AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0915520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0915520 MtrunA17_Chr6g0470541 97.066 852 24 1 4 854 49 900 0.0 1692
Msa0915520 MtrunA17_Chr7g0238581 39.812 319 182 6 6 315 79 396 1.14e-60 217
Msa0915520 MtrunA17_Chr7g0238581 40.496 121 65 3 739 854 511 629 5.99e-18 88.6
Msa0915520 MtrunA17_Chr1g0182151 28.716 296 180 9 6 272 101 394 5.16e-29 125
Msa0915520 MtrunA17_Chr2g0307481 30.000 260 172 6 6 257 119 376 5.63e-28 120
Msa0915520 MtrunA17_Chr3g0132921 30.634 284 162 9 6 257 48 328 2.52e-27 117
Msa0915520 MtrunA17_Chr4g0035661 31.769 277 176 10 6 272 130 403 2.04e-26 116
Msa0915520 MtrunA17_Chr5g0407791 28.986 276 175 5 2 256 914 1189 8.22e-26 114
Msa0915520 MtrunA17_Chr3g0145071 31.408 277 177 10 6 272 140 413 1.16e-25 114
Msa0915520 MtrunA17_Chr2g0331761 31.095 283 165 12 6 271 235 504 6.24e-25 111
Msa0915520 MtrunA17_Chr8g0369881 30.662 287 148 9 6 256 904 1175 9.67e-25 111
Msa0915520 MtrunA17_Chr7g0245931 29.496 278 169 5 6 257 98 374 2.32e-24 109
Msa0915520 MtrunA17_Chr2g0327581 26.647 334 212 12 6 309 96 426 2.64e-24 109
Msa0915520 MtrunA17_Chr5g0427481 30.132 302 173 12 6 272 56 354 6.38e-24 108
Msa0915520 MtrunA17_Chr6g0485471 27.758 281 177 9 6 271 165 434 9.18e-24 107
Msa0915520 MtrunA17_Chr3g0134191 27.356 329 179 13 6 281 47 368 1.13e-23 107
Msa0915520 MtrunA17_Chr4g0062291 28.736 261 175 5 6 257 176 434 1.35e-23 107
Msa0915520 MtrunA17_Chr4g0045381 29.966 297 176 11 5 272 234 527 1.40e-23 108
Msa0915520 MtrunA17_Chr7g0266631 27.425 299 184 10 6 272 56 353 4.86e-23 105
Msa0915520 MtrunA17_Chr2g0295881 27.740 292 175 9 6 271 248 529 7.99e-23 104
Msa0915520 MtrunA17_Chr1g0178411 27.425 299 184 11 6 272 60 357 9.75e-23 104
Msa0915520 MtrunA17_Chr5g0411971 28.060 335 219 13 6 325 444 771 1.22e-22 104
Msa0915520 MtrunA17_Chr1g0191181 28.788 330 198 13 6 309 128 446 1.65e-22 103
Msa0915520 MtrunA17_Chr1g0153061 28.338 367 197 18 6 313 47 406 2.50e-22 103
Msa0915520 MtrunA17_Chr1g0191851 29.927 274 178 8 6 268 192 462 5.68e-22 102
Msa0915520 MtrunA17_Chr5g0398521 28.723 282 167 8 6 257 103 380 9.06e-22 101
Msa0915520 MtrunA17_Chr2g0322291 28.000 300 180 12 4 272 128 422 1.09e-21 101
Msa0915520 MtrunA17_Chr1g0193221 30.566 265 166 8 4 251 37 300 1.73e-21 100
Msa0915520 MtrunA17_Chr5g0421591 28.107 338 215 14 6 325 419 746 2.14e-21 100
Msa0915520 MtrunA17_Chr7g0258991 29.885 261 170 8 6 256 114 371 2.38e-21 100
Msa0915520 MtrunA17_Chr5g0421521 28.402 338 214 14 6 325 419 746 2.51e-21 100
Msa0915520 MtrunA17_Chr4g0053211 26.974 304 167 10 6 257 51 351 4.01e-21 99.4
Msa0915520 MtrunA17_Chr4g0067421 27.682 289 177 11 6 271 256 535 9.86e-21 97.8
Msa0915520 MtrunA17_Chr3g0142261 27.758 281 178 10 6 269 67 339 2.88e-20 97.1
Msa0915520 MtrunA17_Chr1g0192481 30.242 248 155 8 25 256 120 365 4.54e-20 95.1
Msa0915520 MtrunA17_Chr1g0152231 28.720 289 184 8 4 272 44 330 8.74e-20 95.1
Msa0915520 MtrunA17_Chr7g0271961 29.752 242 155 8 25 256 466 702 1.15e-19 94.7
Msa0915520 MtrunA17_Chr2g0312631 29.183 257 168 6 28 271 450 705 2.10e-19 94.0
Msa0915520 MtrunA17_Chr8g0367581 28.723 282 181 10 6 276 189 461 1.01e-18 92.0
Msa0915520 MtrunA17_Chr8g0372171 26.100 341 215 13 1 325 63 382 1.96e-18 90.9
Msa0915520 MtrunA17_Chr7g0272871 27.273 275 186 7 5 268 171 442 2.37e-18 90.1
Msa0915520 MtrunA17_Chr5g0405181 25.000 340 217 10 1 324 64 381 2.65e-18 90.5
Msa0915520 MtrunA17_Chr7g0257301 28.028 289 165 10 24 271 453 739 3.77e-18 90.1
Msa0915520 MtrunA17_Chr8g0377731 29.603 277 159 10 28 271 113 386 8.10e-18 89.0
Msa0915520 MtrunA17_Chr4g0070001 26.923 260 178 8 6 258 188 442 1.11e-17 88.6
Msa0915520 MtrunA17_Chr4g0069141 26.263 297 189 10 4 272 193 487 1.73e-17 88.2
Msa0915520 MtrunA17_Chr1g0195111 31.641 256 140 12 25 256 458 702 2.03e-17 87.4
Msa0915520 MtrunA17_Chr4g0049011 26.545 275 177 6 6 256 324 597 2.10e-17 87.0
Msa0915520 MtrunA17_Chr3g0122121 29.008 262 151 11 28 257 158 416 2.52e-17 87.4
Msa0915520 MtrunA17_Chr5g0447041 27.217 327 170 13 6 271 480 799 3.35e-17 87.0
Msa0915520 MtrunA17_Chr2g0280421 28.464 267 171 10 6 256 483 745 4.04e-17 86.3
Msa0915520 MtrunA17_Chr3g0102921 26.580 459 287 18 6 429 484 927 4.15e-17 86.7
Msa0915520 MtrunA17_Chr6g0483701 27.402 281 179 11 6 269 77 349 4.24e-17 86.7
Msa0915520 MtrunA17_Chr4g0042061 26.978 278 174 7 25 274 497 773 1.08e-16 85.1
Msa0915520 MtrunA17_Chr2g0319271 25.725 276 178 6 6 256 446 719 1.68e-16 84.3
Msa0915520 MtrunA17_Chr4g0036001 25.283 265 180 8 4 257 69 326 7.02e-16 82.4
Msa0915520 MtrunA17_Chr5g0445211 26.316 285 173 12 5 256 108 388 1.38e-13 75.1
Msa0915520 MtrunA17_Chr8g0386891 36.585 123 75 2 152 271 30 152 2.04e-12 70.1
Msa0915520 MtrunA17_Chr7g0269681 40.367 109 58 4 152 256 67 172 2.46e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0915520 AT5G23910.2 52.788 269 119 5 6 273 59 320 5.64e-81 275
Msa0915520 AT5G23910.2 57.843 102 40 2 752 853 607 705 3.90e-29 124
Msa0915520 AT5G23910.1 52.788 269 119 5 6 273 55 316 6.36e-81 275
Msa0915520 AT5G23910.1 57.843 102 40 2 752 853 603 701 3.91e-29 124
Msa0915520 AT5G02370.1 47.037 270 134 5 6 272 74 337 6.40e-65 228
Msa0915520 AT1G18550.1 30.566 265 174 6 1 257 199 461 2.05e-27 119
Msa0915520 AT2G37420.1 29.964 277 168 8 6 257 95 370 5.35e-25 112
Msa0915520 AT2G37420.2 29.964 277 168 8 6 257 95 370 5.35e-25 112
Msa0915520 AT5G65930.3 28.938 273 173 5 6 257 923 1195 8.38e-25 112
Msa0915520 AT5G65930.2 28.938 273 173 5 6 257 917 1189 8.50e-25 112
Msa0915520 AT5G65930.1 28.938 273 173 5 6 257 916 1188 8.95e-25 112
Msa0915520 AT1G12430.1 28.777 278 171 4 6 257 116 392 1.89e-24 110
Msa0915520 AT1G12430.2 28.777 278 171 4 6 257 116 392 1.91e-24 110
Msa0915520 AT3G45850.2 26.126 333 215 12 6 309 102 432 2.12e-24 110
Msa0915520 AT3G45850.1 26.126 333 215 12 6 309 102 432 2.12e-24 110
Msa0915520 AT5G60930.3 29.430 316 171 12 6 272 45 357 2.18e-24 110
Msa0915520 AT5G60930.2 29.430 316 171 12 6 272 45 357 2.33e-24 110
Msa0915520 AT5G60930.1 29.430 316 171 12 6 272 45 357 2.50e-24 110
Msa0915520 AT2G28620.3 27.358 318 200 11 21 309 112 427 8.40e-24 108
Msa0915520 AT2G28620.2 27.358 318 200 11 21 309 112 427 8.40e-24 108
Msa0915520 AT2G28620.1 27.358 318 200 11 21 309 112 427 8.47e-24 108
Msa0915520 AT2G21380.2 29.964 277 181 10 6 272 145 418 1.01e-23 108
Msa0915520 AT2G21380.1 29.964 277 181 10 6 272 145 418 1.01e-23 108
Msa0915520 AT5G47820.2 28.955 335 170 15 6 281 50 375 1.81e-23 107
