTAATGG+TGG | 0.615055 | 1_2:+2493034 | None:intergenic |
| GCTCTGCCATTCCTCAAGGA+AGG | 0.626604 | 1_2:+2490398 | None:intergenic |
| GGGTATGGATAGAGAGACAT+TGG | 0.627205 | 1_2:-2491536 | Msa0049330:three_prime_UTR |
| CCCACCATGGCAACTACATG+TGG | 0.629775 | 1_2:+2491931 | None:intergenic |
| ACCACATGTAGTTGCCATGG+TGG | 0.632722 | 1_2:-2491932 | Msa0049330:three_prime_UTR |
| CCACATGTAGTTGCCATGGT+GGG | 0.636930 | 1_2:-2491931 | Msa0049330:three_prime_UTR |
| CAAGCTTCAATTGTCAACAA+TGG | 0.639351 | 1_2:-2492850 | Msa0049330:three_prime_UTR |
| ATTGCGGTCTAGTAGGATGT+GGG | 0.643307 | 1_2:+2491711 | None:intergenic |
| CTTGGAGCAGAAGCCCACCA+TGG | 0.644825 | 1_2:+2491918 | None:intergenic |
| TAATAATAGGCATGGCTGCG+AGG | 0.645075 | 1_2:-2492607 | Msa0049330:intron |
| GGTGGATGCATAGATAGAGA+GGG | 0.645207 | 1_2:-2491316 | Msa0049330:three_prime_UTR |
| ATCCATTGTCTAGATTGTGT+TGG | 0.653541 | 1_2:+2495767 | None:intergenic |
| TTGTTCAAGTCAGTGACGTG+TGG | 0.654274 | 1_2:+2494543 | None:intergenic |
| TAGAAATGTTATGAGTAACA+TGG | 0.656899 | 1_2:+2495628 | None:intergenic |
| GGACTAATGTGTATAGAGGA+CGG | 0.657331 | 1_2:-2492475 | Msa0049330:three_prime_UTR |
| GAAAGAAATTCCCTCAACAT+CGG | 0.658681 | 1_2:-2490232 | Msa0049330:three_prime_UTR |
| TTATATATTACAGGTATCAG+CGG | 0.659851 | 1_2:-2495174 | Msa0049330:intron |
| TGACTTGAACAATTCTAACA+AGG | 0.664206 | 1_2:-2494532 | Msa0049330:intron |
| AATGAGGGAGTACAGTGAGG+AGG | 0.667868 | 1_2:-2492558 | Msa0049330:three_prime_UTR |
| TACAAAGGAGAACCTAAACA+AGG | 0.669477 | 1_2:-2492972 | Msa0049330:three_prime_UTR |
| TTGATGACATGGCTGGACAA+TGG | 0.673505 | 1_2:-2491504 | Msa0049330:three_prime_UTR |
| TCAAGAGGAGTTCCAAACCA+AGG | 0.674159 | 1_2:-2492399 | Msa0049330:intron |
| ATAGGACAGAGGAAAACACT+AGG | 0.675347 | 1_2:+2491280 | None:intergenic |
| GAATTATTCATTATATGTGG+TGG | 0.678026 | 1_2:-2494880 | Msa0049330:CDS |
| CACAAGTAGAGAGAGCAGTG+AGG | 0.678663 | 1_2:-2492809 | Msa0049330:three_prime_UTR |
| AATTAGCTTATGCAACAGCA+GGG | 0.688242 | 1_2:-2493708 | Msa0049330:intron |
| AACTGGAAGCAATAGAACAG+TGG | 0.688837 | 1_2:-2490502 | Msa0049330:three_prime_UTR |
| AAGACGAATTAAGAAAACCC+AGG | 0.698118 | 1_2:+2491770 | None:intergenic |
| GAAGAAACCGAGGCTTACGG+TGG | 0.701286 | 1_2:-2491831 | Msa0049330:three_prime_UTR |
| GCTCAAATGACAATGAACAA+CGG | 0.704122 | 1_2:+2491738 | None:intergenic |
| CAACCTGAAGAATAGGACAG+AGG | 0.706747 | 1_2:+2491269 | None:intergenic |
| CAATGATGAGAAAATCATGG+AGG | 0.731529 | 1_2:-2494833 | Msa0049330:CDS |
| CGACCGATAACTTCTCAGAG+CGG | 0.746722 | 1_2:-2492523 | Msa0049330:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTAACATTAATCAA+TGG | + | chr1_2:2491580-2491599 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAATTCTAG+CGG | - | chr1_2:2491721-2491740 | Msa0049330:three_prime_UTR | 10.0% |
| !! | ATATGTAGATAAAAAATTAT+TGG | - | chr1_2:2491925-2491944 | Msa0049330:three_prime_UTR | 10.0% |
| !! | TATGTAGATAAAAAATTATT+GGG | - | chr1_2:2491926-2491945 | Msa0049330:three_prime_UTR | 10.0% |
| !!! | AATTAATACCAATATATTTT+TGG | - | chr1_2:2495689-2495708 | Msa0049330:five_prime_UTR | 10.0% |
| !!! | TTTTTCATTTCTTTGAAATA+AGG | - | chr1_2:2490744-2490763 | Msa0049330:intron | 15.0% |
| !! | TAAGGAAATCAAATTAAATA+AGG | - | chr1_2:2490762-2490781 | Msa0049330:intron | 15.0% |
| !! | TAAGTAAAAAATTAAGGAAA+AGG | + | chr1_2:2491081-2491100 | None:intergenic | 15.0% |
| !!! | TTTTCCTTAATTTTTTACTT+AGG | - | chr1_2:2491080-2491099 | Msa0049330:intron | 15.0% |
| !! | ATTTCCTAAGTAAAAAATTA+AGG | + | chr1_2:2491087-2491106 | None:intergenic | 15.0% |
| !!! | GATATTTTCATTAAAATATG+TGG | - | chr1_2:2491554-2491573 | Msa0049330:three_prime_UTR | 15.0% |
| !! | AAACAAGTTAATATTTCAAT+TGG | - | chr1_2:2492367-2492386 | Msa0049330:intron | 15.0% |
| !! | ATCCATAAAGTATATAAAAT+TGG | + | chr1_2:2492620-2492639 | None:intergenic | 15.0% |
| !!! | GATAAATTTTTTTGATGTAA+GGG | - | chr1_2:2492766-2492785 | Msa0049330:three_prime_UTR | 15.0% |
| !! | AAATTAAAGAGAAAAAACAA+AGG | - | chr1_2:2493136-2493155 | Msa0049330:intron | 15.0% |
| !! | CTAACTTTATATCTAATAAT+AGG | - | chr1_2:2493423-2493442 | Msa0049330:intron | 15.0% |
| !! | AATTGAAGCAAATATTATTA+CGG | + | chr1_2:2493917-2493936 | None:intergenic | 15.0% |
| !!! | TATTAATTTGACATTAAAGT+TGG | - | chr1_2:2495099-2495118 | Msa0049330:five_prime_UTR | 15.0% |
| !!! | ATTAATTTGACATTAAAGTT+GGG | - | chr1_2:2495100-2495119 | Msa0049330:five_prime_UTR | 15.0% |
| !! | TTCTATATTTATAACAATGT+AGG | + | chr1_2:2495399-2495418 | None:intergenic | 15.0% |
