Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141870 | GAU33112.1 | 79.032 | 620 | 126 | 3 | 1 | 619 | 9 | 625 | 0.0 | 1004 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141870 | sp|Q9LHA8|HS704_ARATH | 64.640 | 625 | 214 | 5 | 1 | 622 | 1 | 621 | 0.0 | 818 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141870 | A0A2Z6N8I6 | 79.032 | 620 | 126 | 3 | 1 | 619 | 9 | 625 | 0.0 | 1004 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa1141870 | 0.803508 | 3.370958e-49 | -8.615850e-47 |
| Msa0047030 | Msa1141870 | 0.821282 | 4.386545e-53 | -8.615850e-47 |
| Msa0615710 | Msa1141870 | 0.800013 | 1.758476e-48 | -8.615850e-47 |
| Msa0661650 | Msa1141870 | 0.806908 | 6.544818e-50 | -8.615850e-47 |
| Msa0664600 | Msa1141870 | 0.801064 | 1.073823e-48 | -8.615850e-47 |
| Msa0681270 | Msa1141870 | 0.805954 | 1.040015e-49 | -8.615850e-47 |
| Msa0765910 | Msa1141870 | 0.806013 | 1.011035e-49 | -8.615850e-47 |
| Msa0838580 | Msa1141870 | 0.804250 | 2.363739e-49 | -8.615850e-47 |
| Msa0165210 | Msa1141870 | 0.803968 | 2.705866e-49 | -8.615850e-47 |
| Msa0165220 | Msa1141870 | 0.802670 | 5.025925e-49 | -8.615850e-47 |
| Msa0168500 | Msa1141870 | 0.803622 | 3.192937e-49 | -8.615850e-47 |
| Msa0170230 | Msa1141870 | 0.818509 | 1.888374e-52 | -8.615850e-47 |
| Msa0211150 | Msa1141870 | 0.841515 | 4.534580e-58 | -8.615850e-47 |
| Msa0212990 | Msa1141870 | 0.803863 | 2.845067e-49 | -8.615850e-47 |
| Msa0216910 | Msa1141870 | 0.806396 | 8.394032e-50 | -8.615850e-47 |
| Msa0376350 | Msa1141870 | 0.811902 | 5.548737e-51 | -8.615850e-47 |
| Msa0405130 | Msa1141870 | 0.813204 | 2.881308e-51 | -8.615850e-47 |
| Msa0424790 | Msa1141870 | 0.807896 | 4.040919e-50 | -8.615850e-47 |
| Msa0440750 | Msa1141870 | 0.807384 | 5.189301e-50 | -8.615850e-47 |
| Msa0464680 | Msa1141870 | 0.830033 | 3.687124e-55 | -8.615850e-47 |
| Msa0467490 | Msa1141870 | 0.831701 | 1.437788e-55 | -8.615850e-47 |
| Msa0471670 | Msa1141870 | 0.800330 | 1.515918e-48 | -8.615850e-47 |
| Msa0479170 | Msa1141870 | 0.811401 | 7.130258e-51 | -8.615850e-47 |
| Msa1004840 | Msa1141870 | 0.816834 | 4.507980e-52 | -8.615850e-47 |
| Msa1012020 | Msa1141870 | 0.828830 | 7.227772e-55 | -8.615850e-47 |
| Msa1065390 | Msa1141870 | 0.803664 | 3.128944e-49 | -8.615850e-47 |
| Msa1084960 | Msa1141870 | 0.819368 | 1.204627e-52 | -8.615850e-47 |
| Msa1101090 | Msa1141870 | 0.810086 | 1.372911e-50 | -8.615850e-47 |
| Msa0290720 | Msa1141870 | 0.800415 | 1.456856e-48 | -8.615850e-47 |
| Msa0330340 | Msa1141870 | 0.803905 | 2.788895e-49 | -8.615850e-47 |
| Msa0363790 | Msa1141870 | 0.801333 | 9.462755e-49 | -8.615850e-47 |
| Msa1111090 | Msa1141870 | 0.817344 | 3.462930e-52 | -8.615850e-47 |
| Msa1111130 | Msa1141870 | 0.806321 | 8.707620e-50 | -8.615850e-47 |
| Msa1137570 | Msa1141870 | 0.813098 | 3.039874e-51 | -8.615850e-47 |
| Msa1140210 | Msa1141870 | 0.813122 | 3.003185e-51 | -8.615850e-47 |
| Msa1141870 | Msa1142020 | 0.836015 | 1.198688e-56 | -8.615850e-47 |
| Msa1141870 | Msa1167340 | 0.806753 | 7.057515e-50 | -8.615850e-47 |
| Msa1141870 | Msa1171710 | 0.800330 | 1.516276e-48 | -8.615850e-47 |
| Msa1141870 | Msa1192090 | 0.806275 | 8.901317e-50 | -8.615850e-47 |
| Msa1141870 | Msa1209460 | 0.800930 | 1.143893e-48 | -8.615850e-47 |
| Msa1141870 | Msa1229500 | 0.813978 | 1.946556e-51 | -8.615850e-47 |
| Msa1141870 | Msa1242670 | 0.819074 | 1.405343e-52 | -8.615850e-47 |
| Msa1141870 | Msa1271990 | 0.826243 | 3.018648e-54 | -8.615850e-47 |
| Msa1141870 | Msa1287190 | 0.801226 | 9.948292e-49 | -8.615850e-47 |
| Msa1141870 | Msa1314650 | 0.801315 | 9.542393e-49 | -8.615850e-47 |
| Msa1141870 | Msa1333480 | 0.804428 | 2.170219e-49 | -8.615850e-47 |
| Msa1141870 | Msa1353980 | 0.800669 | 1.292820e-48 | -8.615850e-47 |
| Msa1141870 | Msa1360440 | 0.801662 | 8.101843e-49 | -8.615850e-47 |
| Msa1141870 | Msa1409700 | 0.803407 | 3.537503e-49 | -8.615850e-47 |
| Msa1141870 | Msa1436480 | 0.801137 | 1.037724e-48 | -8.615850e-47 |
| Msa1141870 | Msa1440560 | 0.805982 | 1.026056e-49 | -8.615850e-47 |
| Msa1141870 | Msa1464810 | 0.815767 | 7.810751e-52 | -8.615850e-47 |
| Msa0488560 | Msa1141870 | 0.804571 | 2.026335e-49 | -8.615850e-47 |
| Msa0516170 | Msa1141870 | 0.801714 | 7.903661e-49 | -8.615850e-47 |
| Msa0545210 | Msa1141870 | 0.806448 | 8.187874e-50 | -8.615850e-47 |
| Msa0875290 | Msa1141870 | 0.810064 | 1.388004e-50 | -8.615850e-47 |
| Msa0876190 | Msa1141870 | 0.801434 | 9.019845e-49 | -8.615850e-47 |
| Msa0880950 | Msa1141870 | 0.805266 | 1.450459e-49 | -8.615850e-47 |
| Msa0888130 | Msa1141870 | 0.801764 | 7.719497e-49 | -8.615850e-47 |
| Msa0898750 | Msa1141870 | 0.805724 | 1.162772e-49 | -8.615850e-47 |
| Msa0928130 | Msa1141870 | 0.802612 | 5.166495e-49 | -8.615850e-47 |
| Msa0963270 | Msa1141870 | 0.804228 | 2.389495e-49 | -8.615850e-47 |
| Msa0964310 | Msa1141870 | 0.804192 | 2.431045e-49 | -8.615850e-47 |
| Msa0967870 | Msa1141870 | 0.813224 | 2.852768e-51 | -8.615850e-47 |
| Msa0969600 | Msa1141870 | 0.801307 | 9.578973e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141870 | MtrunA17_Chr8g0350731 | 77.440 | 625 | 139 | 1 | 1 | 625 | 29 | 651 | 0.0 | 988 |
| Msa1141870 | MtrunA17_Chr7g0223711 | 76.651 | 621 | 142 | 2 | 1 | 620 | 1 | 619 | 0.0 | 987 |
| Msa1141870 | MtrunA17_Chr7g0223631 | 78.548 | 620 | 117 | 3 | 1 | 620 | 1 | 604 | 0.0 | 973 |
| Msa1141870 | MtrunA17_Chr7g0223751 | 74.720 | 625 | 156 | 1 | 1 | 625 | 1 | 623 | 0.0 | 966 |
| Msa1141870 | MtrunA17_Chr7g0223701 | 72.770 | 639 | 165 | 3 | 1 | 630 | 1 | 639 | 0.0 | 948 |
| Msa1141870 | MtrunA17_Chr7g0223621 | 73.453 | 614 | 161 | 1 | 1 | 614 | 1 | 612 | 0.0 | 929 |
| Msa1141870 | MtrunA17_Chr7g0248131 | 72.756 | 624 | 165 | 4 | 1 | 620 | 1 | 623 | 0.0 | 913 |
| Msa1141870 | MtrunA17_Chr7g0223731 | 72.447 | 617 | 168 | 1 | 1 | 617 | 1 | 615 | 0.0 | 912 |
| Msa1141870 | MtrunA17_Chr7g0248151 | 72.186 | 622 | 170 | 2 | 1 | 620 | 1 | 621 | 0.0 | 900 |
| Msa1141870 | MtrunA17_Chr7g0223031 | 71.824 | 614 | 171 | 1 | 1 | 614 | 1 | 612 | 0.0 | 897 |
| Msa1141870 | MtrunA17_Chr7g0223741 | 72.987 | 596 | 158 | 2 | 1 | 595 | 1 | 594 | 0.0 | 892 |
| Msa1141870 | MtrunA17_Chr7g0221661 | 66.232 | 613 | 204 | 2 | 1 | 612 | 1 | 611 | 0.0 | 827 |
| Msa1141870 | MtrunA17_Chr7g0223681 | 77.170 | 530 | 119 | 1 | 91 | 620 | 2 | 529 | 0.0 | 825 |
| Msa1141870 | MtrunA17_Chr2g0293581 | 65.747 | 616 | 206 | 4 | 6 | 618 | 7 | 620 | 0.0 | 823 |
| Msa1141870 | MtrunA17_Chr7g0223801 | 64.935 | 616 | 213 | 2 | 1 | 616 | 1 | 613 | 0.0 | 822 |
| Msa1141870 | MtrunA17_Chr7g0223781 | 66.829 | 615 | 199 | 3 | 1 | 614 | 1 | 611 | 0.0 | 820 |
| Msa1141870 | MtrunA17_Chr7g0223541 | 72.152 | 553 | 151 | 2 | 74 | 625 | 31 | 581 | 0.0 | 816 |
| Msa1141870 | MtrunA17_Chr5g0427901 | 64.013 | 628 | 212 | 3 | 1 | 616 | 1 | 626 | 0.0 | 813 |
| Msa1141870 | MtrunA17_Chr4g0031321 | 65.523 | 612 | 204 | 5 | 1 | 609 | 1 | 608 | 0.0 | 810 |