Msa0915520 AT5G47820.1 28.955 335 170 15 6 281 50 375 1.81e-23 107
Msa0915520 AT4G39050.1 30.325 277 180 10 6 272 139 412 1.97e-23 107
Msa0915520 AT2G22610.2 31.179 263 165 9 6 257 462 719 1.98e-23 107
Msa0915520 AT2G22610.1 31.179 263 165 9 6 257 462 719 2.19e-23 107
Msa0915520 AT2G22610.3 31.179 263 165 9 6 257 463 720 2.30e-23 107
Msa0915520 AT3G16060.1 30.035 283 168 12 6 271 219 488 7.16e-23 105
Msa0915520 AT2G36200.1 27.425 299 184 9 6 272 59 356 8.62e-23 105
Msa0915520 AT2G36200.2 26.756 299 186 8 6 272 59 356 1.80e-22 104
Msa0915520 AT5G27950.1 27.341 267 176 5 6 256 119 383 2.64e-22 102
Msa0915520 AT1G01950.2 29.893 281 164 9 6 257 106 382 3.04e-22 103
Msa0915520 AT1G01950.1 29.893 281 164 9 6 257 106 382 3.13e-22 103
Msa0915520 AT1G01950.3 29.893 281 164 9 6 257 106 382 4.79e-22 102
Msa0915520 AT3G17360.2 28.188 298 182 10 4 272 208 502 4.85e-22 103
Msa0915520 AT3G17360.1 28.188 298 182 10 4 272 208 502 4.97e-22 103
Msa0915520 AT3G17360.3 28.188 298 182 10 4 272 208 502 5.33e-22 103
Msa0915520 AT3G63480.2 29.455 275 163 10 6 257 48 314 1.29e-21 99.8
Msa0915520 AT5G06670.8 27.969 261 177 5 6 257 107 365 1.42e-21 100
Msa0915520 AT5G06670.4 27.969 261 177 5 6 257 107 365 1.42e-21 100
Msa0915520 AT5G06670.7 27.969 261 177 5 6 257 107 365 1.42e-21 100
Msa0915520 AT5G06670.5 27.969 261 177 5 6 257 107 365 1.51e-21 100
Msa0915520 AT5G06670.2 27.969 261 177 5 6 257 107 365 2.23e-21 100
Msa0915520 AT5G06670.3 27.969 261 177 5 6 257 107 365 2.23e-21 100
Msa0915520 AT3G10180.1 26.882 372 244 10 6 350 40 410 6.08e-21 99.8
Msa0915520 AT3G10180.2 26.882 372 244 10 6 350 40 410 6.16e-21 99.8
Msa0915520 AT1G55550.1 24.375 320 225 8 6 311 130 446 7.15e-21 99.0
Msa0915520 AT3G49650.1 30.035 283 178 8 5 272 65 342 7.44e-21 99.0
Msa0915520 AT1G18410.5 31.298 262 148 8 25 268 543 790 8.16e-21 99.0
Msa0915520 AT1G18410.1 32.000 250 138 8 25 256 696 931 1.19e-20 98.6
Msa0915520 AT5G27550.2 28.674 279 183 9 6 271 177 452 1.24e-20 98.2
Msa0915520 AT5G27550.1 28.674 279 183 9 6 271 177 452 1.24e-20 98.2
Msa0915520 AT1G72250.1 31.276 243 150 6 28 256 557 796 1.88e-20 97.8
Msa0915520 AT1G72250.2 31.276 243 150 6 28 256 566 805 1.91e-20 97.8
Msa0915520 AT3G12020.4 28.517 263 173 6 6 257 110 368 2.08e-20 97.4
Msa0915520 AT3G12020.1 28.517 263 173 6 6 257 110 368 2.08e-20 97.4
Msa0915520 AT1G72250.4 31.276 243 150 6 28 256 577 816 2.11e-20 97.8
Msa0915520 AT1G72250.3 31.276 243 150 6 28 256 578 817 2.30e-20 97.8
Msa0915520 AT1G18410.3 29.588 267 154 7 25 268 553 808 2.48e-20 97.4
Msa0915520 AT1G18410.2 29.588 267 154 7 25 268 553 808 2.48e-20 97.4
Msa0915520 AT3G63480.1 29.391 279 162 11 6 257 48 318 3.02e-20 95.5
Msa0915520 AT3G50240.2 25.228 329 186 12 6 281 64 385 3.05e-20 97.1
Msa0915520 AT1G18410.4 30.196 255 144 7 25 256 696 939 3.54e-20 97.1
Msa0915520 AT3G50240.1 25.228 329 186 12 6 281 64 385 3.75e-20 97.1
Msa0915520 AT3G50240.4 25.228 329 186 12 6 281 64 385 3.90e-20 96.7
Msa0915520 AT3G12020.3 28.517 263 173 6 6 257 110 368 4.55e-20 96.7
Msa0915520 AT3G12020.2 28.517 263 173 6 6 257 110 368 4.55e-20 96.7
Msa0915520 AT3G16630.2 27.586 290 176 13 6 271 243 522 4.88e-20 96.3
Msa0915520 AT3G16630.1 27.586 290 176 13 6 271 243 522 4.88e-20 96.3
Msa0915520 AT1G73860.2 30.924 249 151 7 25 256 490 734 6.73e-20 95.9
Msa0915520 AT1G73860.1 30.924 249 151 7 25 256 573 817 8.54e-20 95.5
Msa0915520 AT3G44050.1 28.322 286 165 10 4 257 133 410 8.95e-20 95.9
Msa0915520 AT1G21730.1 26.667 285 189 10 6 276 116 394 1.10e-19 95.1
Msa0915520 AT3G54870.2 25.545 321 210 9 2 296 145 462 1.75e-19 94.7
Msa0915520 AT3G54870.3 25.545 321 210 9 2 296 145 462 1.77e-19 94.7
Msa0915520 AT3G54870.1 25.545 321 210 9 2 296 145 462 1.87e-19 94.4
Msa0915520 AT3G10310.2 30.483 269 159 11 24 271 424 685 1.87e-19 94.4
Msa0915520 AT3G10310.1 30.483 269 159 11 24 271 424 685 2.67e-19 94.0
Msa0915520 AT5G06670.6 27.037 270 177 6 6 257 107 374 4.62e-19 93.2
Msa0915520 AT5G06670.1 27.037 270 177 6 6 257 107 374 4.62e-19 93.2
Msa0915520 AT5G65460.4 28.077 260 171 5 6 257 181 432 5.72e-19 93.2
Msa0915520 AT5G65460.1 28.077 260 171 5 6 257 181 432 6.66e-19 92.8
Msa0915520 AT5G65460.2 27.692 260 172 6 6 257 181 432 6.67e-19 92.8
Msa0915520 AT5G65460.6 27.692 260 172 6 6 257 181 432 7.78e-19 92.8
Msa0915520 AT3G44730.1 28.819 288 174 13 6 271 423 701 9.64e-19 92.4
Msa0915520 AT3G44730.4 28.819 288 174 13 6 271 423 701 9.64e-19 92.4
Msa0915520 AT3G44730.2 28.819 288 174 13 6 271 468 746 1.01e-18 92.4
Msa0915520 AT3G44730.3 28.819 288 174 13 6 271 468 746 1.01e-18 92.4
Msa0915520 AT5G27000.1 32.271 251 154 10 19 256 453 700 1.19e-18 92.0
Msa0915520 AT4G14150.1 28.873 284 167 12 6 257 126 406 1.59e-18 91.7
Msa0915520 AT1G59540.1 29.658 263 171 8 6 256 44 304 1.87e-18 91.3
Msa0915520 AT5G66310.2 26.022 269 179 9 1 257 62 322 3.07e-18 90.5
Msa0915520 AT5G66310.3 26.022 269 179 9 1 257 62 322 3.07e-18 90.5
Msa0915520 AT5G66310.1 26.022 269 179 9 1 257 62 322 3.07e-18 90.5
Msa0915520 AT3G19050.1 28.763 299 179 15 4 272 233 527 5.27e-18 90.5
Msa0915520 AT4G21270.1 25.818 275 179 6 6 256 478 751 6.05e-18 89.4
Msa0915520 AT3G23670.2 29.771 262 149 11 28 257 153 411 6.24e-18 89.7
Msa0915520 AT3G23670.1 29.057 265 147 12 28 257 153 411 8.61e-18 89.4
Msa0915520 AT3G43210.3 27.652 264 176 8 4 258 72 329 9.86e-18 89.0
Msa0915520 AT3G43210.5 27.652 264 176 8 4 258 72 329 9.86e-18 89.0
Msa0915520 AT3G43210.2 27.652 264 176 8 4 258 72 329 9.86e-18 89.0
Msa0915520 AT3G43210.4 27.652 264 176 8 4 258 72 329 9.86e-18 89.0
Msa0915520 AT3G43210.1 27.652 264 176 8 4 258 72 329 9.86e-18 89.0
Msa0915520 AT5G65460.3 27.715 267 170 6 6 257 181 439 1.25e-17 89.0
Msa0915520 AT4G05190.1 26.812 276 175 7 6 256 475 748 1.35e-17 88.2
Msa0915520 AT4G05190.2 26.812 276 175 7 6 256 462 735 1.42e-17 88.2
Msa0915520 AT2G21300.2 26.692 266 175 8 4 257 69 326 2.62e-17 87.4
Msa0915520 AT2G21300.4 26.692 266 175 8 4 257 69 326 2.62e-17 87.4
Msa0915520 AT2G21300.3 26.692 266 175 8 4 257 69 326 2.62e-17 87.4
Msa0915520 AT2G21300.1 26.692 266 175 8 4 257 69 326 2.62e-17 87.4
Msa0915520 AT2G21300.5 26.692 266 175 8 4 257 69 326 2.62e-17 87.4
Msa0915520 AT2G47500.1 25.746 268 175 8 6 256 443 703 3.22e-17 87.4
Msa0915520 AT2G47500.2 25.746 268 175 8 6 256 443 703 3.70e-17 87.0
Msa0915520 AT1G18370.1 24.534 322 221 10 4 309 76 391 1.16e-16 85.5
Msa0915520 AT5G10470.2 26.814 317 204 14 6 309 185 486 1.39e-16 85.5
Msa0915520 AT5G10470.1 26.814 317 204 14 6 309 185 486 1.43e-16 85.5
