AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0968850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968850 MtrunA17_Chr7g0264421 84.987 373 21 4 1 367 1 344 0.0 608
Msa0968850 MtrunA17_Chr2g0329701 72.637 402 41 9 5 367 3 374 0.0 547
Msa0968850 MtrunA17_Chr6g0451411 48.113 318 144 4 60 364 4 313 1.64e-84 259
Msa0968850 MtrunA17_Chr6g0451421 56.429 140 61 0 225 364 6 145 2.64e-47 157
Msa0968850 MtrunA17_Chr2g0325301 51.064 141 69 0 225 365 8 148 4.22e-46 154
Msa0968850 MtrunA17_Chr6g0451441 46.667 150 72 1 225 366 318 467 1.97e-33 129
Msa0968850 MtrunA17_Chr6g0451391 51.765 85 40 1 59 142 3 87 2.03e-21 87.8
Msa0968850 MtrunA17_Chr6g0451451 50.000 84 42 0 281 364 1 84 3.58e-19 81.3
Msa0968850 MtrunA17_Chr1g0158081 35.246 122 77 1 232 353 1211 1330 1.34e-12 69.3
Msa0968850 MtrunA17_Chr3g0110591 34.426 122 78 1 232 353 27 146 1.93e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968850 AT1G24090.1 50.789 317 123 4 47 362 67 351 6.62e-103 308
Msa0968850 AT3G01410.2 47.213 305 138 2 59 362 7 289 2.69e-95 286
Msa0968850 AT3G01410.1 47.213 305 138 2 59 362 7 289 2.69e-95 286
Msa0968850 AT5G51080.3 47.525 303 100 3 60 362 14 257 1.01e-92 278
Msa0968850 AT5G51080.1 47.195 303 101 4 60 362 77 320 3.86e-90 274
Msa0968850 AT5G51080.2 47.195 303 101 4 60 362 77 320 3.86e-90 274

Find 125 sgRNAs with CRISPR-Local

Find 788 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCATTGTTCTTTCATTTAT+CGG 0.179394 6_4:-233973 Msa0968850:three_prime_UTR
TTCATTCGTAGCACAGTTAA+TGG 0.214307 6_4:-234042 Msa0968850:three_prime_UTR
TTATTACTTTAAAGATTTAT+AGG 0.222165 6_4:-237019 Msa0968850:intron
CACAGTTAATGGTTATGTTT+TGG 0.248150 6_4:-234031 Msa0968850:three_prime_UTR
AATGTTGGGAGCCCAGTTTC+TGG 0.257587 6_4:-239545 None:intergenic
GCGATCCAAAGATGGGAATT+TGG 0.263913 6_4:-237109 Msa0968850:intron
ACTTGTTCCTTGTCCTTTCC+AGG 0.265276 6_4:-239036 Msa0968850:intron
AAATTTATCCTTGAGTTCTT+TGG 0.265369 6_4:+235126 None:intergenic
TCCAGATCAGTCATGTTCTA+AGG 0.275631 6_4:-235096 Msa0968850:CDS
AAAATCCAACTTCAGGCTAA+TGG 0.289060 6_4:+233670 None:intergenic
GTGTACCAAATTCCCATCTT+TGG 0.297445 6_4:+237104 None:intergenic
GAACTTGTTTACATTGTATA+AGG 0.306897 6_4:-235152 Msa0968850:CDS
TATTACTTTAAAGATTTATA+GGG 0.318861 6_4:-237018 Msa0968850:intron
TGAATATCGTGCAATGATAT+TGG 0.323327 6_4:-236958 Msa0968850:CDS
TGTAATTGTTCTTCGGAGTA+TGG 0.325632 6_4:+239406 None:intergenic
GAGCCCAGTTTCTGGTTCAT+TGG 0.336662 6_4:-239537 Msa0968850:five_prime_UTR
AGAACCAATGAACCAGAAAC+TGG 0.352708 6_4:+239533 None:intergenic
GGCTGCAACGCCGACACAGC+TGG 0.369929 6_4:+233808 None:intergenic
TTCTACAGATGGCCAAGTTC+AGG 0.372365 6_4:-234082 Msa0968850:intron
TACTGATACAAGCTAGGTAT+TGG 0.380162 6_4:-233844 Msa0968850:three_prime_UTR
TATCCCTTGTATACACTAAC+AGG 0.385152 6_4:+239161 None:intergenic
TATCACTGTTCATGACCATT+TGG 0.385381 6_4:-233893 Msa0968850:three_prime_UTR
AAATCCAACTTCAGGCTAAT+GGG 0.390580 6_4:+233671 None:intergenic
TGTCCGTATCCGTGCTTCAT+AGG 0.392241 6_4:-233750 Msa0968850:three_prime_UTR
AAATTCCCCAACAGATCGTT+AGG 0.399114 6_4:-239478 Msa0968850:five_prime_UTR
GGCAGAACACCTTCAATATA+CGG 0.402955 6_4:-234002 Msa0968850:three_prime_UTR
AAATCATAAAATCCAACTTC+AGG 0.404779 6_4:+233663 None:intergenic
GTCCCCTTGTATACAGATAT+TGG 0.408696 6_4:+236905 None:intergenic
AATTTAGCCATCCAACTTGC+TGG 0.418826 6_4:-234200 Msa0968850:intron
CAATACTCTCACTCATTCTC+AGG 0.421423 6_4:-239213 Msa0968850:CDS
TGATGCCCTAACGATCTGTT+GGG 0.425945 6_4:+239472 None:intergenic
ATTGCTTAGCAGAAAGCAAC+TGG 0.427524 6_4:-238107 Msa0968850:intron
TCGGAGTTGTAATTGTTCTT+CGG 0.429989 6_4:+239399 None:intergenic
GATTCCCATTAGCCTGAAGT+TGG 0.434391 6_4:-233675 Msa0968850:three_prime_UTR
GAATATCGTGCAATGATATT+GGG 0.438564 6_4:-236957 Msa0968850:CDS
GAGTTCGATGGTGCTTCAAA+AGG 0.439569 6_4:-237165 Msa0968850:CDS
CTACATACTCCTCCTGAACT+TGG 0.440557 6_4:+234070 None:intergenic
ACGGAAGAGGAAAGCGGCGG+CGG 0.444318 6_4:+239509 None:intergenic
AAGGTACTCTTCGATTTCGT+TGG 0.444401 6_4:+239130 None:intergenic
TTCGGAGTATGGTAGGGAGG+TGG 0.454305 6_4:+239417 None:intergenic
CCCTTAGAACATGACTGATC+TGG 0.455880 6_4:+235095 None:intergenic
CGGAAGAGGAAAGCGGCGGC+GGG 0.457268 6_4:+239510 None:intergenic
GTCAGTGTCCGTGTCGTGTT+CGG 0.462792 6_4:-233779 Msa0968850:three_prime_UTR
TGAAACAGATTGATGGTTCA+TGG 0.464989 6_4:-235189 Msa0968850:intron
AATCCTGGAAAAGCTGGTGC+TGG 0.465766 6_4:-237141 Msa0968850:CDS
GCTATTCTGCGATCCAAAGA+TGG 0.468080 6_4:-237117 Msa0968850:CDS
AGCTGAAACGACGATGGATC+AGG 0.469871 6_4:-239294 Msa0968850:CDS
CTCTTCGATTTCGTTGGACA+TGG 0.470828 6_4:+239136 None:intergenic
TTCAAAACGGTTCGTTCTTG+AGG 0.477651 6_4:+233925 None:intergenic
GACAAGAGTCCGTATATTGA+AGG 0.481991 6_4:+233993 None:intergenic
TTGATGCCCTAACGATCTGT+TGG 0.486287 6_4:+239471 None:intergenic
GGTGCTTCAAAAGGAAATCC+TGG 0.486324 6_4:-237156 Msa0968850:CDS
ATCCTGGAAAAGCTGGTGCT+GGG 0.491060 6_4:-237140 Msa0968850:CDS
AGAAGAATGATGTGATTTGA+AGG 0.497424 6_4:+239370 None:intergenic
TAACTTGACTTGCTTTCTCA+AGG 0.499915 6_4:+237992 None:intergenic
TAACTTGACTTGCTTTCTCA+AGG 0.499915 6_4:+238061 None:intergenic
GTGAGGAAAGGGGATGTTGT+TGG 0.501553 6_4:-239242 Msa0968850:CDS
GACTAGAAAACATAACCAAA+TGG 0.503583 6_4:+233878 None:intergenic
TGCTGCATGAAACAGATTGA+TGG 0.504540 6_4:-235196 Msa0968850:intron
AAAGGAAATCCTGGAAAAGC+TGG 0.513026 6_4:-237147 Msa0968850:CDS
TCCTCCTGTTAGTGTATACA+AGG 0.513712 6_4:-239165 Msa0968850:CDS
ATTGTTCTTCGGAGTATGGT+AGG 0.513909 6_4:+239410 None:intergenic
TGTGATTTGAAGGTGTTCTT+CGG 0.514394 6_4:+239380 None:intergenic
CTCTAAACTTGTGTGCATGC+AGG 0.515939 6_4:-236883 Msa0968850:intron
CACCGACACCGAACACGACA+CGG 0.516679 6_4:+233771 None:intergenic
GACACGGACACTGACACGGC+TGG 0.519062 6_4:+233787 None:intergenic
AAACTGGTATTTACCTGGAA+AGG 0.524472 6_4:+239023 None:intergenic
TCGGAGTATGGTAGGGAGGT+GGG 0.526814 6_4:+239418 None:intergenic
TCAACAGCAGCCAGCTGTGT+CGG 0.527534 6_4:-233818 Msa0968850:three_prime_UTR
AAGTTAGATCGTACTGCTGT+GGG 0.528807 6_4:-237975 Msa0968850:CDS
AAGTTAGATCGTACTGCTGT+GGG 0.528807 6_4:-238044 Msa0968850:CDS
TTCACCAATATCTGTATACA+AGG 0.532845 6_4:-236909 Msa0968850:CDS
ACTCATTCTCAGGCTCAAGT+TGG 0.533797 6_4:-239203 Msa0968850:CDS
TATAGGGTTCGTGAAGGTGT+GGG 0.534380 6_4:-237002 Msa0968850:CDS
TGGATCAGGAAAATAATGAA+AGG 0.535544 6_4:-239280 Msa0968850:CDS
GTCCGTGTCGTGTTCGGTGT+CGG 0.535770 6_4:-233773 Msa0968850:three_prime_UTR
TGAAAGCCTCACCAGCAAGT+TGG 0.538103 6_4:+234189 None:intergenic
AATTTCTACAAGAACGGAAG+AGG 0.544843 6_4:+239496 None:intergenic
GGATCAGGAAAATAATGAAA+GGG 0.544982 6_4:-239279 Msa0968850:CDS
TTACCTATGAAGCACGGATA+CGG 0.547194 6_4:+233747 None:intergenic
CTTGTTTACATTGTATAAGG+TGG 0.549164 6_4:-235149 Msa0968850:CDS
TTGTTCTTCGGAGTATGGTA+GGG 0.549864 6_4:+239411 None:intergenic
CAAATCCTCTTTAAAATCAG+AGG 0.550441 6_4:+239067 None:intergenic
CTATTCTGCGATCCAAAGAT+GGG 0.557320 6_4:-237116 Msa0968850:CDS
AACTTGACTTGCTTTCTCAA+GGG 0.557807 6_4:+237993 None:intergenic
AACTTGACTTGCTTTCTCAA+GGG 0.557807 6_4:+238062 None:intergenic
CCAGATCAGTCATGTTCTAA+GGG 0.561463 6_4:-235095 Msa0968850:intron
ACTTGTATTGTTGAGTTCGA+TGG 0.562087 6_4:-237177 Msa0968850:CDS
CAATACAAGTCTTCTGTGCA+AGG 0.564324 6_4:+237190 None:intergenic
CAAGTTAGATCGTACTGCTG+TGG 0.567290 6_4:-237976 Msa0968850:CDS
CAAGTTAGATCGTACTGCTG+TGG 0.567290 6_4:-238045 Msa0968850:CDS
TTATAGGGTTCGTGAAGGTG+TGG 0.569284 6_4:-237003 Msa0968850:CDS
TCTTTAGTCCATGCGAGAGA+AGG 0.570205 6_4:+239111 None:intergenic
TAAGGTGGCCAAAGAACTCA+AGG 0.571307 6_4:-235134 Msa0968850:CDS
TTGGGGAATTTCTACAAGAA+CGG 0.572545 6_4:+239490 None:intergenic
AGATGTATCTGAATTTGATG+TGG 0.582284 6_4:+238737 None:intergenic
GATGTATCTGAATTTGATGT+GGG 0.582622 6_4:+238738 None:intergenic
ATGGTCATGAACAGTGATAG+AGG 0.583259 6_4:+233897 None:intergenic
GATAGAGGACTAGTTCAAAA+CGG 0.588573 6_4:+233912 None:intergenic
CAAGTTCAGGAGGAGTATGT+AGG 0.588584 6_4:-234069 Msa0968850:CDS
AGCCTCACCAGCAAGTTGGA+TGG 0.598266 6_4:+234193 None:intergenic
GAAGAGTACCTTCTCTCGCA+TGG 0.600732 6_4:-239119 Msa0968850:CDS
ACACGACACGGACACTGACA+CGG 0.601594 6_4:+233783 None:intergenic
ATTTGCTTGAGCATCAGCCT+CGG 0.603191 6_4:+234220 None:intergenic
AATTCCCCAACAGATCGTTA+GGG 0.604911 6_4:-239477 Msa0968850:five_prime_UTR
AAGATTTATAGGGTTCGTGA+AGG 0.607171 6_4:-237008 Msa0968850:CDS
TCCTGGAAAAGCTGGTGCTG+GGG 0.612018 6_4:-237139 Msa0968850:CDS
TACAGATGGCCAAGTTCAGG+AGG 0.612858 6_4:-234079 Msa0968850:intron
TTCTTCGGAGTATGGTAGGG+AGG 0.614386 6_4:+239414 None:intergenic
GATGCCCTAACGATCTGTTG+GGG 0.615103 6_4:+239473 None:intergenic
AATGAAAGCTGAAACGACGA+TGG 0.616826 6_4:-239300 Msa0968850:CDS
ACAGATTGATGGTTCATGGA+AGG 0.616975 6_4:-235185 Msa0968850:intron
CACCAATATCTGTATACAAG+GGG 0.622106 6_4:-236907 Msa0968850:CDS
GAACCAATGAACCAGAAACT+GGG 0.628554 6_4:+239534 None:intergenic
TTACATTATTAAACTCAACA+TGG 0.651918 6_4:-233515 Msa0968850:three_prime_UTR
TTGTATCAGTAAAACTACAT+TGG 0.656547 6_4:+233856 None:intergenic