| Msa1141870 | MtrunA17_Chr7g0233311 | 64.297 | 619 | 216 | 3 | 1 | 616 | 1 | 617 | 0.0 | 808 |
| Msa1141870 | MtrunA17_Chr4g0031301 | 65.196 | 612 | 206 | 5 | 1 | 609 | 1 | 608 | 0.0 | 806 |
| Msa1141870 | MtrunA17_Chr7g0223291 | 64.205 | 623 | 216 | 5 | 1 | 620 | 1 | 619 | 0.0 | 805 |
| Msa1141870 | MtrunA17_Chr7g0223721 | 65.253 | 613 | 209 | 3 | 1 | 611 | 1 | 611 | 0.0 | 804 |
| Msa1141870 | MtrunA17_Chr7g0262821 | 63.434 | 629 | 223 | 5 | 1 | 626 | 1 | 625 | 0.0 | 803 |
| Msa1141870 | MtrunA17_Chr7g0223181 | 65.246 | 610 | 205 | 5 | 1 | 607 | 1 | 606 | 0.0 | 802 |
| Msa1141870 | MtrunA17_Chr2g0298851 | 64.297 | 619 | 215 | 5 | 1 | 616 | 1 | 616 | 0.0 | 801 |
| Msa1141870 | MtrunA17_Chr4g0073741 | 63.430 | 618 | 219 | 5 | 6 | 620 | 5 | 618 | 0.0 | 790 |
| Msa1141870 | MtrunA17_Chr2g0298861 | 64.000 | 625 | 209 | 5 | 1 | 611 | 1 | 623 | 0.0 | 788 |
| Msa1141870 | MtrunA17_Chr2g0287631 | 64.943 | 619 | 212 | 4 | 1 | 616 | 1 | 617 | 0.0 | 783 |
| Msa1141870 | MtrunA17_Chr7g0223851 | 62.945 | 618 | 225 | 3 | 1 | 616 | 10 | 625 | 0.0 | 781 |
| Msa1141870 | MtrunA17_Chr7g0225671 | 63.399 | 612 | 219 | 3 | 9 | 618 | 16 | 624 | 0.0 | 778 |
| Msa1141870 | MtrunA17_Chr4g0040931 | 63.875 | 609 | 216 | 3 | 1 | 607 | 1 | 607 | 0.0 | 777 |
| Msa1141870 | MtrunA17_Chr7g0217971 | 63.228 | 601 | 195 | 2 | 1 | 601 | 1 | 575 | 0.0 | 761 |
| Msa1141870 | MtrunA17_Chr7g0223821 | 62.582 | 612 | 220 | 3 | 1 | 606 | 1 | 609 | 0.0 | 745 |
| Msa1141870 | MtrunA17_Chr2g0296391 | 69.057 | 530 | 160 | 3 | 1 | 528 | 1 | 528 | 0.0 | 744 |
| Msa1141870 | MtrunA17_Chr7g0233301 | 59.289 | 619 | 216 | 3 | 1 | 616 | 1 | 586 | 0.0 | 733 |
| Msa1141870 | MtrunA17_Chr8g0390821 | 56.781 | 671 | 219 | 8 | 1 | 617 | 1 | 654 | 0.0 | 720 |
| Msa1141870 | MtrunA17_Chr4g0012541 | 61.008 | 595 | 220 | 3 | 1 | 594 | 1 | 584 | 0.0 | 719 |
| Msa1141870 | MtrunA17_Chr7g0223831 | 59.283 | 614 | 216 | 5 | 1 | 611 | 1 | 583 | 0.0 | 709 |
| Msa1141870 | MtrunA17_Chr7g0215261 | 58.795 | 614 | 214 | 5 | 1 | 611 | 1 | 578 | 0.0 | 701 |
| Msa1141870 | MtrunA17_Chr2g0293601 | 66.346 | 520 | 137 | 3 | 1 | 518 | 1 | 484 | 0.0 | 699 |
| Msa1141870 | MtrunA17_Chr6g0462601 | 57.610 | 611 | 250 | 5 | 1 | 606 | 1 | 607 | 0.0 | 686 |
| Msa1141870 | MtrunA17_Chr6g0462681 | 56.472 | 618 | 263 | 4 | 1 | 616 | 1 | 614 | 0.0 | 684 |
| Msa1141870 | MtrunA17_Chr2g0331381 | 63.080 | 539 | 136 | 3 | 10 | 548 | 7 | 482 | 0.0 | 680 |
| Msa1141870 | MtrunA17_Chr6g0462711 | 56.704 | 619 | 258 | 5 | 8 | 619 | 9 | 624 | 0.0 | 673 |
| Msa1141870 | MtrunA17_Chr7g0228281 | 55.968 | 620 | 224 | 5 | 1 | 618 | 62 | 634 | 0.0 | 670 |
| Msa1141870 | MtrunA17_Chr6g0462771 | 58.276 | 580 | 231 | 5 | 8 | 580 | 8 | 583 | 0.0 | 652 |
| Msa1141870 | MtrunA17_Chr6g0462641 | 55.250 | 619 | 266 | 5 | 8 | 619 | 8 | 622 | 0.0 | 652 |
| Msa1141870 | MtrunA17_Chr2g0284681 | 56.747 | 578 | 231 | 8 | 9 | 577 | 8 | 575 | 0.0 | 639 |
| Msa1141870 | MtrunA17_Chr8g0388761 | 54.653 | 591 | 255 | 9 | 7 | 592 | 36 | 618 | 0.0 | 626 |
| Msa1141870 | MtrunA17_Chr8g0388671 | 54.822 | 591 | 254 | 9 | 7 | 592 | 36 | 618 | 0.0 | 624 |
| Msa1141870 | MtrunA17_Chr2g0293561 | 74.599 | 374 | 95 | 0 | 1 | 374 | 1 | 374 | 0.0 | 608 |
| Msa1141870 | MtrunA17_Chr1g0166551 | 51.901 | 605 | 176 | 4 | 9 | 611 | 5 | 496 | 0.0 | 585 |
| Msa1141870 | MtrunA17_Chr6g0462611 | 54.495 | 545 | 242 | 4 | 74 | 616 | 22 | 562 | 0.0 | 575 |
| Msa1141870 | MtrunA17_Chr2g0299821 | 63.797 | 395 | 139 | 2 | 1 | 393 | 1 | 393 | 1.61e-180 | 520 |
| Msa1141870 | MtrunA17_Chr2g0299921 | 68.020 | 394 | 122 | 2 | 3 | 396 | 1023 | 1412 | 1.40e-177 | 549 |
| Msa1141870 | MtrunA17_Chr2g0299921 | 65.990 | 394 | 129 | 3 | 3 | 395 | 1407 | 1796 | 1.40e-162 | 509 |
| Msa1141870 | MtrunA17_Chr2g0299791 | 67.784 | 388 | 121 | 2 | 1 | 388 | 1034 | 1417 | 2.98e-175 | 535 |
| Msa1141870 | MtrunA17_Chr2g0299851 | 65.641 | 390 | 130 | 2 | 1 | 390 | 1030 | 1415 | 4.69e-174 | 532 |
| Msa1141870 | MtrunA17_Chr2g0293271 | 58.257 | 436 | 110 | 4 | 21 | 456 | 43 | 406 | 2.63e-170 | 491 |
| Msa1141870 | MtrunA17_Chr6g0462861 | 46.928 | 586 | 273 | 11 | 9 | 581 | 9 | 569 | 2.82e-165 | 487 |
| Msa1141870 | MtrunA17_Chr2g0299881 | 64.160 | 399 | 134 | 4 | 10 | 403 | 1039 | 1433 | 7.51e-164 | 506 |
| Msa1141870 | MtrunA17_Chr2g0299881 | 61.644 | 73 | 26 | 1 | 180 | 250 | 1403 | 1475 | 1.33e-18 | 90.5 |
| Msa1141870 | MtrunA17_Chr2g0279901 | 47.312 | 558 | 268 | 12 | 10 | 560 | 57 | 595 | 3.04e-158 | 470 |
| Msa1141870 | MtrunA17_Chr4g0049501 | 46.595 | 558 | 273 | 12 | 10 | 560 | 54 | 593 | 1.22e-155 | 463 |
| Msa1141870 | MtrunA17_Chr7g0245521 | 73.162 | 272 | 73 | 0 | 1 | 272 | 1 | 272 | 5.96e-150 | 434 |
| Msa1141870 | MtrunA17_Chr1g0151991 | 69.759 | 291 | 88 | 0 | 1 | 291 | 1 | 291 | 1.80e-148 | 431 |
| Msa1141870 | MtrunA17_Chr2g0277021 | 43.581 | 592 | 308 | 13 | 10 | 594 | 72 | 644 | 9.01e-147 | 441 |
| Msa1141870 | MtrunA17_Chr7g0223671 | 89.529 | 191 | 20 | 0 | 74 | 264 | 8 | 198 | 4.48e-122 | 360 |
| Msa1141870 | MtrunA17_Chr7g0223761 | 52.547 | 373 | 132 | 3 | 241 | 611 | 3 | 332 | 2.72e-120 | 361 |
| Msa1141870 | MtrunA17_Chr7g0245531 | 58.413 | 315 | 128 | 2 | 305 | 618 | 2 | 314 | 2.09e-118 | 355 |
| Msa1141870 | MtrunA17_Chr1g0152001 | 57.718 | 298 | 122 | 2 | 315 | 611 | 1 | 295 | 1.87e-106 | 324 |
| Msa1141870 | MtrunA17_Chr1g0188601 | 76.963 | 191 | 44 | 0 | 92 | 282 | 1 | 191 | 5.49e-105 | 316 |
| Msa1141870 | MtrunA17_Chr6g0462631 | 49.697 | 330 | 117 | 5 | 91 | 416 | 13 | 297 | 4.97e-99 | 304 |
| Msa1141870 | MtrunA17_Chr6g0462751 | 46.571 | 350 | 127 | 4 | 67 | 413 | 12 | 304 | 3.47e-93 | 290 |
| Msa1141870 | MtrunA17_Chr1g0188611 | 53.872 | 297 | 126 | 4 | 322 | 616 | 1 | 288 | 1.06e-82 | 261 |
| Msa1141870 | MtrunA17_Chr5g0394391 | 34.653 | 505 | 302 | 13 | 8 | 495 | 28 | 521 | 7.51e-80 | 263 |
| Msa1141870 | MtrunA17_Chr7g0223771 | 73.856 | 153 | 40 | 0 | 93 | 245 | 1 | 153 | 1.34e-79 | 249 |
| Msa1141870 | MtrunA17_Chr6g0462791 | 63.636 | 176 | 63 | 1 | 108 | 283 | 1 | 175 | 1.24e-72 | 231 |
| Msa1141870 | MtrunA17_Chr4g0004331 | 33.107 | 441 | 276 | 6 | 10 | 436 | 4 | 439 | 4.11e-70 | 243 |
| Msa1141870 | MtrunA17_Chr4g0046881 | 74.101 | 139 | 36 | 0 | 131 | 269 | 10 | 148 | 9.64e-69 | 220 |
| Msa1141870 | MtrunA17_Chr2g0331901 | 31.818 | 440 | 283 | 6 | 10 | 436 | 4 | 439 | 2.09e-68 | 238 |
| Msa1141870 | MtrunA17_Chr3g0098761 | 27.259 | 653 | 414 | 14 | 10 | 607 | 4 | 650 | 2.85e-65 | 228 |
| Msa1141870 | MtrunA17_Chr5g0444001 | 31.860 | 430 | 281 | 7 | 10 | 432 | 4 | 428 | 5.67e-64 | 220 |
| Msa1141870 | MtrunA17_Chr7g0223861 | 73.282 | 131 | 35 | 0 | 78 | 208 | 4 | 134 | 1.09e-62 | 203 |
| Msa1141870 | MtrunA17_Chr3g0120101 | 31.166 | 446 | 278 | 9 | 10 | 430 | 27 | 468 | 1.68e-57 | 208 |
| Msa1141870 | MtrunA17_Chr4g0064621 | 32.759 | 522 | 316 | 16 | 8 | 504 | 139 | 650 | 1.68e-56 | 203 |