Msa0915520 AT1G09170.5 27.208 283 184 12 6 271 479 756 1.74e-16 85.1
Msa0915520 AT1G63640.3 29.412 272 156 10 25 271 536 796 1.88e-16 84.7
Msa0915520 AT1G63640.1 29.412 272 156 10 25 271 536 796 1.95e-16 84.7
Msa0915520 AT1G63640.4 29.412 272 156 10 25 271 536 796 1.95e-16 84.7
Msa0915520 AT1G63640.5 29.412 272 156 10 25 271 526 786 2.01e-16 84.7
Msa0915520 AT1G63640.2 29.368 269 153 10 25 271 536 789 2.06e-16 84.7
Msa0915520 AT5G41310.1 29.961 257 156 9 25 271 486 728 2.38e-16 84.3
Msa0915520 AT4G38950.3 25.940 266 177 8 4 257 58 315 2.86e-16 84.0
Msa0915520 AT4G38950.5 25.940 266 177 8 4 257 58 315 2.86e-16 84.0
Msa0915520 AT4G38950.4 25.940 266 177 8 4 257 58 315 2.86e-16 84.0
Msa0915520 AT4G38950.1 25.940 266 177 8 4 257 58 315 2.86e-16 84.0
Msa0915520 AT4G38950.2 25.940 266 177 8 4 257 58 315 2.86e-16 84.0
Msa0915520 AT3G51150.1 26.022 269 179 9 1 257 61 321 6.49e-16 83.2
Msa0915520 AT1G09170.4 27.612 268 174 11 6 258 479 741 7.04e-16 82.8
Msa0915520 AT3G51150.2 26.022 269 179 9 1 257 61 321 7.39e-16 82.8
Msa0915520 AT3G51150.4 26.022 269 179 9 1 257 61 321 7.39e-16 82.8
Msa0915520 AT3G51150.3 26.022 269 179 9 1 257 61 321 7.39e-16 82.8
Msa0915520 AT1G09170.2 27.612 268 174 11 6 258 479 741 8.36e-16 82.8
Msa0915520 AT1G09170.1 27.206 272 162 10 6 271 479 720 1.21e-15 82.4
Msa0915520 AT5G54670.1 27.941 272 173 8 6 256 443 712 1.52e-15 81.6
Msa0915520 AT5G54670.2 27.941 272 173 8 6 256 443 712 1.52e-15 81.6
Msa0915520 AT1G09170.3 29.317 249 157 10 25 258 497 741 2.26e-15 81.3
Msa0915520 AT1G09170.7 29.317 249 157 10 25 258 497 741 2.26e-15 81.3
Msa0915520 AT5G54670.3 27.941 272 173 8 6 256 383 652 2.65e-15 80.9
Msa0915520 AT4G24170.1 26.592 267 175 10 4 257 48 306 2.50e-14 77.8
Msa0915520 AT4G24170.2 26.592 267 175 10 4 257 48 306 2.50e-14 77.8
Msa0915520 AT1G01950.4 29.388 245 140 9 42 257 1 241 3.74e-14 77.0
Msa0915520 AT4G27180.1 29.134 254 156 9 25 256 452 703 6.89e-14 76.3
Msa0915520 AT4G27180.2 29.134 254 156 9 25 256 452 703 6.89e-14 76.3
Msa0915520 AT1G09170.6 29.614 233 145 10 25 242 497 725 2.40e-13 74.7
Msa0915520 AT1G09170.8 29.614 233 145 10 25 242 497 725 2.40e-13 74.7
Msa0915520 AT3G50240.3 36.607 112 63 3 177 281 173 283 8.27e-13 73.2
Msa0915520 AT5G27950.2 26.147 218 144 4 55 256 1 217 3.40e-12 70.1

Find 153 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCATTCATGCTTTCATTT+TGG 0.083734 6_2:+31936368 None:intergenic
CTTCCAGCATCGGGAGTTCT+TGG 0.198212 6_2:+31933350 None:intergenic
TCCAGAACAACCACATATTT+TGG 0.199476 6_2:-31936660 Msa0915520:CDS
TTTATCCTTATGCAGATTAA+AGG 0.232306 6_2:-31932236 Msa0915520:intron
TAGAGCATCGGAGTCTTTAT+TGG 0.245347 6_2:-31934453 Msa0915520:intron
ACATTCAATTTGCATGGTTC+TGG 0.267061 6_2:-31933101 Msa0915520:CDS
GCAACAAATTCTGCAATAAA+AGG 0.283432 6_2:-31935151 Msa0915520:CDS
CAGCTGTGTTTAAAATTCTA+AGG 0.283512 6_2:+31932969 None:intergenic
ATCTGCTATCGACAAATCTT+TGG 0.284251 6_2:+31933832 None:intergenic
TGTTGACGCTGATACACTTT+GGG 0.291326 6_2:+31935222 None:intergenic
CTTCCAGTATCAGGAGTTCT+TGG 0.299528 6_2:+31933158 None:intergenic
ATTTATTACATCTCGTCTTT+TGG 0.300142 6_2:+31933527 None:intergenic
AGTAAACTCTAGAGTAAATA+AGG 0.304679 6_2:-31934633 Msa0915520:intron
GAATGTTTCCCAAGGACTTT+TGG 0.305549 6_2:+31933118 None:intergenic
ATATCTCATATAAAGGAAAA+TGG 0.312479 6_2:-31935181 Msa0915520:CDS
GTTGTTCTGAAAGGGCTCTT+TGG 0.315176 6_2:-31936807 Msa0915520:intron
CAAGGAGAACAACAACTTAA+TGG 0.316732 6_2:-31933709 Msa0915520:CDS
GAATGTTTCCCAAGGACTTT+TGG 0.318016 6_2:+31933310 None:intergenic
GAATGTTTCCCAAGGACTTT+TGG 0.318016 6_2:+31933503 None:intergenic
GTATGATGAAATTCATATAT+TGG 0.325122 6_2:-31932021 Msa0915520:three_prime_UTR
CCTGACTGAGTCCTTTAAAC+TGG 0.329209 6_2:+31936615 None:intergenic
ATGAAAGCCGTGTTCCCTTC+CGG 0.330850 6_2:-31936092 Msa0915520:CDS
TGAGCTTGCATTGTTCTTTG+TGG 0.332332 6_2:+31935663 None:intergenic
CTCTTTGGAGAGTCCGGGTT+TGG 0.333423 6_2:-31936792 Msa0915520:CDS
CACGGAAGAATCCAGTTTAA+AGG 0.344771 6_2:-31936626 Msa0915520:CDS
TTGGAGTAATTAATGACATA+TGG 0.345690 6_2:+31933851 None:intergenic
TGAAAGCCGTGTTCCCTTCC+GGG 0.346745 6_2:-31936091 Msa0915520:CDS
AGTTCTTGGTTCTGTAATTT+CGG 0.347595 6_2:+31933364 None:intergenic
ACATCTCGTCTTCCAGTATC+AGG 0.352781 6_2:+31933149 None:intergenic
ATTGCAGAATTCTCTTGTTA+AGG 0.355472 6_2:-31932996 Msa0915520:intron
TGCGTGTAAGTTTACTTTCC+CGG 0.358026 6_2:+31936073 None:intergenic
ACATTCAACATGAATGGTTC+TGG 0.364808 6_2:-31933293 Msa0915520:CDS
CGCCTTACTGAATGTTTGTC+AGG 0.366880 6_2:-31936127 Msa0915520:CDS
TTCACGCAATTGAGAACTAA+TGG 0.370766 6_2:+31933665 None:intergenic
GGATGAATTAAAGAAGTTAA+AGG 0.373528 6_2:-31932685 Msa0915520:intron
CATACACTCTTGAAAGGTTC+TGG 0.377624 6_2:+31932527 None:intergenic
ATTGTTCTTTGTGGAATCTA+AGG 0.379097 6_2:+31935672 None:intergenic
TACTACTATTTATAAGCAAT+TGG 0.380392 6_2:-31931949 Msa0915520:three_prime_UTR
TATTTACTCTAGAGTTTACT+TGG 0.381020 6_2:+31934636 None:intergenic
AGGCTCCATATCTCATATAA+AGG 0.393108 6_2:-31935188 Msa0915520:CDS
AAAGGGCTCTTTGGAGAGTC+CGG 0.395682 6_2:-31936798 Msa0915520:intron
GAACCAAGAACTCCTGATAC+TGG 0.399693 6_2:-31933161 Msa0915520:CDS
TTTCTACGAGGTTGATCATC+AGG 0.400292 6_2:-31936705 Msa0915520:CDS
TTATCCTTATGCAGATTAAA+GGG 0.402659 6_2:-31932235 Msa0915520:intron
TTCACGAAGCTCAAGTATAT+AGG 0.404322 6_2:+31932556 None:intergenic
AACAGTACTGTTATTGCTCA+TGG 0.404603 6_2:-31936972 Msa0915520:CDS
GGAAGTGAAGCCTCTTGTTT+CGG 0.405631 6_2:-31937012 Msa0915520:CDS
ACCAAAATATGTGGTTGTTC+TGG 0.408493 6_2:+31936659 None:intergenic
TAAACTTACACGCATATTGC+AGG 0.409523 6_2:-31936064 Msa0915520:CDS
AACTCAGAAATGGATTTAAC+AGG 0.413773 6_2:+31936496 None:intergenic
TTAACAGCTTGATGATTTGA+AGG 0.415735 6_2:-31932383 Msa0915520:intron
TAATGAATACCAAAAGTCCT+TGG 0.423391 6_2:-31933127 Msa0915520:CDS
TAATGAATACCAAAAGTCCT+TGG 0.423391 6_2:-31933319 Msa0915520:CDS
TAAATTCTGGAACTCAGAAA+TGG 0.423566 6_2:+31936486 None:intergenic
CGCTGCATGTTCTGCAAACA+AGG 0.425802 6_2:-31936458 Msa0915520:CDS
TAATAAATACCAAAAGTCCT+TGG 0.425830 6_2:-31933512 Msa0915520:CDS
AGCTTTAACAGCAGAGTGGC+TGG 0.428102 6_2:+31935007 None:intergenic
GGACAAGAGAGAAACAAATA+AGG 0.429051 6_2:-31931972 Msa0915520:three_prime_UTR
TCCCAAAATGAAAGCATGAA+TGG 0.431040 6_2:-31936370 Msa0915520:CDS
TGTGAAATGCATCCGTTCTC+TGG 0.433089 6_2:+31933600 None:intergenic
CATGAATGGTTCTGGAATGA+AGG 0.433280 6_2:-31933285 Msa0915520:intron
CAACAAGCACGGTTCTGAAA+TGG 0.440417 6_2:-31933481 Msa0915520:CDS