GTATTTACCTGGAAAGGACA+AGG 0.661406 6_4:+239029 None:intergenic
TCACCAATATCTGTATACAA+GGG 0.666855 6_4:-236908 Msa0968850:CDS
CCCTTGTATACACTAACAGG+AGG 0.673763 6_4:+239164 None:intergenic
TAAAGATTACCTATGAAGCA+CGG 0.676845 6_4:+233741 None:intergenic
AGTGCTTGAACAAGATGATG+TGG 0.682163 6_4:-238697 Msa0968850:intron
CCTCCTGTTAGTGTATACAA+GGG 0.682234 6_4:-239164 Msa0968850:CDS
AGAACGGAAGAGGAAAGCGG+CGG 0.693868 6_4:+239506 None:intergenic
TGTCAAGAACTTCAACTCCG+AGG 0.697912 6_4:-234237 Msa0968850:intron
ACAAGAACGGAAGAGGAAAG+CGG 0.702590 6_4:+239503 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTACTTTAAAGATTTAT+AGG - chr6_4:235987-236006 Msa0968850:intron 10.0%
!!! TATTACTTTAAAGATTTATA+GGG - chr6_4:235988-236007 Msa0968850:intron 10.0%
!!! ATAACTTTATATTTTATACA+CGG + chr6_4:236303-236322 None:intergenic 10.0%
!!! AACATACTTAATATTTTTAA+AGG + chr6_4:236802-236821 None:intergenic 10.0%
!! TACTATATATCATAAAATAA+CGG - chr6_4:237545-237564 Msa0968850:intron 10.0%
!!! GCTTAAAAATAAATATATTT+TGG + chr6_4:238302-238321 None:intergenic 10.0%
!! AATCAAAAAATAATCTTTAA+GGG + chr6_4:239539-239558 None:intergenic 10.0%
!!! TTATTACTTTAAAGATTTAT+AGG - chr6_4:235987-236006 Msa0968850:intron 10.0%
!!! TATTACTTTAAAGATTTATA+GGG - chr6_4:235988-236007 Msa0968850:intron 10.0%
!!! ATAACTTTATATTTTATACA+CGG + chr6_4:236303-236322 None:intergenic 10.0%
!!! AACATACTTAATATTTTTAA+AGG + chr6_4:236802-236821 None:intergenic 10.0%
!! TACTATATATCATAAAATAA+CGG - chr6_4:237545-237564 Msa0968850:intron 10.0%
!!! GCTTAAAAATAAATATATTT+TGG + chr6_4:238302-238321 None:intergenic 10.0%
!! AATCAAAAAATAATCTTTAA+GGG + chr6_4:239539-239558 None:intergenic 10.0%
!! TTGTAAATTTGTAATTAAGA+AGG + chr6_4:234076-234095 None:intergenic 15.0%
!!! AAGTTATTTTAACACAAAAT+AGG + chr6_4:234109-234128 None:intergenic 15.0%
!! AAATACCAATATTTGAAAAT+AGG - chr6_4:234651-234670 Msa0968850:intron 15.0%
!! TTCTAATTATTAATGTAAAC+AGG - chr6_4:234698-234717 Msa0968850:intron 15.0%
!! AAAATAGAGAAGAATATAAA+TGG + chr6_4:236153-236172 None:intergenic 15.0%
!!! TATGATATATAGTAGATTTT+TGG + chr6_4:237539-237558 None:intergenic 15.0%
!!! ATAGTGATTTTATTCTATTT+TGG + chr6_4:237676-237695 None:intergenic 15.0%
!!! AAAACAAATCTTTTAAGAAA+AGG + chr6_4:238110-238129 None:intergenic 15.0%
!! AATTTGAACTTGATTATAAT+AGG + chr6_4:238331-238350 None:intergenic 15.0%
!!! ATTTTATGATTTTCATTCTT+GGG - chr6_4:239354-239373 Msa0968850:CDS 15.0%
!! CAATCAAAAAATAATCTTTA+AGG + chr6_4:239540-239559 None:intergenic 15.0%
!! TTGTAAATTTGTAATTAAGA+AGG + chr6_4:234076-234095 None:intergenic 15.0%
!!! AAGTTATTTTAACACAAAAT+AGG + chr6_4:234109-234128 None:intergenic 15.0%
!! AAATACCAATATTTGAAAAT+AGG - chr6_4:234651-234670 Msa0968850:intron 15.0%
!! TTCTAATTATTAATGTAAAC+AGG - chr6_4:234698-234717 Msa0968850:intron 15.0%
!! AAAATAGAGAAGAATATAAA+TGG + chr6_4:236153-236172 None:intergenic 15.0%
!!! TATGATATATAGTAGATTTT+TGG + chr6_4:237539-237558 None:intergenic 15.0%
!!! ATAGTGATTTTATTCTATTT+TGG + chr6_4:237676-237695 None:intergenic 15.0%
!!! AAAACAAATCTTTTAAGAAA+AGG + chr6_4:238110-238129 None:intergenic 15.0%
!! AATTTGAACTTGATTATAAT+AGG + chr6_4:238331-238350 None:intergenic 15.0%
!!! ATTTTATGATTTTCATTCTT+GGG - chr6_4:239354-239373 Msa0968850:CDS 15.0%
!! CAATCAAAAAATAATCTTTA+AGG + chr6_4:239540-239559 None:intergenic 15.0%
!! TAATTGCAGATACATAATAA+TGG + chr6_4:234386-234405 None:intergenic 20.0%
!! ACAGCAAAAGAAAAAAAAAA+TGG - chr6_4:234609-234628 Msa0968850:intron 20.0%
!!! CTTTTCCTATTTTCAAATAT+TGG + chr6_4:234659-234678 None:intergenic 20.0%
!! AAATAGGAAAAGTGAAAATT+AGG - chr6_4:234667-234686 Msa0968850:intron 20.0%
!! TTTACAGATTAAAATATCCA+TGG + chr6_4:235194-235213 None:intergenic 20.0%
!!! TGTAATCTTTTCCTTATTTT+TGG - chr6_4:236258-236277 Msa0968850:intron 20.0%
!! AAATGTTCAATCCAAAAATA+AGG + chr6_4:236272-236291 None:intergenic 20.0%
!!! TTTTTGTACACAGAATTTAA+TGG + chr6_4:236618-236637 None:intergenic 20.0%
!!! TACACTTATGATTTTAACTT+GGG + chr6_4:236861-236880 None:intergenic 20.0%
!!! ATACACTTATGATTTTAACT+TGG + chr6_4:236862-236881 None:intergenic 20.0%
!!! TTAATGATGTAGTTATTTTG+TGG - chr6_4:236919-236938 Msa0968850:CDS 20.0%
!!! AGATATTTTATACGTCATAT+CGG - chr6_4:237319-237338 Msa0968850:intron 20.0%
!!! AAAAACATCTTATTTCATCT+AGG - chr6_4:237398-237417 Msa0968850:intron 20.0%
!! ATTATTCTACATCAGAAATA+AGG + chr6_4:237441-237460 None:intergenic 20.0%
!!! AGTTTTAACAAATGATAGAA+CGG - chr6_4:237700-237719 Msa0968850:intron 20.0%
!!! TCTTGCAAATTATCTAAAAT+AGG - chr6_4:238008-238027 Msa0968850:CDS 20.0%
!!! TATTAACTGTTTTTCCTTTT+AGG - chr6_4:238601-238620 Msa0968850:intron 20.0%
!! TTAAACAAATGATTCCTAAA+AGG + chr6_4:238618-238637 None:intergenic 20.0%
!!! AACTTTTCAAATTTTGTCAA+AGG - chr6_4:239295-239314 Msa0968850:CDS 20.0%
!!! GATTTTATGATTTTCATTCT+TGG - chr6_4:239353-239372 Msa0968850:CDS 20.0%
!!! TTTTATGATTTTCATTCTTG+GGG - chr6_4:239355-239374 Msa0968850:CDS 20.0%
!! TTACATTATTAAACTCAACA+TGG - chr6_4:239491-239510 Msa0968850:five_prime_UTR 20.0%
!! TAATTGCAGATACATAATAA+TGG + chr6_4:234386-234405 None:intergenic 20.0%
!!! CTTTTCCTATTTTCAAATAT+TGG + chr6_4:234659-234678 None:intergenic 20.0%
!! AAATAGGAAAAGTGAAAATT+AGG - chr6_4:234667-234686 Msa0968850:intron 20.0%
!! TTTACAGATTAAAATATCCA+TGG + chr6_4:235194-235213 None:intergenic 20.0%
!!! TGTAATCTTTTCCTTATTTT+TGG - chr6_4:236258-236277 Msa0968850:intron 20.0%
!! AAATGTTCAATCCAAAAATA+AGG + chr6_4:236272-236291 None:intergenic 20.0%
!!! TTTTTGTACACAGAATTTAA+TGG + chr6_4:236618-236637 None:intergenic 20.0%
!!! TACACTTATGATTTTAACTT+GGG + chr6_4:236861-236880 None:intergenic 20.0%
!!! ATACACTTATGATTTTAACT+TGG + chr6_4:236862-236881 None:intergenic 20.0%
!!! TTAATGATGTAGTTATTTTG+TGG - chr6_4:236919-236938 Msa0968850:CDS 20.0%
!!! AGATATTTTATACGTCATAT+CGG - chr6_4:237319-237338 Msa0968850:intron 20.0%
!!! AAAAACATCTTATTTCATCT+AGG - chr6_4:237398-237417 Msa0968850:intron 20.0%
!! ATTATTCTACATCAGAAATA+AGG + chr6_4:237441-237460 None:intergenic 20.0%
!!! AGTTTTAACAAATGATAGAA+CGG - chr6_4:237700-237719 Msa0968850:intron 20.0%
!!! TCTTGCAAATTATCTAAAAT+AGG - chr6_4:238008-238027 Msa0968850:CDS 20.0%
!!! TATTAACTGTTTTTCCTTTT+AGG - chr6_4:238601-238620 Msa0968850:intron 20.0%
!! TTAAACAAATGATTCCTAAA+AGG + chr6_4:238618-238637 None:intergenic 20.0%
!!! GATTTTATGATTTTCATTCT+TGG - chr6_4:239353-239372 Msa0968850:CDS 20.0%
!!! TTTTATGATTTTCATTCTTG+GGG - chr6_4:239355-239374 Msa0968850:CDS 20.0%
!! TTACATTATTAAACTCAACA+TGG - chr6_4:239491-239510 Msa0968850:five_prime_UTR 20.0%
!!! TTTCGTAGTTTATTTTCTAG+TGG + chr6_4:233686-233705 None:intergenic 25.0%
!!! GATTTTAAAGAGGATTTGTT+TGG - chr6_4:233944-233963 Msa0968850:three_prime_UTR 25.0%
! AGTTCAAATAACATTGAAAC+TGG + chr6_4:234002-234021 None:intergenic 25.0%
! GAAAATTTATTATGTGTCTC+AGG - chr6_4:234243-234262 Msa0968850:intron 25.0%
! AAGCATGTCATAAATTCAAA+TGG + chr6_4:234346-234365 None:intergenic 25.0%
! TAAGCTATTAAGGACTTATT+TGG - chr6_4:234513-234532 Msa0968850:intron 25.0%
!!! TTTTTTTCTTTTGCTGTTTC+TGG + chr6_4:234606-234625 None:intergenic 25.0%
!! ATTTCAGTCAATACTTTTCA+AGG + chr6_4:235340-235359 None:intergenic 25.0%
! GTATCTTAGGATAAAATACA+GGG + chr6_4:235614-235633 None:intergenic 25.0%
! AGTATCTTAGGATAAAATAC+AGG + chr6_4:235615-235634 None:intergenic 25.0%
! AGATTTCATTCAAAACTCTA+TGG + chr6_4:235750-235769 None:intergenic 25.0%
! ATGGAAATTAAGCATATTCA+CGG + chr6_4:235939-235958 None:intergenic 25.0%
! TGATCAGATCAATAATTGTA+TGG + chr6_4:235958-235977 None:intergenic 25.0%
! ATGAGATATGCTCTTAAAAA+AGG - chr6_4:236073-236092 Msa0968850:intron 25.0%
!!! TCTTTAGTTTTTGCATCTTA+TGG - chr6_4:236232-236251 Msa0968850:intron 25.0%
!!! ACACTTATGATTTTAACTTG+GGG + chr6_4:236860-236879 None:intergenic 25.0%
! AGTGTATTAAGAAAAACAGT+AGG - chr6_4:236875-236894 Msa0968850:intron 25.0%
! TATTAAGAAAAACAGTAGGT+TGG - chr6_4:236879-236898 Msa0968850:intron 25.0%
!! TTTCAGGTAAATCATCAAAT+TGG + chr6_4:237068-237087 None:intergenic 25.0%
! AACTAGAACATAGTAATTTC+AGG + chr6_4:237084-237103 None:intergenic 25.0%
!! GATATTTTATACGTCATATC+GGG - chr6_4:237320-237339 Msa0968850:intron 25.0%
!! ATATTTTATACGTCATATCG+GGG - chr6_4:237321-237340 Msa0968850:intron 25.0%
!! TATTTCATCTAGGTACTTTT+TGG - chr6_4:237408-237427 Msa0968850:intron 25.0%
! AGAATAGGAACAACTTATTA+GGG + chr6_4:237635-237654 None:intergenic 25.0%
! TAGAATAGGAACAACTTATT+AGG + chr6_4:237636-237655 None:intergenic 25.0%
!! GAACTTGTTTACATTGTATA+AGG - chr6_4:237854-237873 Msa0968850:intron 25.0%
! AAATTTATCCTTGAGTTCTT+TGG + chr6_4:237883-237902 None:intergenic 25.0%
!!! GTTTTCTGTTTTTGTGTATA+TGG - chr6_4:237942-237961 Msa0968850:intron 25.0%
! TGTGTATATGGAATTTCATT+TGG - chr6_4:237954-237973 Msa0968850:CDS 25.0%
! GCTTTATATTAGCTATTTGT+CGG - chr6_4:237976-237995 Msa0968850:CDS 25.0%
! CTTTATATTAGCTATTTGTC+GGG - chr6_4:237977-237996 Msa0968850:CDS 25.0%