| !!! | ATTCTTTGTTTCCTTTTATA+AGG | - | chr1_2:2490231-2490250 | Msa0049330:three_prime_UTR | 20.0% |
| !! | TGTGAAAATAACCTTATAAA+AGG | + | chr1_2:2490245-2490264 | None:intergenic | 20.0% |
| !! | ATGGATTTAATACTTTGAAT+TGG | - | chr1_2:2490348-2490367 | Msa0049330:three_prime_UTR | 20.0% |
| !! | TGGATTTAATACTTTGAATT+GGG | - | chr1_2:2490349-2490368 | Msa0049330:three_prime_UTR | 20.0% |
| !! | ATTGAATTTCAAAACAAACA+AGG | + | chr1_2:2490494-2490513 | None:intergenic | 20.0% |
| !!! | ATGTTTTCTATTTTCATACA+TGG | + | chr1_2:2490813-2490832 | None:intergenic | 20.0% |
| !! | GAAGTTCAATTATATATTAC+AGG | - | chr1_2:2490860-2490879 | Msa0049330:intron | 20.0% |
| !!! | TTTTTACTTAGGAAATCAAA+AGG | - | chr1_2:2491091-2491110 | Msa0049330:intron | 20.0% |
| !! | ATGAATAATTCACATAAACT+AGG | + | chr1_2:2491154-2491173 | None:intergenic | 20.0% |
| !! | TGTGAATTATTCATTATATG+TGG | - | chr1_2:2491160-2491179 | Msa0049330:intron | 20.0% |
| !!! | ATAAGGTAACTTTTAAAGAT+TGG | - | chr1_2:2491266-2491285 | Msa0049330:intron | 20.0% |
| !! | ACCTTACAATAATGAAAAAT+TGG | - | chr1_2:2491668-2491687 | Msa0049330:three_prime_UTR | 20.0% |
| !!! | TCCAATTTTTCATTATTGTA+AGG | + | chr1_2:2491672-2491691 | None:intergenic | 20.0% |
| !! | TATCATATGAGTTGTATTTA+CGG | - | chr1_2:2491830-2491849 | Msa0049330:three_prime_UTR | 20.0% |
| !! | ATTGTTGAAAATGATAATCT+GGG | + | chr1_2:2492507-2492526 | None:intergenic | 20.0% |
| !! | AATTGTTGAAAATGATAATC+TGG | + | chr1_2:2492508-2492527 | None:intergenic | 20.0% |
| !!! | ATTTGACTGATTTCATATAT+TGG | + | chr1_2:2492560-2492579 | None:intergenic | 20.0% |
| !!! | GACCAATTTTATATACTTTA+TGG | - | chr1_2:2492615-2492634 | Msa0049330:intron | 20.0% |
| !!! | TCAATTTAGTTTAAACTATG+TGG | + | chr1_2:2492685-2492704 | None:intergenic | 20.0% |
| !!! | GTTTATTTTTGATTAAGCAT+TGG | - | chr1_2:2492707-2492726 | Msa0049330:intron | 20.0% |
| !!! | GGATAAATTTTTTTGATGTA+AGG | - | chr1_2:2492765-2492784 | Msa0049330:three_prime_UTR | 20.0% |
| !!! | TTTAAGTTAGTTAATACCTA+TGG | + | chr1_2:2493348-2493367 | None:intergenic | 20.0% |
| !! | TTTATATCTAATAATAGGCA+TGG | - | chr1_2:2493428-2493447 | Msa0049330:intron | 20.0% |
| !! | GATTTAACTAAATATTCAGT+TGG | - | chr1_2:2493939-2493958 | Msa0049330:intron | 20.0% |
| !! | AATAAACTGATATTGTATTG+TGG | + | chr1_2:2494007-2494026 | None:intergenic | 20.0% |
| !! | TAAATTCAAGCTAATAGTAA+AGG | + | chr1_2:2494044-2494063 | None:intergenic | 20.0% |
| !! | TATTCCAAAATTATGCATTT+GGG | + | chr1_2:2494151-2494170 | None:intergenic | 20.0% |
| !!! | TTTTACGTAAATAGTGATTT+TGG | - | chr1_2:2494814-2494833 | Msa0049330:CDS | 20.0% |
| !!! | CACTAGATGTTTTTATAATT+TGG | - | chr1_2:2495011-2495030 | Msa0049330:intron | 20.0% |
| !!! | ACTATATATCAACATTTTGT+TGG | - | chr1_2:2495148-2495167 | Msa0049330:five_prime_UTR | 20.0% |
| !!! | TATACATTTTGTTTGTACTT+AGG | + | chr1_2:2495297-2495316 | None:intergenic | 20.0% |
| !! | AGTGATAAGATTGTTATATA+TGG | + | chr1_2:2495331-2495350 | None:intergenic | 20.0% |
| !! | GTTAAAAAATGTTTATGACA+AGG | + | chr1_2:2495763-2495782 | None:intergenic | 20.0% |
| !!! | TTTCCTCTATTTAAATTTTC+AGG | + | chr1_2:2495795-2495814 | None:intergenic | 20.0% |
| ! | GTATGTTATCATCAATTTCA+AGG | + | chr1_2:2490207-2490226 | None:intergenic | 25.0% |
| ! | TAAAAGGAAACAAAGAATGT+TGG | + | chr1_2:2490229-2490248 | None:intergenic | 25.0% |
| ! | TAGAAATGTTATGAGTAACA+TGG | + | chr1_2:2490418-2490437 | None:intergenic | 25.0% |
| ! | TGTTACTCATAACATTTCTA+AGG | - | chr1_2:2490418-2490437 | Msa0049330:three_prime_UTR | 25.0% |
| ! | TCTAAATATATTGCTTTCTG+TGG | - | chr1_2:2490644-2490663 | Msa0049330:intron | 25.0% |
| ! | GGAAATCAAATTAAATAAGG+TGG | - | chr1_2:2490765-2490784 | Msa0049330:intron | 25.0% |
| ! | TTATATATTACAGGTATCAG+CGG | - | chr1_2:2490869-2490888 | Msa0049330:intron | 25.0% |
| !! | TTTATTACACGTTTTTGCAT+AGG | + | chr1_2:2490924-2490943 | None:intergenic | 25.0% |
| ! | ACGTGTAATAAACTTGATAA+CGG | - | chr1_2:2490932-2490951 | Msa0049330:intron | 25.0% |
| !!! | TTTTCAAGATTAAATGAGCA+AGG | + | chr1_2:2491026-2491045 | None:intergenic | 25.0% |
| ! | GAATTATTCATTATATGTGG+TGG | - | chr1_2:2491163-2491182 | Msa0049330:intron | 25.0% |
| ! | AAACAATGATGAGAAAATCA+TGG | - | chr1_2:2491207-2491226 | Msa0049330:intron | 25.0% |
| !! | CAATTTGGTTCAAAATCAAT+GGG | - | chr1_2:2491360-2491379 | Msa0049330:three_prime_UTR | 25.0% |
| !!! | GAGTTTGCTATCTTTAAATT+TGG | - | chr1_2:2491418-2491437 | Msa0049330:three_prime_UTR | 25.0% |
| !! | TTTGCTATCTTTAAATTTGG+AGG | - | chr1_2:2491421-2491440 | Msa0049330:three_prime_UTR | 25.0% |