GGGATGATGAAGAAGGAAGT+TGG 0.447294 6_2:-31932215 Msa0915520:CDS
GAGTCCGGGTTTGGCAGCGC+TGG 0.448017 6_2:-31936783 Msa0915520:CDS
CTTGATGATTTGAAGGACAT+TGG 0.451063 6_2:-31932376 Msa0915520:CDS
ATTTGATCCCACAGTGGAAA+AGG 0.452582 6_2:-31934041 Msa0915520:intron
TGGGAAACATTCAACATGAA+TGG 0.452823 6_2:-31933299 Msa0915520:CDS
TTGTTGACGCTGATACACTT+TGG 0.453279 6_2:+31935221 None:intergenic
ATGCAGCGATGTATAAATTC+TGG 0.458838 6_2:+31936473 None:intergenic
TTGCCAAGACACTGTTTACA+TGG 0.460798 6_2:-31935881 Msa0915520:CDS
TTTGCATGGTTCTGGAATGA+AGG 0.462616 6_2:-31933093 Msa0915520:intron
ACTAAACTCTAGAGTTGAAA+AGG 0.476895 6_2:-31934306 Msa0915520:intron
AATAAATACCAAAAGTCCTT+GGG 0.481537 6_2:-31933511 Msa0915520:CDS
GACAATTCGTTATCAGAAGA+TGG 0.487981 6_2:-31934341 Msa0915520:CDS
ACATCTCCTCTTCCAGCATC+GGG 0.488796 6_2:+31933341 None:intergenic
GACAATTCAATATCAAAAGA+TGG 0.495617 6_2:-31934668 Msa0915520:CDS
TGGAGTAATTAATGACATAT+GGG 0.497174 6_2:+31933852 None:intergenic
AGAACTCCCGATGCTGGAAG+AGG 0.499921 6_2:-31933347 Msa0915520:CDS
TGCTCTAGTAATATCAGCAA+TGG 0.500299 6_2:+31934469 None:intergenic
CCAGTTTAAAGGACTCAGTC+AGG 0.500631 6_2:-31936615 Msa0915520:intron
AACTAGACAGATAGCGACCT+TGG 0.500907 6_2:-31935785 Msa0915520:CDS
TCTCCAGGTTATTTCGTTCG+AGG 0.503050 6_2:-31933882 Msa0915520:intron
TACGTCTGAGTTTCTCTCCA+TGG 0.503109 6_2:-31936759 Msa0915520:CDS
GAACCAAGAACTCCCGATGC+TGG 0.503898 6_2:-31933353 Msa0915520:CDS
TTTATATGAGATATGGAGCC+TGG 0.506148 6_2:+31935190 None:intergenic
TACATCTCCTCTTCCAGCAT+CGG 0.506442 6_2:+31933340 None:intergenic
ATAATGAAATGATCTATTCA+AGG 0.507697 6_2:-31937034 Msa0915520:CDS
TCACGCAATTGAGAACTAAT+GGG 0.511302 6_2:+31933666 None:intergenic
CTCTGCTGTTAAAGCTGAGA+AGG 0.511849 6_2:-31935000 Msa0915520:intron
CATATTGCAGGACTCCTTGA+GGG 0.518295 6_2:-31936052 Msa0915520:CDS
AATGAATACCAAAAGTCCTT+GGG 0.519400 6_2:-31933126 Msa0915520:CDS
AATGAATACCAAAAGTCCTT+GGG 0.519400 6_2:-31933318 Msa0915520:CDS
AAGGGCTCTTTGGAGAGTCC+GGG 0.524720 6_2:-31936797 Msa0915520:CDS
TTAGGACATACACTCTTGAA+AGG 0.527590 6_2:+31932521 None:intergenic
TGTATAATTGATATTTATGC+TGG 0.528909 6_2:-31932149 Msa0915520:three_prime_UTR
TGGGAAACATTCAATTTGCA+TGG 0.531354 6_2:-31933107 Msa0915520:CDS
GATTAAAGGGATGATGAAGA+AGG 0.531972 6_2:-31932222 Msa0915520:CDS
ATGACAAAGAAAACAAAATG+TGG 0.532687 6_2:-31931994 Msa0915520:three_prime_UTR
CAGGTTACGAAGATGCTAGA+AGG 0.533980 6_2:-31936206 Msa0915520:CDS
GCTCTAGTAATATCAGCAAT+GGG 0.540632 6_2:+31934470 None:intergenic
TCTTGGTTCTGTAATTTCAG+TGG 0.546491 6_2:+31933175 None:intergenic
GCTCATGGAGCTAGAGGCAG+TGG 0.548084 6_2:-31936957 Msa0915520:CDS
GTTGACGCTGATACACTTTG+GGG 0.551189 6_2:+31935223 None:intergenic
CAAATTCTGCAATAAAAGGA+AGG 0.551990 6_2:-31935147 Msa0915520:intron
TTTGAATGCTAGCAGTGAAG+TGG 0.554049 6_2:-31934065 Msa0915520:CDS
TACTTTCCCGGAAGGGAACA+CGG 0.554357 6_2:+31936085 None:intergenic
CGCCTGACAAACATTCAGTA+AGG 0.557288 6_2:+31936125 None:intergenic
TGCTGATATTACTAGAGCAT+CGG 0.557732 6_2:-31934465 Msa0915520:CDS
TTACCATGTAAACAGTGTCT+TGG 0.564565 6_2:+31935878 None:intergenic
TCAAAAGCTGCCGAAACAAG+AGG 0.573031 6_2:+31937002 None:intergenic
GTTTATCCTTGTGGTGCAGT+CGG 0.573539 6_2:-31937091 None:intergenic
GTAGCCAGCGCTGCCAAACC+CGG 0.574308 6_2:+31936779 None:intergenic
TGCTTGTTGAATGTTTCCCA+AGG 0.574406 6_2:+31933495 None:intergenic
TTTCTTCATGGAGTCTAAGG+GGG 0.580173 6_2:+31935819 None:intergenic
TGTAAGTTTACTTTCCCGGA+AGG 0.585542 6_2:+31936077 None:intergenic
GTTATTGCTCATGGAGCTAG+AGG 0.588227 6_2:-31936963 Msa0915520:CDS
TCTTCAAGCACCAAAATATG+TGG 0.588936 6_2:+31936650 None:intergenic
TTCATGTTGAATGTTTCCCA+AGG 0.590050 6_2:+31933302 None:intergenic
GTAAGTTTACTTTCCCGGAA+GGG 0.591065 6_2:+31936078 None:intergenic
AGGAAAAGTAGTGATGCCTC+TGG 0.592724 6_2:-31936186 Msa0915520:CDS
TGCAAATTGAATGTTTCCCA+AGG 0.594254 6_2:+31933110 None:intergenic
TGACAAAGAAAACAAAATGT+GGG 0.598362 6_2:-31931993 Msa0915520:three_prime_UTR
ATTTACTCTAGAGTTTACTT+GGG 0.599756 6_2:+31934637 None:intergenic
GCATATTGCAGGACTCCTTG+AGG 0.599869 6_2:-31936053 Msa0915520:CDS
TAATGAAATGATCTATTCAA+GGG 0.601074 6_2:-31937033 Msa0915520:CDS
CAAGCACGGTTCTGAAATGG+AGG 0.605019 6_2:-31933478 Msa0915520:intron
ACATGGTAAGCTTAGCATCA+CGG 0.605762 6_2:-31935864 Msa0915520:CDS
GCGTCAACAACGAAATTACC+AGG 0.610818 6_2:-31935208 Msa0915520:CDS
TGGGAAACATTCAACAAGCA+CGG 0.615479 6_2:-31933492 Msa0915520:CDS
GTTATTCTCAACATGACCAG+AGG 0.618655 6_2:+31936170 None:intergenic
GCGTGCTCATAGAAGCCACA+TGG 0.618874 6_2:-31936413 Msa0915520:CDS
AACTTTGCTAGTTCCCCTCA+AGG 0.619759 6_2:+31936038 None:intergenic
GATTTAATAAATCGACAGCA+TGG 0.620401 6_2:+31936681 None:intergenic
GCTGATTCAACAAAGAAAAG+CGG 0.621242 6_2:-31935289 Msa0915520:CDS
GTGGTGCAGTCGGTATTCAG+TGG 0.621455 6_2:-31937081 Msa0915520:CDS
GATTTGTCGATAGCAGATGA+AGG 0.623788 6_2:-31933827 Msa0915520:intron
TGTATGCAGTTACCAGAGAA+CGG 0.631429 6_2:-31933612 Msa0915520:CDS
TGAATACCGACTGCACCACA+AGG 0.636242 6_2:+31937085 None:intergenic
CGCAATTGAGAACTAATGGG+TGG 0.654268 6_2:+31933669 None:intergenic
ACAGTGTCTTGGCAAAACGA+TGG 0.658288 6_2:+31935889 None:intergenic
CGTGCTCATAGAAGCCACAT+GGG 0.665446 6_2:-31936412 Msa0915520:CDS
TACAGGTCATAACATGAACA+AGG 0.671212 6_2:-31933727 Msa0915520:intron
ATATTGCAGGACTCCTTGAG+GGG 0.674017 6_2:-31936051 Msa0915520:CDS
TCTGGTAACTGCATACACAA+TGG 0.677862 6_2:+31933618 None:intergenic
AAGTTCAGCAAGACAGACAG+TGG 0.682432 6_2:-31935407 Msa0915520:CDS
AAGTTCAGTAAGACAGAACG+TGG 0.690570 6_2:-31935551 Msa0915520:CDS
AAGTTCAGCAATACATACAG+TGG 0.693549 6_2:-31935359 Msa0915520:CDS
TATAGCAGTTTCTTTCTACG+AGG 0.697044 6_2:-31936717 Msa0915520:CDS
TACAACGCAGAGGCAACTGT+AGG 0.698434 6_2:+31932123 None:intergenic
GAAAATGACATACAACGCAG+AGG 0.710140 6_2:+31932113 None:intergenic
TCTCAGCTTTAACAGCAGAG+TGG 0.715777 6_2:+31935003 None:intergenic
CATGCACAATCAAACCCATG+TGG 0.760510 6_2:+31936398 None:intergenic
AGTGGAATTTGATCCCACAG+TGG 0.794856 6_2:-31934047 Msa0915520:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTAATTTTTTTTGTTG+GGG - chr6_2:31932141-31932160 Msa0915520:three_prime_UTR 10.0%
!!! TCGTTATTAAATTTTAATTT+TGG - chr6_2:31933078-31933097 Msa0915520:intron 10.0%
!! AAATAGATAATCAAATATAA+TGG - chr6_2:31934175-31934194 Msa0915520:intron 10.0%
!!! TTAAATCAATAAAAGTATAT+AGG + chr6_2:31935798-31935817 None:intergenic 10.0%
!! TATATTCATAATATTGTTAA+TGG - chr6_2:31935955-31935974 Msa0915520:intron 10.0%
!! AAGTAAAAAAAAAATGTATT+AGG - chr6_2:31936950-31936969 Msa0915520:CDS 10.0%