!! TTAGATAATTTGCAAGATTG+AGG + chr6_4:238005-238024 None:intergenic 25.0%
! ACTAAAAATCAATGAGATGA+AGG - chr6_4:238192-238211 Msa0968850:intron 25.0%
! TATAACGATGAAGAATAGAA+TGG - chr6_4:238238-238257 Msa0968850:intron 25.0%
!!! TTTTGGTTCACTAAAAAGAT+TGG + chr6_4:238285-238304 None:intergenic 25.0%
! AAAACATATATGTAGCACTA+TGG + chr6_4:238429-238448 None:intergenic 25.0%
!!! CAATTTGTTGATATCTTGAT+GGG - chr6_4:238510-238529 Msa0968850:intron 25.0%
! AAACAGTTAATATGCAATGA+AGG + chr6_4:238593-238612 None:intergenic 25.0%
!!! TTCTTTGAGATTTAATGTGT+TGG - chr6_4:238651-238670 Msa0968850:intron 25.0%
!!! TCTTTGAGATTTAATGTGTT+GGG - chr6_4:238652-238671 Msa0968850:intron 25.0%
! GCGTATATAAGATTTAAGTA+AGG + chr6_4:238690-238709 None:intergenic 25.0%
! GTCATTGTTCTTTCATTTAT+CGG - chr6_4:239033-239052 Msa0968850:intron 25.0%
! TTGTATCAGTAAAACTACAT+TGG + chr6_4:239153-239172 None:intergenic 25.0%
! AAATCATAAAATCCAACTTC+AGG + chr6_4:239346-239365 None:intergenic 25.0%
!!! TTTCGTAGTTTATTTTCTAG+TGG + chr6_4:233686-233705 None:intergenic 25.0%
!!! GATTTTAAAGAGGATTTGTT+TGG - chr6_4:233944-233963 Msa0968850:three_prime_UTR 25.0%
! AGTTCAAATAACATTGAAAC+TGG + chr6_4:234002-234021 None:intergenic 25.0%
! GAAAATTTATTATGTGTCTC+AGG - chr6_4:234243-234262 Msa0968850:intron 25.0%
! AAGCATGTCATAAATTCAAA+TGG + chr6_4:234346-234365 None:intergenic 25.0%
! TAAGCTATTAAGGACTTATT+TGG - chr6_4:234513-234532 Msa0968850:intron 25.0%
!!! TTTTTTTCTTTTGCTGTTTC+TGG + chr6_4:234606-234625 None:intergenic 25.0%
!! ATTTCAGTCAATACTTTTCA+AGG + chr6_4:235340-235359 None:intergenic 25.0%
! GTATCTTAGGATAAAATACA+GGG + chr6_4:235614-235633 None:intergenic 25.0%
! AGTATCTTAGGATAAAATAC+AGG + chr6_4:235615-235634 None:intergenic 25.0%
! AGATTTCATTCAAAACTCTA+TGG + chr6_4:235750-235769 None:intergenic 25.0%
! ATGGAAATTAAGCATATTCA+CGG + chr6_4:235939-235958 None:intergenic 25.0%
! TGATCAGATCAATAATTGTA+TGG + chr6_4:235958-235977 None:intergenic 25.0%
! ATGAGATATGCTCTTAAAAA+AGG - chr6_4:236073-236092 Msa0968850:intron 25.0%
!!! TCTTTAGTTTTTGCATCTTA+TGG - chr6_4:236232-236251 Msa0968850:intron 25.0%
!!! ACACTTATGATTTTAACTTG+GGG + chr6_4:236860-236879 None:intergenic 25.0%
! AGTGTATTAAGAAAAACAGT+AGG - chr6_4:236875-236894 Msa0968850:intron 25.0%
! TATTAAGAAAAACAGTAGGT+TGG - chr6_4:236879-236898 Msa0968850:intron 25.0%
!! TTTCAGGTAAATCATCAAAT+TGG + chr6_4:237068-237087 None:intergenic 25.0%
! AACTAGAACATAGTAATTTC+AGG + chr6_4:237084-237103 None:intergenic 25.0%
!! GATATTTTATACGTCATATC+GGG - chr6_4:237320-237339 Msa0968850:intron 25.0%
!! ATATTTTATACGTCATATCG+GGG - chr6_4:237321-237340 Msa0968850:intron 25.0%
!! TATTTCATCTAGGTACTTTT+TGG - chr6_4:237408-237427 Msa0968850:intron 25.0%
! AGAATAGGAACAACTTATTA+GGG + chr6_4:237635-237654 None:intergenic 25.0%
! TAGAATAGGAACAACTTATT+AGG + chr6_4:237636-237655 None:intergenic 25.0%
!! GAACTTGTTTACATTGTATA+AGG - chr6_4:237854-237873 Msa0968850:intron 25.0%
! AAATTTATCCTTGAGTTCTT+TGG + chr6_4:237883-237902 None:intergenic 25.0%
!!! GTTTTCTGTTTTTGTGTATA+TGG - chr6_4:237942-237961 Msa0968850:intron 25.0%
! TGTGTATATGGAATTTCATT+TGG - chr6_4:237954-237973 Msa0968850:CDS 25.0%
! GCTTTATATTAGCTATTTGT+CGG - chr6_4:237976-237995 Msa0968850:CDS 25.0%
! CTTTATATTAGCTATTTGTC+GGG - chr6_4:237977-237996 Msa0968850:CDS 25.0%
!! TTAGATAATTTGCAAGATTG+AGG + chr6_4:238005-238024 None:intergenic 25.0%
! ACTAAAAATCAATGAGATGA+AGG - chr6_4:238192-238211 Msa0968850:intron 25.0%
! TATAACGATGAAGAATAGAA+TGG - chr6_4:238238-238257 Msa0968850:intron 25.0%
!!! TTTTGGTTCACTAAAAAGAT+TGG + chr6_4:238285-238304 None:intergenic 25.0%
! AAAACATATATGTAGCACTA+TGG + chr6_4:238429-238448 None:intergenic 25.0%
!!! CAATTTGTTGATATCTTGAT+GGG - chr6_4:238510-238529 Msa0968850:intron 25.0%
! AAACAGTTAATATGCAATGA+AGG + chr6_4:238593-238612 None:intergenic 25.0%
!!! TTCTTTGAGATTTAATGTGT+TGG - chr6_4:238651-238670 Msa0968850:intron 25.0%
!!! TCTTTGAGATTTAATGTGTT+GGG - chr6_4:238652-238671 Msa0968850:intron 25.0%
! GCGTATATAAGATTTAAGTA+AGG + chr6_4:238690-238709 None:intergenic 25.0%
! GTCATTGTTCTTTCATTTAT+CGG - chr6_4:239033-239052 Msa0968850:intron 25.0%
! TTGTATCAGTAAAACTACAT+TGG + chr6_4:239153-239172 None:intergenic 25.0%
! AAATCATAAAATCCAACTTC+AGG + chr6_4:239346-239365 None:intergenic 25.0%
AGAAGAATGATGTGATTTGA+AGG + chr6_4:233639-233658 None:intergenic 30.0%
TGGATCAGGAAAATAATGAA+AGG - chr6_4:233726-233745 Msa0968850:three_prime_UTR 30.0%
GGATCAGGAAAATAATGAAA+GGG - chr6_4:233727-233746 Msa0968850:three_prime_UTR 30.0%
! CTTTTTATGTTGTGAGGAAA+GGG - chr6_4:233753-233772 Msa0968850:three_prime_UTR 30.0%
! TTTTTATGTTGTGAGGAAAG+GGG - chr6_4:233754-233773 Msa0968850:three_prime_UTR 30.0%
!! CAAATCCTCTTTAAAATCAG+AGG + chr6_4:233942-233961 None:intergenic 30.0%
CAAACCTAAAACCACATTAA+AGG + chr6_4:234208-234227 None:intergenic 30.0%
GATGTATCTGAATTTGATGT+GGG + chr6_4:234271-234290 None:intergenic 30.0%
AGATGTATCTGAATTTGATG+TGG + chr6_4:234272-234291 None:intergenic 30.0%
ACTAATATTAGACTCAATGG+AGG + chr6_4:234468-234487 None:intergenic 30.0%
TCCATTGAGTCTAATATTAG+TGG - chr6_4:234467-234486 Msa0968850:intron 30.0%
TCCACTAATATTAGACTCAA+TGG + chr6_4:234471-234490 None:intergenic 30.0%
GTTGTTGATGTAAGCTATTA+AGG - chr6_4:234503-234522 Msa0968850:intron 30.0%
GAAACAGTGAAGTGATAATT+AGG + chr6_4:234584-234603 None:intergenic 30.0%
GCATGTTTGATTAGAGAAAA+TGG + chr6_4:234732-234751 None:intergenic 30.0%
ATGCAAAATGATGTTTACTC+AGG - chr6_4:235106-235125 Msa0968850:CDS 30.0%
TGCAAAATGATGTTTACTCA+GGG - chr6_4:235107-235126 Msa0968850:CDS 30.0%
TAAACTATTGTGTCATAGTC+AGG - chr6_4:235210-235229 Msa0968850:intron 30.0%
AAACTATTGTGTCATAGTCA+GGG - chr6_4:235211-235230 Msa0968850:intron 30.0%
GGAAAGAAACATAATGCAAT+TGG + chr6_4:235237-235256 None:intergenic 30.0%
AAATGAGACTTCAGTCAAAA+AGG + chr6_4:235258-235277 None:intergenic 30.0%
TTTATGAGATCTTCCAATAC+AGG - chr6_4:235276-235295 Msa0968850:intron 30.0%
AGAAAATTGAAAACCACCAT+GGG - chr6_4:235495-235514 Msa0968850:intron 30.0%
CTGCAATTAAAATAACAGGT+AGG + chr6_4:235667-235686 None:intergenic 30.0%
GAGTCTGCAATTAAAATAAC+AGG + chr6_4:235671-235690 None:intergenic 30.0%
ATTGCAGACTCAATAATGAT+CGG - chr6_4:235680-235699 Msa0968850:intron 30.0%
TGGAAATTAAGCATATTCAC+GGG + chr6_4:235938-235957 None:intergenic 30.0%
TGAATATCGTGCAATGATAT+TGG - chr6_4:236048-236067 Msa0968850:intron 30.0%
GAATATCGTGCAATGATATT+GGG - chr6_4:236049-236068 Msa0968850:intron 30.0%
TTCACCAATATCTGTATACA+AGG - chr6_4:236097-236116 Msa0968850:intron 30.0%
TCACCAATATCTGTATACAA+GGG - chr6_4:236098-236117 Msa0968850:intron 30.0%
ATGTTAGGTTTCATTTCCAT+TGG - chr6_4:236439-236458 Msa0968850:intron 30.0%
!!! AACGTTTGCTTCTTTTTCAA+AGG + chr6_4:236547-236566 None:intergenic 30.0%
TTTGAAAAAGAAGCAAACGT+TGG - chr6_4:236546-236565 Msa0968850:intron 30.0%
! ATTTGTTAAGAGTGGAATTG+AGG - chr6_4:236569-236588 Msa0968850:intron 30.0%
ACAAAGGAAGTTGTAAAACA+AGG + chr6_4:236700-236719 None:intergenic 30.0%
!!! TTTCCACATTTTGGTTACAA+AGG + chr6_4:236716-236735 None:intergenic 30.0%
TAGGCTATGTTAATTTCTTC+GGG + chr6_4:236749-236768 None:intergenic 30.0%
CTAGGCTATGTTAATTTCTT+CGG + chr6_4:236750-236769 None:intergenic 30.0%
TTAAAGGCTGAAAAACTGAT+GGG + chr6_4:236786-236805 None:intergenic 30.0%
TTTAAAGGCTGAAAAACTGA+TGG + chr6_4:236787-236806 None:intergenic 30.0%
ACAAACTAGAGAGAAAAAGA+AGG + chr6_4:237248-237267 None:intergenic 30.0%
AATATCTGACTATGAATCTG+TGG + chr6_4:237306-237325 None:intergenic 30.0%
! TATTTTATACGTCATATCGG+GGG - chr6_4:237322-237341 Msa0968850:intron 30.0%
AAATCAAGTTACCCTTGAAA+AGG - chr6_4:237360-237379 Msa0968850:intron 30.0%
! TACTTAGTTGACCTTTTCAA+GGG + chr6_4:237374-237393 None:intergenic 30.0%
TTGAAAAGGTCAACTAAGTA+CGG - chr6_4:237374-237393 Msa0968850:intron 30.0%
! TAAGTACTACAGGTTTTTCA+GGG + chr6_4:237495-237514 None:intergenic 30.0%
! ATAAGTACTACAGGTTTTTC+AGG + chr6_4:237496-237515 None:intergenic 30.0%
AAACCTGTAGTACTTATCTA+AGG - chr6_4:237499-237518 Msa0968850:intron 30.0%
!! ATAGTAGATTTTTGGATCAG+AGG + chr6_4:237531-237550 None:intergenic 30.0%
AGTTTACATAACTACGTTGA+AGG - chr6_4:237580-237599 Msa0968850:intron 30.0%
AAGTTGTTCCTATTCTAAGT+TGG - chr6_4:237639-237658 Msa0968850:intron 30.0%
! TTCCTATTCTAAGTTGGAAT+AGG - chr6_4:237645-237664 Msa0968850:intron 30.0%
!! TCATTCTCATTTCTAGCATA+TGG - chr6_4:237745-237764 Msa0968850:intron 30.0%
GAAAATTGAAGTGAGACAAA+CGG + chr6_4:237784-237803 None:intergenic 30.0%
CTTGTTTACATTGTATAAGG+TGG - chr6_4:237857-237876 Msa0968850:intron 30.0%
ACTTAATAGATGATACCCTT+AGG + chr6_4:238164-238183 None:intergenic 30.0%
!! GCAATTTGTTGATATCTTGA+TGG - chr6_4:238509-238528 Msa0968850:intron 30.0%
! CACAGTTAATGGTTATGTTT+TGG - chr6_4:238975-238994 Msa0968850:intron 30.0%
!! ATGGTTATGTTTTGGATTTG+TGG - chr6_4:238983-239002 Msa0968850:intron 30.0%
GACTAGAAAACATAACCAAA+TGG + chr6_4:239131-239150 None:intergenic 30.0%
!! TAGTTTTACTGATACAAGCT+AGG - chr6_4:239156-239175 Msa0968850:CDS 30.0%