| ! | TTGTTAGATACTTGGATAAT+TGG | - | chr1_2:2491641-2491660 | Msa0049330:three_prime_UTR | 25.0% |
| !! | ATTTTCTATACTAGAAACAC+GGG | + | chr1_2:2491795-2491814 | None:intergenic | 25.0% |
| !! | CATTTTCTATACTAGAAACA+CGG | + | chr1_2:2491796-2491815 | None:intergenic | 25.0% |
| ! | TTTATCTACATATCAAATGC+TGG | + | chr1_2:2491918-2491937 | None:intergenic | 25.0% |
| ! | AAAGACCATAAGTTCAAATT+GGG | + | chr1_2:2491953-2491972 | None:intergenic | 25.0% |
| ! | AAAAGACCATAAGTTCAAAT+TGG | + | chr1_2:2491954-2491973 | None:intergenic | 25.0% |
| !! | TTTGAACTTATGGTCTTTTT+AGG | - | chr1_2:2491955-2491974 | Msa0049330:three_prime_UTR | 25.0% |
| ! | TGAAGCTTATCAAAAAAAGA+TGG | + | chr1_2:2492019-2492038 | None:intergenic | 25.0% |
| ! | TTTGTATCCAAAAGCAAAAA+TGG | + | chr1_2:2492077-2492096 | None:intergenic | 25.0% |
| ! | AAAATGAAATGTCAAACGTT+TGG | + | chr1_2:2492112-2492131 | None:intergenic | 25.0% |
| ! | CTAAAAATGTACCATCTTAA+TGG | + | chr1_2:2493015-2493034 | None:intergenic | 25.0% |
| !! | CATTAAGATGGTACATTTTT+AGG | - | chr1_2:2493013-2493032 | Msa0049330:three_prime_UTR | 25.0% |
| ! | AATATTCCATAGATACAGAA+AGG | + | chr1_2:2493680-2493699 | None:intergenic | 25.0% |
| !! | ACTAATGACTACTACATTTT+AGG | - | chr1_2:2494063-2494082 | Msa0049330:intron | 25.0% |
| ! | GTATTCCAAAATTATGCATT+TGG | + | chr1_2:2494152-2494171 | None:intergenic | 25.0% |
| !!! | ATGCATAATTTTGGAATACA+TGG | - | chr1_2:2494153-2494172 | Msa0049330:intron | 25.0% |
| !!! | TGCATAATTTTGGAATACAT+GGG | - | chr1_2:2494154-2494173 | Msa0049330:intron | 25.0% |
| !! | TGATTTTTGCAACTAAATTG+CGG | + | chr1_2:2494351-2494370 | None:intergenic | 25.0% |
| ! | AATTTAGTTGCAAAAATCAC+AGG | - | chr1_2:2494352-2494371 | Msa0049330:intron | 25.0% |
| ! | CTCAATAAGATAAGAAGAAA+GGG | - | chr1_2:2494664-2494683 | Msa0049330:CDS | 25.0% |
| ! | GAAGATAGAAAGGTAATTAT+TGG | - | chr1_2:2494706-2494725 | Msa0049330:CDS | 25.0% |
| !! | CAACATTTTGTTGGTATTTT+TGG | - | chr1_2:2495157-2495176 | Msa0049330:five_prime_UTR | 25.0% |
| ! | ATAAAACAGTCATTCTATAG+CGG | + | chr1_2:2495233-2495252 | None:intergenic | 25.0% |
| !!! | TAGTATATGATTTGGTGTAA+GGG | + | chr1_2:2495621-2495640 | None:intergenic | 25.0% |
| ! | TTTAACTGTACAAAATCCAA+TGG | + | chr1_2:2495716-2495735 | None:intergenic | 25.0% |
| ! | TAGCCTGAAAATTTAAATAG+AGG | - | chr1_2:2495789-2495808 | Msa0049330:five_prime_UTR | 25.0% |
| TGGAGAATAACAATGGAAAT+TGG | + | chr1_2:2490398-2490417 | None:intergenic | 30.0% | |
| AGTAACATGGAGAATAACAA+TGG | + | chr1_2:2490405-2490424 | None:intergenic | 30.0% | |
| ! | TGTATTTGTGTTGTTGTAGT+TGG | - | chr1_2:2490539-2490558 | Msa0049330:three_prime_UTR | 30.0% |
| ! | GTATTTGTGTTGTTGTAGTT+GGG | - | chr1_2:2490540-2490559 | Msa0049330:three_prime_UTR | 30.0% |
| ! | CGTGTAATAAACTTGATAAC+GGG | - | chr1_2:2490933-2490952 | Msa0049330:intron | 30.0% |
| TGAAGATTTACTTACAAGGA+AGG | + | chr1_2:2491001-2491020 | None:intergenic | 30.0% | |
| GGAATGAAGATTTACTTACA+AGG | + | chr1_2:2491005-2491024 | None:intergenic | 30.0% | |
| !! | AAATCAAAAGGTGCTATTAG+TGG | - | chr1_2:2491103-2491122 | Msa0049330:intron | 30.0% |
| ! | TGGCAAACAAGTTTTTCTAA+GGG | - | chr1_2:2491183-2491202 | Msa0049330:intron | 30.0% |
| !!! | CCATTGATTTTGAACCAAAT+TGG | + | chr1_2:2491362-2491381 | None:intergenic | 30.0% |
| ! | CCAATTTGGTTCAAAATCAA+TGG | - | chr1_2:2491359-2491378 | Msa0049330:three_prime_UTR | 30.0% |
| CTATCTTTAAATTTGGAGGA+AGG | - | chr1_2:2491425-2491444 | Msa0049330:three_prime_UTR | 30.0% | |
| TGACTTGAACAATTCTAACA+AGG | - | chr1_2:2491511-2491530 | Msa0049330:three_prime_UTR | 30.0% | |
| !!! | TCTGTTTTGTTTTGCTTTGT+TGG | - | chr1_2:2491605-2491624 | Msa0049330:three_prime_UTR | 30.0% |
| !!! | TATGGTCTTTTTAGGACTTT+AGG | - | chr1_2:2491963-2491982 | Msa0049330:intron | 30.0% |
| TGATCAACAAAAACATAACG+TGG | + | chr1_2:2492177-2492196 | None:intergenic | 30.0% | |
| GTGTAACAAGTTTCAAAGAA+TGG | - | chr1_2:2492434-2492453 | Msa0049330:three_prime_UTR | 30.0% | |
| !!! | TTTTTTGATGTAAGGGATTG+AGG | - | chr1_2:2492773-2492792 | Msa0049330:three_prime_UTR | 30.0% |
| ATGACATCTAAGTATCTAAC+TGG | - | chr1_2:2492800-2492819 | Msa0049330:three_prime_UTR | 30.0% | |
| AGCAAACAATATGTCATTAG+AGG | - | chr1_2:2492926-2492945 | Msa0049330:three_prime_UTR | 30.0% | |
| !! | ATGACTCTAAAATTCACATG+TGG | + | chr1_2:2492984-2493003 | None:intergenic | 30.0% |
| AAAATGTACCATCTTAATGG+TGG | + | chr1_2:2493012-2493031 | None:intergenic | 30.0% | |
| !! | ATTTTTAGGCTGAAGAAAGA+AGG | - | chr1_2:2493027-2493046 | Msa0049330:three_prime_UTR | 30.0% |