!!! ATATTAATTTTTTTTGTTGG+GGG - chr6_2:31932142-31932161 Msa0915520:three_prime_UTR 15.0%
!!! AGCTTTGTATATATTTTATT+AGG - chr6_2:31933905-31933924 Msa0915520:intron 15.0%
!!! GAATATATTTATTTTTTTGC+AGG - chr6_2:31934522-31934541 Msa0915520:intron 15.0%
!!! TGTAGAATATAAATTTTTTC+AGG - chr6_2:31934836-31934855 Msa0915520:intron 15.0%
!!! AATATTTTTTGTTGAAAAGA+AGG + chr6_2:31934863-31934882 None:intergenic 15.0%
!! TCTATTCATAATATTGTTAA+TGG - chr6_2:31935570-31935589 Msa0915520:CDS 15.0%
!!! ATAAAAGTATATAGGTTAAA+AGG + chr6_2:31935790-31935809 None:intergenic 15.0%
!! AAAAATAGTGTAATATTGAA+CGG + chr6_2:31936538-31936557 None:intergenic 15.0%
!! TCTAATAATAATTAATTGTG+AGG - chr6_2:31936562-31936581 Msa0915520:intron 15.0%
!!! TTATATATCTGACATAATTT+TGG - chr6_2:31936594-31936613 Msa0915520:intron 15.0%
!! AATTACACATCATTTATTAT+TGG + chr6_2:31936757-31936776 None:intergenic 15.0%
!! ATAATGAAATGATCTATTCA+AGG - chr6_2:31931986-31932005 Msa0915520:three_prime_UTR 20.0%
!! TAATGAAATGATCTATTCAA+GGG - chr6_2:31931987-31932006 Msa0915520:three_prime_UTR 20.0%
!!! ATTTTCCTTTATATGAGATA+TGG + chr6_2:31933840-31933859 None:intergenic 20.0%
!! ATATCTCATATAAAGGAAAA+TGG - chr6_2:31933839-31933858 Msa0915520:CDS 20.0%
!!! ACTCTTAATAGTTTTTATAC+TGG - chr6_2:31933932-31933951 Msa0915520:intron 20.0%
!! TTGTCATTAAAAATCATAAG+TGG + chr6_2:31934615-31934634 None:intergenic 20.0%
!! AAAACTTTAGCATGTTATAT+TGG - chr6_2:31935071-31935090 Msa0915520:intron 20.0%
!! TCCATTCATAATATTGTTAA+TGG - chr6_2:31935763-31935782 Msa0915520:CDS 20.0%
!! TCCATTAACAATATTATGAA+TGG + chr6_2:31935574-31935593 None:intergenic 20.0%
!! AATAACAAGTAAAAACTGAA+TGG - chr6_2:31936124-31936143 Msa0915520:CDS 20.0%
!! TTGATTTCATATTAACTACA+TGG + chr6_2:31936170-31936189 None:intergenic 20.0%
!!! TTTTTTTCTTGAAAATTGAC+AGG - chr6_2:31936313-31936332 Msa0915520:intron 20.0%
!!! TTTTTTCTTGAAAATTGACA+GGG - chr6_2:31936314-31936333 Msa0915520:intron 20.0%
!! AGAGTCAACTTAATATTAAA+AGG + chr6_2:31936375-31936394 None:intergenic 20.0%
!! ATTAAAGCACAAGATATATT+AGG + chr6_2:31936401-31936420 None:intergenic 20.0%
!!! TTGACTGAACTTTTTATTTT+AGG - chr6_2:31936420-31936439 Msa0915520:CDS 20.0%
!!! TGACTGAACTTTTTATTTTA+GGG - chr6_2:31936421-31936440 Msa0915520:CDS 20.0%
!!! AACTTTTTATTTTAGGGAAT+TGG - chr6_2:31936427-31936446 Msa0915520:CDS 20.0%
!!! AACGGAAAAAAACTTATTTT+AGG + chr6_2:31936520-31936539 None:intergenic 20.0%
!! TTTATTATTGGATTTACTCA+TGG + chr6_2:31936745-31936764 None:intergenic 20.0%
!!! AGCTTTTCAATTAGTTTTAA+TGG - chr6_2:31936830-31936849 Msa0915520:intron 20.0%
!! TGTATAATTGATATTTATGC+TGG - chr6_2:31936871-31936890 Msa0915520:intron 20.0%
!! GTATGATGAAATTCATATAT+TGG - chr6_2:31936999-31937018 Msa0915520:CDS 20.0%
!! TACTACTATTTATAAGCAAT+TGG - chr6_2:31937071-31937090 Msa0915520:CDS 20.0%
!! AGAAAATGTTTTTCACAAGA+AGG + chr6_2:31932176-31932195 None:intergenic 25.0%
!! AACAATTATGTTGTTCTGAA+AGG - chr6_2:31932204-31932223 Msa0915520:CDS 25.0%
!!! ACAATTATGTTGTTCTGAAA+GGG - chr6_2:31932205-31932224 Msa0915520:CDS 25.0%
! CAGGTAAAAATTATTGTAGT+TGG - chr6_2:31932424-31932443 Msa0915520:intron 25.0%
!! CAAAATGAATTTTGTGGATA+TGG - chr6_2:31932682-31932701 Msa0915520:intron 25.0%
!!! CGCTATTATTATTTTTTTCC+TGG - chr6_2:31932741-31932760 Msa0915520:intron 25.0%
!! AGTATTGCACTTTTATTATC+AGG - chr6_2:31932795-31932814 Msa0915520:intron 25.0%
!! ATTTTTCTTTGTGGAATCTA+AGG + chr6_2:31933303-31933322 None:intergenic 25.0%
!!! TATTTTCTTTGAAGAATCTG+AGG + chr6_2:31933495-31933514 None:intergenic 25.0%
!!! AGTTTTTTTTGTTGAATCTG+AGG + chr6_2:31933639-31933658 None:intergenic 25.0%
!! ATAGTTTTTATACTGGTATC+TGG - chr6_2:31933939-31933958 Msa0915520:intron 25.0%
!!! TTTTTCTGTCTGTTTTAATG+AGG - chr6_2:31934083-31934102 Msa0915520:intron 25.0%
! AATTGTAAAGCTTAATCAAC+TGG - chr6_2:31934315-31934334 Msa0915520:CDS 25.0%
! GACAATTCAATATCAAAAGA+TGG - chr6_2:31934352-31934371 Msa0915520:intron 25.0%
!!! ATTTACTCTAGAGTTTACTT+GGG + chr6_2:31934386-31934405 None:intergenic 25.0%
!!! TATTTACTCTAGAGTTTACT+TGG + chr6_2:31934387-31934406 None:intergenic 25.0%
!!! AGTAAACTCTAGAGTAAATA+AGG - chr6_2:31934387-31934406 Msa0915520:intron 25.0%
!! TTTAGTCATGTTAGGATTTT+AGG + chr6_2:31934423-31934442 None:intergenic 25.0%
!!! AAGACATTTTTTTTTTGTCC+AGG + chr6_2:31934777-31934796 None:intergenic 25.0%
!!! TCAGACAAAATGTTTTAACT+TGG + chr6_2:31934888-31934907 None:intergenic 25.0%
! TAATAAATATTTGTGTACGC+AGG - chr6_2:31934922-31934941 Msa0915520:intron 25.0%
!! AGAAGTTTTCATAGAGTAAA+AGG + chr6_2:31935048-31935067 None:intergenic 25.0%
! TGGAGTAATTAATGACATAT+GGG + chr6_2:31935171-31935190 None:intergenic 25.0%
! TTGGAGTAATTAATGACATA+TGG + chr6_2:31935172-31935191 None:intergenic 25.0%
!! ATTTATTACATCTCGTCTTT+TGG + chr6_2:31935496-31935515 None:intergenic 25.0%
! TAATAAATACCAAAAGTCCT+TGG - chr6_2:31935508-31935527 Msa0915520:CDS 25.0%
! AATAAATACCAAAAGTCCTT+GGG - chr6_2:31935509-31935528 Msa0915520:CDS 25.0%
!! CAATAAAAGTATACGTTAGA+AGG + chr6_2:31935982-31936001 None:intergenic 25.0%
! GGATGAATTAAAGAAGTTAA+AGG - chr6_2:31936335-31936354 Msa0915520:CDS 25.0%
! TTTATCCTTATGCAGATTAA+AGG - chr6_2:31936784-31936803 Msa0915520:CDS 25.0%
! TTATCCTTATGCAGATTAAA+GGG - chr6_2:31936785-31936804 Msa0915520:CDS 25.0%
! ATGACAAAGAAAACAAAATG+TGG - chr6_2:31937026-31937045 Msa0915520:CDS 25.0%
! TGACAAAGAAAACAAAATGT+GGG - chr6_2:31937027-31937046 Msa0915520:CDS 25.0%
TGGAAAAACTCACTTAATTC+AGG - chr6_2:31932083-31932102 Msa0915520:three_prime_UTR 30.0%
!!! TTAATTTTTTTTGTTGGGGG+AGG - chr6_2:31932145-31932164 Msa0915520:three_prime_UTR 30.0%
GATTTAATAAATCGACAGCA+TGG + chr6_2:31932342-31932361 None:intergenic 30.0%
! AACTCAGAAATGGATTTAAC+AGG + chr6_2:31932527-31932546 None:intergenic 30.0%
!! TAAATTCTGGAACTCAGAAA+TGG + chr6_2:31932537-31932556 None:intergenic 30.0%
! ACCATTCATGCTTTCATTTT+GGG + chr6_2:31932654-31932673 None:intergenic 30.0%
! TGTGAGCAAAATGAATTTTG+TGG - chr6_2:31932676-31932695 Msa0915520:intron 30.0%
TAAATACTTCAACAAAAGCC+AGG + chr6_2:31932762-31932781 None:intergenic 30.0%
! TGAACTTGCATTTTTCTTTG+TGG + chr6_2:31933312-31933331 None:intergenic 30.0%
ATTGTTCTTTGTGGAATCTA+AGG + chr6_2:31933351-31933370 None:intergenic 30.0%
!!! TTTTTTGTTTGACGAATCTG+TGG + chr6_2:31933399-31933418 None:intergenic 30.0%
! ACTTTTCTTTGTGGAATCTA+AGG + chr6_2:31933447-31933466 None:intergenic 30.0%
GCAACAAATTCTGCAATAAA+AGG - chr6_2:31933869-31933888 Msa0915520:CDS 30.0%
CAAATTCTGCAATAAAAGGA+AGG - chr6_2:31933873-31933892 Msa0915520:CDS 30.0%