TAAAGATTACCTATGAAGCA+CGG + chr6_4:239268-239287 None:intergenic 30.0%
AGAAGAATGATGTGATTTGA+AGG + chr6_4:233639-233658 None:intergenic 30.0%
TGGATCAGGAAAATAATGAA+AGG - chr6_4:233726-233745 Msa0968850:three_prime_UTR 30.0%
GGATCAGGAAAATAATGAAA+GGG - chr6_4:233727-233746 Msa0968850:three_prime_UTR 30.0%
! CTTTTTATGTTGTGAGGAAA+GGG - chr6_4:233753-233772 Msa0968850:three_prime_UTR 30.0%
! TTTTTATGTTGTGAGGAAAG+GGG - chr6_4:233754-233773 Msa0968850:three_prime_UTR 30.0%
!! CAAATCCTCTTTAAAATCAG+AGG + chr6_4:233942-233961 None:intergenic 30.0%
CAAACCTAAAACCACATTAA+AGG + chr6_4:234208-234227 None:intergenic 30.0%
GATGTATCTGAATTTGATGT+GGG + chr6_4:234271-234290 None:intergenic 30.0%
AGATGTATCTGAATTTGATG+TGG + chr6_4:234272-234291 None:intergenic 30.0%
ACTAATATTAGACTCAATGG+AGG + chr6_4:234468-234487 None:intergenic 30.0%
GTTGTTGATGTAAGCTATTA+AGG - chr6_4:234503-234522 Msa0968850:intron 30.0%
GAAACAGTGAAGTGATAATT+AGG + chr6_4:234584-234603 None:intergenic 30.0%
GCATGTTTGATTAGAGAAAA+TGG + chr6_4:234732-234751 None:intergenic 30.0%
ATGCAAAATGATGTTTACTC+AGG - chr6_4:235106-235125 Msa0968850:CDS 30.0%
TGCAAAATGATGTTTACTCA+GGG - chr6_4:235107-235126 Msa0968850:CDS 30.0%
TAAACTATTGTGTCATAGTC+AGG - chr6_4:235210-235229 Msa0968850:intron 30.0%
AAACTATTGTGTCATAGTCA+GGG - chr6_4:235211-235230 Msa0968850:intron 30.0%
GGAAAGAAACATAATGCAAT+TGG + chr6_4:235237-235256 None:intergenic 30.0%
AAATGAGACTTCAGTCAAAA+AGG + chr6_4:235258-235277 None:intergenic 30.0%
TTTATGAGATCTTCCAATAC+AGG - chr6_4:235276-235295 Msa0968850:intron 30.0%
AGAAAATTGAAAACCACCAT+GGG - chr6_4:235495-235514 Msa0968850:intron 30.0%
CTGCAATTAAAATAACAGGT+AGG + chr6_4:235667-235686 None:intergenic 30.0%
GAGTCTGCAATTAAAATAAC+AGG + chr6_4:235671-235690 None:intergenic 30.0%
ATTGCAGACTCAATAATGAT+CGG - chr6_4:235680-235699 Msa0968850:intron 30.0%
TGGAAATTAAGCATATTCAC+GGG + chr6_4:235938-235957 None:intergenic 30.0%
TGAATATCGTGCAATGATAT+TGG - chr6_4:236048-236067 Msa0968850:intron 30.0%
GAATATCGTGCAATGATATT+GGG - chr6_4:236049-236068 Msa0968850:intron 30.0%
TTCACCAATATCTGTATACA+AGG - chr6_4:236097-236116 Msa0968850:intron 30.0%
TCACCAATATCTGTATACAA+GGG - chr6_4:236098-236117 Msa0968850:intron 30.0%
ATGTTAGGTTTCATTTCCAT+TGG - chr6_4:236439-236458 Msa0968850:intron 30.0%
!!! AACGTTTGCTTCTTTTTCAA+AGG + chr6_4:236547-236566 None:intergenic 30.0%
TTTGAAAAAGAAGCAAACGT+TGG - chr6_4:236546-236565 Msa0968850:intron 30.0%
! ATTTGTTAAGAGTGGAATTG+AGG - chr6_4:236569-236588 Msa0968850:intron 30.0%
ACAAAGGAAGTTGTAAAACA+AGG + chr6_4:236700-236719 None:intergenic 30.0%
!!! TTTCCACATTTTGGTTACAA+AGG + chr6_4:236716-236735 None:intergenic 30.0%
TAGGCTATGTTAATTTCTTC+GGG + chr6_4:236749-236768 None:intergenic 30.0%
CTAGGCTATGTTAATTTCTT+CGG + chr6_4:236750-236769 None:intergenic 30.0%
TTAAAGGCTGAAAAACTGAT+GGG + chr6_4:236786-236805 None:intergenic 30.0%
TTTAAAGGCTGAAAAACTGA+TGG + chr6_4:236787-236806 None:intergenic 30.0%
ACAAACTAGAGAGAAAAAGA+AGG + chr6_4:237248-237267 None:intergenic 30.0%
AATATCTGACTATGAATCTG+TGG + chr6_4:237306-237325 None:intergenic 30.0%
! TATTTTATACGTCATATCGG+GGG - chr6_4:237322-237341 Msa0968850:intron 30.0%
AAATCAAGTTACCCTTGAAA+AGG - chr6_4:237360-237379 Msa0968850:intron 30.0%
! TACTTAGTTGACCTTTTCAA+GGG + chr6_4:237374-237393 None:intergenic 30.0%
TTGAAAAGGTCAACTAAGTA+CGG - chr6_4:237374-237393 Msa0968850:intron 30.0%
! TAAGTACTACAGGTTTTTCA+GGG + chr6_4:237495-237514 None:intergenic 30.0%
! ATAAGTACTACAGGTTTTTC+AGG + chr6_4:237496-237515 None:intergenic 30.0%
AAAACCTGTAGTACTTATCT+AGG - chr6_4:237498-237517 Msa0968850:intron 30.0%
AAACCTGTAGTACTTATCTA+GGG - chr6_4:237499-237518 Msa0968850:intron 30.0%
!! ATAGTAGATTTTTGGATCAG+AGG + chr6_4:237531-237550 None:intergenic 30.0%
AGTTTACATAACTACGTTGA+AGG - chr6_4:237580-237599 Msa0968850:intron 30.0%
AAGTTGTTCCTATTCTAAGT+TGG - chr6_4:237639-237658 Msa0968850:intron 30.0%
! TTCCTATTCTAAGTTGGAAT+AGG - chr6_4:237645-237664 Msa0968850:intron 30.0%
!! TCATTCTCATTTCTAGCATA+TGG - chr6_4:237745-237764 Msa0968850:intron 30.0%
GAAAATTGAAGTGAGACAAA+CGG + chr6_4:237784-237803 None:intergenic 30.0%
CTTGTTTACATTGTATAAGG+TGG - chr6_4:237857-237876 Msa0968850:intron 30.0%
ACTTAATAGATGATACCCTT+AGG + chr6_4:238164-238183 None:intergenic 30.0%
!! GCAATTTGTTGATATCTTGA+TGG - chr6_4:238509-238528 Msa0968850:intron 30.0%
! CACAGTTAATGGTTATGTTT+TGG - chr6_4:238975-238994 Msa0968850:intron 30.0%
!! ATGGTTATGTTTTGGATTTG+TGG - chr6_4:238983-239002 Msa0968850:intron 30.0%
GACTAGAAAACATAACCAAA+TGG + chr6_4:239131-239150 None:intergenic 30.0%
!! TAGTTTTACTGATACAAGCT+AGG - chr6_4:239156-239175 Msa0968850:CDS 30.0%
TAAAGATTACCTATGAAGCA+CGG + chr6_4:239268-239287 None:intergenic 30.0%
AATTTCTACAAGAACGGAAG+AGG + chr6_4:233513-233532 None:intergenic 35.0%
TTGGGGAATTTCTACAAGAA+CGG + chr6_4:233519-233538 None:intergenic 35.0%
TGTAATTGTTCTTCGGAGTA+TGG + chr6_4:233603-233622 None:intergenic 35.0%
TCGGAGTTGTAATTGTTCTT+CGG + chr6_4:233610-233629 None:intergenic 35.0%
!! TGTGATTTGAAGGTGTTCTT+CGG + chr6_4:233629-233648 None:intergenic 35.0%
! GCTTTTTATGTTGTGAGGAA+AGG - chr6_4:233752-233771 Msa0968850:three_prime_UTR 35.0%
TATCCCTTGTATACACTAAC+AGG + chr6_4:233848-233867 None:intergenic 35.0%
!! TAGAGCCTCTGATTTTAAAG+AGG - chr6_4:233934-233953 Msa0968850:three_prime_UTR 35.0%
AAACTGGTATTTACCTGGAA+AGG + chr6_4:233986-234005 None:intergenic 35.0%
CATTGAAACTGGTATTTACC+TGG + chr6_4:233991-234010 None:intergenic 35.0%
ATTATCAACAGTCAACAGCT+AGG - chr6_4:234043-234062 Msa0968850:three_prime_UTR 35.0%
AATCATAGTACGTCAGTCAA+TGG + chr6_4:234173-234192 None:intergenic 35.0%
!! AACCACATTAAAGGTGTCTA+GGG + chr6_4:234199-234218 None:intergenic 35.0%
!! AAACCACATTAAAGGTGTCT+AGG + chr6_4:234200-234219 None:intergenic 35.0%
! GACACCTTTAATGTGGTTTT+AGG - chr6_4:234201-234220 Msa0968850:CDS 35.0%
ACATCTAAAAAGAGAGCTCT+AGG - chr6_4:234286-234305 Msa0968850:intron 35.0%
!! AGGTGGTAACTTGTAACTTT+TGG + chr6_4:234564-234583 None:intergenic 35.0%
ACAGTGAAGTGATAATTAGG+TGG + chr6_4:234581-234600 None:intergenic 35.0%
CATTTACTCGCAAAAAAGTC+TGG + chr6_4:234857-234876 None:intergenic 35.0%
!! AACTTGACTTGCTTTCTCAA+GGG + chr6_4:234947-234966 None:intergenic 35.0%
!! TAACTTGACTTGCTTTCTCA+AGG + chr6_4:234948-234967 None:intergenic 35.0%
!! AACTTGACTTGCTTTCTCAA+GGG + chr6_4:234947-234966 None:intergenic 35.0%
!! TAACTTGACTTGCTTTCTCA+AGG + chr6_4:234948-234967 None:intergenic 35.0%
AACGATTGTCGTAGAAATAG+GGG + chr6_4:235135-235154 None:intergenic 35.0%
CAACGATTGTCGTAGAAATA+GGG + chr6_4:235136-235155 None:intergenic 35.0%
AAGTAACCAACATCCTGTAT+TGG + chr6_4:235292-235311 None:intergenic 35.0%
! AATACAGGATGTTGGTTACT+TGG - chr6_4:235291-235310 Msa0968850:intron 35.0%
! ATACAGGATGTTGGTTACTT+GGG - chr6_4:235292-235311 Msa0968850:intron 35.0%
GAATGTTACATTCCAGTGAA+GGG + chr6_4:235381-235400 None:intergenic 35.0%
AGAATGTTACATTCCAGTGA+AGG + chr6_4:235382-235401 None:intergenic 35.0%
TCAACCAAGACAATTTGTGA+TGG - chr6_4:235433-235452 Msa0968850:intron 35.0%
GAGAAAATTGAAAACCACCA+TGG - chr6_4:235494-235513 Msa0968850:intron 35.0%
GAAAATTGAAAACCACCATG+GGG - chr6_4:235496-235515 Msa0968850:intron 35.0%
! TTCCTGAACTTGTCAAGTTT+TGG - chr6_4:235539-235558 Msa0968850:intron 35.0%
! TCCTGAACTTGTCAAGTTTT+GGG - chr6_4:235540-235559 Msa0968850:intron 35.0%
TTTCTTGTGCAACTAAGTTG+TGG - chr6_4:235571-235590 Msa0968850:intron 35.0%
TGCAACTAAGTTGTGGTTAA+AGG - chr6_4:235578-235597 Msa0968850:intron 35.0%
AAGTTGTGGTTAAAGGTTGA+AGG - chr6_4:235585-235604 Msa0968850:intron 35.0%
AGTTGTGGTTAAAGGTTGAA+GGG - chr6_4:235586-235605 Msa0968850:intron 35.0%
TAAGATACTCGATGCAATCA+GGG - chr6_4:235626-235645 Msa0968850:intron 35.0%
TTGCAGACTCAATAATGATC+GGG - chr6_4:235681-235700 Msa0968850:intron 35.0%
ACTTGTATTGTTGAGTTCGA+TGG - chr6_4:235829-235848 Msa0968850:intron 35.0%
AAGATTTATAGGGTTCGTGA+AGG - chr6_4:235998-236017 Msa0968850:intron 35.0%
CACCAATATCTGTATACAAG+GGG - chr6_4:236099-236118 Msa0968850:intron 35.0%
CTAACATTTAGTGCTTCCAA+AGG + chr6_4:236426-236445 None:intergenic 35.0%
!! CTTTGGAAGCACTAAATGTT+AGG - chr6_4:236424-236443 Msa0968850:intron 35.0%
! TCATTTCCATTGGTAGCATT+TGG - chr6_4:236449-236468 Msa0968850:intron 35.0%
!! AACGTTGGATTTGTTAAGAG+TGG - chr6_4:236561-236580 Msa0968850:intron 35.0%
! GAGTTTTCATACTCACTTTG+AGG - chr6_4:236646-236665 Msa0968850:intron 35.0%
AAGTTGTAAAACAAGGTGAG+GGG + chr6_4:236693-236712 None:intergenic 35.0%
GAAGTTGTAAAACAAGGTGA+GGG + chr6_4:236694-236713 None:intergenic 35.0%
CTTCCTTTGTAACCAAAATG+TGG - chr6_4:236710-236729 Msa0968850:intron 35.0%
! AGCGAAGTTTTTCCACATTT+TGG + chr6_4:236725-236744 None:intergenic 35.0%
AGGCTATGTTAATTTCTTCG+GGG + chr6_4:236748-236767 None:intergenic 35.0%
AACATGATATACTCACTCAC+TGG - chr6_4:236825-236844 Msa0968850:intron 35.0%
TAACGGTATCAAGTATAGGA+TGG + chr6_4:237125-237144 None:intergenic 35.0%
GTGTTAACGGTATCAAGTAT+AGG + chr6_4:237129-237148 None:intergenic 35.0%