| ! | CCAATTGTAATTCCTTGTTT+AGG | + | chr1_2:2493086-2493105 | None:intergenic | 30.0% |
| CCTAAACAAGGAATTACAAT+TGG | - | chr1_2:2493083-2493102 | Msa0049330:intron | 30.0% | |
| AAAAACAAAGGATGAGTTCA+TGG | - | chr1_2:2493148-2493167 | Msa0049330:intron | 30.0% | |
| ! | GATTGAATTTTGCAAGCAAA+AGG | - | chr1_2:2493319-2493338 | Msa0049330:intron | 30.0% |
| TGAGACAAAGAATGAAAAGA+AGG | + | chr1_2:2493627-2493646 | None:intergenic | 30.0% | |
| ! | TTTTCATTCTTTGTCTCAAG+AGG | - | chr1_2:2493629-2493648 | Msa0049330:intron | 30.0% |
| AGAAAGGAGTTTAATTACCT+TGG | + | chr1_2:2493664-2493683 | None:intergenic | 30.0% | |
| TAAACTCCTTTCTGTATCTA+TGG | - | chr1_2:2493671-2493690 | Msa0049330:intron | 30.0% | |
| GCACAACACATCATTTAAAA+AGG | + | chr1_2:2493758-2493777 | None:intergenic | 30.0% | |
| GAAAAGAATCGAATTATGAC+AGG | - | chr1_2:2493819-2493838 | Msa0049330:three_prime_UTR | 30.0% | |
| !!! | TGAACCAGCTCATTTTTTTT+CGG | - | chr1_2:2493859-2493878 | Msa0049330:intron | 30.0% |
| TAAACCGAAAAAAAATGAGC+TGG | + | chr1_2:2493866-2493885 | None:intergenic | 30.0% | |
| AACTGATATTGTATTGTGGA+GGG | + | chr1_2:2494003-2494022 | None:intergenic | 30.0% | |
| AAACTGATATTGTATTGTGG+AGG | + | chr1_2:2494004-2494023 | None:intergenic | 30.0% | |
| TTCAAGCTAATAGTAAAGGT+AGG | + | chr1_2:2494040-2494059 | None:intergenic | 30.0% | |
| !!! | TACAAGACATGTTGTTTTCT+AGG | - | chr1_2:2494188-2494207 | Msa0049330:intron | 30.0% |
| GCTCAATAAGATAAGAAGAA+AGG | - | chr1_2:2494663-2494682 | Msa0049330:CDS | 30.0% | |
| GATAGAAAGGTAATTATTGG+TGG | - | chr1_2:2494709-2494728 | Msa0049330:CDS | 30.0% | |
| TAGTGTGTATTTCTCTAGTT+TGG | + | chr1_2:2494996-2495015 | None:intergenic | 30.0% | |
| ATAAAGAGTAAGCAACCATT+GGG | + | chr1_2:2495082-2495101 | None:intergenic | 30.0% | |
| AATAAAGAGTAAGCAACCAT+TGG | + | chr1_2:2495083-2495102 | None:intergenic | 30.0% | |
| TTGACATTAAAGTTGGGATT+TGG | - | chr1_2:2495106-2495125 | Msa0049330:five_prime_UTR | 30.0% | |
| TTCAGCCTTAAATTTGTCAT+CGG | + | chr1_2:2495590-2495609 | None:intergenic | 30.0% | |
| !! | GTAGTATATGATTTGGTGTA+AGG | + | chr1_2:2495622-2495641 | None:intergenic | 30.0% |
| AAGGAACGTAGTATATGATT+TGG | + | chr1_2:2495629-2495648 | None:intergenic | 30.0% | |
| CCAATGGACCAAAAATATAT+TGG | + | chr1_2:2495700-2495719 | None:intergenic | 30.0% | |
| !!! | CCAATATATTTTTGGTCCAT+TGG | - | chr1_2:2495697-2495716 | Msa0049330:five_prime_UTR | 30.0% |
| TTCCAACACAATCTAGACAA+TGG | - | chr1_2:2490274-2490293 | Msa0049330:three_prime_UTR | 35.0% | |
| ATCCATTGTCTAGATTGTGT+TGG | + | chr1_2:2490279-2490298 | None:intergenic | 35.0% | |
| GAGAAAATCTATGTTGCTGT+TGG | - | chr1_2:2490311-2490330 | Msa0049330:three_prime_UTR | 35.0% | |
| GTCTATACACCATGTAAGTT+TGG | - | chr1_2:2490446-2490465 | Msa0049330:three_prime_UTR | 35.0% | |
| TCATCATTCAAAGATCTTGC+TGG | + | chr1_2:2490572-2490591 | None:intergenic | 35.0% | |
| ATGAGAAGCTAGAAGCTTTA+AGG | - | chr1_2:2490588-2490607 | Msa0049330:intron | 35.0% | |
| ATATATTGCTTTCTGTGGCA+AGG | - | chr1_2:2490649-2490668 | Msa0049330:intron | 35.0% | |
| !! | AATAAACTTGATAACGGGCT+AGG | - | chr1_2:2490938-2490957 | Msa0049330:intron | 35.0% |
| AGGAATTACCAAACTAGTCA+TGG | - | chr1_2:2490958-2490977 | Msa0049330:intron | 35.0% | |
| GGAATTACCAAACTAGTCAT+GGG | - | chr1_2:2490959-2490978 | Msa0049330:intron | 35.0% | |
| ! | TGAAAATCCCATGACTAGTT+TGG | + | chr1_2:2490969-2490988 | None:intergenic | 35.0% |
| ! | GTGGCAAACAAGTTTTTCTA+AGG | - | chr1_2:2491182-2491201 | Msa0049330:intron | 35.0% |
| ! | GGCAAACAAGTTTTTCTAAG+GGG | - | chr1_2:2491184-2491203 | Msa0049330:intron | 35.0% |
| CAATGATGAGAAAATCATGG+AGG | - | chr1_2:2491210-2491229 | Msa0049330:intron | 35.0% | |
| AAAATCATGGAGGATGATAG+TGG | - | chr1_2:2491220-2491239 | Msa0049330:intron | 35.0% | |
| GGTTGCTAAAATGAGAGATA+AGG | - | chr1_2:2491249-2491268 | Msa0049330:intron | 35.0% | |
| ATCTCCTTCATCAACCAATT+TGG | - | chr1_2:2491345-2491364 | Msa0049330:three_prime_UTR | 35.0% | |
| !! | TGAACCAAATTGGTTGATGA+AGG | + | chr1_2:2491352-2491371 | None:intergenic | 35.0% |
| !! | TTGCTTTGTTGGTTTGTTCT+TGG | - | chr1_2:2491616-2491635 | Msa0049330:three_prime_UTR | 35.0% |
| TCTTGGAGTTGTTAGATACT+TGG | - | chr1_2:2491633-2491652 | Msa0049330:three_prime_UTR | 35.0% | |
| TGCTTAGAATTAGGAAATCG+TGG | - | chr1_2:2491762-2491781 | Msa0049330:three_prime_UTR | 35.0% | |
| GCTTAGAATTAGGAAATCGT+GGG | - | chr1_2:2491763-2491782 | Msa0049330:three_prime_UTR | 35.0% | |
| CAAAAATGGACAGCTAATCA+CGG | + | chr1_2:2492063-2492082 | None:intergenic | 35.0% | |