| Msa1141870 | MtrunA17_Chr6g0462701 | 53.216 | 171 | 56 | 1 | 100 | 270 | 22 | 168 | 2.88e-52 | 177 |
| Msa1141870 | MtrunA17_Chr4g0060241 | 29.134 | 508 | 328 | 13 | 8 | 500 | 19 | 509 | 2.12e-51 | 186 |
| Msa1141870 | MtrunA17_Chr5g0394221 | 38.095 | 294 | 165 | 7 | 291 | 579 | 61 | 342 | 3.16e-49 | 175 |
| Msa1141870 | MtrunA17_Chr4g0046871 | 78.788 | 99 | 21 | 0 | 339 | 437 | 9 | 107 | 6.60e-47 | 160 |
| Msa1141870 | MtrunA17_Chr6g0481391 | 63.115 | 122 | 42 | 1 | 38 | 159 | 13 | 131 | 7.20e-47 | 161 |
| Msa1141870 | MtrunA17_Chr5g0394231 | 38.767 | 227 | 88 | 4 | 74 | 299 | 5 | 181 | 1.86e-44 | 156 |
| Msa1141870 | MtrunA17_Chr6g0462691 | 54.861 | 144 | 62 | 2 | 322 | 464 | 1 | 142 | 1.03e-43 | 154 |
| Msa1141870 | MtrunA17_Chr7g0245541 | 43.564 | 202 | 111 | 2 | 417 | 617 | 1 | 200 | 3.27e-43 | 154 |
| Msa1141870 | MtrunA17_Chr5g0442171 | 35.522 | 335 | 186 | 13 | 170 | 489 | 1 | 320 | 1.41e-42 | 156 |
| Msa1141870 | MtrunA17_Chr7g0223691 | 84.932 | 73 | 11 | 0 | 1 | 73 | 1 | 73 | 2.49e-40 | 141 |
| Msa1141870 | MtrunA17_Chr1g0188591 | 71.233 | 73 | 21 | 0 | 1 | 73 | 1 | 73 | 1.41e-30 | 115 |
| Msa1141870 | MtrunA17_Chr7g0223661 | 55.000 | 120 | 11 | 1 | 315 | 434 | 1 | 77 | 1.85e-30 | 114 |
| Msa1141870 | MtrunA17_Chr6g0481381 | 70.270 | 74 | 22 | 0 | 176 | 249 | 1 | 74 | 2.40e-29 | 115 |
| Msa1141870 | MtrunA17_Chr6g0481381 | 37.895 | 95 | 58 | 1 | 516 | 609 | 75 | 169 | 2.07e-11 | 63.5 |
| Msa1141870 | MtrunA17_Chr6g0462621 | 72.603 | 73 | 18 | 1 | 1 | 73 | 1 | 71 | 5.47e-29 | 110 |
| Msa1141870 | MtrunA17_Chr7g0223791 | 62.963 | 81 | 22 | 2 | 56 | 136 | 18 | 90 | 5.84e-26 | 105 |
| Msa1141870 | MtrunA17_Chr7g0223791 | 34.028 | 144 | 75 | 3 | 428 | 569 | 51 | 176 | 9.59e-14 | 70.1 |
| Msa1141870 | MtrunA17_Chr7g0223881 | 61.842 | 76 | 28 | 1 | 288 | 363 | 9 | 83 | 6.02e-24 | 96.3 |
| Msa1141870 | MtrunA17_Chr7g0221651 | 53.571 | 84 | 39 | 0 | 215 | 298 | 1 | 84 | 4.69e-23 | 93.6 |
| Msa1141870 | MtrunA17_Chr6g0462801 | 59.091 | 66 | 22 | 1 | 322 | 382 | 1 | 66 | 5.80e-16 | 73.2 |
| Msa1141870 | MtrunA17_Chr5g0442161 | 31.902 | 163 | 101 | 5 | 2 | 157 | 18 | 177 | 9.60e-16 | 75.9 |
| Msa1141870 | MtrunA17_Chr7g0223871 | 37.607 | 117 | 72 | 1 | 492 | 607 | 7 | 123 | 7.32e-15 | 72.0 |
| Msa1141870 | MtrunA17_Chr2g0284661 | 45.783 | 83 | 44 | 1 | 368 | 449 | 61 | 143 | 7.81e-15 | 72.0 |
| Msa1141870 | MtrunA17_Chr2g0299891 | 74.419 | 43 | 11 | 0 | 315 | 357 | 1 | 43 | 7.88e-15 | 69.7 |
| Msa1141870 | MtrunA17_Chr4g0064651 | 39.583 | 96 | 54 | 3 | 397 | 491 | 29 | 121 | 1.50e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1141870 | AT3G12580.1 | 64.640 | 625 | 214 | 5 | 1 | 622 | 1 | 621 | 0.0 | 818 |
| Msa1141870 | AT5G02500.1 | 64.706 | 612 | 209 | 5 | 1 | 609 | 1 | 608 | 0.0 | 803 |
| Msa1141870 | AT5G02490.1 | 63.725 | 612 | 215 | 5 | 1 | 609 | 1 | 608 | 0.0 | 794 |
| Msa1141870 | AT1G16030.1 | 63.415 | 615 | 218 | 5 | 9 | 620 | 8 | 618 | 0.0 | 785 |
| Msa1141870 | AT3G09440.1 | 63.562 | 612 | 216 | 5 | 1 | 609 | 1 | 608 | 0.0 | 783 |
| Msa1141870 | AT3G09440.4 | 63.562 | 612 | 216 | 5 | 1 | 609 | 1 | 608 | 0.0 | 783 |
| Msa1141870 | AT3G09440.2 | 63.562 | 612 | 216 | 5 | 1 | 609 | 1 | 608 | 0.0 | 783 |
| Msa1141870 | AT3G09440.3 | 63.562 | 612 | 216 | 5 | 1 | 609 | 1 | 608 | 0.0 | 783 |
| Msa1141870 | AT1G56410.1 | 61.637 | 623 | 230 | 6 | 1 | 620 | 1 | 617 | 0.0 | 764 |
| Msa1141870 | AT5G28540.1 | 55.428 | 608 | 258 | 9 | 7 | 609 | 35 | 634 | 0.0 | 645 |
| Msa1141870 | AT5G42020.1 | 55.428 | 608 | 258 | 9 | 7 | 609 | 35 | 634 | 0.0 | 642 |
| Msa1141870 | AT5G42020.3 | 55.428 | 608 | 258 | 9 | 7 | 609 | 40 | 639 | 0.0 | 641 |
| Msa1141870 | AT1G09080.2 | 54.194 | 620 | 272 | 8 | 2 | 617 | 35 | 646 | 0.0 | 617 |
| Msa1141870 | AT1G09080.1 | 54.194 | 620 | 272 | 8 | 2 | 617 | 45 | 656 | 0.0 | 616 |
| Msa1141870 | AT5G02500.2 | 73.146 | 391 | 102 | 2 | 1 | 390 | 1 | 389 | 0.0 | 597 |
| Msa1141870 | AT5G02500.2 | 39.785 | 93 | 56 | 0 | 517 | 609 | 386 | 478 | 2.30e-13 | 73.6 |
| Msa1141870 | AT5G42020.2 | 50.247 | 607 | 236 | 10 | 7 | 609 | 35 | 579 | 0.0 | 555 |
| Msa1141870 | AT5G09590.1 | 46.774 | 558 | 272 | 12 | 10 | 560 | 60 | 599 | 1.14e-153 | 459 |
| Msa1141870 | AT4G37910.1 | 46.416 | 558 | 274 | 12 | 10 | 560 | 55 | 594 | 3.20e-149 | 447 |
| Msa1141870 | AT4G37910.2 | 46.416 | 558 | 274 | 12 | 10 | 560 | 55 | 594 | 3.20e-149 | 447 |
| Msa1141870 | AT5G49910.1 | 41.961 | 622 | 334 | 14 | 10 | 623 | 81 | 683 | 4.36e-145 | 438 |
| Msa1141870 | AT4G24280.1 | 43.696 | 579 | 300 | 13 | 10 | 581 | 81 | 640 | 2.01e-144 | 436 |
| Msa1141870 | AT1G11660.4 | 27.970 | 665 | 413 | 13 | 10 | 620 | 4 | 656 | 3.72e-75 | 256 |
| Msa1141870 | AT1G11660.3 | 27.970 | 665 | 413 | 13 | 10 | 620 | 4 | 656 | 3.72e-75 | 256 |
| Msa1141870 | AT1G11660.1 | 27.970 | 665 | 413 | 13 | 10 | 620 | 4 | 656 | 3.72e-75 | 256 |
| Msa1141870 | AT2G32120.1 | 33.333 | 516 | 309 | 15 | 8 | 508 | 29 | 524 | 2.35e-70 | 238 |
| Msa1141870 | AT2G32120.2 | 33.333 | 516 | 309 | 15 | 8 | 508 | 29 | 524 | 2.35e-70 | 238 |
| Msa1141870 | AT1G79920.1 | 32.426 | 441 | 279 | 6 | 10 | 436 | 4 | 439 | 3.19e-70 | 242 |
| Msa1141870 | AT1G79920.3 | 32.426 | 441 | 279 | 6 | 10 | 436 | 4 | 439 | 4.46e-70 | 241 |
| Msa1141870 | AT1G79920.2 | 32.426 | 441 | 279 | 6 | 10 | 436 | 4 | 439 | 4.46e-70 | 241 |
| Msa1141870 | AT1G79920.4 | 32.426 | 441 | 279 | 6 | 10 | 436 | 4 | 439 | 4.46e-70 | 241 |
| Msa1141870 | AT1G79930.2 | 32.045 | 440 | 282 | 5 | 10 | 436 | 4 | 439 | 5.17e-70 | 242 |
| Msa1141870 | AT1G79930.1 | 32.045 | 440 | 282 | 5 | 10 | 436 | 4 | 439 | 1.20e-69 | 242 |
| Msa1141870 | AT1G11660.2 | 28.617 | 629 | 383 | 13 | 47 | 620 | 2 | 619 | 3.14e-69 | 239 |
| Msa1141870 | AT4G16660.1 | 27.810 | 525 | 336 | 11 | 6 | 495 | 23 | 539 | 1.37e-57 | 209 |
| Msa1141870 | AT4G16660.2 | 27.810 | 525 | 336 | 11 | 6 | 495 | 47 | 563 | 1.61e-57 | 209 |
Find 121 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCAACCTCCTCAAGGCTTT+TGG | 0.157336 | 7_4:-15506567 | None:intergenic |
| TATACTGTTGTGGCCCTTTA+AGG | 0.172434 | 7_4:+15506047 | Msa1141870:CDS |
| AGCAATTTCACCTGCATCTT+TGG | 0.215804 | 7_4:-15506265 | None:intergenic |
| TGTTTCTCTTCTCACAATTA+AGG | 0.222042 | 7_4:+15506416 | Msa1141870:CDS |
| TCCTTGTTGGTGGTTCTTCT+AGG | 0.249840 | 7_4:+15506802 | Msa1141870:CDS |
| CTTACTCTTGCGTTGGAGTA+TGG | 0.256437 | 7_4:+15505552 | Msa1141870:CDS |
| TTTGAAGTCAAGGCCACTTC+TGG | 0.262714 | 7_4:+15506447 | Msa1141870:CDS |
| CCTTGAAATTGTCAGCTTCC+TGG | 0.269169 | 7_4:-15507352 | None:intergenic |
| ATTACAATAACTAATGAAAA+TGG | 0.292577 | 7_4:+15507296 | Msa1141870:CDS |
| GACAGTGTTGGTTGGGTTAG+AGG | 0.297455 | 7_4:-15505696 | None:intergenic |
| AACACCAGCAATGACCTTAA+AGG | 0.304651 | 7_4:-15506061 | None:intergenic |
| TGTAATAACTGCCTCACTTT+AGG | 0.312891 | 7_4:-15506828 | None:intergenic |