TTCAGGTAAGTGTGTGTTAA+CGG + chr6_4:237142-237161 None:intergenic 35.0%
AGATGGACAAAGAAAACTTC+AGG + chr6_4:237159-237178 None:intergenic 35.0%
ACTGTCACATGAATACACTT+TGG - chr6_4:237218-237237 Msa0968850:intron 35.0%
! GTACTTAGTTGACCTTTTCA+AGG + chr6_4:237375-237394 None:intergenic 35.0%
TGAAAAGGTCAACTAAGTAC+GGG - chr6_4:237375-237394 Msa0968850:intron 35.0%
ATGCCTTAGATAAGTACTAC+AGG + chr6_4:237505-237524 None:intergenic 35.0%
! GAACAACTTATTAGGGTGTT+TGG + chr6_4:237628-237647 None:intergenic 35.0%
GTCCTATTCCAACTTAGAAT+AGG + chr6_4:237650-237669 None:intergenic 35.0%
GAAATGAGAATGAAGTGGAT+TGG + chr6_4:237738-237757 None:intergenic 35.0%
TGCTAGAAATGAGAATGAAG+TGG + chr6_4:237743-237762 None:intergenic 35.0%
! TGAAACAGATTGATGGTTCA+TGG - chr6_4:237817-237836 Msa0968850:intron 35.0%
TTTCGTGACAGACAAATTGT+TGG - chr6_4:238127-238146 Msa0968850:intron 35.0%
!! ATGATACCCTTAGGTTGAAA+GGG + chr6_4:238155-238174 None:intergenic 35.0%
AGTTCAAATTCACCAATCAC+AGG - chr6_4:238341-238360 Msa0968850:intron 35.0%
TAAAGATTCCATCCTGTGAT+TGG + chr6_4:238356-238375 None:intergenic 35.0%
AATCACAGGATGGAATCTTT+AGG - chr6_4:238355-238374 Msa0968850:intron 35.0%
ACATATATGTAGCACTATGG+AGG + chr6_4:238426-238445 None:intergenic 35.0%
AAAGCAAAGTCAACCACAAA+GGG + chr6_4:238482-238501 None:intergenic 35.0%
! ATGAAGGAGTTGACTTTAGT+AGG + chr6_4:238577-238596 None:intergenic 35.0%
ACAAGTACATGCAAATGAAG+AGG + chr6_4:238880-238899 None:intergenic 35.0%
! GAATTAGAGAAAGCATAGCA+AGG + chr6_4:238907-238926 None:intergenic 35.0%
GCTTTCTCTAATTCTACAGA+TGG - chr6_4:238913-238932 Msa0968850:intron 35.0%
TTCATTCGTAGCACAGTTAA+TGG - chr6_4:238964-238983 Msa0968850:intron 35.0%
!! GATAGAGGACTAGTTCAAAA+CGG + chr6_4:239097-239116 None:intergenic 35.0%
TATCACTGTTCATGACCATT+TGG - chr6_4:239113-239132 Msa0968850:CDS 35.0%
TACTGATACAAGCTAGGTAT+TGG - chr6_4:239162-239181 Msa0968850:CDS 35.0%
! TCAAATTTTGTCAAAGGCTG+CGG - chr6_4:239301-239320 Msa0968850:CDS 35.0%
AAATCCAACTTCAGGCTAAT+GGG + chr6_4:239338-239357 None:intergenic 35.0%
AAAATCCAACTTCAGGCTAA+TGG + chr6_4:239339-239358 None:intergenic 35.0%
! ATTTTCATTCTTGGGGCATA+TGG - chr6_4:239362-239381 Msa0968850:CDS 35.0%
AATTTCTACAAGAACGGAAG+AGG + chr6_4:233513-233532 None:intergenic 35.0%
TTGGGGAATTTCTACAAGAA+CGG + chr6_4:233519-233538 None:intergenic 35.0%
TGTAATTGTTCTTCGGAGTA+TGG + chr6_4:233603-233622 None:intergenic 35.0%
TCGGAGTTGTAATTGTTCTT+CGG + chr6_4:233610-233629 None:intergenic 35.0%
!! TGTGATTTGAAGGTGTTCTT+CGG + chr6_4:233629-233648 None:intergenic 35.0%
! GCTTTTTATGTTGTGAGGAA+AGG - chr6_4:233752-233771 Msa0968850:three_prime_UTR 35.0%
TATCCCTTGTATACACTAAC+AGG + chr6_4:233848-233867 None:intergenic 35.0%
!! TAGAGCCTCTGATTTTAAAG+AGG - chr6_4:233934-233953 Msa0968850:three_prime_UTR 35.0%
AAACTGGTATTTACCTGGAA+AGG + chr6_4:233986-234005 None:intergenic 35.0%
CATTGAAACTGGTATTTACC+TGG + chr6_4:233991-234010 None:intergenic 35.0%
ATTATCAACAGTCAACAGCT+AGG - chr6_4:234043-234062 Msa0968850:three_prime_UTR 35.0%
AATCATAGTACGTCAGTCAA+TGG + chr6_4:234173-234192 None:intergenic 35.0%
!! AACCACATTAAAGGTGTCTA+GGG + chr6_4:234199-234218 None:intergenic 35.0%
!! AAACCACATTAAAGGTGTCT+AGG + chr6_4:234200-234219 None:intergenic 35.0%
! GACACCTTTAATGTGGTTTT+AGG - chr6_4:234201-234220 Msa0968850:CDS 35.0%
ACATCTAAAAAGAGAGCTCT+AGG - chr6_4:234286-234305 Msa0968850:intron 35.0%
!! AGGTGGTAACTTGTAACTTT+TGG + chr6_4:234564-234583 None:intergenic 35.0%
ACAGTGAAGTGATAATTAGG+TGG + chr6_4:234581-234600 None:intergenic 35.0%
CATTTACTCGCAAAAAAGTC+TGG + chr6_4:234857-234876 None:intergenic 35.0%
!! AACTTGACTTGCTTTCTCAA+GGG + chr6_4:234947-234966 None:intergenic 35.0%
!! TAACTTGACTTGCTTTCTCA+AGG + chr6_4:234948-234967 None:intergenic 35.0%
!! AACTTGACTTGCTTTCTCAA+GGG + chr6_4:234947-234966 None:intergenic 35.0%
!! TAACTTGACTTGCTTTCTCA+AGG + chr6_4:234948-234967 None:intergenic 35.0%
AACGATTGTCGTAGAAATAG+GGG + chr6_4:235135-235154 None:intergenic 35.0%
CAACGATTGTCGTAGAAATA+GGG + chr6_4:235136-235155 None:intergenic 35.0%
AAGTAACCAACATCCTGTAT+TGG + chr6_4:235292-235311 None:intergenic 35.0%
! AATACAGGATGTTGGTTACT+TGG - chr6_4:235291-235310 Msa0968850:intron 35.0%
! ATACAGGATGTTGGTTACTT+GGG - chr6_4:235292-235311 Msa0968850:intron 35.0%
GAATGTTACATTCCAGTGAA+GGG + chr6_4:235381-235400 None:intergenic 35.0%
AGAATGTTACATTCCAGTGA+AGG + chr6_4:235382-235401 None:intergenic 35.0%
TCAACCAAGACAATTTGTGA+TGG - chr6_4:235433-235452 Msa0968850:intron 35.0%
GAGAAAATTGAAAACCACCA+TGG - chr6_4:235494-235513 Msa0968850:intron 35.0%
GAAAATTGAAAACCACCATG+GGG - chr6_4:235496-235515 Msa0968850:intron 35.0%
! TTCCTGAACTTGTCAAGTTT+TGG - chr6_4:235539-235558 Msa0968850:intron 35.0%
! TCCTGAACTTGTCAAGTTTT+GGG - chr6_4:235540-235559 Msa0968850:intron 35.0%
TTTCTTGTGCAACTAAGTTG+TGG - chr6_4:235571-235590 Msa0968850:intron 35.0%
TGCAACTAAGTTGTGGTTAA+AGG - chr6_4:235578-235597 Msa0968850:intron 35.0%
AAGTTGTGGTTAAAGGTTGA+AGG - chr6_4:235585-235604 Msa0968850:intron 35.0%
AGTTGTGGTTAAAGGTTGAA+GGG - chr6_4:235586-235605 Msa0968850:intron 35.0%
TAAGATACTCGATGCAATCA+GGG - chr6_4:235626-235645 Msa0968850:intron 35.0%
TTGCAGACTCAATAATGATC+GGG - chr6_4:235681-235700 Msa0968850:intron 35.0%
ACTTGTATTGTTGAGTTCGA+TGG - chr6_4:235829-235848 Msa0968850:intron 35.0%
AAGATTTATAGGGTTCGTGA+AGG - chr6_4:235998-236017 Msa0968850:intron 35.0%
CACCAATATCTGTATACAAG+GGG - chr6_4:236099-236118 Msa0968850:intron 35.0%
CTAACATTTAGTGCTTCCAA+AGG + chr6_4:236426-236445 None:intergenic 35.0%
!! CTTTGGAAGCACTAAATGTT+AGG - chr6_4:236424-236443 Msa0968850:intron 35.0%
! TCATTTCCATTGGTAGCATT+TGG - chr6_4:236449-236468 Msa0968850:intron 35.0%
!! AACGTTGGATTTGTTAAGAG+TGG - chr6_4:236561-236580 Msa0968850:intron 35.0%
! GAGTTTTCATACTCACTTTG+AGG - chr6_4:236646-236665 Msa0968850:intron 35.0%
AAGTTGTAAAACAAGGTGAG+GGG + chr6_4:236693-236712 None:intergenic 35.0%
GAAGTTGTAAAACAAGGTGA+GGG + chr6_4:236694-236713 None:intergenic 35.0%
CTTCCTTTGTAACCAAAATG+TGG - chr6_4:236710-236729 Msa0968850:intron 35.0%
! AGCGAAGTTTTTCCACATTT+TGG + chr6_4:236725-236744 None:intergenic 35.0%
AGGCTATGTTAATTTCTTCG+GGG + chr6_4:236748-236767 None:intergenic 35.0%
AACATGATATACTCACTCAC+TGG - chr6_4:236825-236844 Msa0968850:intron 35.0%
TAACGGTATCAAGTATAGGA+TGG + chr6_4:237125-237144 None:intergenic 35.0%
GTGTTAACGGTATCAAGTAT+AGG + chr6_4:237129-237148 None:intergenic 35.0%
TTCAGGTAAGTGTGTGTTAA+CGG + chr6_4:237142-237161 None:intergenic 35.0%
AGATGGACAAAGAAAACTTC+AGG + chr6_4:237159-237178 None:intergenic 35.0%
ACTGTCACATGAATACACTT+TGG - chr6_4:237218-237237 Msa0968850:intron 35.0%
! GTACTTAGTTGACCTTTTCA+AGG + chr6_4:237375-237394 None:intergenic 35.0%
TGAAAAGGTCAACTAAGTAC+GGG - chr6_4:237375-237394 Msa0968850:intron 35.0%
! GAACAACTTATTAGGGTGTT+TGG + chr6_4:237628-237647 None:intergenic 35.0%
GTCCTATTCCAACTTAGAAT+AGG + chr6_4:237650-237669 None:intergenic 35.0%
GAAATGAGAATGAAGTGGAT+TGG + chr6_4:237738-237757 None:intergenic 35.0%
TGCTAGAAATGAGAATGAAG+TGG + chr6_4:237743-237762 None:intergenic 35.0%
! TGAAACAGATTGATGGTTCA+TGG - chr6_4:237817-237836 Msa0968850:intron 35.0%
TTTCGTGACAGACAAATTGT+TGG - chr6_4:238127-238146 Msa0968850:intron 35.0%
!! ATGATACCCTTAGGTTGAAA+GGG + chr6_4:238155-238174 None:intergenic 35.0%
AGTTCAAATTCACCAATCAC+AGG - chr6_4:238341-238360 Msa0968850:intron 35.0%
TAAAGATTCCATCCTGTGAT+TGG + chr6_4:238356-238375 None:intergenic 35.0%
AATCACAGGATGGAATCTTT+AGG - chr6_4:238355-238374 Msa0968850:intron 35.0%
ACATATATGTAGCACTATGG+AGG + chr6_4:238426-238445 None:intergenic 35.0%
AAAGCAAAGTCAACCACAAA+GGG + chr6_4:238482-238501 None:intergenic 35.0%
! ATGAAGGAGTTGACTTTAGT+AGG + chr6_4:238577-238596 None:intergenic 35.0%
ACAAGTACATGCAAATGAAG+AGG + chr6_4:238880-238899 None:intergenic 35.0%
! GAATTAGAGAAAGCATAGCA+AGG + chr6_4:238907-238926 None:intergenic 35.0%
GCTTTCTCTAATTCTACAGA+TGG - chr6_4:238913-238932 Msa0968850:intron 35.0%
TTCATTCGTAGCACAGTTAA+TGG - chr6_4:238964-238983 Msa0968850:intron 35.0%
!! GATAGAGGACTAGTTCAAAA+CGG + chr6_4:239097-239116 None:intergenic 35.0%
TATCACTGTTCATGACCATT+TGG - chr6_4:239113-239132 Msa0968850:CDS 35.0%
TACTGATACAAGCTAGGTAT+TGG - chr6_4:239162-239181 Msa0968850:CDS 35.0%
AAATCCAACTTCAGGCTAAT+GGG + chr6_4:239338-239357 None:intergenic 35.0%
AAAATCCAACTTCAGGCTAA+TGG + chr6_4:239339-239358 None:intergenic 35.0%
! ATTTTCATTCTTGGGGCATA+TGG - chr6_4:239362-239381 Msa0968850:CDS 35.0%
GAACCAATGAACCAGAAACT+GGG + chr6_4:233475-233494 None:intergenic 40.0%
AGAACCAATGAACCAGAAAC+TGG + chr6_4:233476-233495 None:intergenic 40.0%
AAATTCCCCAACAGATCGTT+AGG - chr6_4:233528-233547 Msa0968850:three_prime_UTR 40.0%
AATTCCCCAACAGATCGTTA+GGG - chr6_4:233529-233548 Msa0968850:three_prime_UTR 40.0%
TTGTTCTTCGGAGTATGGTA+GGG + chr6_4:233598-233617 None:intergenic 40.0%
ATTGTTCTTCGGAGTATGGT+AGG + chr6_4:233599-233618 None:intergenic 40.0%