| !! | TAGCTGTCCATTTTTGCTTT+TGG | - | chr1_2:2492067-2492086 | Msa0049330:intron | 35.0% |
| GCAAAACCATTGAATTGAAG+AGG | - | chr1_2:2492265-2492284 | Msa0049330:intron | 35.0% | |
| CTCTTTCCTCTTCAATTCAA+TGG | + | chr1_2:2492274-2492293 | None:intergenic | 35.0% | |
| CATTGAATTGAAGAGGAAAG+AGG | - | chr1_2:2492272-2492291 | Msa0049330:intron | 35.0% | |
| ! | AATTAGCTTATGCAACAGCA+GGG | - | chr1_2:2492335-2492354 | Msa0049330:intron | 35.0% |
| ACGGAAAACGTTACAAATTG+AGG | - | chr1_2:2492744-2492763 | Msa0049330:three_prime_UTR | 35.0% | |
| AATTCTCATGCATACACTTC+TGG | - | chr1_2:2492897-2492916 | Msa0049330:three_prime_UTR | 35.0% | |
| TGAAGAAAGAAGGTAGAATG+AGG | - | chr1_2:2493037-2493056 | Msa0049330:three_prime_UTR | 35.0% | |
| GAAGAAAGAAGGTAGAATGA+GGG | - | chr1_2:2493038-2493057 | Msa0049330:three_prime_UTR | 35.0% | |
| TACAAAGGAGAACCTAAACA+AGG | - | chr1_2:2493071-2493090 | Msa0049330:intron | 35.0% | |
| CAAGCTTCAATTGTCAACAA+TGG | - | chr1_2:2493193-2493212 | Msa0049330:intron | 35.0% | |
| GATTGGACTAATGTGTATAG+AGG | - | chr1_2:2493564-2493583 | Msa0049330:intron | 35.0% | |
| CAACATCTTAATTGCAACAG+TGG | + | chr1_2:2493604-2493623 | None:intergenic | 35.0% | |
| GGAGTTTAATTACCTTGGTT+TGG | + | chr1_2:2493659-2493678 | None:intergenic | 35.0% | |
| TGATGTGTTGTGCAAGAAAT+AGG | - | chr1_2:2493765-2493784 | Msa0049330:three_prime_UTR | 35.0% | |
| GATGTGTTGTGCAAGAAATA+GGG | - | chr1_2:2493766-2493785 | Msa0049330:three_prime_UTR | 35.0% | |
| ATGTGTTGTGCAAGAAATAG+GGG | - | chr1_2:2493767-2493786 | Msa0049330:three_prime_UTR | 35.0% | |
| ACTGATATTGTATTGTGGAG+GGG | + | chr1_2:2494002-2494021 | None:intergenic | 35.0% | |
| !! | TGACTACTACATTTTAGGTG+AGG | - | chr1_2:2494068-2494087 | Msa0049330:intron | 35.0% |
| !! | ACATTTTAGGTGAGGTTTCT+TGG | - | chr1_2:2494076-2494095 | Msa0049330:intron | 35.0% |
| CAAAATTATGCATTTGGGCT+TGG | + | chr1_2:2494146-2494165 | None:intergenic | 35.0% | |
| ! | CAAGCCCAAATGCATAATTT+TGG | - | chr1_2:2494144-2494163 | Msa0049330:intron | 35.0% |
| !!! | ATTTTGGAATACATGGGCAA+TGG | - | chr1_2:2494160-2494179 | Msa0049330:intron | 35.0% |
| AAGACGAATTAAGAAAACCC+AGG | + | chr1_2:2494276-2494295 | None:intergenic | 35.0% | |
| TTCTTAATTCGTCTTCGCAA+AGG | - | chr1_2:2494281-2494300 | Msa0049330:intron | 35.0% | |
| GCTCAAATGACAATGAACAA+CGG | + | chr1_2:2494308-2494327 | None:intergenic | 35.0% | |
| TTGCAAAAATCACAGGCTTT+GGG | - | chr1_2:2494359-2494378 | Msa0049330:intron | 35.0% | |
| ! | TTATTGATGCAGCTTTTGAC+TGG | - | chr1_2:2494445-2494464 | Msa0049330:intron | 35.0% |
| !! | AGCTTTTGACTGGAAGAAAT+TGG | - | chr1_2:2494455-2494474 | Msa0049330:intron | 35.0% |
| !! | GCTTTTGACTGGAAGAAATT+GGG | - | chr1_2:2494456-2494475 | Msa0049330:intron | 35.0% |
| ! | GGTTAACATTCTTGATGACA+TGG | - | chr1_2:2494528-2494547 | Msa0049330:intron | 35.0% |
| ! | AGTTCTTTTGCTAGATCCAA+TGG | + | chr1_2:2494565-2494584 | None:intergenic | 35.0% |
| GATCTAGCAAAAGAACTTGT+TGG | - | chr1_2:2494568-2494587 | Msa0049330:three_prime_UTR | 35.0% | |
| CCTTTGCAATGCTTAGATTT+GGG | + | chr1_2:2494633-2494652 | None:intergenic | 35.0% | |
| ACCTTTGCAATGCTTAGATT+TGG | + | chr1_2:2494634-2494653 | None:intergenic | 35.0% | |
| AGTTGCAAAGGAAGATAGAA+AGG | - | chr1_2:2494696-2494715 | Msa0049330:CDS | 35.0% | |
| GGATCTTTGACTATGTCATA+TGG | + | chr1_2:2495061-2495080 | None:intergenic | 35.0% | |
| AGTAATGAAAAATCCACACG+TGG | - | chr1_2:2495497-2495516 | Msa0049330:intron | 35.0% | |
| !! | AGATGGATTTTCCTATGAAC+TGG | - | chr1_2:2495524-2495543 | Msa0049330:intron | 35.0% |
| TTCTATTGCTTCCAGTTCAT+AGG | + | chr1_2:2495538-2495557 | None:intergenic | 35.0% | |
| AATAGAACAGTGGTTGCATT+CGG | - | chr1_2:2495551-2495570 | Msa0049330:intron | 35.0% | |
| CATCACCGATGACAAATTTA+AGG | - | chr1_2:2495582-2495601 | Msa0049330:intron | 35.0% | |
| GAAAGAAATTCCCTCAACAT+CGG | - | chr1_2:2495811-2495830 | Msa0049330:five_prime_UTR | 35.0% | |
| TGTCTAGATTGTGTTGGAAG+AGG | + | chr1_2:2490273-2490292 | None:intergenic | 40.0% | |
| TGAATTGGGCACTCAAGAAA+TGG | - | chr1_2:2490363-2490382 | Msa0049330:three_prime_UTR | 40.0% | |
| ATGCACAAGCCAAACTTACA+TGG | + | chr1_2:2490458-2490477 | None:intergenic | 40.0% | |
| ! | TACACGGAGTGCTTAGAATT+AGG | - | chr1_2:2491753-2491772 | Msa0049330:three_prime_UTR | 40.0% |
| TGGGACCCAATTTGAACTTA+TGG | - | chr1_2:2491945-2491964 | Msa0049330:three_prime_UTR | 40.0% | |
| GGACTTTAGGTCACAAAGTA+TGG | - | chr1_2:2491976-2491995 | Msa0049330:intron | 40.0% | |