TTTATACTGGTATCTGGTTA+TGG - chr6_2:31933945-31933964 Msa0915520:intron 30.0%
! GATATTGACCTTTTTCCTTT+GGG - chr6_2:31933967-31933986 Msa0915520:intron 30.0%
ATATGTATGTGTGTACTGTT+TGG - chr6_2:31934223-31934242 Msa0915520:intron 30.0%
TGTCTAAGTTTAGTCATGTT+AGG + chr6_2:31934431-31934450 None:intergenic 30.0%
AACATGACTAAACTTAGACA+TGG - chr6_2:31934431-31934450 Msa0915520:intron 30.0%
AGAAAGCTCAATACATGAAT+CGG - chr6_2:31934642-31934661 Msa0915520:CDS 30.0%
!! ACTAAACTCTAGAGTTGAAA+AGG - chr6_2:31934714-31934733 Msa0915520:intron 30.0%
! ACATTTTGTCTGATCAGTTA+AGG - chr6_2:31934895-31934914 Msa0915520:intron 30.0%
GGAGACACAATAAAAATAGT+TGG + chr6_2:31935123-31935142 None:intergenic 30.0%
!!! ACTATTTTTATTGTGTCTCC+AGG - chr6_2:31935123-31935142 Msa0915520:intron 30.0%
CACATGATGCGTATTTATAT+AGG - chr6_2:31935257-31935276 Msa0915520:CDS 30.0%
TGAAAGTAAACGTTAGAAGA+AGG + chr6_2:31935597-31935616 None:intergenic 30.0%
!! AGTTCTTGGTTCTGTAATTT+CGG + chr6_2:31935659-31935678 None:intergenic 30.0%
TAATGAATACCAAAAGTCCT+TGG - chr6_2:31935701-31935720 Msa0915520:CDS 30.0%
AATGAATACCAAAAGTCCTT+GGG - chr6_2:31935702-31935721 Msa0915520:CDS 30.0%
TAATGAATACCAAAAGTCCT+TGG - chr6_2:31935701-31935720 Msa0915520:CDS 30.0%
AATGAATACCAAAAGTCCTT+GGG - chr6_2:31935702-31935721 Msa0915520:CDS 30.0%
ATTGCAGAATTCTCTTGTTA+AGG - chr6_2:31936024-31936043 Msa0915520:CDS 30.0%
! CAGCTGTGTTTAAAATTCTA+AGG + chr6_2:31936054-31936073 None:intergenic 30.0%
AAAGAAGTGAGATTTCTCAT+AGG + chr6_2:31936270-31936289 None:intergenic 30.0%
! TTAACAGCTTGATGATTTGA+AGG - chr6_2:31936637-31936656 Msa0915520:CDS 30.0%
AACAGTACTGTTATTGCTCA+TGG - chr6_2:31932048-31932067 Msa0915520:three_prime_UTR 35.0%
!! TTTTCCATTTTTCTCAGCCA+TGG + chr6_2:31932281-31932300 None:intergenic 35.0%
TATAGCAGTTTCTTTCTACG+AGG - chr6_2:31932303-31932322 Msa0915520:intron 35.0%
! TCCAGAACAACCACATATTT+TGG - chr6_2:31932360-31932379 Msa0915520:CDS 35.0%
ACCAAAATATGTGGTTGTTC+TGG + chr6_2:31932364-31932383 None:intergenic 35.0%
TCTTCAAGCACCAAAATATG+TGG + chr6_2:31932373-31932392 None:intergenic 35.0%
!!! ATTTTGGTGCTTGAAGATCA+CGG - chr6_2:31932376-31932395 Msa0915520:CDS 35.0%
ATGCAGCGATGTATAAATTC+TGG + chr6_2:31932550-31932569 None:intergenic 35.0%
! TCCCAAAATGAAAGCATGAA+TGG - chr6_2:31932650-31932669 Msa0915520:intron 35.0%
! GACCATTCATGCTTTCATTT+TGG + chr6_2:31932655-31932674 None:intergenic 35.0%
! ATGAATTTTGTGGATATGGC+AGG - chr6_2:31932686-31932705 Msa0915520:CDS 35.0%
TAGCGATAACTTGACATCTT+CGG + chr6_2:31932726-31932745 None:intergenic 35.0%
TAAACTTACACGCATATTGC+AGG - chr6_2:31932956-31932975 Msa0915520:intron 35.0%
!!! AGTTTTGTTGGTTTCATGCT+TGG - chr6_2:31933001-31933020 Msa0915520:intron 35.0%
TTACCATGTAAACAGTGTCT+TGG + chr6_2:31933145-31933164 None:intergenic 35.0%
! TTTTCTTCATGGAGTCTAAG+GGG + chr6_2:31933205-31933224 None:intergenic 35.0%
! GTTTTCTTCATGGAGTCTAA+GGG + chr6_2:31933206-31933225 None:intergenic 35.0%
! AGTTTTCTTCATGGAGTCTA+AGG + chr6_2:31933207-31933226 None:intergenic 35.0%
! TGAACTTGCAGTTTTCTTCA+TGG + chr6_2:31933216-31933235 None:intergenic 35.0%
! ACTTTTCTTTGTGGAATCCA+AGG + chr6_2:31933255-31933274 None:intergenic 35.0%
! AGAACTTGCACTTTTCTTTG+TGG + chr6_2:31933264-31933283 None:intergenic 35.0%
! TGAACTTGCACTTTTCTTTG+TGG + chr6_2:31933456-31933475 None:intergenic 35.0%
! ACTTTTCTTTGTGGAAGCAA+AGG + chr6_2:31933543-31933562 None:intergenic 35.0%
! TGAACTTGCACTTTTCTTTG+TGG + chr6_2:31933456-31933475 None:intergenic 35.0%
! AGTTTTCTTTGTGGAATCTG+AGG + chr6_2:31933591-31933610 None:intergenic 35.0%
! TGAACTTGCAGTTTTCTTTG+TGG + chr6_2:31933600-31933619 None:intergenic 35.0%
AAGTTCAGCAATACATACAG+TGG - chr6_2:31933661-31933680 Msa0915520:CDS 35.0%
! GCTGATTCAACAAAGAAAAG+CGG - chr6_2:31933731-31933750 Msa0915520:intron 35.0%
TTTATATGAGATATGGAGCC+TGG + chr6_2:31933833-31933852 None:intergenic 35.0%
AGGCTCCATATCTCATATAA+AGG - chr6_2:31933832-31933851 Msa0915520:CDS 35.0%
! GGATATTGACCTTTTTCCTT+TGG - chr6_2:31933966-31933985 Msa0915520:intron 35.0%
AACAATTTCCTTCAACCCAA+AGG + chr6_2:31933985-31934004 None:intergenic 35.0%
! ACAGTAGAGTGAGTATTTTG+AGG + chr6_2:31934060-31934079 None:intergenic 35.0%
TGTTTGGCATATTACTTGTG+AGG - chr6_2:31934239-31934258 Msa0915520:intron 35.0%
! CTCATTTTATCTACCTGACA+TGG - chr6_2:31934462-31934481 Msa0915520:CDS 35.0%
GCTCTAGTAATATCAGCAAT+GGG + chr6_2:31934553-31934572 None:intergenic 35.0%
TGCTCTAGTAATATCAGCAA+TGG + chr6_2:31934554-31934573 None:intergenic 35.0%
TGCTGATATTACTAGAGCAT+CGG - chr6_2:31934555-31934574 Msa0915520:intron 35.0%
TGAATCGGTATATCAAATGC+AGG - chr6_2:31934657-31934676 Msa0915520:CDS 35.0%
GACAATTCGTTATCAGAAGA+TGG - chr6_2:31934679-31934698 Msa0915520:intron 35.0%
! TGAATTACCTTTTCCACTGT+GGG + chr6_2:31934989-31935008 None:intergenic 35.0%
! ATGAATTACCTTTTCCACTG+TGG + chr6_2:31934990-31935009 None:intergenic 35.0%
ATCTGCTATCGACAAATCTT+TGG + chr6_2:31935191-31935210 None:intergenic 35.0%
! TAGGTGTCTTTTGTCATTAC+AGG - chr6_2:31935276-31935295 Msa0915520:CDS 35.0%
TACAGGTCATAACATGAACA+AGG - chr6_2:31935293-31935312 Msa0915520:CDS 35.0%
CAAGGAGAACAACAACTTAA+TGG - chr6_2:31935311-31935330 Msa0915520:CDS 35.0%
TCACGCAATTGAGAACTAAT+GGG + chr6_2:31935357-31935376 None:intergenic 35.0%
TTCACGCAATTGAGAACTAA+TGG + chr6_2:31935358-31935377 None:intergenic 35.0%
! CTTTTGGTATCAAGAGTTGT+TGG + chr6_2:31935480-31935499 None:intergenic 35.0%
TTCATGTTGAATGTTTCCCA+AGG + chr6_2:31935721-31935740 None:intergenic 35.0%
TGGGAAACATTCAACATGAA+TGG - chr6_2:31935721-31935740 Msa0915520:CDS 35.0%
ACATTCAACATGAATGGTTC+TGG - chr6_2:31935727-31935746 Msa0915520:CDS 35.0%
!! TCTTGGTTCTGTAATTTCAG+TGG + chr6_2:31935848-31935867 None:intergenic 35.0%
TGCAAATTGAATGTTTCCCA+AGG + chr6_2:31935913-31935932 None:intergenic 35.0%
TGGGAAACATTCAATTTGCA+TGG - chr6_2:31935913-31935932 Msa0915520:intron 35.0%
ACATTCAATTTGCATGGTTC+TGG - chr6_2:31935919-31935938 Msa0915520:intron 35.0%
AAACACAGCTGAAAAGTAAG+TGG - chr6_2:31936063-31936082 Msa0915520:CDS 35.0%
TTCACGAAGCTCAAGTATAT+AGG + chr6_2:31936467-31936486 None:intergenic 35.0%
TTAGGACATACACTCTTGAA+AGG + chr6_2:31936502-31936521 None:intergenic 35.0%
! CTTGATGATTTGAAGGACAT+TGG - chr6_2:31936644-31936663 Msa0915520:CDS 35.0%
! CATTGGACTTTCTGAAAAAC+AGG - chr6_2:31936661-31936680 Msa0915520:CDS 35.0%
TCATCCCTTTAATCTGCATA+AGG + chr6_2:31936792-31936811 None:intergenic 35.0%
GATTAAAGGGATGATGAAGA+AGG - chr6_2:31936798-31936817 Msa0915520:intron 35.0%
GGACAAGAGAGAAACAAATA+AGG - chr6_2:31937048-31937067 Msa0915520:CDS 35.0%