| AGAACTTTCTTATATCAATA+AGG | 0.318987 | 7_4:+15506614 | Msa1141870:CDS |
| GATTAATTCTGCAATGATAA+AGG | 0.326851 | 7_4:+15507502 | Msa1141870:CDS |
| TGGCCCTTTAAGGTCATTGC+TGG | 0.328178 | 7_4:+15506057 | Msa1141870:CDS |
| TAAAGTGAGGCAGTTATTAC+AGG | 0.333837 | 7_4:+15506830 | Msa1141870:CDS |
| AACCCAACCAACACTGTCTT+TGG | 0.338640 | 7_4:+15505701 | Msa1141870:CDS |
| CCTGATGAGGCTGTTGCTTA+TGG | 0.340665 | 7_4:+15506891 | Msa1141870:CDS |
| TAAGTTTGAGCAACTGAATA+TGG | 0.355597 | 7_4:+15506698 | Msa1141870:CDS |
| ATCATAGCTGATATTTCTTC+GGG | 0.360547 | 7_4:-15506138 | None:intergenic |
| AATCATAGCTGATATTTCTT+CGG | 0.361993 | 7_4:-15506139 | None:intergenic |
| ACATCCCGCAATACCAAGTT+TGG | 0.367174 | 7_4:-15506960 | None:intergenic |
| CAGTATATCATTCTGAACTA+TGG | 0.370015 | 7_4:-15506031 | None:intergenic |
| TGTTCCAAACTTGGTATTGC+GGG | 0.380687 | 7_4:+15506956 | Msa1141870:CDS |
| AGTTGAAGCAAGAAATGCTT+TGG | 0.381737 | 7_4:+15507400 | Msa1141870:CDS |
| TGCTTATGGTGCAGCTGTCC+AGG | 0.386356 | 7_4:+15506905 | Msa1141870:CDS |
| CCATAAGCAACAGCCTCATC+AGG | 0.392319 | 7_4:-15506891 | None:intergenic |
| CGATGATCGTTGTGAAATAC+AGG | 0.394587 | 7_4:+15506094 | Msa1141870:CDS |
| TAAACTTGTGTCTTCTTGAA+TGG | 0.405865 | 7_4:-15507056 | None:intergenic |
| AGTTGAAATTATGGTTTATG+AGG | 0.406537 | 7_4:+15507112 | Msa1141870:CDS |
| AAGGGAGAAAGTTTGATTGA+TGG | 0.409606 | 7_4:+15507521 | Msa1141870:CDS |
| CACTAAGAATGTTCCAAACT+TGG | 0.411003 | 7_4:+15506947 | Msa1141870:CDS |
| AATTTCACCTGCATCTTTGG+TGG | 0.413962 | 7_4:-15506262 | None:intergenic |
| ACTGCAGCTGCTCTTGCATA+TGG | 0.416475 | 7_4:+15506321 | Msa1141870:CDS |
| TACCAAAGACAGTGTTGGTT+GGG | 0.419201 | 7_4:-15505703 | None:intergenic |
| TTCATCTTTGATCTCGGTGG+TGG | 0.426074 | 7_4:+15506384 | Msa1141870:CDS |
| AAAGATGCAGGTGAAATTGC+TGG | 0.431586 | 7_4:+15506267 | Msa1141870:CDS |
| AGAGATTGAGAGAATGATCC+AGG | 0.439899 | 7_4:+15507334 | Msa1141870:CDS |
| ATTAATTCTGCAATGATAAA+GGG | 0.444399 | 7_4:+15507503 | Msa1141870:CDS |
| ACACCAGCAATGACCTTAAA+GGG | 0.451256 | 7_4:-15506060 | None:intergenic |
| GTAGATGATGTAGTCCTTGT+TGG | 0.452511 | 7_4:+15506789 | Msa1141870:CDS |
| GTAATCACTGCATTCTCAAC+AGG | 0.458864 | 7_4:-15506204 | None:intergenic |
| ATGAAAATGGAAGATTATCA+AGG | 0.459072 | 7_4:+15507309 | Msa1141870:CDS |
| TATTATACCCCTCAGGTTGA+AGG | 0.476336 | 7_4:+15507077 | Msa1141870:CDS |
| TTATGAGTGTGGTGATTCCT+AGG | 0.478815 | 7_4:+15507021 | Msa1141870:CDS |
| TGAGAATCATTAAAATAAGC+AGG | 0.481016 | 7_4:-15506231 | None:intergenic |
| GGAAGCCCACGGGGAGCAAG+AGG | 0.482234 | 7_4:-15507191 | None:intergenic |
| GGACCTCTTTGAAAAGTGTA+TGG | 0.487372 | 7_4:+15506719 | Msa1141870:CDS |
| GATGTTACTCCTTTGTCACT+TGG | 0.489806 | 7_4:+15506978 | Msa1141870:CDS |
| CCAGGAAGCTGACAATTTCA+AGG | 0.491682 | 7_4:+15507352 | Msa1141870:CDS |
| CTGTATTTCACAACGATCAT+CGG | 0.501741 | 7_4:-15506093 | None:intergenic |
| GTTGAAATTATGGTTTATGA+GGG | 0.502673 | 7_4:+15507113 | Msa1141870:CDS |
| TTGTCTTGCAGATGCTAAGA+TGG | 0.509643 | 7_4:+15506755 | Msa1141870:CDS |
| ATCATTAAAATAAGCAGGTA+CGG | 0.510353 | 7_4:-15506226 | None:intergenic |
| TACTTTGCTATAGATGCTAA+TGG | 0.512958 | 7_4:+15507224 | Msa1141870:CDS |
| AATGGTACAGAAGTATTCCT+AGG | 0.513462 | 7_4:-15507038 | None:intergenic |
| AAGAACCAAGTTGACATTAG+TGG | 0.515239 | 7_4:+15506540 | Msa1141870:CDS |
| TTTGATTGATGGCAACCAGC+AGG | 0.518662 | 7_4:+15507532 | Msa1141870:CDS |
| AGAAGAGCCACCAAAGATGC+AGG | 0.521744 | 7_4:+15506255 | Msa1141870:CDS |
| TCACTTGGTATCGATACAAA+AGG | 0.522255 | 7_4:+15506993 | Msa1141870:CDS |
| AAGTTCCTCTTGCTCCCCGT+GGG | 0.528868 | 7_4:+15507186 | Msa1141870:CDS |
| GAAATCATACACAATGATCA+AGG | 0.529854 | 7_4:+15505596 | Msa1141870:CDS |
| GGACGCCACTAATGTCAACT+TGG | 0.531186 | 7_4:-15506545 | None:intergenic |
| GGATAATGTCTTTGAAGTCA+AGG | 0.535065 | 7_4:+15506437 | Msa1141870:CDS |
| GTTGCGATCGGAATTGACCT+TGG | 0.535133 | 7_4:+15505524 | Msa1141870:CDS |
| ACTGGAACTCAAAGGTTGGT+TGG | 0.538381 | 7_4:+15505650 | Msa1141870:CDS |
| CCAGTAAAAGCAACACAAGA+AGG | 0.544224 | 7_4:-15505632 | None:intergenic |
| ATTCATTACCTTCAACCTGA+GGG | 0.545600 | 7_4:-15507085 | None:intergenic |
| ACAAGTTTATTATACCCCTC+AGG | 0.549663 | 7_4:+15507070 | Msa1141870:CDS |
| GGTTGCGAAATTCTTGCGAA+AGG | 0.551964 | 7_4:+15506583 | Msa1141870:CDS |
| AAAGTTCCTCTTGCTCCCCG+TGG | 0.555857 | 7_4:+15507185 | Msa1141870:CDS |
| GTTGCGAAATTCTTGCGAAA+GGG | 0.558548 | 7_4:+15506584 | Msa1141870:CDS |
| ACTTTGTGAAAGAGTTTGAA+AGG | 0.558605 | 7_4:+15506517 | Msa1141870:CDS |
| GACATAGATGCTCTATGTCA+AGG | 0.558830 | 7_4:+15506645 | Msa1141870:CDS |
| TACTGTGAGAGGAAGCCCAC+GGG | 0.560599 | 7_4:-15507201 | None:intergenic |
| GGAACGACTTACTCTTGCGT+TGG | 0.561375 | 7_4:+15505545 | Msa1141870:CDS |
| GATGATGTAGTCCTTGTTGG+TGG | 0.568404 | 7_4:+15506792 | Msa1141870:CDS |
| GCAAGTGAGAACAACTTGCT+TGG | 0.568418 | 7_4:+15507149 | Msa1141870:CDS |
| AGAATTTCGCAACCTCCTCA+AGG | 0.576040 | 7_4:-15506574 | None:intergenic |
| AAACAGACGTATCTTCCTGC+TGG | 0.578169 | 7_4:-15507547 | None:intergenic |
| TAATCTTCTCTTTGTCTACA+CGG | 0.578212 | 7_4:-15507484 | None:intergenic |
| AGAGGACTTTGATAACAGAA+TGG | 0.578386 | 7_4:+15506488 | Msa1141870:CDS |
| AAAAGGAGATATTATGAGTG+TGG | 0.581319 | 7_4:+15507010 | Msa1141870:CDS |
| CGCAAGAGTAAGTCGTTCCA+AGG | 0.583763 | 7_4:-15505541 | None:intergenic |
| TGAAAATGGAAGATTATCAA+GGG | 0.589866 | 7_4:+15507310 | Msa1141870:CDS |
| ATGTTCCAAACTTGGTATTG+CGG | 0.589963 | 7_4:+15506955 | Msa1141870:CDS |
| TATGCAAGAGCAGCTGCAGT+TGG | 0.590893 | 7_4:-15506318 | None:intergenic |
| TAGAGCATCTATGTCAATTG+TGG | 0.591331 | 7_4:-15506637 | None:intergenic |
| CTTCACCAAGCAAAACAGCC+TGG | 0.591823 | 7_4:-15506923 | None:intergenic |
| GAGGTGTGTGTCTCCAGAAG+TGG | 0.591955 | 7_4:-15506460 | None:intergenic |
| TGAATTACCAAAGACAGTGT+TGG | 0.594114 | 7_4:-15505708 | None:intergenic |
| TTACCAAAGACAGTGTTGGT+TGG | 0.599364 | 7_4:-15505704 | None:intergenic |
| ACTTCTGTTCATCAATCACA+CGG | 0.600341 | 7_4:+15506673 | Msa1141870:CDS |
| CTTCTAGGATTCCTAAAGTG+AGG | 0.600875 | 7_4:+15506817 | Msa1141870:CDS |
| ATAGCAAAGTATACTGTGAG+AGG | 0.602824 | 7_4:-15507212 | None:intergenic |
| AATTCATTACCTTCAACCTG+AGG | 0.604405 | 7_4:-15507086 | None:intergenic |
| CGTTGTGAAATACAGGGGCA+AGG | 0.607751 | 7_4:+15506101 | Msa1141870:CDS |
| GAATGAACAGAACGATAGAG+TGG | 0.608601 | 7_4:+15505574 | Msa1141870:CDS |
| TATATTAAACGTCTCTGCAG+TGG | 0.608686 | 7_4:+15507247 | Msa1141870:CDS |
| AAATACGATGGAGTTGCGAT+CGG | 0.608848 | 7_4:+15505512 | Msa1141870:CDS |
| TTCAGAATGATATACTGTTG+TGG | 0.614464 | 7_4:+15506037 | Msa1141870:CDS |
| AGACACACACCTCGGAGGAG+AGG | 0.619985 | 7_4:+15506470 | Msa1141870:CDS |
| AAAAGCAACACAAGAAGGAG+TGG | 0.623125 | 7_4:-15505627 | None:intergenic |
| CATAAGCAACAGCCTCATCA+GGG | 0.634330 | 7_4:-15506890 | None:intergenic |
| GCTATGAATAAGATCGACAA+AGG | 0.637168 | 7_4:+15507611 | Msa1141870:CDS |