| ATTGAAGAGGAAAGAGGCTA+AGG | - | chr1_2:2492278-2492297 | Msa0049330:intron | 40.0% | |
| ! | CAATTAGCTTATGCAACAGC+AGG | - | chr1_2:2492334-2492353 | Msa0049330:intron | 40.0% |
| CATACATGCCACCATTAAGA+TGG | - | chr1_2:2493001-2493020 | Msa0049330:three_prime_UTR | 40.0% | |
| TGAGAGAGATAGAGGAGTTA+AGG | - | chr1_2:2493273-2493292 | Msa0049330:intron | 40.0% | |
| AGTGACAACATCACGAGTAT+TGG | - | chr1_2:2493462-2493481 | Msa0049330:intron | 40.0% | |
| !! | ACATCACGAGTATTGGAATG+AGG | - | chr1_2:2493469-2493488 | Msa0049330:intron | 40.0% |
| !! | CATCACGAGTATTGGAATGA+GGG | - | chr1_2:2493470-2493489 | Msa0049330:intron | 40.0% |
| GGACTAATGTGTATAGAGGA+CGG | - | chr1_2:2493568-2493587 | Msa0049330:intron | 40.0% | |
| AGAACACAAAGGATTCGAAG+AGG | + | chr1_2:2493706-2493725 | None:intergenic | 40.0% | |
| TCTTCGAATCCTTTGTGTTC+TGG | - | chr1_2:2493705-2493724 | Msa0049330:intron | 40.0% | |
| TATTGTATTGTGGAGGGGTT+AGG | + | chr1_2:2493997-2494016 | None:intergenic | 40.0% | |
| ! | TGAGGTTTCTTGGTGATATC+AGG | - | chr1_2:2494086-2494105 | Msa0049330:intron | 40.0% |
| !! | TTTTCTAGGAGAAGAAACCG+AGG | - | chr1_2:2494202-2494221 | Msa0049330:intron | 40.0% |
| ! | AATAGCAACCGAAGTTTGCT+CGG | - | chr1_2:2494249-2494268 | Msa0049330:intron | 40.0% |
| ! | TGTTCATTGTCATTTGAGCC+CGG | - | chr1_2:2494309-2494328 | Msa0049330:intron | 40.0% |
| CAACTAAATTGCGGTCTAGT+AGG | + | chr1_2:2494342-2494361 | None:intergenic | 40.0% | |
| GTTGCAAAAATCACAGGCTT+TGG | - | chr1_2:2494358-2494377 | Msa0049330:intron | 40.0% | |
| CTGCATCAATAAAACCCCTA+AGG | + | chr1_2:2494437-2494456 | None:intergenic | 40.0% | |
| ! | AACATTCTTGATGACATGGC+TGG | - | chr1_2:2494532-2494551 | Msa0049330:intron | 40.0% |
| !! | CAATGCTTAGATTTGGGTTG+GGG | + | chr1_2:2494627-2494646 | None:intergenic | 40.0% |
| ! | GCAATGCTTAGATTTGGGTT+GGG | + | chr1_2:2494628-2494647 | None:intergenic | 40.0% |
| TGCAATGCTTAGATTTGGGT+TGG | + | chr1_2:2494629-2494648 | None:intergenic | 40.0% | |
| ! | CCCAAATCTAAGCATTGCAA+AGG | - | chr1_2:2494630-2494649 | Msa0049330:CDS | 40.0% |
| ! | AAGCATTGCAAAGGTCTTAG+AGG | - | chr1_2:2494639-2494658 | Msa0049330:CDS | 40.0% |
| GGGTGATGAAATAGTTGCAA+AGG | - | chr1_2:2494684-2494703 | Msa0049330:CDS | 40.0% | |
| ATAGGACAGAGGAAAACACT+AGG | + | chr1_2:2494766-2494785 | None:intergenic | 40.0% | |
| TTTCCTCTGTCCTATTCTTC+AGG | - | chr1_2:2494771-2494790 | Msa0049330:CDS | 40.0% | |
| AAGAGACCAACCTGAAGAAT+AGG | + | chr1_2:2494784-2494803 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTCCTAAATGTGCG+AGG | - | chr1_2:2494831-2494850 | Msa0049330:CDS | 40.0% |
| GACATAGTCAAAGATCCCAA+TGG | - | chr1_2:2495064-2495083 | Msa0049330:CDS | 40.0% | |
| CATTAAAGTTGGGATTTGGC+AGG | - | chr1_2:2495110-2495129 | Msa0049330:five_prime_UTR | 40.0% | |
| TCTTATGATGTTGCGTGAAC+AGG | - | chr1_2:2495473-2495492 | Msa0049330:five_prime_UTR | 40.0% | |
| AACTGGAAGCAATAGAACAG+TGG | - | chr1_2:2495541-2495560 | Msa0049330:intron | 40.0% | |
| ATAGAACAGTGGTTGCATTC+GGG | - | chr1_2:2495552-2495571 | Msa0049330:intron | 40.0% | |
| TATACTACGTTCCTTCCTTG+AGG | - | chr1_2:2495634-2495653 | Msa0049330:five_prime_UTR | 40.0% | |
| CACATATCAACCGATGTTGA+GGG | + | chr1_2:2495824-2495843 | None:intergenic | 40.0% | |
| !! | GTTGGTGATGATGCACAAGA+TGG | - | chr1_2:2490329-2490348 | Msa0049330:three_prime_UTR | 45.0% |
| TACGTCGTGCATGACAATGA+TGG | - | chr1_2:2491452-2491471 | Msa0049330:three_prime_UTR | 45.0% | |
| ! | GTGACGTGTGGCTCAATTTT+TGG | + | chr1_2:2491491-2491510 | None:intergenic | 45.0% |
| TTGTTCAAGTCAGTGACGTG+TGG | + | chr1_2:2491503-2491522 | None:intergenic | 45.0% | |
| CTAGCGGCAAAACTCATACA+CGG | - | chr1_2:2491737-2491756 | Msa0049330:three_prime_UTR | 45.0% | |
| TGCTGGTAGAGTCAAAGTGT+TGG | + | chr1_2:2491901-2491920 | None:intergenic | 45.0% | |
| GGACAGCTAATCACGGATTT+AGG | + | chr1_2:2492056-2492075 | None:intergenic | 45.0% | |
| AGAGACGCACAAAAGCTGAA+TGG | - | chr1_2:2492310-2492329 | Msa0049330:intron | 45.0% | |
| GAGACGCACAAAAGCTGAAT+GGG | - | chr1_2:2492311-2492330 | Msa0049330:intron | 45.0% | |
| !! | ATTGGTGACGCAGCTAACAA+CGG | - | chr1_2:2492725-2492744 | Msa0049330:three_prime_UTR | 45.0% |
| GAGGGAAGAAGTGAGTACAA+AGG | - | chr1_2:2493056-2493075 | Msa0049330:intron | 45.0% | |
| ACAAGTAGAGAGAGCAGTGA+GGG | - | chr1_2:2493235-2493254 | Msa0049330:intron | 45.0% | |
| AGTGAGGGAGAGAAACGAAA+TGG | - | chr1_2:2493250-2493269 | Msa0049330:intron | 45.0% | |
| CGAAATGGTGAGAGAGATAG+AGG | - | chr1_2:2493265-2493284 | Msa0049330:intron | 45.0% | |