AATGAAAGCTGAAACGACGA+TGG - chr6_4:233706-233725 Msa0968850:three_prime_UTR 40.0%
!! GGGATGCTTTTTATGTTGTG+AGG - chr6_4:233747-233766 Msa0968850:three_prime_UTR 40.0%
CAATACTCTCACTCATTCTC+AGG - chr6_4:233793-233812 Msa0968850:three_prime_UTR 40.0%
TCCTCCTGTTAGTGTATACA+AGG - chr6_4:233841-233860 Msa0968850:three_prime_UTR 40.0%
CCTCCTGTTAGTGTATACAA+GGG - chr6_4:233842-233861 Msa0968850:three_prime_UTR 40.0%
! AAGGTACTCTTCGATTTCGT+TGG + chr6_4:233879-233898 None:intergenic 40.0%
GTATTTACCTGGAAAGGACA+AGG + chr6_4:233980-233999 None:intergenic 40.0%
CAGTCAATGGAACAAAACTG+TGG + chr6_4:234160-234179 None:intergenic 40.0%
AGTGCTTGAACAAGATGATG+TGG - chr6_4:234309-234328 Msa0968850:intron 40.0%
CATGCTTATCAGAAAAGCAG+AGG - chr6_4:234359-234378 Msa0968850:intron 40.0%
TCTCTAATCAAACATGCCGA+AGG - chr6_4:234735-234754 Msa0968850:intron 40.0%
GTGGTATTGCCTTGTGATTA+GGG - chr6_4:234776-234795 Msa0968850:intron 40.0%
TTGTGATTAGGGTCACAGTT+GGG - chr6_4:234787-234806 Msa0968850:intron 40.0%
ATTGCTTAGCAGAAAGCAAC+TGG - chr6_4:234899-234918 Msa0968850:intron 40.0%
AAGTTAGATCGTACTGCTGT+GGG - chr6_4:234962-234981 Msa0968850:intron 40.0%
AAGTTAGATCGTACTGCTGT+GGG - chr6_4:234962-234981 Msa0968850:intron 40.0%
CCAACGATTGTCGTAGAAAT+AGG + chr6_4:235137-235156 None:intergenic 40.0%
!! CCTATTTCTACGACAATCGT+TGG - chr6_4:235134-235153 Msa0968850:CDS 40.0%
TACATAATAGCACCTGCATG+TGG + chr6_4:235170-235189 None:intergenic 40.0%
!! CAGGTGCTATTATGTAACCA+TGG - chr6_4:235174-235193 Msa0968850:CDS 40.0%
GATCTTCCAATACAGGATGT+TGG - chr6_4:235283-235302 Msa0968850:intron 40.0%
! TACAGGATGTTGGTTACTTG+GGG - chr6_4:235293-235312 Msa0968850:intron 40.0%
! TTGCTATGTTTTCAACCCCA+TGG + chr6_4:235514-235533 None:intergenic 40.0%
TAGTTGCACAAGAAATCCTG+TGG + chr6_4:235566-235585 None:intergenic 40.0%
CTGATTGCATCGAGTATCTT+AGG + chr6_4:235627-235646 None:intergenic 40.0%
CTAAGATACTCGATGCAATC+AGG - chr6_4:235625-235644 Msa0968850:intron 40.0%
AATAATGATCGGGTGTTCAC+TGG - chr6_4:235691-235710 Msa0968850:intron 40.0%
CAATACAAGTCTTCTGTGCA+AGG + chr6_4:235819-235838 None:intergenic 40.0%
AAAGGAAATCCTGGAAAAGC+TGG - chr6_4:235859-235878 Msa0968850:intron 40.0%
CTATTCTGCGATCCAAAGAT+GGG - chr6_4:235890-235909 Msa0968850:intron 40.0%
GTGTACCAAATTCCCATCTT+TGG + chr6_4:235905-235924 None:intergenic 40.0%
AAGCATATTCACGGGAACAT+CGG + chr6_4:235930-235949 None:intergenic 40.0%
GTCCCCTTGTATACAGATAT+TGG + chr6_4:236104-236123 None:intergenic 40.0%
AAAGGATGCTAGATCCCATA+AGG + chr6_4:236408-236427 None:intergenic 40.0%
TTATGGGATCTAGCATCCTT+TGG - chr6_4:236407-236426 Msa0968850:intron 40.0%
CATCTACCAAATGCTACCAA+TGG + chr6_4:236458-236477 None:intergenic 40.0%
GGAAGTTGTAAAACAAGGTG+AGG + chr6_4:236695-236714 None:intergenic 40.0%
!! CTGAAAAACTGATGGGTTGA+CGG + chr6_4:236779-236798 None:intergenic 40.0%
! TTCTCTCTAGTTTGTGCCAT+AGG - chr6_4:237253-237272 Msa0968850:intron 40.0%
! TCTCTCTAGTTTGTGCCATA+GGG - chr6_4:237254-237273 Msa0968850:intron 40.0%
TGCTGCATGAAACAGATTGA+TGG - chr6_4:237810-237829 Msa0968850:intron 40.0%
! ACAGATTGATGGTTCATGGA+AGG - chr6_4:237821-237840 Msa0968850:intron 40.0%
TCCAGATCAGTCATGTTCTA+AGG - chr6_4:237910-237929 Msa0968850:intron 40.0%
CCAGATCAGTCATGTTCTAA+GGG - chr6_4:237911-237930 Msa0968850:intron 40.0%
!! ATCAGTCATGTTCTAAGGGT+AGG - chr6_4:237915-237934 Msa0968850:intron 40.0%
TTGGAACCCTTTCAACCTAA+GGG - chr6_4:238146-238165 Msa0968850:intron 40.0%
!! GATGATACCCTTAGGTTGAA+AGG + chr6_4:238156-238175 None:intergenic 40.0%
CAAATTCACCAATCACAGGA+TGG - chr6_4:238345-238364 Msa0968850:intron 40.0%
ATCAAGTAGGCGTGTATCTA+AGG + chr6_4:238392-238411 None:intergenic 40.0%
AAGCAAAGTCAACCACAAAG+GGG + chr6_4:238481-238500 None:intergenic 40.0%
GAAAGCAAAGTCAACCACAA+AGG + chr6_4:238483-238502 None:intergenic 40.0%
! GGTTGACTTTGCTTTCTATG+TGG - chr6_4:238487-238506 Msa0968850:intron 40.0%
GGGAAGTAGAATTAGCATCT+AGG + chr6_4:238544-238563 None:intergenic 40.0%
! AAGGAGTTGACTTTAGTAGG+CGG + chr6_4:238574-238593 None:intergenic 40.0%
GGAGTTGAAGTTCTTGACAA+AGG + chr6_4:238768-238787 None:intergenic 40.0%
AATTTAGCCATCCAACTTGC+TGG - chr6_4:238806-238825 Msa0968850:intron 40.0%
GGCAGAACACCTTCAATATA+CGG - chr6_4:239004-239023 Msa0968850:intron 40.0%
GACAAGAGTCCGTATATTGA+AGG + chr6_4:239016-239035 None:intergenic 40.0%
TTCAAAACGGTTCGTTCTTG+AGG + chr6_4:239084-239103 None:intergenic 40.0%
ATGGTCATGAACAGTGATAG+AGG + chr6_4:239112-239131 None:intergenic 40.0%
TTACCTATGAAGCACGGATA+CGG + chr6_4:239262-239281 None:intergenic 40.0%
GAACCAATGAACCAGAAACT+GGG + chr6_4:233475-233494 None:intergenic 40.0%
AGAACCAATGAACCAGAAAC+TGG + chr6_4:233476-233495 None:intergenic 40.0%
AAATTCCCCAACAGATCGTT+AGG - chr6_4:233528-233547 Msa0968850:three_prime_UTR 40.0%
AATTCCCCAACAGATCGTTA+GGG - chr6_4:233529-233548 Msa0968850:three_prime_UTR 40.0%
TTGTTCTTCGGAGTATGGTA+GGG + chr6_4:233598-233617 None:intergenic 40.0%
ATTGTTCTTCGGAGTATGGT+AGG + chr6_4:233599-233618 None:intergenic 40.0%
AATGAAAGCTGAAACGACGA+TGG - chr6_4:233706-233725 Msa0968850:three_prime_UTR 40.0%
!! GGGATGCTTTTTATGTTGTG+AGG - chr6_4:233747-233766 Msa0968850:three_prime_UTR 40.0%
CAATACTCTCACTCATTCTC+AGG - chr6_4:233793-233812 Msa0968850:three_prime_UTR 40.0%
TCCTCCTGTTAGTGTATACA+AGG - chr6_4:233841-233860 Msa0968850:three_prime_UTR 40.0%
CCTCCTGTTAGTGTATACAA+GGG - chr6_4:233842-233861 Msa0968850:three_prime_UTR 40.0%
GTATTTACCTGGAAAGGACA+AGG + chr6_4:233980-233999 None:intergenic 40.0%
CAGTCAATGGAACAAAACTG+TGG + chr6_4:234160-234179 None:intergenic 40.0%
AGTGCTTGAACAAGATGATG+TGG - chr6_4:234309-234328 Msa0968850:intron 40.0%
CATGCTTATCAGAAAAGCAG+AGG - chr6_4:234359-234378 Msa0968850:intron 40.0%
TCTCTAATCAAACATGCCGA+AGG - chr6_4:234735-234754 Msa0968850:intron 40.0%
GTGGTATTGCCTTGTGATTA+GGG - chr6_4:234776-234795 Msa0968850:intron 40.0%
TTGTGATTAGGGTCACAGTT+GGG - chr6_4:234787-234806 Msa0968850:intron 40.0%
ATTGCTTAGCAGAAAGCAAC+TGG - chr6_4:234899-234918 Msa0968850:intron 40.0%
AAGTTAGATCGTACTGCTGT+GGG - chr6_4:234962-234981 Msa0968850:intron 40.0%
AAGTTAGATCGTACTGCTGT+GGG - chr6_4:234962-234981 Msa0968850:intron 40.0%
CCAACGATTGTCGTAGAAAT+AGG + chr6_4:235137-235156 None:intergenic 40.0%
!! CCTATTTCTACGACAATCGT+TGG - chr6_4:235134-235153 Msa0968850:CDS 40.0%
TACATAATAGCACCTGCATG+TGG + chr6_4:235170-235189 None:intergenic 40.0%
!! CAGGTGCTATTATGTAACCA+TGG - chr6_4:235174-235193 Msa0968850:CDS 40.0%
GATCTTCCAATACAGGATGT+TGG - chr6_4:235283-235302 Msa0968850:intron 40.0%
! TACAGGATGTTGGTTACTTG+GGG - chr6_4:235293-235312 Msa0968850:intron 40.0%
! TTGCTATGTTTTCAACCCCA+TGG + chr6_4:235514-235533 None:intergenic 40.0%
TAGTTGCACAAGAAATCCTG+TGG + chr6_4:235566-235585 None:intergenic 40.0%
CTGATTGCATCGAGTATCTT+AGG + chr6_4:235627-235646 None:intergenic 40.0%
CTAAGATACTCGATGCAATC+AGG - chr6_4:235625-235644 Msa0968850:intron 40.0%
AATAATGATCGGGTGTTCAC+TGG - chr6_4:235691-235710 Msa0968850:intron 40.0%
CAATACAAGTCTTCTGTGCA+AGG + chr6_4:235819-235838 None:intergenic 40.0%
AAAGGAAATCCTGGAAAAGC+TGG - chr6_4:235859-235878 Msa0968850:intron 40.0%
CTATTCTGCGATCCAAAGAT+GGG - chr6_4:235890-235909 Msa0968850:intron 40.0%
GTGTACCAAATTCCCATCTT+TGG + chr6_4:235905-235924 None:intergenic 40.0%
AAGCATATTCACGGGAACAT+CGG + chr6_4:235930-235949 None:intergenic 40.0%
GTCCCCTTGTATACAGATAT+TGG + chr6_4:236104-236123 None:intergenic 40.0%
AAAGGATGCTAGATCCCATA+AGG + chr6_4:236408-236427 None:intergenic 40.0%
TTATGGGATCTAGCATCCTT+TGG - chr6_4:236407-236426 Msa0968850:intron 40.0%
CATCTACCAAATGCTACCAA+TGG + chr6_4:236458-236477 None:intergenic 40.0%
GGAAGTTGTAAAACAAGGTG+AGG + chr6_4:236695-236714 None:intergenic 40.0%
!! CTGAAAAACTGATGGGTTGA+CGG + chr6_4:236779-236798 None:intergenic 40.0%
! TTCTCTCTAGTTTGTGCCAT+AGG - chr6_4:237253-237272 Msa0968850:intron 40.0%
! TCTCTCTAGTTTGTGCCATA+GGG - chr6_4:237254-237273 Msa0968850:intron 40.0%
TGCTGCATGAAACAGATTGA+TGG - chr6_4:237810-237829 Msa0968850:intron 40.0%
! ACAGATTGATGGTTCATGGA+AGG - chr6_4:237821-237840 Msa0968850:intron 40.0%
TCCAGATCAGTCATGTTCTA+AGG - chr6_4:237910-237929 Msa0968850:intron 40.0%
CCAGATCAGTCATGTTCTAA+GGG - chr6_4:237911-237930 Msa0968850:intron 40.0%
!! ATCAGTCATGTTCTAAGGGT+AGG - chr6_4:237915-237934 Msa0968850:intron 40.0%
TTGGAACCCTTTCAACCTAA+GGG - chr6_4:238146-238165 Msa0968850:intron 40.0%
!! GATGATACCCTTAGGTTGAA+AGG + chr6_4:238156-238175 None:intergenic 40.0%
CAAATTCACCAATCACAGGA+TGG - chr6_4:238345-238364 Msa0968850:intron 40.0%
ATCAAGTAGGCGTGTATCTA+AGG + chr6_4:238392-238411 None:intergenic 40.0%
AAGCAAAGTCAACCACAAAG+GGG + chr6_4:238481-238500 None:intergenic 40.0%
GAAAGCAAAGTCAACCACAA+AGG + chr6_4:238483-238502 None:intergenic 40.0%
! GGTTGACTTTGCTTTCTATG+TGG - chr6_4:238487-238506 Msa0968850:intron 40.0%
GGGAAGTAGAATTAGCATCT+AGG + chr6_4:238544-238563 None:intergenic 40.0%
! AAGGAGTTGACTTTAGTAGG+CGG + chr6_4:238574-238593 None:intergenic 40.0%
GGAGTTGAAGTTCTTGACAA+AGG + chr6_4:238768-238787 None:intergenic 40.0%