| CAAGAGCATTAACCCTGATG+AGG | 0.639574 | 7_4:+15506878 | Msa1141870:CDS |
| GGACTTTGATAACAGAATGG+TGG | 0.643649 | 7_4:+15506491 | Msa1141870:CDS |
| GTATCGATACCAAGTGACAA+AGG | 0.643846 | 7_4:-15506987 | None:intergenic |
| TTCATTACCTTCAACCTGAG+GGG | 0.647883 | 7_4:-15507084 | None:intergenic |
| TCCTAGAAGAACCACCAACA+AGG | 0.656071 | 7_4:-15506803 | None:intergenic |
| GCGTCCCAAAAGCCTTGAGG+AGG | 0.663602 | 7_4:+15506562 | Msa1141870:CDS |
| GTGGCGTCCCAAAAGCCTTG+AGG | 0.664119 | 7_4:+15506559 | Msa1141870:CDS |
| GATGATCGTTGTGAAATACA+GGG | 0.665247 | 7_4:+15506095 | Msa1141870:CDS |
| ACTTCTGGAGACACACACCT+CGG | 0.666959 | 7_4:+15506462 | Msa1141870:CDS |
| CTTCTGTTCATCAATCACAC+GGG | 0.674858 | 7_4:+15506674 | Msa1141870:CDS |
| TATCAAAGTCCTCTCCTCCG+AGG | 0.688667 | 7_4:-15506479 | None:intergenic |
| ATACTGTGAGAGGAAGCCCA+CGG | 0.688739 | 7_4:-15507202 | None:intergenic |
| ATGATCGTTGTGAAATACAG+GGG | 0.709998 | 7_4:+15506096 | Msa1141870:CDS |
| TCTGGAGACACACACCTCGG+AGG | 0.712848 | 7_4:+15506465 | Msa1141870:CDS |
| TCTGCAGTGGAAGAAACCAG+TGG | 0.733951 | 7_4:+15507260 | Msa1141870:CDS |
| ACTGTGAGAGGAAGCCCACG+GGG | 0.763418 | 7_4:-15507200 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATTTTTAGTTGAAATTA+TGG | + | chr7_4:15507103-15507122 | Msa1141870:CDS | 15.0% |
| !! | ATTACAATAACTAATGAAAA+TGG | + | chr7_4:15507296-15507315 | Msa1141870:CDS | 15.0% |
| !!! | TGAATTTTTAGTTGAAATTA+TGG | + | chr7_4:15507103-15507122 | Msa1141870:CDS | 15.0% |
| !! | ATTACAATAACTAATGAAAA+TGG | + | chr7_4:15507296-15507315 | Msa1141870:CDS | 15.0% |
| !!! | TCATTCTTTGATTTCTATTT+AGG | + | chr7_4:15505745-15505764 | Msa1141870:intron | 20.0% |
| !!! | CATTCTTTGATTTCTATTTA+GGG | + | chr7_4:15505746-15505765 | Msa1141870:intron | 20.0% |
| !!! | AATATTTTCATCTTTGATCT+CGG | + | chr7_4:15506378-15506397 | Msa1141870:CDS | 20.0% |
| !! | AGAACTTTCTTATATCAATA+AGG | + | chr7_4:15506614-15506633 | Msa1141870:CDS | 20.0% |
| !! | ATTAATTCTGCAATGATAAA+GGG | + | chr7_4:15507503-15507522 | Msa1141870:CDS | 20.0% |
| !!! | TGTTTTTGTAAACTTTTTGA+AGG | + | chr7_4:15507565-15507584 | Msa1141870:CDS | 20.0% |
| !!! | TCATTCTTTGATTTCTATTT+AGG | + | chr7_4:15505745-15505764 | Msa1141870:intron | 20.0% |
| !!! | CATTCTTTGATTTCTATTTA+GGG | + | chr7_4:15505746-15505765 | Msa1141870:intron | 20.0% |
| !!! | AATATTTTCATCTTTGATCT+CGG | + | chr7_4:15506378-15506397 | Msa1141870:CDS | 20.0% |
| !! | AGAACTTTCTTATATCAATA+AGG | + | chr7_4:15506614-15506633 | Msa1141870:CDS | 20.0% |
| !! | ATTAATTCTGCAATGATAAA+GGG | + | chr7_4:15507503-15507522 | Msa1141870:CDS | 20.0% |
| !!! | TGTTTTTGTAAACTTTTTGA+AGG | + | chr7_4:15507565-15507584 | Msa1141870:CDS | 20.0% |
| ! | AATCATAGCTGATATTTCTT+CGG | - | chr7_4:15506142-15506161 | None:intergenic | 25.0% |
| ! | ATCATTAAAATAAGCAGGTA+CGG | - | chr7_4:15506229-15506248 | None:intergenic | 25.0% |
| ! | TGAGAATCATTAAAATAAGC+AGG | - | chr7_4:15506234-15506253 | None:intergenic | 25.0% |
| !!! | TTATTACAGGAGTTTTTCAA+AGG | + | chr7_4:15506843-15506862 | Msa1141870:CDS | 25.0% |
| !!! | TATTACAGGAGTTTTTCAAA+GGG | + | chr7_4:15506844-15506863 | Msa1141870:CDS | 25.0% |
| ! | AGTTGAAATTATGGTTTATG+AGG | + | chr7_4:15507112-15507131 | Msa1141870:CDS | 25.0% |
| ! | GTTGAAATTATGGTTTATGA+GGG | + | chr7_4:15507113-15507132 | Msa1141870:CDS | 25.0% |
| !!! | AATTTCATTTTTATTGCCAC+TGG | - | chr7_4:15507279-15507298 | None:intergenic | 25.0% |
| ! | ATGAAAATGGAAGATTATCA+AGG | + | chr7_4:15507309-15507328 | Msa1141870:CDS | 25.0% |
| ! | TGAAAATGGAAGATTATCAA+GGG | + | chr7_4:15507310-15507329 | Msa1141870:CDS | 25.0% |
| ! | GATTAATTCTGCAATGATAA+AGG | + | chr7_4:15507502-15507521 | Msa1141870:CDS | 25.0% |
| ! | AATCATAGCTGATATTTCTT+CGG | - | chr7_4:15506142-15506161 | None:intergenic | 25.0% |
| ! | ATCATTAAAATAAGCAGGTA+CGG | - | chr7_4:15506229-15506248 | None:intergenic | 25.0% |
| ! | TGAGAATCATTAAAATAAGC+AGG | - | chr7_4:15506234-15506253 | None:intergenic | 25.0% |
| !!! | TTATTACAGGAGTTTTTCAA+AGG | + | chr7_4:15506843-15506862 | Msa1141870:CDS | 25.0% |
| !!! | TATTACAGGAGTTTTTCAAA+GGG | + | chr7_4:15506844-15506863 | Msa1141870:CDS | 25.0% |
| ! | AGTTGAAATTATGGTTTATG+AGG | + | chr7_4:15507112-15507131 | Msa1141870:CDS | 25.0% |
| ! | GTTGAAATTATGGTTTATGA+GGG | + | chr7_4:15507113-15507132 | Msa1141870:CDS | 25.0% |
| !!! | AATTTCATTTTTATTGCCAC+TGG | - | chr7_4:15507279-15507298 | None:intergenic | 25.0% |
| ! | ATGAAAATGGAAGATTATCA+AGG | + | chr7_4:15507309-15507328 | Msa1141870:CDS | 25.0% |
| ! | TGAAAATGGAAGATTATCAA+GGG | + | chr7_4:15507310-15507329 | Msa1141870:CDS | 25.0% |
| ! | GATTAATTCTGCAATGATAA+AGG | + | chr7_4:15507502-15507521 | Msa1141870:CDS | 25.0% |
| GAAATCATACACAATGATCA+AGG | + | chr7_4:15505596-15505615 | Msa1141870:CDS | 30.0% | |
| ! | TAATTTTTGCAGATGCAAAG+AGG | + | chr7_4:15505983-15506002 | Msa1141870:intron | 30.0% |
| CAGTATATCATTCTGAACTA+TGG | - | chr7_4:15506034-15506053 | None:intergenic | 30.0% | |
| TTCAGAATGATATACTGTTG+TGG | + | chr7_4:15506037-15506056 | Msa1141870:CDS | 30.0% | |
| ATCATAGCTGATATTTCTTC+GGG | - | chr7_4:15506141-15506160 | None:intergenic | 30.0% | |
| TGTTTCTCTTCTCACAATTA+AGG | + | chr7_4:15506416-15506435 | Msa1141870:CDS | 30.0% | |
| ACTTTGTGAAAGAGTTTGAA+AGG | + | chr7_4:15506517-15506536 | Msa1141870:CDS | 30.0% | |
| TAAGTTTGAGCAACTGAATA+TGG | + | chr7_4:15506698-15506717 | Msa1141870:CDS | 30.0% | |
| AAAAGGAGATATTATGAGTG+TGG | + | chr7_4:15507010-15507029 | Msa1141870:CDS | 30.0% | |
| TAAACTTGTGTCTTCTTGAA+TGG | - | chr7_4:15507059-15507078 | None:intergenic | 30.0% | |
| ! | TACTTTGCTATAGATGCTAA+TGG | + | chr7_4:15507224-15507243 | Msa1141870:CDS | 30.0% |
| TAATCTTCTCTTTGTCTACA+CGG | - | chr7_4:15507487-15507506 | None:intergenic | 30.0% | |
| GAAATCATACACAATGATCA+AGG | + | chr7_4:15505596-15505615 | Msa1141870:CDS | 30.0% | |
| ! | TAATTTTTGCAGATGCAAAG+AGG | + | chr7_4:15505983-15506002 | Msa1141870:intron | 30.0% |
| CAGTATATCATTCTGAACTA+TGG | - | chr7_4:15506034-15506053 | None:intergenic | 30.0% | |
| TTCAGAATGATATACTGTTG+TGG | + | chr7_4:15506037-15506056 | Msa1141870:CDS | 30.0% | |
| ATCATAGCTGATATTTCTTC+GGG | - | chr7_4:15506141-15506160 | None:intergenic | 30.0% | |
| TGTTTCTCTTCTCACAATTA+AGG | + | chr7_4:15506416-15506435 | Msa1141870:CDS | 30.0% | |
| ACTTTGTGAAAGAGTTTGAA+AGG | + | chr7_4:15506517-15506536 | Msa1141870:CDS | 30.0% | |
| TAAGTTTGAGCAACTGAATA+TGG | + | chr7_4:15506698-15506717 | Msa1141870:CDS | 30.0% | |
| AAAAGGAGATATTATGAGTG+TGG | + | chr7_4:15507010-15507029 | Msa1141870:CDS | 30.0% | |
| TAAACTTGTGTCTTCTTGAA+TGG | - | chr7_4:15507059-15507078 | None:intergenic | 30.0% | |
| ! | TACTTTGCTATAGATGCTAA+TGG | + | chr7_4:15507224-15507243 | Msa1141870:CDS | 30.0% |
| TAATCTTCTCTTTGTCTACA+CGG | - | chr7_4:15507487-15507506 | None:intergenic | 30.0% | |
| !! | TTGCTTTTACTGGAACTCAA+AGG | + | chr7_4:15505642-15505661 | Msa1141870:CDS | 35.0% |