! TTTCTACGAGGTTGATCATC+AGG - chr6_2:31932315-31932334 Msa0915520:intron 40.0%
CACGGAAGAATCCAGTTTAA+AGG - chr6_2:31932394-31932413 Msa0915520:intron 40.0%
! GTTGTTGCATTTTTGCTTGC+AGG - chr6_2:31932499-31932518 Msa0915520:intron 40.0%
GTTATTCTCAACATGACCAG+AGG + chr6_2:31932853-31932872 None:intergenic 40.0%
GTAAGTTTACTTTCCCGGAA+GGG + chr6_2:31932945-31932964 None:intergenic 40.0%
TGTAAGTTTACTTTCCCGGA+AGG + chr6_2:31932946-31932965 None:intergenic 40.0%
TGCGTGTAAGTTTACTTTCC+CGG + chr6_2:31932950-31932969 None:intergenic 40.0%
!! GGGAACTAGCAAAGTTTTGT+TGG - chr6_2:31932989-31933008 Msa0915520:CDS 40.0%
TTGCCAAGACACTGTTTACA+TGG - chr6_2:31933139-31933158 Msa0915520:CDS 40.0%
ACATGGTAAGCTTAGCATCA+CGG - chr6_2:31933156-31933175 Msa0915520:CDS 40.0%
TTTCTTCATGGAGTCTAAGG+GGG + chr6_2:31933204-31933223 None:intergenic 40.0%
TGAGCTTGCATTGTTCTTTG+TGG + chr6_2:31933360-31933379 None:intergenic 40.0%
AAGTTCAGTAAGACAGAACG+TGG - chr6_2:31933469-31933488 Msa0915520:intron 40.0%
! ACTTTTCTTGGTGGAATCTG+AGG + chr6_2:31933687-31933706 None:intergenic 40.0%
! TGAACTTGCACTTTTCTTGG+TGG + chr6_2:31933696-31933715 None:intergenic 40.0%
! AGCTGAACTTGCACTTTTCT+TGG + chr6_2:31933699-31933718 None:intergenic 40.0%
TGTTGACGCTGATACACTTT+GGG + chr6_2:31933801-31933820 None:intergenic 40.0%
TTGTTGACGCTGATACACTT+TGG + chr6_2:31933802-31933821 None:intergenic 40.0%
!!! ACCTTTTTCCTTTGGGTTGA+AGG - chr6_2:31933974-31933993 Msa0915520:intron 40.0%
TCCTTCAACCCAAAGGAAAA+AGG + chr6_2:31933978-31933997 None:intergenic 40.0%
!! CTGAGCTGGACTAGTATTTA+TGG + chr6_2:31934126-31934145 None:intergenic 40.0%
AGTTTGAGTACAAACTGAGC+TGG + chr6_2:31934140-31934159 None:intergenic 40.0%
GCTCAGTTTGTACTCAAACT+AGG - chr6_2:31934140-31934159 Msa0915520:intron 40.0%
TCAACTGGTGTATCAAATGC+AGG - chr6_2:31934330-31934349 Msa0915520:CDS 40.0%
!! TAGAGCATCGGAGTCTTTAT+TGG - chr6_2:31934567-31934586 Msa0915520:intron 40.0%
TTTGAATGCTAGCAGTGAAG+TGG - chr6_2:31934955-31934974 Msa0915520:intron 40.0%
ATTTGATCCCACAGTGGAAA+AGG - chr6_2:31934979-31934998 Msa0915520:intron 40.0%
TATCCTCGAACGAAATAACC+TGG + chr6_2:31935144-31935163 None:intergenic 40.0%
GATTTGTCGATAGCAGATGA+AGG - chr6_2:31935193-31935212 Msa0915520:CDS 40.0%
TCTGGTAACTGCATACACAA+TGG + chr6_2:31935405-31935424 None:intergenic 40.0%
TGTATGCAGTTACCAGAGAA+CGG - chr6_2:31935408-31935427 Msa0915520:CDS 40.0%
! GAATGTTTCCCAAGGACTTT+TGG + chr6_2:31935520-31935539 None:intergenic 40.0%
! TGCTTGTTGAATGTTTCCCA+AGG + chr6_2:31935528-31935547 None:intergenic 40.0%
TGGGAAACATTCAACAAGCA+CGG - chr6_2:31935528-31935547 Msa0915520:CDS 40.0%
! GAATGTTTCCCAAGGACTTT+TGG + chr6_2:31935520-31935539 None:intergenic 40.0%
!! CATGAATGGTTCTGGAATGA+AGG - chr6_2:31935735-31935754 Msa0915520:CDS 40.0%
! GAATGTTTCCCAAGGACTTT+TGG + chr6_2:31935520-31935539 None:intergenic 40.0%
!! TTTGCATGGTTCTGGAATGA+AGG - chr6_2:31935927-31935946 Msa0915520:intron 40.0%
GAAGTGAGATTTCTCATAGG+AGG + chr6_2:31936267-31936286 None:intergenic 40.0%
CATACACTCTTGAAAGGTTC+TGG + chr6_2:31936496-31936515 None:intergenic 40.0%
GAAAATGACATACAACGCAG+AGG + chr6_2:31936910-31936929 None:intergenic 40.0%
! GGAAGTGAAGCCTCTTGTTT+CGG - chr6_2:31932008-31932027 Msa0915520:three_prime_UTR 45.0%
TCAAAAGCTGCCGAAACAAG+AGG + chr6_2:31932021-31932040 None:intergenic 45.0%
! CTTGTTTCGGCAGCTTTTGA+AGG - chr6_2:31932021-31932040 Msa0915520:three_prime_UTR 45.0%
GTTATTGCTCATGGAGCTAG+AGG - chr6_2:31932057-31932076 Msa0915520:three_prime_UTR 45.0%
!! GTTGTTCTGAAAGGGCTCTT+TGG - chr6_2:31932213-31932232 Msa0915520:CDS 45.0%
TACGTCTGAGTTTCTCTCCA+TGG - chr6_2:31932261-31932280 Msa0915520:intron 45.0%
CTCTCCATGGCTGAGAAAAA+TGG - chr6_2:31932274-31932293 Msa0915520:intron 45.0%
CCTGACTGAGTCCTTTAAAC+TGG + chr6_2:31932408-31932427 None:intergenic 45.0%
CCAGTTTAAAGGACTCAGTC+AGG - chr6_2:31932405-31932424 Msa0915520:intron 45.0%
AACAAGGCTGCACCCAAAAA+AGG - chr6_2:31932578-31932597 Msa0915520:CDS 45.0%
!!! GCACGCTCAATGCCTTTTTT+GGG + chr6_2:31932593-31932612 None:intergenic 45.0%
!!! AGCACGCTCAATGCCTTTTT+TGG + chr6_2:31932594-31932613 None:intergenic 45.0%
CATGCACAATCAAACCCATG+TGG + chr6_2:31932625-31932644 None:intergenic 45.0%
CAGGTTACGAAGATGCTAGA+AGG - chr6_2:31932814-31932833 Msa0915520:intron 45.0%
AGGAAAAGTAGTGATGCCTC+TGG - chr6_2:31932834-31932853 Msa0915520:intron 45.0%
CGCCTTACTGAATGTTTGTC+AGG - chr6_2:31932893-31932912 Msa0915520:intron 45.0%
CGCCTGACAAACATTCAGTA+AGG + chr6_2:31932898-31932917 None:intergenic 45.0%
CATATTGCAGGACTCCTTGA+GGG - chr6_2:31932968-31932987 Msa0915520:CDS 45.0%
ATATTGCAGGACTCCTTGAG+GGG - chr6_2:31932969-31932988 Msa0915520:CDS 45.0%
AACTTTGCTAGTTCCCCTCA+AGG + chr6_2:31932985-31933004 None:intergenic 45.0%
ACAGTGTCTTGGCAAAACGA+TGG + chr6_2:31933134-31933153 None:intergenic 45.0%
AACTAGACAGATAGCGACCT+TGG - chr6_2:31933235-31933254 Msa0915520:intron 45.0%
AAGTTCAGCAAGACAGACAG+TGG - chr6_2:31933613-31933632 Msa0915520:CDS 45.0%
GTTGACGCTGATACACTTTG+GGG + chr6_2:31933800-31933819 None:intergenic 45.0%
GCGTCAACAACGAAATTACC+AGG - chr6_2:31933812-31933831 Msa0915520:intron 45.0%
! TCTCAGCTTTAACAGCAGAG+TGG + chr6_2:31934020-31934039 None:intergenic 45.0%
CTCTGCTGTTAAAGCTGAGA+AGG - chr6_2:31934020-31934039 Msa0915520:intron 45.0%
ATCCCAAGATGAACACAACC+TGG - chr6_2:31934756-31934775 Msa0915520:intron 45.0%
GTCCAGGTTGTGTTCATCTT+GGG + chr6_2:31934761-31934780 None:intergenic 45.0%
TGTCCAGGTTGTGTTCATCT+TGG + chr6_2:31934762-31934781 None:intergenic 45.0%
AGTGGAATTTGATCCCACAG+TGG - chr6_2:31934973-31934992 Msa0915520:intron 45.0%
! TCTCCAGGTTATTTCGTTCG+AGG - chr6_2:31935138-31935157 Msa0915520:intron 45.0%
CGCAATTGAGAACTAATGGG+TGG + chr6_2:31935354-31935373 None:intergenic 45.0%
TGTGAAATGCATCCGTTCTC+TGG + chr6_2:31935423-31935442 None:intergenic 45.0%
!! CAACAAGCACGGTTCTGAAA+TGG - chr6_2:31935539-31935558 Msa0915520:CDS 45.0%
TACATCTCCTCTTCCAGCAT+CGG + chr6_2:31935683-31935702 None:intergenic 45.0%
GAACCAAGAACTCCTGATAC+TGG - chr6_2:31935859-31935878 Msa0915520:CDS 45.0%
CTTCCAGTATCAGGAGTTCT+TGG + chr6_2:31935865-31935884 None:intergenic 45.0%
ACATCTCGTCTTCCAGTATC+AGG + chr6_2:31935874-31935893 None:intergenic 45.0%
GGGATGATGAAGAAGGAAGT+TGG - chr6_2:31936805-31936824 Msa0915520:intron 45.0%
!!! ATTATATTAATTTTTTTTGT+TGG - chr6_2:31932139-31932158 Msa0915520:three_prime_UTR 5.0%
!!! TTATATTAATTTTTTTTGTT+GGG - chr6_2:31932140-31932159 Msa0915520:three_prime_UTR 5.0%