| TGCAAGCAAAAGGATGCCAT+AGG | - | chr1_2:2493329-2493348 | Msa0049330:intron | 45.0% | |
| TAATAATAGGCATGGCTGCG+AGG | - | chr1_2:2493436-2493455 | Msa0049330:intron | 45.0% | |
| !! | CAACCGCTCTGAGAAGTTAT+CGG | + | chr1_2:2493526-2493545 | None:intergenic | 45.0% |
| ATAACTTCTCAGAGCGGTTG+AGG | - | chr1_2:2493526-2493545 | Msa0049330:intron | 45.0% | |
| GTTGAGGTTGAAGTCTGGTA+GGG | - | chr1_2:2493542-2493561 | Msa0049330:intron | 45.0% | |
| TCAAGAGGAGTTCCAAACCA+AGG | - | chr1_2:2493644-2493663 | Msa0049330:intron | 45.0% | |
| GACTATGCACCAGAACACAA+AGG | + | chr1_2:2493717-2493736 | None:intergenic | 45.0% | |
| TGTTGTGCAAGAAATAGGGG+TGG | - | chr1_2:2493770-2493789 | Msa0049330:three_prime_UTR | 45.0% | |
| ! | ATAGCAACCGAAGTTTGCTC+GGG | - | chr1_2:2494250-2494269 | Msa0049330:intron | 45.0% |
| ATTGCGGTCTAGTAGGATGT+GGG | + | chr1_2:2494335-2494354 | None:intergenic | 45.0% | |
| AATTGCGGTCTAGTAGGATG+TGG | + | chr1_2:2494336-2494355 | None:intergenic | 45.0% | |
| ! | TCAAGAGTGTGACGATGACA+AGG | - | chr1_2:2494384-2494403 | Msa0049330:intron | 45.0% |
| GCAACGTCGAGTCAGATTTA+CGG | - | chr1_2:2494410-2494429 | Msa0049330:intron | 45.0% | |
| CAACGTCGAGTCAGATTTAC+GGG | - | chr1_2:2494411-2494430 | Msa0049330:intron | 45.0% | |
| AGTCAGATTTACGGGCCTTA+GGG | - | chr1_2:2494419-2494438 | Msa0049330:intron | 45.0% | |
| TTGACTGGAAGAAATTGGGC+CGG | - | chr1_2:2494460-2494479 | Msa0049330:intron | 45.0% | |
| GGGTATGGATAGAGAGACAT+TGG | - | chr1_2:2494507-2494526 | Msa0049330:intron | 45.0% | |
| ! | TTGATGACATGGCTGGACAA+TGG | - | chr1_2:2494539-2494558 | Msa0049330:three_prime_UTR | 45.0% |
| !! | AGCAAAAGAACTTGTTGGCC+TGG | - | chr1_2:2494573-2494592 | Msa0049330:three_prime_UTR | 45.0% |
| CAGACATGCAAATCATAGCC+AGG | + | chr1_2:2494594-2494613 | None:intergenic | 45.0% | |
| ! | TGGTGGATGCATAGATAGAG+AGG | - | chr1_2:2494726-2494745 | Msa0049330:CDS | 45.0% |
| GGTGGATGCATAGATAGAGA+GGG | - | chr1_2:2494727-2494746 | Msa0049330:CDS | 45.0% | |
| CAACCTGAAGAATAGGACAG+AGG | + | chr1_2:2494777-2494796 | None:intergenic | 45.0% | |
| CTCTGTCCTATTCTTCAGGT+TGG | - | chr1_2:2494775-2494794 | Msa0049330:CDS | 45.0% | |
| TACGTTCCTTCCTTGAGGAA+TGG | - | chr1_2:2495639-2495658 | Msa0049330:five_prime_UTR | 45.0% | |
| TATTGCTCTGCCATTCCTCA+AGG | + | chr1_2:2495652-2495671 | None:intergenic | 45.0% | |
| GCACATATCAACCGATGTTG+AGG | + | chr1_2:2495825-2495844 | None:intergenic | 45.0% | |
| ACTACAGAGTTTAGCGCAAG+TGG | - | chr1_2:2495852-2495871 | Msa0049330:five_prime_UTR | 45.0% | |
| !! | TTATTATATTTATAGTTTAT+AGG | + | chr1_2:2492534-2492553 | None:intergenic | 5.0% |
| !! | AAAAAAAAAATTAAAGAAAA+AGG | + | chr1_2:2495370-2495389 | None:intergenic | 5.0% |
| !! | GGAGGATGATAGTGGAGCTA+TGG | - | chr1_2:2491228-2491247 | Msa0049330:intron | 50.0% |
| CACAAGTAGAGAGAGCAGTG+AGG | - | chr1_2:2493234-2493253 | Msa0049330:intron | 50.0% | |
| ! | TGGAATGAGGGAGTACAGTG+AGG | - | chr1_2:2493482-2493501 | Msa0049330:intron | 50.0% |
| ! | AATGAGGGAGTACAGTGAGG+AGG | - | chr1_2:2493485-2493504 | Msa0049330:intron | 50.0% |
| CGACCGATAACTTCTCAGAG+CGG | - | chr1_2:2493520-2493539 | Msa0049330:intron | 50.0% | |
| GGTTGAGGTTGAAGTCTGGT+AGG | - | chr1_2:2493541-2493560 | Msa0049330:intron | 50.0% | |
| GGTTGAAGTCTGGTAGGGAT+TGG | - | chr1_2:2493547-2493566 | Msa0049330:intron | 50.0% | |
| GCAACCACATGTAGTTGCCA+TGG | - | chr1_2:2494108-2494127 | Msa0049330:intron | 50.0% | |
| ACCACATGTAGTTGCCATGG+TGG | - | chr1_2:2494111-2494130 | Msa0049330:intron | 50.0% | |
| CCACATGTAGTTGCCATGGT+GGG | - | chr1_2:2494112-2494131 | Msa0049330:intron | 50.0% | |
| GGAGAAGAAACCGAGGCTTA+CGG | - | chr1_2:2494209-2494228 | Msa0049330:intron | 50.0% | |
| GAGTCAGATTTACGGGCCTT+AGG | - | chr1_2:2494418-2494437 | Msa0049330:intron | 50.0% | |
| GTCAGATTTACGGGCCTTAG+GGG | - | chr1_2:2494420-2494439 | Msa0049330:intron | 50.0% | |
| TGACTGGAAGAAATTGGGCC+GGG | - | chr1_2:2494461-2494480 | Msa0049330:intron | 50.0% | |
| CTATCCATACCCACAGCCAT+GGG | + | chr1_2:2494499-2494518 | None:intergenic | 50.0% | |
| TCTATCCATACCCACAGCCA+TGG | + | chr1_2:2494500-2494519 | None:intergenic | 50.0% | |
| TGGTTCCTAAATGTGCGAGG+AGG | - | chr1_2:2494834-2494853 | Msa0049330:CDS | 50.0% | |
| TGACACCTCCTCGCACATTT+AGG | + | chr1_2:2494842-2494861 | None:intergenic | 50.0% | |
| CAGAGTTTAGCGCAAGTGGT+TGG | - | chr1_2:2495856-2495875 | Msa0049330:five_prime_UTR | 50.0% | |
| AGTACAGTGAGGAGGAGCTG+AGG | - | chr1_2:2493493-2493512 | Msa0049330:intron | 55.0% | |
| GAGCGGTTGAGGTTGAAGTC+TGG | - | chr1_2:2493537-2493556 | Msa0049330:intron | 55.0% | |