| ! | TTTTACTGGAACTCAAAGGT+TGG | + | chr7_4:15505646-15505665 | Msa1141870:CDS | 35.0% |
| ! | GTTAGAGGAAGCTTGATTTT+TGG | - | chr7_4:15505684-15505703 | None:intergenic | 35.0% |
| TGAATTACCAAAGACAGTGT+TGG | - | chr7_4:15505711-15505730 | None:intergenic | 35.0% | |
| CTGTATTTCACAACGATCAT+CGG | - | chr7_4:15506096-15506115 | None:intergenic | 35.0% | |
| GATGATCGTTGTGAAATACA+GGG | + | chr7_4:15506095-15506114 | Msa1141870:CDS | 35.0% | |
| ATGATCGTTGTGAAATACAG+GGG | + | chr7_4:15506096-15506115 | Msa1141870:CDS | 35.0% | |
| !!! | AGAGATTGCAGAAGCATTTT+TGG | + | chr7_4:15506176-15506195 | Msa1141870:CDS | 35.0% |
| ! | ATTTTCATCTTTGATCTCGG+TGG | + | chr7_4:15506381-15506400 | Msa1141870:CDS | 35.0% |
| !! | GGATAATGTCTTTGAAGTCA+AGG | + | chr7_4:15506437-15506456 | Msa1141870:CDS | 35.0% |
| ! | AGAGGACTTTGATAACAGAA+TGG | + | chr7_4:15506488-15506507 | Msa1141870:CDS | 35.0% |
| ! | AAGAACCAAGTTGACATTAG+TGG | + | chr7_4:15506540-15506559 | Msa1141870:CDS | 35.0% |
| ! | TAGAGCATCTATGTCAATTG+TGG | - | chr7_4:15506640-15506659 | None:intergenic | 35.0% |
| ACTTCTGTTCATCAATCACA+CGG | + | chr7_4:15506673-15506692 | Msa1141870:CDS | 35.0% | |
| ! | TCTCCATACACTTTTCAAAG+AGG | - | chr7_4:15506725-15506744 | None:intergenic | 35.0% |
| TGTAATAACTGCCTCACTTT+AGG | - | chr7_4:15506831-15506850 | None:intergenic | 35.0% | |
| TAAAGTGAGGCAGTTATTAC+AGG | + | chr7_4:15506830-15506849 | Msa1141870:CDS | 35.0% | |
| CACTAAGAATGTTCCAAACT+TGG | + | chr7_4:15506947-15506966 | Msa1141870:CDS | 35.0% | |
| ATGTTCCAAACTTGGTATTG+CGG | + | chr7_4:15506955-15506974 | Msa1141870:CDS | 35.0% | |
| !! | TCACTTGGTATCGATACAAA+AGG | + | chr7_4:15506993-15507012 | Msa1141870:CDS | 35.0% |
| !! | AATGGTACAGAAGTATTCCT+AGG | - | chr7_4:15507041-15507060 | None:intergenic | 35.0% |
| ACAAGTTTATTATACCCCTC+AGG | + | chr7_4:15507070-15507089 | Msa1141870:CDS | 35.0% | |
| ATTCATTACCTTCAACCTGA+GGG | - | chr7_4:15507088-15507107 | None:intergenic | 35.0% | |
| AATTCATTACCTTCAACCTG+AGG | - | chr7_4:15507089-15507108 | None:intergenic | 35.0% | |
| ATAGCAAAGTATACTGTGAG+AGG | - | chr7_4:15507215-15507234 | None:intergenic | 35.0% | |
| TATATTAAACGTCTCTGCAG+TGG | + | chr7_4:15507247-15507266 | Msa1141870:CDS | 35.0% | |
| AGTTGAAGCAAGAAATGCTT+TGG | + | chr7_4:15507400-15507419 | Msa1141870:CDS | 35.0% | |
| AAGGGAGAAAGTTTGATTGA+TGG | + | chr7_4:15507521-15507540 | Msa1141870:CDS | 35.0% | |
| !! | CTTTTTGAAGGAGCTTAAGA+TGG | + | chr7_4:15507577-15507596 | Msa1141870:CDS | 35.0% |
| GCTATGAATAAGATCGACAA+AGG | + | chr7_4:15507611-15507630 | Msa1141870:CDS | 35.0% | |
| !! | TTGCTTTTACTGGAACTCAA+AGG | + | chr7_4:15505642-15505661 | Msa1141870:CDS | 35.0% |
| ! | TTTTACTGGAACTCAAAGGT+TGG | + | chr7_4:15505646-15505665 | Msa1141870:CDS | 35.0% |
| ! | GTTAGAGGAAGCTTGATTTT+TGG | - | chr7_4:15505684-15505703 | None:intergenic | 35.0% |
| TGAATTACCAAAGACAGTGT+TGG | - | chr7_4:15505711-15505730 | None:intergenic | 35.0% | |
| CTGTATTTCACAACGATCAT+CGG | - | chr7_4:15506096-15506115 | None:intergenic | 35.0% | |
| GATGATCGTTGTGAAATACA+GGG | + | chr7_4:15506095-15506114 | Msa1141870:CDS | 35.0% | |
| ATGATCGTTGTGAAATACAG+GGG | + | chr7_4:15506096-15506115 | Msa1141870:CDS | 35.0% | |
| !!! | AGAGATTGCAGAAGCATTTT+TGG | + | chr7_4:15506176-15506195 | Msa1141870:CDS | 35.0% |
| ! | ATTTTCATCTTTGATCTCGG+TGG | + | chr7_4:15506381-15506400 | Msa1141870:CDS | 35.0% |
| !! | GGATAATGTCTTTGAAGTCA+AGG | + | chr7_4:15506437-15506456 | Msa1141870:CDS | 35.0% |
| ! | AGAGGACTTTGATAACAGAA+TGG | + | chr7_4:15506488-15506507 | Msa1141870:CDS | 35.0% |
| ! | AAGAACCAAGTTGACATTAG+TGG | + | chr7_4:15506540-15506559 | Msa1141870:CDS | 35.0% |
| ! | TAGAGCATCTATGTCAATTG+TGG | - | chr7_4:15506640-15506659 | None:intergenic | 35.0% |
| ACTTCTGTTCATCAATCACA+CGG | + | chr7_4:15506673-15506692 | Msa1141870:CDS | 35.0% | |
| ! | TCTCCATACACTTTTCAAAG+AGG | - | chr7_4:15506725-15506744 | None:intergenic | 35.0% |
| TGTAATAACTGCCTCACTTT+AGG | - | chr7_4:15506831-15506850 | None:intergenic | 35.0% | |
| TAAAGTGAGGCAGTTATTAC+AGG | + | chr7_4:15506830-15506849 | Msa1141870:CDS | 35.0% | |
| CACTAAGAATGTTCCAAACT+TGG | + | chr7_4:15506947-15506966 | Msa1141870:CDS | 35.0% | |
| ATGTTCCAAACTTGGTATTG+CGG | + | chr7_4:15506955-15506974 | Msa1141870:CDS | 35.0% | |
| !! | TCACTTGGTATCGATACAAA+AGG | + | chr7_4:15506993-15507012 | Msa1141870:CDS | 35.0% |
| !! | AATGGTACAGAAGTATTCCT+AGG | - | chr7_4:15507041-15507060 | None:intergenic | 35.0% |
| ACAAGTTTATTATACCCCTC+AGG | + | chr7_4:15507070-15507089 | Msa1141870:CDS | 35.0% | |
| ATTCATTACCTTCAACCTGA+GGG | - | chr7_4:15507088-15507107 | None:intergenic | 35.0% | |
| AATTCATTACCTTCAACCTG+AGG | - | chr7_4:15507089-15507108 | None:intergenic | 35.0% | |
| ATAGCAAAGTATACTGTGAG+AGG | - | chr7_4:15507215-15507234 | None:intergenic | 35.0% | |
| TATATTAAACGTCTCTGCAG+TGG | + | chr7_4:15507247-15507266 | Msa1141870:CDS | 35.0% | |
| AGTTGAAGCAAGAAATGCTT+TGG | + | chr7_4:15507400-15507419 | Msa1141870:CDS | 35.0% | |
| AAGGGAGAAAGTTTGATTGA+TGG | + | chr7_4:15507521-15507540 | Msa1141870:CDS | 35.0% | |
| !! | CTTTTTGAAGGAGCTTAAGA+TGG | + | chr7_4:15507577-15507596 | Msa1141870:CDS | 35.0% |
| GCTATGAATAAGATCGACAA+AGG | + | chr7_4:15507611-15507630 | Msa1141870:CDS | 35.0% | |
| AAATACGATGGAGTTGCGAT+CGG | + | chr7_4:15505512-15505531 | Msa1141870:CDS | 40.0% | |
| GAATGAACAGAACGATAGAG+TGG | + | chr7_4:15505574-15505593 | Msa1141870:CDS | 40.0% | |
| AAAAGCAACACAAGAAGGAG+TGG | - | chr7_4:15505630-15505649 | None:intergenic | 40.0% | |
| CCAGTAAAAGCAACACAAGA+AGG | - | chr7_4:15505635-15505654 | None:intergenic | 40.0% | |
| !!! | CCTTCTTGTGTTGCTTTTAC+TGG | + | chr7_4:15505632-15505651 | Msa1141870:CDS | 40.0% |
| !! | TACCAAAGACAGTGTTGGTT+GGG | - | chr7_4:15505706-15505725 | None:intergenic | 40.0% |
| !! | TTACCAAAGACAGTGTTGGT+TGG | - | chr7_4:15505707-15505726 | None:intergenic | 40.0% |
| TATACTGTTGTGGCCCTTTA+AGG | + | chr7_4:15506047-15506066 | Msa1141870:CDS | 40.0% | |
| ACACCAGCAATGACCTTAAA+GGG | - | chr7_4:15506063-15506082 | None:intergenic | 40.0% | |
| AACACCAGCAATGACCTTAA+AGG | - | chr7_4:15506064-15506083 | None:intergenic | 40.0% | |
| CGATGATCGTTGTGAAATAC+AGG | + | chr7_4:15506094-15506113 | Msa1141870:CDS | 40.0% | |
| GTAATCACTGCATTCTCAAC+AGG | - | chr7_4:15506207-15506226 | None:intergenic | 40.0% | |
| AATTTCACCTGCATCTTTGG+TGG | - | chr7_4:15506265-15506284 | None:intergenic | 40.0% | |
| AGCAATTTCACCTGCATCTT+TGG | - | chr7_4:15506268-15506287 | None:intergenic | 40.0% | |
| AAAGATGCAGGTGAAATTGC+TGG | + | chr7_4:15506267-15506286 | Msa1141870:CDS | 40.0% | |
| ! | GGACTTTGATAACAGAATGG+TGG | + | chr7_4:15506491-15506510 | Msa1141870:CDS | 40.0% |
| GTTGCGAAATTCTTGCGAAA+GGG | + | chr7_4:15506584-15506603 | Msa1141870:CDS | 40.0% | |
| GACATAGATGCTCTATGTCA+AGG | + | chr7_4:15506645-15506664 | Msa1141870:CDS | 40.0% | |