AATTTAGCCATCCAACTTGC+TGG - chr6_4:238806-238825 Msa0968850:intron 40.0%
GGCAGAACACCTTCAATATA+CGG - chr6_4:239004-239023 Msa0968850:intron 40.0%
GACAAGAGTCCGTATATTGA+AGG + chr6_4:239016-239035 None:intergenic 40.0%
TTCAAAACGGTTCGTTCTTG+AGG + chr6_4:239084-239103 None:intergenic 40.0%
ATGGTCATGAACAGTGATAG+AGG + chr6_4:239112-239131 None:intergenic 40.0%
TTACCTATGAAGCACGGATA+CGG + chr6_4:239262-239281 None:intergenic 40.0%
ACAAGAACGGAAGAGGAAAG+CGG + chr6_4:233506-233525 None:intergenic 45.0%
TGATGCCCTAACGATCTGTT+GGG + chr6_4:233537-233556 None:intergenic 45.0%
TTGATGCCCTAACGATCTGT+TGG + chr6_4:233538-233557 None:intergenic 45.0%
ACTCATTCTCAGGCTCAAGT+TGG - chr6_4:233803-233822 Msa0968850:three_prime_UTR 45.0%
CCCTTGTATACACTAACAGG+AGG + chr6_4:233845-233864 None:intergenic 45.0%
CTCTTCGATTTCGTTGGACA+TGG + chr6_4:233873-233892 None:intergenic 45.0%
TCTTTAGTCCATGCGAGAGA+AGG + chr6_4:233898-233917 None:intergenic 45.0%
ACTTGTTCCTTGTCCTTTCC+AGG - chr6_4:233970-233989 Msa0968850:three_prime_UTR 45.0%
CTCCCTAGACACCTTTAATG+TGG - chr6_4:234194-234213 Msa0968850:intron 45.0%
ACTATCGTGTCAAGGACCTT+CGG + chr6_4:234754-234773 None:intergenic 45.0%
AAGGTCCTTGACACGATAGT+TGG - chr6_4:234754-234773 Msa0968850:intron 45.0%
TACCACCAACTATCGTGTCA+AGG + chr6_4:234762-234781 None:intergenic 45.0%
GGTGGTATTGCCTTGTGATT+AGG - chr6_4:234775-234794 Msa0968850:intron 45.0%
CAACTGTGACCCTAATCACA+AGG + chr6_4:234788-234807 None:intergenic 45.0%
CTTGTGATTAGGGTCACAGT+TGG - chr6_4:234786-234805 Msa0968850:intron 45.0%
CAAGTTAGATCGTACTGCTG+TGG - chr6_4:234961-234980 Msa0968850:intron 45.0%
CAAGTTAGATCGTACTGCTG+TGG - chr6_4:234961-234980 Msa0968850:intron 45.0%
TACATTCCAGTGAAGGGAGT+TGG + chr6_4:235375-235394 None:intergenic 45.0%
CGCTCCATCACAAATTGTCT+TGG + chr6_4:235440-235459 None:intergenic 45.0%
! CTATGTTTTCAACCCCATGG+TGG + chr6_4:235511-235530 None:intergenic 45.0%
GGGGTTGAAAACATAGCAAC+TGG - chr6_4:235515-235534 Msa0968850:intron 45.0%
GCCCAAAACTTGACAAGTTC+AGG + chr6_4:235544-235563 None:intergenic 45.0%
GAGTTCGATGGTGCTTCAAA+AGG - chr6_4:235841-235860 Msa0968850:intron 45.0%
GGTGCTTCAAAAGGAAATCC+TGG - chr6_4:235850-235869 Msa0968850:intron 45.0%
GCTATTCTGCGATCCAAAGA+TGG - chr6_4:235889-235908 Msa0968850:intron 45.0%
GCGATCCAAAGATGGGAATT+TGG - chr6_4:235897-235916 Msa0968850:intron 45.0%
TTATAGGGTTCGTGAAGGTG+TGG - chr6_4:236003-236022 Msa0968850:intron 45.0%
! TATAGGGTTCGTGAAGGTGT+GGG - chr6_4:236004-236023 Msa0968850:intron 45.0%
CTCTAAACTTGTGTGCATGC+AGG - chr6_4:236123-236142 Msa0968850:intron 45.0%
AAACTTGTGTGCATGCAGGT+TGG - chr6_4:236127-236146 Msa0968850:intron 45.0%
GATGTTTGCCTCTTTGCCAA+TGG - chr6_4:236382-236401 Msa0968850:intron 45.0%
!! CTCTTTGCCAATGGCCTTAT+GGG - chr6_4:236391-236410 Msa0968850:intron 45.0%
GTGAGGGGATGAAGAAAGAT+TGG + chr6_4:236678-236697 None:intergenic 45.0%
!! AACTGATGGGTTGACGGTAA+AGG + chr6_4:236773-236792 None:intergenic 45.0%
GATAGCTGGTGCATAACAGA+TGG + chr6_4:237176-237195 None:intergenic 45.0%
GTTCCGTTATTGTGTCTCCT+AGG + chr6_4:237280-237299 None:intergenic 45.0%
TCTGTTTCATGCAGCAGCAT+TGG + chr6_4:237806-237825 None:intergenic 45.0%
TAAGGTGGCCAAAGAACTCA+AGG - chr6_4:237872-237891 Msa0968850:intron 45.0%
CCCTTAGAACATGACTGATC+TGG + chr6_4:237914-237933 None:intergenic 45.0%
GTTGGAACCCTTTCAACCTA+AGG - chr6_4:238145-238164 Msa0968850:intron 45.0%
AGTAGGCGTGTATCTAAGGA+CGG + chr6_4:238388-238407 None:intergenic 45.0%
AAAGTCAACCACAAAGGGGA+TGG + chr6_4:238477-238496 None:intergenic 45.0%
GCTAATTCTACTTCCCAAGC+AGG - chr6_4:238548-238567 Msa0968850:intron 45.0%
TGTCAAGAACTTCAACTCCG+AGG - chr6_4:238769-238788 Msa0968850:intron 45.0%
ATTTGCTTGAGCATCAGCCT+CGG + chr6_4:238789-238808 None:intergenic 45.0%
TTCTACAGATGGCCAAGTTC+AGG - chr6_4:238924-238943 Msa0968850:intron 45.0%
CTACATACTCCTCCTGAACT+TGG + chr6_4:238939-238958 None:intergenic 45.0%
! CAAGTTCAGGAGGAGTATGT+AGG - chr6_4:238937-238956 Msa0968850:intron 45.0%
! GATTCCCATTAGCCTGAAGT+TGG - chr6_4:239331-239350 Msa0968850:CDS 45.0%
ACAAGAACGGAAGAGGAAAG+CGG + chr6_4:233506-233525 None:intergenic 45.0%
TGATGCCCTAACGATCTGTT+GGG + chr6_4:233537-233556 None:intergenic 45.0%
TTGATGCCCTAACGATCTGT+TGG + chr6_4:233538-233557 None:intergenic 45.0%
ACTCATTCTCAGGCTCAAGT+TGG - chr6_4:233803-233822 Msa0968850:three_prime_UTR 45.0%
CCCTTGTATACACTAACAGG+AGG + chr6_4:233845-233864 None:intergenic 45.0%
!! ATGCGAGAGAAGGTACTCTT+CGG + chr6_4:233888-233907 None:intergenic 45.0%
TCTTTAGTCCATGCGAGAGA+AGG + chr6_4:233898-233917 None:intergenic 45.0%
ACTTGTTCCTTGTCCTTTCC+AGG - chr6_4:233970-233989 Msa0968850:three_prime_UTR 45.0%
CTCCCTAGACACCTTTAATG+TGG - chr6_4:234194-234213 Msa0968850:intron 45.0%
ACTATCGTGTCAAGGACCTT+CGG + chr6_4:234754-234773 None:intergenic 45.0%
AAGGTCCTTGACACGATAGT+TGG - chr6_4:234754-234773 Msa0968850:intron 45.0%
TACCACCAACTATCGTGTCA+AGG + chr6_4:234762-234781 None:intergenic 45.0%
GGTGGTATTGCCTTGTGATT+AGG - chr6_4:234775-234794 Msa0968850:intron 45.0%
CAACTGTGACCCTAATCACA+AGG + chr6_4:234788-234807 None:intergenic 45.0%
CTTGTGATTAGGGTCACAGT+TGG - chr6_4:234786-234805 Msa0968850:intron 45.0%
CAAGTTAGATCGTACTGCTG+TGG - chr6_4:234961-234980 Msa0968850:intron 45.0%
CAAGTTAGATCGTACTGCTG+TGG - chr6_4:234961-234980 Msa0968850:intron 45.0%
TACATTCCAGTGAAGGGAGT+TGG + chr6_4:235375-235394 None:intergenic 45.0%
CGCTCCATCACAAATTGTCT+TGG + chr6_4:235440-235459 None:intergenic 45.0%
! CTATGTTTTCAACCCCATGG+TGG + chr6_4:235511-235530 None:intergenic 45.0%
GGGGTTGAAAACATAGCAAC+TGG - chr6_4:235515-235534 Msa0968850:intron 45.0%
GCCCAAAACTTGACAAGTTC+AGG + chr6_4:235544-235563 None:intergenic 45.0%
GAGTTCGATGGTGCTTCAAA+AGG - chr6_4:235841-235860 Msa0968850:intron 45.0%
GGTGCTTCAAAAGGAAATCC+TGG - chr6_4:235850-235869 Msa0968850:intron 45.0%
GCTATTCTGCGATCCAAAGA+TGG - chr6_4:235889-235908 Msa0968850:intron 45.0%
GCGATCCAAAGATGGGAATT+TGG - chr6_4:235897-235916 Msa0968850:intron 45.0%
TTATAGGGTTCGTGAAGGTG+TGG - chr6_4:236003-236022 Msa0968850:intron 45.0%
! TATAGGGTTCGTGAAGGTGT+GGG - chr6_4:236004-236023 Msa0968850:intron 45.0%
CTCTAAACTTGTGTGCATGC+AGG - chr6_4:236123-236142 Msa0968850:intron 45.0%
AAACTTGTGTGCATGCAGGT+TGG - chr6_4:236127-236146 Msa0968850:intron 45.0%
GATGTTTGCCTCTTTGCCAA+TGG - chr6_4:236382-236401 Msa0968850:intron 45.0%
!! CTCTTTGCCAATGGCCTTAT+GGG - chr6_4:236391-236410 Msa0968850:intron 45.0%
GTGAGGGGATGAAGAAAGAT+TGG + chr6_4:236678-236697 None:intergenic 45.0%
!! AACTGATGGGTTGACGGTAA+AGG + chr6_4:236773-236792 None:intergenic 45.0%
GATAGCTGGTGCATAACAGA+TGG + chr6_4:237176-237195 None:intergenic 45.0%
GTTCCGTTATTGTGTCTCCT+AGG + chr6_4:237280-237299 None:intergenic 45.0%
TCTGTTTCATGCAGCAGCAT+TGG + chr6_4:237806-237825 None:intergenic 45.0%
TAAGGTGGCCAAAGAACTCA+AGG - chr6_4:237872-237891 Msa0968850:intron 45.0%
CCCTTAGAACATGACTGATC+TGG + chr6_4:237914-237933 None:intergenic 45.0%
GTTGGAACCCTTTCAACCTA+AGG - chr6_4:238145-238164 Msa0968850:intron 45.0%
AGTAGGCGTGTATCTAAGGA+CGG + chr6_4:238388-238407 None:intergenic 45.0%
AAAGTCAACCACAAAGGGGA+TGG + chr6_4:238477-238496 None:intergenic 45.0%
GCTAATTCTACTTCCCAAGC+AGG - chr6_4:238548-238567 Msa0968850:intron 45.0%
TGTCAAGAACTTCAACTCCG+AGG - chr6_4:238769-238788 Msa0968850:intron 45.0%
ATTTGCTTGAGCATCAGCCT+CGG + chr6_4:238789-238808 None:intergenic 45.0%
TTCTACAGATGGCCAAGTTC+AGG - chr6_4:238924-238943 Msa0968850:intron 45.0%
CTACATACTCCTCCTGAACT+TGG + chr6_4:238939-238958 None:intergenic 45.0%
! CAAGTTCAGGAGGAGTATGT+AGG - chr6_4:238937-238956 Msa0968850:intron 45.0%
! GATTCCCATTAGCCTGAAGT+TGG - chr6_4:239331-239350 Msa0968850:CDS 45.0%
!! GAGCCCAGTTTCTGGTTCAT+TGG - chr6_4:233469-233488 Msa0968850:three_prime_UTR 50.0%
GATGCCCTAACGATCTGTTG+GGG + chr6_4:233536-233555 None:intergenic 50.0%
TTCTTCGGAGTATGGTAGGG+AGG + chr6_4:233595-233614 None:intergenic 50.0%
AGCTGAAACGACGATGGATC+AGG - chr6_4:233712-233731 Msa0968850:three_prime_UTR 50.0%
GTGAGGAAAGGGGATGTTGT+TGG - chr6_4:233764-233783 Msa0968850:three_prime_UTR 50.0%
!! GAAGAGTACCTTCTCTCGCA+TGG - chr6_4:233887-233906 Msa0968850:three_prime_UTR 50.0%
GTCCTTGACACGATAGTTGG+TGG - chr6_4:234757-234776 Msa0968850:intron 50.0%
AAGTGTCCAACTCCCTTCAC+TGG - chr6_4:235366-235385 Msa0968850:intron 50.0%
!!! CTTGTCAAGTTTTGGGCCAC+AGG - chr6_4:235547-235566 Msa0968850:intron 50.0%
AATGATCGGGTGTTCACTGG+AGG - chr6_4:235694-235713 Msa0968850:intron 50.0%
AATCCTGGAAAAGCTGGTGC+TGG - chr6_4:235865-235884 Msa0968850:intron 50.0%
ATCCTGGAAAAGCTGGTGCT+GGG - chr6_4:235866-235885 Msa0968850:intron 50.0%
CCATAAGGCCATTGGCAAAG+AGG + chr6_4:236393-236412 None:intergenic 50.0%
! CCTCTTTGCCAATGGCCTTA+TGG - chr6_4:236390-236409 Msa0968850:intron 50.0%
GCTAGATCCCATAAGGCCAT+TGG + chr6_4:236401-236420 None:intergenic 50.0%
! ATGGGTTGACGGTAAAGGCT+AGG + chr6_4:236768-236787 None:intergenic 50.0%
ACCAGCTATCTGCATGTGAG+TGG - chr6_4:237186-237205 Msa0968850:CDS 50.0%