| GGAGGGGTTAGGACTGATCA+TGG | + | chr1_2:2493986-2494005 | None:intergenic | 55.0% | |
| CCCACCATGGCAACTACATG+TGG | + | chr1_2:2494115-2494134 | None:intergenic | 55.0% | |
| GAAGAAACCGAGGCTTACGG+TGG | - | chr1_2:2494212-2494231 | Msa0049330:intron | 55.0% | |
| ACAGCCATGGGCTCATCAAC+GGG | + | chr1_2:2494487-2494506 | None:intergenic | 55.0% | |
| CACAGCCATGGGCTCATCAA+CGG | + | chr1_2:2494488-2494507 | None:intergenic | 55.0% | |
| ! | GTTGATGAGCCCATGGCTGT+GGG | - | chr1_2:2494487-2494506 | Msa0049330:intron | 55.0% |
| CATGGCTGGACAATGGCCAT+TGG | - | chr1_2:2494546-2494565 | Msa0049330:three_prime_UTR | 55.0% | |
| AATCCACACGTGGCAGCAGA+TGG | - | chr1_2:2495507-2495526 | Msa0049330:intron | 55.0% | |
| AATCCATCTGCTGCCACGTG+TGG | + | chr1_2:2495513-2495532 | None:intergenic | 55.0% | |
| GCTCTGCCATTCCTCAAGGA+AGG | + | chr1_2:2495648-2495667 | None:intergenic | 55.0% | |
| CAGTGAGGAGGAGCTGAGGT+TGG | - | chr1_2:2493497-2493516 | Msa0049330:intron | 60.0% | |
| CTTGGAGCAGAAGCCCACCA+TGG | + | chr1_2:2494128-2494147 | None:intergenic | 60.0% | |
| GATCGTGCCACCGTAAGCCT+CGG | + | chr1_2:2494222-2494241 | None:intergenic | 60.0% | |
| ! | AACCGAAGTTTGCTCGGGCC+TGG | - | chr1_2:2494255-2494274 | Msa0049330:intron | 60.0% |
| ! | ACCGAAGTTTGCTCGGGCCT+GGG | - | chr1_2:2494256-2494275 | Msa0049330:intron | 60.0% |
| ACCCAGGCCCGAGCAAACTT+CGG | + | chr1_2:2494260-2494279 | None:intergenic | 60.0% | |
| GGTCTAGTAGGATGTGGGCC+GGG | + | chr1_2:2494330-2494349 | None:intergenic | 60.0% | |
| CGGTCTAGTAGGATGTGGGC+CGG | + | chr1_2:2494331-2494350 | None:intergenic | 60.0% | |
| ! | CGTTGATGAGCCCATGGCTG+TGG | - | chr1_2:2494486-2494505 | Msa0049330:intron | 60.0% |
| TGAGCCCATGGCTGTGGGTA+TGG | - | chr1_2:2494492-2494511 | Msa0049330:intron | 60.0% | |
| CATGGGCTCATCAACGGGCC+CGG | + | chr1_2:2494482-2494501 | None:intergenic | 65.0% | |
| ! | CGGGCCCGTTGATGAGCCCA+TGG | - | chr1_2:2494480-2494499 | Msa0049330:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 2490185 | 2495880 | 2490185 | ID=Msa0049330;Name=Msa0049330 |
| chr1_2 | mRNA | 2490185 | 2495880 | 2490185 | ID=Msa0049330-mRNA-1;Parent=Msa0049330;Name=Msa0049330-mRNA-1;_AED=0.06;_eAED=0.06;_QI=482|1|1|1|0.5|0.44|9|1866|130 |
| chr1_2 | exon | 2490185 | 2490570 | 2490185 | ID=Msa0049330-mRNA-1:exon:551;Parent=Msa0049330-mRNA-1 |
| chr1_2 | exon | 2491273 | 2491980 | 2491273 | ID=Msa0049330-mRNA-1:exon:550;Parent=Msa0049330-mRNA-1 |
| chr1_2 | exon | 2492400 | 2492620 | 2492400 | ID=Msa0049330-mRNA-1:exon:549;Parent=Msa0049330-mRNA-1 |
| chr1_2 | exon | 2492715 | 2493057 | 2492715 | ID=Msa0049330-mRNA-1:exon:548;Parent=Msa0049330-mRNA-1 |
| chr1_2 | exon | 2493709 | 2493849 | 2493709 | ID=Msa0049330-mRNA-1:exon:547;Parent=Msa0049330-mRNA-1 |
| chr1_2 | exon | 2494533 | 2494963 | 2494533 | ID=Msa0049330-mRNA-1:exon:546;Parent=Msa0049330-mRNA-1 |
| chr1_2 | exon | 2495060 | 2495183 | 2495060 | ID=Msa0049330-mRNA-1:exon:545;Parent=Msa0049330-mRNA-1 |
| chr1_2 | exon | 2495395 | 2495507 | 2495395 | ID=Msa0049330-mRNA-1:exon:544;Parent=Msa0049330-mRNA-1 |
| chr1_2 | exon | 2495607 | 2495880 | 2495607 | ID=Msa0049330-mRNA-1:exon:543;Parent=Msa0049330-mRNA-1 |
| chr1_2 | five_prime_UTR | 2495607 | 2495880 | 2495607 | ID=Msa0049330-mRNA-1:five_prime_utr;Parent=Msa0049330-mRNA-1 |
| chr1_2 | five_prime_UTR | 2495395 | 2495507 | 2495395 | ID=Msa0049330-mRNA-1:five_prime_utr;Parent=Msa0049330-mRNA-1 |
| chr1_2 | five_prime_UTR | 2495089 | 2495183 | 2495089 | ID=Msa0049330-mRNA-1:five_prime_utr;Parent=Msa0049330-mRNA-1 |
| chr1_2 | CDS | 2495060 | 2495088 | 2495060 | ID=Msa0049330-mRNA-1:cds;Parent=Msa0049330-mRNA-1 |
| chr1_2 | CDS | 2494600 | 2494963 | 2494600 | ID=Msa0049330-mRNA-1:cds;Parent=Msa0049330-mRNA-1 |
| chr1_2 | three_prime_UTR | 2494533 | 2494599 | 2494533 | ID=Msa0049330-mRNA-1:three_prime_utr;Parent=Msa0049330-mRNA-1 |
| chr1_2 | three_prime_UTR | 2493709 | 2493849 | 2493709 | ID=Msa0049330-mRNA-1:three_prime_utr;Parent=Msa0049330-mRNA-1 |
| chr1_2 | three_prime_UTR | 2492715 | 2493057 | 2492715 | ID=Msa0049330-mRNA-1:three_prime_utr;Parent=Msa0049330-mRNA-1 |
| chr1_2 | three_prime_UTR | 2492400 | 2492620 | 2492400 | ID=Msa0049330-mRNA-1:three_prime_utr;Parent=Msa0049330-mRNA-1 |
| chr1_2 | three_prime_UTR | 2491273 | 2491980 | 2491273 | ID=Msa0049330-mRNA-1:three_prime_utr;Parent=Msa0049330-mRNA-1 |
| chr1_2 | three_prime_UTR | 2490185 | 2490570 | 2490185 | ID=Msa0049330-mRNA-1:three_prime_utr;Parent=Msa0049330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