| CTTCTGTTCATCAATCACAC+GGG | + | chr7_4:15506674-15506693 | Msa1141870:CDS | 40.0% | |
| ! | GGACCTCTTTGAAAAGTGTA+TGG | + | chr7_4:15506719-15506738 | Msa1141870:CDS | 40.0% |
| TTGTCTTGCAGATGCTAAGA+TGG | + | chr7_4:15506755-15506774 | Msa1141870:CDS | 40.0% | |
| GTAGATGATGTAGTCCTTGT+TGG | + | chr7_4:15506789-15506808 | Msa1141870:CDS | 40.0% | |
| !! | CTTCTAGGATTCCTAAAGTG+AGG | + | chr7_4:15506817-15506836 | Msa1141870:CDS | 40.0% |
| !! | ACAGGAGTTTTTCAAAGGGA+AGG | + | chr7_4:15506848-15506867 | Msa1141870:CDS | 40.0% |
| TGTTCCAAACTTGGTATTGC+GGG | + | chr7_4:15506956-15506975 | Msa1141870:CDS | 40.0% | |
| GATGTTACTCCTTTGTCACT+TGG | + | chr7_4:15506978-15506997 | Msa1141870:CDS | 40.0% | |
| ! | GTATCGATACCAAGTGACAA+AGG | - | chr7_4:15506990-15507009 | None:intergenic | 40.0% |
| TTATGAGTGTGGTGATTCCT+AGG | + | chr7_4:15507021-15507040 | Msa1141870:CDS | 40.0% | |
| !! | TATTATACCCCTCAGGTTGA+AGG | + | chr7_4:15507077-15507096 | Msa1141870:CDS | 40.0% |
| TTCATTACCTTCAACCTGAG+GGG | - | chr7_4:15507087-15507106 | None:intergenic | 40.0% | |
| AGAGATTGAGAGAATGATCC+AGG | + | chr7_4:15507334-15507353 | Msa1141870:CDS | 40.0% | |
| AAATACGATGGAGTTGCGAT+CGG | + | chr7_4:15505512-15505531 | Msa1141870:CDS | 40.0% | |
| GAATGAACAGAACGATAGAG+TGG | + | chr7_4:15505574-15505593 | Msa1141870:CDS | 40.0% | |
| AAAAGCAACACAAGAAGGAG+TGG | - | chr7_4:15505630-15505649 | None:intergenic | 40.0% | |
| CCAGTAAAAGCAACACAAGA+AGG | - | chr7_4:15505635-15505654 | None:intergenic | 40.0% | |
| !!! | CCTTCTTGTGTTGCTTTTAC+TGG | + | chr7_4:15505632-15505651 | Msa1141870:CDS | 40.0% |
| !! | TACCAAAGACAGTGTTGGTT+GGG | - | chr7_4:15505706-15505725 | None:intergenic | 40.0% |
| !! | TTACCAAAGACAGTGTTGGT+TGG | - | chr7_4:15505707-15505726 | None:intergenic | 40.0% |
| TATACTGTTGTGGCCCTTTA+AGG | + | chr7_4:15506047-15506066 | Msa1141870:CDS | 40.0% | |
| ACACCAGCAATGACCTTAAA+GGG | - | chr7_4:15506063-15506082 | None:intergenic | 40.0% | |
| AACACCAGCAATGACCTTAA+AGG | - | chr7_4:15506064-15506083 | None:intergenic | 40.0% | |
| CGATGATCGTTGTGAAATAC+AGG | + | chr7_4:15506094-15506113 | Msa1141870:CDS | 40.0% | |
| GTAATCACTGCATTCTCAAC+AGG | - | chr7_4:15506207-15506226 | None:intergenic | 40.0% | |
| AATTTCACCTGCATCTTTGG+TGG | - | chr7_4:15506265-15506284 | None:intergenic | 40.0% | |
| AGCAATTTCACCTGCATCTT+TGG | - | chr7_4:15506268-15506287 | None:intergenic | 40.0% | |
| AAAGATGCAGGTGAAATTGC+TGG | + | chr7_4:15506267-15506286 | Msa1141870:CDS | 40.0% | |
| ! | GGACTTTGATAACAGAATGG+TGG | + | chr7_4:15506491-15506510 | Msa1141870:CDS | 40.0% |
| GTTGCGAAATTCTTGCGAAA+GGG | + | chr7_4:15506584-15506603 | Msa1141870:CDS | 40.0% | |
| GACATAGATGCTCTATGTCA+AGG | + | chr7_4:15506645-15506664 | Msa1141870:CDS | 40.0% | |
| CTTCTGTTCATCAATCACAC+GGG | + | chr7_4:15506674-15506693 | Msa1141870:CDS | 40.0% | |
| ! | GGACCTCTTTGAAAAGTGTA+TGG | + | chr7_4:15506719-15506738 | Msa1141870:CDS | 40.0% |
| TTGTCTTGCAGATGCTAAGA+TGG | + | chr7_4:15506755-15506774 | Msa1141870:CDS | 40.0% | |
| GTAGATGATGTAGTCCTTGT+TGG | + | chr7_4:15506789-15506808 | Msa1141870:CDS | 40.0% | |
| !! | CTTCTAGGATTCCTAAAGTG+AGG | + | chr7_4:15506817-15506836 | Msa1141870:CDS | 40.0% |
| !! | ACAGGAGTTTTTCAAAGGGA+AGG | + | chr7_4:15506848-15506867 | Msa1141870:CDS | 40.0% |
| TGTTCCAAACTTGGTATTGC+GGG | + | chr7_4:15506956-15506975 | Msa1141870:CDS | 40.0% | |
| GATGTTACTCCTTTGTCACT+TGG | + | chr7_4:15506978-15506997 | Msa1141870:CDS | 40.0% | |
| ! | GTATCGATACCAAGTGACAA+AGG | - | chr7_4:15506990-15507009 | None:intergenic | 40.0% |
| TTATGAGTGTGGTGATTCCT+AGG | + | chr7_4:15507021-15507040 | Msa1141870:CDS | 40.0% | |
| !! | TATTATACCCCTCAGGTTGA+AGG | + | chr7_4:15507077-15507096 | Msa1141870:CDS | 40.0% |
| TTCATTACCTTCAACCTGAG+GGG | - | chr7_4:15507087-15507106 | None:intergenic | 40.0% | |
| AGAGATTGAGAGAATGATCC+AGG | + | chr7_4:15507334-15507353 | Msa1141870:CDS | 40.0% | |
| CTTACTCTTGCGTTGGAGTA+TGG | + | chr7_4:15505552-15505571 | Msa1141870:CDS | 45.0% | |
| ! | ACTGGAACTCAAAGGTTGGT+TGG | + | chr7_4:15505650-15505669 | Msa1141870:CDS | 45.0% |
| AACCCAACCAACACTGTCTT+TGG | + | chr7_4:15505701-15505720 | Msa1141870:CDS | 45.0% | |
| TTCATCTTTGATCTCGGTGG+TGG | + | chr7_4:15506384-15506403 | Msa1141870:CDS | 45.0% | |
| ! | TTTGAAGTCAAGGCCACTTC+TGG | + | chr7_4:15506447-15506466 | Msa1141870:CDS | 45.0% |
| AGAATTTCGCAACCTCCTCA+AGG | - | chr7_4:15506577-15506596 | None:intergenic | 45.0% | |
| GGTTGCGAAATTCTTGCGAA+AGG | + | chr7_4:15506583-15506602 | Msa1141870:CDS | 45.0% | |
| GATGATGTAGTCCTTGTTGG+TGG | + | chr7_4:15506792-15506811 | Msa1141870:CDS | 45.0% | |
| !! | TCCTTGTTGGTGGTTCTTCT+AGG | + | chr7_4:15506802-15506821 | Msa1141870:CDS | 45.0% |
| TCCTAGAAGAACCACCAACA+AGG | - | chr7_4:15506806-15506825 | None:intergenic | 45.0% | |
| !! | CAAGAGCATTAACCCTGATG+AGG | + | chr7_4:15506878-15506897 | Msa1141870:CDS | 45.0% |
| CATAAGCAACAGCCTCATCA+GGG | - | chr7_4:15506893-15506912 | None:intergenic | 45.0% | |
| ACATCCCGCAATACCAAGTT+TGG | - | chr7_4:15506963-15506982 | None:intergenic | 45.0% | |
| ! | GCAAGTGAGAACAACTTGCT+TGG | + | chr7_4:15507149-15507168 | Msa1141870:CDS | 45.0% |
| CCTTGAAATTGTCAGCTTCC+TGG | - | chr7_4:15507355-15507374 | None:intergenic | 45.0% | |
| CCAGGAAGCTGACAATTTCA+AGG | + | chr7_4:15507352-15507371 | Msa1141870:CDS | 45.0% | |
| ! | TTTGATTGATGGCAACCAGC+AGG | + | chr7_4:15507532-15507551 | Msa1141870:CDS | 45.0% |
| AAACAGACGTATCTTCCTGC+TGG | - | chr7_4:15507550-15507569 | None:intergenic | 45.0% | |
| CTTACTCTTGCGTTGGAGTA+TGG | + | chr7_4:15505552-15505571 | Msa1141870:CDS | 45.0% | |
| ! | ACTGGAACTCAAAGGTTGGT+TGG | + | chr7_4:15505650-15505669 | Msa1141870:CDS | 45.0% |
| AACCCAACCAACACTGTCTT+TGG | + | chr7_4:15505701-15505720 | Msa1141870:CDS | 45.0% | |
| TTCATCTTTGATCTCGGTGG+TGG | + | chr7_4:15506384-15506403 | Msa1141870:CDS | 45.0% | |
| ! | TTTGAAGTCAAGGCCACTTC+TGG | + | chr7_4:15506447-15506466 | Msa1141870:CDS | 45.0% |
| AGAATTTCGCAACCTCCTCA+AGG | - | chr7_4:15506577-15506596 | None:intergenic | 45.0% | |
| GGTTGCGAAATTCTTGCGAA+AGG | + | chr7_4:15506583-15506602 | Msa1141870:CDS | 45.0% | |
| GATGATGTAGTCCTTGTTGG+TGG | + | chr7_4:15506792-15506811 | Msa1141870:CDS | 45.0% | |
| !! | TCCTTGTTGGTGGTTCTTCT+AGG | + | chr7_4:15506802-15506821 | Msa1141870:CDS | 45.0% |
| TCCTAGAAGAACCACCAACA+AGG | - | chr7_4:15506806-15506825 | None:intergenic | 45.0% | |
| !! | CAAGAGCATTAACCCTGATG+AGG | + | chr7_4:15506878-15506897 | Msa1141870:CDS | 45.0% |
| CATAAGCAACAGCCTCATCA+GGG | - | chr7_4:15506893-15506912 | None:intergenic | 45.0% | |
| ACATCCCGCAATACCAAGTT+TGG | - | chr7_4:15506963-15506982 | None:intergenic | 45.0% | |
| ! | GCAAGTGAGAACAACTTGCT+TGG | + | chr7_4:15507149-15507168 | Msa1141870:CDS | 45.0% |
| CCTTGAAATTGTCAGCTTCC+TGG | - | chr7_4:15507355-15507374 | None:intergenic | 45.0% | |