TCTGCATGTGAGTGGCTTAG+TGG - chr6_4:237194-237213 Msa0968850:CDS 50.0%
! TAGTTTGTGCCATAGGGCCT+AGG - chr6_4:237260-237279 Msa0968850:intron 50.0%
ATTGTGTCTCCTAGGCCCTA+TGG + chr6_4:237272-237291 None:intergenic 50.0%
GGGCCTAGGAGACACAATAA+CGG - chr6_4:237274-237293 Msa0968850:intron 50.0%
! GGCAATGCAGAGCATCAAGT+AGG + chr6_4:238405-238424 None:intergenic 50.0%
TGAAAGCCTCACCAGCAAGT+TGG + chr6_4:238820-238839 None:intergenic 50.0%
TACAGATGGCCAAGTTCAGG+AGG - chr6_4:238927-238946 Msa0968850:intron 50.0%
TGTCCGTATCCGTGCTTCAT+AGG - chr6_4:239256-239275 Msa0968850:CDS 50.0%
!! GAGCCCAGTTTCTGGTTCAT+TGG - chr6_4:233469-233488 Msa0968850:three_prime_UTR 50.0%
GATGCCCTAACGATCTGTTG+GGG + chr6_4:233536-233555 None:intergenic 50.0%
TTCTTCGGAGTATGGTAGGG+AGG + chr6_4:233595-233614 None:intergenic 50.0%
AGCTGAAACGACGATGGATC+AGG - chr6_4:233712-233731 Msa0968850:three_prime_UTR 50.0%
GTGAGGAAAGGGGATGTTGT+TGG - chr6_4:233764-233783 Msa0968850:three_prime_UTR 50.0%
!! GAAGAGTACCTTCTCTCGCA+TGG - chr6_4:233887-233906 Msa0968850:three_prime_UTR 50.0%
GTCCTTGACACGATAGTTGG+TGG - chr6_4:234757-234776 Msa0968850:intron 50.0%
AAGTGTCCAACTCCCTTCAC+TGG - chr6_4:235366-235385 Msa0968850:intron 50.0%
!!! CTTGTCAAGTTTTGGGCCAC+AGG - chr6_4:235547-235566 Msa0968850:intron 50.0%
AATGATCGGGTGTTCACTGG+AGG - chr6_4:235694-235713 Msa0968850:intron 50.0%
AATCCTGGAAAAGCTGGTGC+TGG - chr6_4:235865-235884 Msa0968850:intron 50.0%
ATCCTGGAAAAGCTGGTGCT+GGG - chr6_4:235866-235885 Msa0968850:intron 50.0%
CCATAAGGCCATTGGCAAAG+AGG + chr6_4:236393-236412 None:intergenic 50.0%
! CCTCTTTGCCAATGGCCTTA+TGG - chr6_4:236390-236409 Msa0968850:intron 50.0%
GCTAGATCCCATAAGGCCAT+TGG + chr6_4:236401-236420 None:intergenic 50.0%
! ATGGGTTGACGGTAAAGGCT+AGG + chr6_4:236768-236787 None:intergenic 50.0%
ACCAGCTATCTGCATGTGAG+TGG - chr6_4:237186-237205 Msa0968850:CDS 50.0%
TCTGCATGTGAGTGGCTTAG+TGG - chr6_4:237194-237213 Msa0968850:CDS 50.0%
! TAGTTTGTGCCATAGGGCCT+AGG - chr6_4:237260-237279 Msa0968850:intron 50.0%
ATTGTGTCTCCTAGGCCCTA+TGG + chr6_4:237272-237291 None:intergenic 50.0%
GGGCCTAGGAGACACAATAA+CGG - chr6_4:237274-237293 Msa0968850:intron 50.0%
! GGCAATGCAGAGCATCAAGT+AGG + chr6_4:238405-238424 None:intergenic 50.0%
TGAAAGCCTCACCAGCAAGT+TGG + chr6_4:238820-238839 None:intergenic 50.0%
TACAGATGGCCAAGTTCAGG+AGG - chr6_4:238927-238946 Msa0968850:intron 50.0%
TGTCCGTATCCGTGCTTCAT+AGG - chr6_4:239256-239275 Msa0968850:CDS 50.0%
ATGGGAATCTTTCACTCCGC+AGG + chr6_4:239320-239339 None:intergenic 50.0%
AGAACGGAAGAGGAAAGCGG+CGG + chr6_4:233503-233522 None:intergenic 55.0%
TCGGAGTATGGTAGGGAGGT+GGG + chr6_4:233591-233610 None:intergenic 55.0%
TTCGGAGTATGGTAGGGAGG+TGG + chr6_4:233592-233611 None:intergenic 55.0%
GGTGCATTGTCTCCACATGC+AGG - chr6_4:235155-235174 Msa0968850:CDS 55.0%
! TCCTGGAAAAGCTGGTGCTG+GGG - chr6_4:235867-235886 Msa0968850:intron 55.0%
GCCACTCACATGCAGATAGC+TGG + chr6_4:237190-237209 None:intergenic 55.0%
CTTTAGTAGGCGGCCTGCTT+GGG + chr6_4:238564-238583 None:intergenic 55.0%
ACTTTAGTAGGCGGCCTGCT+TGG + chr6_4:238565-238584 None:intergenic 55.0%
!! AGCCATCCAACTTGCTGGTG+AGG - chr6_4:238811-238830 Msa0968850:intron 55.0%
! AGCCTCACCAGCAAGTTGGA+TGG + chr6_4:238816-238835 None:intergenic 55.0%
TCAACAGCAGCCAGCTGTGT+CGG - chr6_4:239188-239207 Msa0968850:CDS 55.0%
ACACGACACGGACACTGACA+CGG + chr6_4:239226-239245 None:intergenic 55.0%
GTCAGTGTCCGTGTCGTGTT+CGG - chr6_4:239227-239246 Msa0968850:CDS 55.0%
AGAACGGAAGAGGAAAGCGG+CGG + chr6_4:233503-233522 None:intergenic 55.0%
TCGGAGTATGGTAGGGAGGT+GGG + chr6_4:233591-233610 None:intergenic 55.0%
TTCGGAGTATGGTAGGGAGG+TGG + chr6_4:233592-233611 None:intergenic 55.0%
GGTGCATTGTCTCCACATGC+AGG - chr6_4:235155-235174 Msa0968850:CDS 55.0%
! TCCTGGAAAAGCTGGTGCTG+GGG - chr6_4:235867-235886 Msa0968850:intron 55.0%
GCCACTCACATGCAGATAGC+TGG + chr6_4:237190-237209 None:intergenic 55.0%
ACAGCACACCATCCCCTTTG+TGG - chr6_4:238466-238485 Msa0968850:intron 55.0%
CTTTAGTAGGCGGCCTGCTT+GGG + chr6_4:238564-238583 None:intergenic 55.0%
ACTTTAGTAGGCGGCCTGCT+TGG + chr6_4:238565-238584 None:intergenic 55.0%
!! AGCCATCCAACTTGCTGGTG+AGG - chr6_4:238811-238830 Msa0968850:intron 55.0%
! AGCCTCACCAGCAAGTTGGA+TGG + chr6_4:238816-238835 None:intergenic 55.0%
TCAACAGCAGCCAGCTGTGT+CGG - chr6_4:239188-239207 Msa0968850:CDS 55.0%
ACACGACACGGACACTGACA+CGG + chr6_4:239226-239245 None:intergenic 55.0%
GTCAGTGTCCGTGTCGTGTT+CGG - chr6_4:239227-239246 Msa0968850:CDS 55.0%
!! GTCCGTGTCGTGTTCGGTGT+CGG - chr6_4:239233-239252 Msa0968850:CDS 60.0%
CACCGACACCGAACACGACA+CGG + chr6_4:239238-239257 None:intergenic 60.0%
!! GTCCGTGTCGTGTTCGGTGT+CGG - chr6_4:239233-239252 Msa0968850:CDS 60.0%
CACCGACACCGAACACGACA+CGG + chr6_4:239238-239257 None:intergenic 60.0%
ACGGAAGAGGAAAGCGGCGG+CGG + chr6_4:233500-233519 None:intergenic 65.0%
! GCCCCAGCACCAGCTTTTCC+AGG + chr6_4:235871-235890 None:intergenic 65.0%
GACACGGACACTGACACGGC+TGG + chr6_4:239222-239241 None:intergenic 65.0%
ACGGAAGAGGAAAGCGGCGG+CGG + chr6_4:233500-233519 None:intergenic 65.0%
! GCCCCAGCACCAGCTTTTCC+AGG + chr6_4:235871-235890 None:intergenic 65.0%
GACACGGACACTGACACGGC+TGG + chr6_4:239222-239241 None:intergenic 65.0%
CGGAAGAGGAAAGCGGCGGC+GGG + chr6_4:233499-233518 None:intergenic 70.0%
GGCTGCAACGCCGACACAGC+TGG + chr6_4:239201-239220 None:intergenic 70.0%
CGGAAGAGGAAAGCGGCGGC+GGG + chr6_4:233499-233518 None:intergenic 70.0%
GGCTGCAACGCCGACACAGC+TGG + chr6_4:239201-239220 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 233467 239561 233467 ID=Msa0968850;Name=Msa0968850
chr6_4 mRNA 233467 239561 233467 ID=Msa0968850-mRNA-1;Parent=Msa0968850;Name=Msa0968850-mRNA-1;_AED=0.14;_eAED=0.14;_QI=99|0.85|0.87|1|1|1|8|598|367
chr6_4 exon 233467 234096 233467 ID=Msa0968850-mRNA-1:exon:169;Parent=Msa0968850-mRNA-1
chr6_4 exon 234201 234252 234201 ID=Msa0968850-mRNA-1:exon:168;Parent=Msa0968850-mRNA-1
chr6_4 exon 235096 235203 235096 ID=Msa0968850-mRNA-1:exon:167;Parent=Msa0968850-mRNA-1
chr6_4 exon 236884 237027 236884 ID=Msa0968850-mRNA-1:exon:166;Parent=Msa0968850-mRNA-1
chr6_4 exon 237110 237220 237110 ID=Msa0968850-mRNA-1:exon:165;Parent=Msa0968850-mRNA-1
chr6_4 exon 237953 238117 237953 ID=Msa0968850-mRNA-1:exon:164;Parent=Msa0968850-mRNA-1
chr6_4 exon 238698 238763 238698 ID=Msa0968850-mRNA-1:exon:163;Parent=Msa0968850-mRNA-1
chr6_4 exon 239037 239561 239037 ID=Msa0968850-mRNA-1:exon:162;Parent=Msa0968850-mRNA-1
chr6_4 five_prime_UTR 239463 239561 239463 ID=Msa0968850-mRNA-1:five_prime_utr;Parent=Msa0968850-mRNA-1
chr6_4 CDS 239037 239462 239037 ID=Msa0968850-mRNA-1:cds;Parent=Msa0968850-mRNA-1
chr6_4 CDS 238698 238763 238698 ID=Msa0968850-mRNA-1:cds;Parent=Msa0968850-mRNA-1
chr6_4 CDS 237953 238117 237953 ID=Msa0968850-mRNA-1:cds;Parent=Msa0968850-mRNA-1
chr6_4 CDS 237110 237220 237110 ID=Msa0968850-mRNA-1:cds;Parent=Msa0968850-mRNA-1
chr6_4 CDS 236884 237027 236884 ID=Msa0968850-mRNA-1:cds;Parent=Msa0968850-mRNA-1
chr6_4 CDS 235096 235203 235096 ID=Msa0968850-mRNA-1:cds;Parent=Msa0968850-mRNA-1
chr6_4 CDS 234201 234252 234201 ID=Msa0968850-mRNA-1:cds;Parent=Msa0968850-mRNA-1
chr6_4 CDS 234065 234096 234065 ID=Msa0968850-mRNA-1:cds;Parent=Msa0968850-mRNA-1
chr6_4 three_prime_UTR 233467 234064 233467 ID=Msa0968850-mRNA-1:three_prime_utr;Parent=Msa0968850-mRNA-1
Gene Sequence

>Msa0968850

ATGAACGCTGCTGCTTTCTTCACCCACCTCCCTACCATACTCCGAAGAACAATTACAACTCCGAAGAACACCTTCAAATCACATCATTCTTCTTTTAGTTCTCAATTCTTGTTTACTCCACTAGAAAATAAACTACGAAAAATGAAAGCTGAAACGACGATGGATCAGGAAAATAATGAAAGGGATGCTTTTTATGTTGTGAGGAAAGGGGATGTTGTTGGAATTTACAATACTCTCACTCATTCTCAGGCTCAAGTTGGATCTTCAGTATGTGATCCTCCTGTTAGTGTATACAAGGGATATTCCATGTCCAACGAAATCGAAGAGTACCTTCTCTCGCATGGACTAAAGAATGCTTTATACACAATTAGAGCCTCTGATTTTAAAGAGGATTTGTTTGGCACACTTGTTCCTTGTCCTTTCCAGGATCCCACATCAAATTCAGATACATCTAAAAAGAGAGCTCTAGGAGTGCTTGAACAAGATGATGTGAAAGCAACTGGTTTGACATCTATCTCTGAAGATCCCTTGAGAAAGCAAGTCAAGTTAGATCGTACTGCTGTGGGCGAAGCATCTTCACTTGCAAATAGAGATCCCTTGAGAAAGCAAGTCAAGTTAGATCGTACTGCTGTGGGCGAAGCATCTTCACTTGCAAATTCATATATCCTTGCACAGAAGACTTGTATTGTTGAGTTCGATGGTGCTTCAAAAGGAAATCCTGGAAAAGCTGGTGCTGGGGCTATTCTGCGATCCAAAGATGGGAATTTGATTTATAGGGTTCGTGAAGGTGTGGGTATAGCAACAAACAATGTTGCTGAATATCGTGCAATGATATTGGGAATGAGATATGCTCTTAAAAAAGGATTCACCAATATCTGTATACAAGGGGACTCTAAACTTGTGTGCATGCAGATTGATGGTTCATGGAAGGTCAAGAACGAGAACTTGTTTACATTGTATAAGGTGGCCAAAGAACTCAAGGATAAATTTGCGTCATTCCAGATCAGTCATGTTCTAAGGAACTTCAACTCCGAGGCTGATGCTCAAGCAAATTTAGCCATCCAACTTGCTGATGGCCAAGTTCAGGAGGAGTATGTAGGTTAA
Protein sequence

>Msa0968850

MNAAAFFTHLPTILRRTITTPKNTFKSHHSSFSSQFLFTPLENKLRKMKAETTMDQENNERDAFYVVRKGDVVGIYNTLTHSQAQVGSSVCDPPVSVYKGYSMSNEIEEYLLSHGLKNALYTIRASDFKEDLFGTLVPCPFQDPTSNSDTSKKRALGVLEQDDVKATGLTSISEDPLRKQVKLDRTAVGEASSLANRDPLRKQVKLDRTAVGEASSLANSYILAQKTCIVEFDGASKGNPGKAGAGAILRSKDGNLIYRVREGVGIATNNVAEYRAMILGMRYALKKGFTNICIQGDSKLVCMQIDGSWKVKNENLFTLYKVAKELKDKFASFQISHVLRNFNSEADAQANLAIQLADGQVQEEYVG*