| CCAGGAAGCTGACAATTTCA+AGG | + | chr7_4:15507352-15507371 | Msa1141870:CDS | 45.0% | |
| ! | TTTGATTGATGGCAACCAGC+AGG | + | chr7_4:15507532-15507551 | Msa1141870:CDS | 45.0% |
| AAACAGACGTATCTTCCTGC+TGG | - | chr7_4:15507550-15507569 | None:intergenic | 45.0% | |
| !! | AAATGAAATTAAATTTAAAA+GGG | - | chr7_4:15505820-15505839 | None:intergenic | 5.0% |
| !! | AAAATGAAATTAAATTTAAA+AGG | - | chr7_4:15505821-15505840 | None:intergenic | 5.0% |
| !! | AAATGAAATTAAATTTAAAA+GGG | - | chr7_4:15505820-15505839 | None:intergenic | 5.0% |
| !! | AAAATGAAATTAAATTTAAA+AGG | - | chr7_4:15505821-15505840 | None:intergenic | 5.0% |
| GTTGCGATCGGAATTGACCT+TGG | + | chr7_4:15505524-15505543 | Msa1141870:CDS | 50.0% | |
| CGCAAGAGTAAGTCGTTCCA+AGG | - | chr7_4:15505544-15505563 | None:intergenic | 50.0% | |
| GGAACGACTTACTCTTGCGT+TGG | + | chr7_4:15505545-15505564 | Msa1141870:CDS | 50.0% | |
| !! | GACAGTGTTGGTTGGGTTAG+AGG | - | chr7_4:15505699-15505718 | None:intergenic | 50.0% |
| !! | TGGCCCTTTAAGGTCATTGC+TGG | + | chr7_4:15506057-15506076 | Msa1141870:CDS | 50.0% |
| CGTTGTGAAATACAGGGGCA+AGG | + | chr7_4:15506101-15506120 | Msa1141870:CDS | 50.0% | |
| AGAAGAGCCACCAAAGATGC+AGG | + | chr7_4:15506255-15506274 | Msa1141870:CDS | 50.0% | |
| TATGCAAGAGCAGCTGCAGT+TGG | - | chr7_4:15506321-15506340 | None:intergenic | 50.0% | |
| ACTGCAGCTGCTCTTGCATA+TGG | + | chr7_4:15506321-15506340 | Msa1141870:CDS | 50.0% | |
| ! | ACTTCTGGAGACACACACCT+CGG | + | chr7_4:15506462-15506481 | Msa1141870:CDS | 50.0% |
| TATCAAAGTCCTCTCCTCCG+AGG | - | chr7_4:15506482-15506501 | None:intergenic | 50.0% | |
| GGACGCCACTAATGTCAACT+TGG | - | chr7_4:15506548-15506567 | None:intergenic | 50.0% | |
| ! | GCAACCTCCTCAAGGCTTTT+GGG | - | chr7_4:15506569-15506588 | None:intergenic | 50.0% |
| CCATAAGCAACAGCCTCATC+AGG | - | chr7_4:15506894-15506913 | None:intergenic | 50.0% | |
| ! | CCTGATGAGGCTGTTGCTTA+TGG | + | chr7_4:15506891-15506910 | Msa1141870:CDS | 50.0% |
| CTTCACCAAGCAAAACAGCC+TGG | - | chr7_4:15506926-15506945 | None:intergenic | 50.0% | |
| ATACTGTGAGAGGAAGCCCA+CGG | - | chr7_4:15507205-15507224 | None:intergenic | 50.0% | |
| TCTGCAGTGGAAGAAACCAG+TGG | + | chr7_4:15507260-15507279 | Msa1141870:CDS | 50.0% | |
| GTTGCGATCGGAATTGACCT+TGG | + | chr7_4:15505524-15505543 | Msa1141870:CDS | 50.0% | |
| CGCAAGAGTAAGTCGTTCCA+AGG | - | chr7_4:15505544-15505563 | None:intergenic | 50.0% | |
| GGAACGACTTACTCTTGCGT+TGG | + | chr7_4:15505545-15505564 | Msa1141870:CDS | 50.0% | |
| !! | GACAGTGTTGGTTGGGTTAG+AGG | - | chr7_4:15505699-15505718 | None:intergenic | 50.0% |
| !! | TGGCCCTTTAAGGTCATTGC+TGG | + | chr7_4:15506057-15506076 | Msa1141870:CDS | 50.0% |
| CGTTGTGAAATACAGGGGCA+AGG | + | chr7_4:15506101-15506120 | Msa1141870:CDS | 50.0% | |
| AGAAGAGCCACCAAAGATGC+AGG | + | chr7_4:15506255-15506274 | Msa1141870:CDS | 50.0% | |
| TATGCAAGAGCAGCTGCAGT+TGG | - | chr7_4:15506321-15506340 | None:intergenic | 50.0% | |
| ACTGCAGCTGCTCTTGCATA+TGG | + | chr7_4:15506321-15506340 | Msa1141870:CDS | 50.0% | |
| ! | ACTTCTGGAGACACACACCT+CGG | + | chr7_4:15506462-15506481 | Msa1141870:CDS | 50.0% |
| TATCAAAGTCCTCTCCTCCG+AGG | - | chr7_4:15506482-15506501 | None:intergenic | 50.0% | |
| GGACGCCACTAATGTCAACT+TGG | - | chr7_4:15506548-15506567 | None:intergenic | 50.0% | |
| ! | GCAACCTCCTCAAGGCTTTT+GGG | - | chr7_4:15506569-15506588 | None:intergenic | 50.0% |
| CCATAAGCAACAGCCTCATC+AGG | - | chr7_4:15506894-15506913 | None:intergenic | 50.0% | |
| ! | CCTGATGAGGCTGTTGCTTA+TGG | + | chr7_4:15506891-15506910 | Msa1141870:CDS | 50.0% |
| CTTCACCAAGCAAAACAGCC+TGG | - | chr7_4:15506926-15506945 | None:intergenic | 50.0% | |
| ATACTGTGAGAGGAAGCCCA+CGG | - | chr7_4:15507205-15507224 | None:intergenic | 50.0% | |
| TCTGCAGTGGAAGAAACCAG+TGG | + | chr7_4:15507260-15507279 | Msa1141870:CDS | 50.0% | |
| GAGGTGTGTGTCTCCAGAAG+TGG | - | chr7_4:15506463-15506482 | None:intergenic | 55.0% | |
| ! | CGCAACCTCCTCAAGGCTTT+TGG | - | chr7_4:15506570-15506589 | None:intergenic | 55.0% |
| TGCTTATGGTGCAGCTGTCC+AGG | + | chr7_4:15506905-15506924 | Msa1141870:CDS | 55.0% | |
| !! | GCTGTCCAGGCTGTTTTGCT+TGG | + | chr7_4:15506918-15506937 | Msa1141870:CDS | 55.0% |
| AAAGTTCCTCTTGCTCCCCG+TGG | + | chr7_4:15507185-15507204 | Msa1141870:CDS | 55.0% | |
| AAGTTCCTCTTGCTCCCCGT+GGG | + | chr7_4:15507186-15507205 | Msa1141870:CDS | 55.0% | |
| TACTGTGAGAGGAAGCCCAC+GGG | - | chr7_4:15507204-15507223 | None:intergenic | 55.0% | |
| GAGGTGTGTGTCTCCAGAAG+TGG | - | chr7_4:15506463-15506482 | None:intergenic | 55.0% | |
| ! | CGCAACCTCCTCAAGGCTTT+TGG | - | chr7_4:15506570-15506589 | None:intergenic | 55.0% |
| TGCTTATGGTGCAGCTGTCC+AGG | + | chr7_4:15506905-15506924 | Msa1141870:CDS | 55.0% | |
| !! | GCTGTCCAGGCTGTTTTGCT+TGG | + | chr7_4:15506918-15506937 | Msa1141870:CDS | 55.0% |
| AAAGTTCCTCTTGCTCCCCG+TGG | + | chr7_4:15507185-15507204 | Msa1141870:CDS | 55.0% | |
| AAGTTCCTCTTGCTCCCCGT+GGG | + | chr7_4:15507186-15507205 | Msa1141870:CDS | 55.0% | |
| TACTGTGAGAGGAAGCCCAC+GGG | - | chr7_4:15507204-15507223 | None:intergenic | 55.0% | |
| TCTGGAGACACACACCTCGG+AGG | + | chr7_4:15506465-15506484 | Msa1141870:CDS | 60.0% | |
| AGACACACACCTCGGAGGAG+AGG | + | chr7_4:15506470-15506489 | Msa1141870:CDS | 60.0% | |
| GTGGCGTCCCAAAAGCCTTG+AGG | + | chr7_4:15506559-15506578 | Msa1141870:CDS | 60.0% | |
| GCGTCCCAAAAGCCTTGAGG+AGG | + | chr7_4:15506562-15506581 | Msa1141870:CDS | 60.0% | |
| ACTGTGAGAGGAAGCCCACG+GGG | - | chr7_4:15507203-15507222 | None:intergenic | 60.0% | |
| TCTGGAGACACACACCTCGG+AGG | + | chr7_4:15506465-15506484 | Msa1141870:CDS | 60.0% | |
| AGACACACACCTCGGAGGAG+AGG | + | chr7_4:15506470-15506489 | Msa1141870:CDS | 60.0% | |
| GTGGCGTCCCAAAAGCCTTG+AGG | + | chr7_4:15506559-15506578 | Msa1141870:CDS | 60.0% | |
| GCGTCCCAAAAGCCTTGAGG+AGG | + | chr7_4:15506562-15506581 | Msa1141870:CDS | 60.0% | |
| ACTGTGAGAGGAAGCCCACG+GGG | - | chr7_4:15507203-15507222 | None:intergenic | 60.0% | |
| GGAAGCCCACGGGGAGCAAG+AGG | - | chr7_4:15507194-15507213 | None:intergenic | 70.0% | |
| GGAAGCCCACGGGGAGCAAG+AGG | - | chr7_4:15507194-15507213 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 15505503 | 15507667 | 15505503 | ID=Msa1141870;Name=Msa1141870 |
| chr7_4 | mRNA | 15505503 | 15507667 | 15505503 | ID=Msa1141870-mRNA-1;Parent=Msa1141870;Name=Msa1141870-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|2|0|630 |
| chr7_4 | exon | 15505503 | 15505722 | 15505503 | ID=Msa1141870-mRNA-1:exon:3555;Parent=Msa1141870-mRNA-1 |
| chr7_4 | exon | 15505995 | 15507667 | 15505995 | ID=Msa1141870-mRNA-1:exon:3556;Parent=Msa1141870-mRNA-1 |
| chr7_4 | CDS | 15505503 | 15505722 | 15505503 | ID=Msa1141870-mRNA-1:cds;Parent=Msa1141870-mRNA-1 |
| chr7_4 | CDS | 15505995 | 15507667 | 15505995 | ID=Msa1141870-mRNA-1:cds;Parent=Msa1141870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