! AAAGGGCTCTTTGGAGAGTC+CGG - chr6_2:31932222-31932241 Msa0915520:CDS 50.0%
CGCTGCATGTTCTGCAAACA+AGG - chr6_2:31932562-31932581 Msa0915520:CDS 50.0%
CGTGCTCATAGAAGCCACAT+GGG - chr6_2:31932608-31932627 Msa0915520:intron 50.0%
CTTGACATCTTCGGTTGAGC+AGG + chr6_2:31932717-31932736 None:intergenic 50.0%
ATGAAAGCCGTGTTCCCTTC+CGG - chr6_2:31932928-31932947 Msa0915520:intron 50.0%
TACTTTCCCGGAAGGGAACA+CGG + chr6_2:31932938-31932957 None:intergenic 50.0%
GCATATTGCAGGACTCCTTG+AGG - chr6_2:31932967-31932986 Msa0915520:CDS 50.0%
! AGCTTTAACAGCAGAGTGGC+TGG + chr6_2:31934016-31934035 None:intergenic 50.0%
CTCTCACAGTTGTCCATGTC+AGG + chr6_2:31934478-31934497 None:intergenic 50.0%
CTGACATGGACAACTGTGAG+AGG - chr6_2:31934476-31934495 Msa0915520:CDS 50.0%
!! CAAGCACGGTTCTGAAATGG+AGG - chr6_2:31935542-31935561 Msa0915520:CDS 50.0%
ACATCTCCTCTTCCAGCATC+GGG + chr6_2:31935682-31935701 None:intergenic 50.0%
TACAACGCAGAGGCAACTGT+AGG + chr6_2:31936900-31936919 None:intergenic 50.0%
GTGGTGCAGTCGGTATTCAG+TGG - chr6_2:31931939-31931958 Msa0915520:three_prime_UTR 55.0%
! AAGGGCTCTTTGGAGAGTCC+GGG - chr6_2:31932223-31932242 Msa0915520:CDS 55.0%
! CTCTTTGGAGAGTCCGGGTT+TGG - chr6_2:31932228-31932247 Msa0915520:intron 55.0%
GCGTGCTCATAGAAGCCACA+TGG - chr6_2:31932607-31932626 Msa0915520:intron 55.0%
TGAAAGCCGTGTTCCCTTCC+GGG - chr6_2:31932929-31932948 Msa0915520:intron 55.0%
GAACCAAGAACTCCCGATGC+TGG - chr6_2:31935667-31935686 Msa0915520:CDS 55.0%
! CTTCCAGCATCGGGAGTTCT+TGG + chr6_2:31935673-31935692 None:intergenic 55.0%
AGAACTCCCGATGCTGGAAG+AGG - chr6_2:31935673-31935692 Msa0915520:CDS 55.0%
GCTCATGGAGCTAGAGGCAG+TGG - chr6_2:31932063-31932082 Msa0915520:three_prime_UTR 60.0%
GTAGCCAGCGCTGCCAAACC+CGG + chr6_2:31932244-31932263 None:intergenic 65.0%
GAGTCCGGGTTTGGCAGCGC+TGG - chr6_2:31932237-31932256 Msa0915520:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 31931937 31937105 31931937 ID=Msa0915520;Name=Msa0915520
chr6_2 mRNA 31931937 31937105 31931937 ID=Msa0915520-mRNA-1;Parent=Msa0915520;Name=Msa0915520-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.94|0.84|1|1|1|19|262|854
chr6_2 exon 31931937 31932243 31931937 ID=Msa0915520-mRNA-1:exon:5771;Parent=Msa0915520-mRNA-1
chr6_2 exon 31932360 31932398 31932360 ID=Msa0915520-mRNA-1:exon:5770;Parent=Msa0915520-mRNA-1
chr6_2 exon 31932532 31932600 31932532 ID=Msa0915520-mRNA-1:exon:5769;Parent=Msa0915520-mRNA-1
chr6_2 exon 31932686 31932707 31932686 ID=Msa0915520-mRNA-1:exon:5768;Parent=Msa0915520-mRNA-1
chr6_2 exon 31932965 31933011 31932965 ID=Msa0915520-mRNA-1:exon:5767;Parent=Msa0915520-mRNA-1
chr6_2 exon 31933094 31933201 31933094 ID=Msa0915520-mRNA-1:exon:5766;Parent=Msa0915520-mRNA-1
chr6_2 exon 31933286 31933393 31933286 ID=Msa0915520-mRNA-1:exon:5765;Parent=Msa0915520-mRNA-1
chr6_2 exon 31933479 31933744 31933479 ID=Msa0915520-mRNA-1:exon:5764;Parent=Msa0915520-mRNA-1
chr6_2 exon 31933828 31933897 31933828 ID=Msa0915520-mRNA-1:exon:5763;Parent=Msa0915520-mRNA-1
chr6_2 exon 31934042 31934098 31934042 ID=Msa0915520-mRNA-1:exon:5762;Parent=Msa0915520-mRNA-1
chr6_2 exon 31934307 31934363 31934307 ID=Msa0915520-mRNA-1:exon:5761;Parent=Msa0915520-mRNA-1
chr6_2 exon 31934454 31934498 31934454 ID=Msa0915520-mRNA-1:exon:5760;Parent=Msa0915520-mRNA-1
chr6_2 exon 31934634 31934690 31934634 ID=Msa0915520-mRNA-1:exon:5759;Parent=Msa0915520-mRNA-1
chr6_2 exon 31935001 31935046 31935001 ID=Msa0915520-mRNA-1:exon:5758;Parent=Msa0915520-mRNA-1
chr6_2 exon 31935148 31935914 31935148 ID=Msa0915520-mRNA-1:exon:5757;Parent=Msa0915520-mRNA-1
chr6_2 exon 31936020 31936225 31936020 ID=Msa0915520-mRNA-1:exon:5756;Parent=Msa0915520-mRNA-1
chr6_2 exon 31936335 31936521 31936335 ID=Msa0915520-mRNA-1:exon:5755;Parent=Msa0915520-mRNA-1
chr6_2 exon 31936616 31936816 31936616 ID=Msa0915520-mRNA-1:exon:5754;Parent=Msa0915520-mRNA-1
chr6_2 exon 31936938 31937105 31936938 ID=Msa0915520-mRNA-1:exon:5753;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31936938 31937105 31936938 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31936616 31936816 31936616 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31936335 31936521 31936335 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31936020 31936225 31936020 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31935148 31935914 31935148 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31935001 31935046 31935001 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31934634 31934690 31934634 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31934454 31934498 31934454 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31934307 31934363 31934307 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31934042 31934098 31934042 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31933828 31933897 31933828 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31933479 31933744 31933479 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31933286 31933393 31933286 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31933094 31933201 31933094 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31932965 31933011 31932965 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31932686 31932707 31932686 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31932532 31932600 31932532 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31932360 31932398 31932360 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 CDS 31932199 31932243 31932199 ID=Msa0915520-mRNA-1:cds;Parent=Msa0915520-mRNA-1
chr6_2 three_prime_UTR 31931937 31932198 31931937 ID=Msa0915520-mRNA-1:three_prime_utr;Parent=Msa0915520-mRNA-1
Gene Sequence

>Msa0915520

TTGTGGTGCAGTCGGTATTCAGTGGACTACTGCTATAACGAACATGATGATAATGAAATGATCTATTCAAGGGAAGTGAAGCCTCTTGTTTCGGCAGCTTTTGAAGGTTTTAACAGTACTGTTATTGCTCATGGAGCTAGAGGCAGTGGAAAAACTCACTTAATTCAGGGCTCTTTGGAGAGTCCGGGTTTGGCAGCGCTGGCTACGTCTGAGTTTCTCTCCATGGCTGAGAAAAATGGAAAATCTATAGCAGTTTCTTTCTACGAGGTTGATCATCAGGACCATGCTGTCGATTTATTAAATCCAGAACAACCACATATTTTGGTGCTTGAAGATCACGGAAGAATCCAGTTTAAAGGACTCAGTCAGGCTCCTGTTAAATCCATTTCTGAGTTCCAGAATTTATACATCGCTGCATGTTCTGCAAACAAGGCTGCACCCAAAAAAGGCATTGAGCGTGCTCATAGAAGCCACATGGGTTTGATTGTGCATGTCTTTTCCCAAAATGAAAGCATGAATGGTCTTGTGAGCAAAATGAATTTTGTGGATATGGCAGGTTACGAAGATGCTAGAAGGAAAAGTAGTGATGCCTCTGGTCATGTTGAGAATAACAAACTTAACAAGTCAATTTACGCCTTACTGAATGTTTGTCAGGCGTTGAGTACAAATGAAAGCCGTGTTCCCTTCCGGGAAAGTAAACTTACACGCATATTGCAGGACTCCTTGAGGGGAACTAGCAAAGTTTTGTTGGTTTCATGCTTGAATCCATCGTTTTGCCAAGACACTGTTTACATGGTAAGCTTAGCATCACGGTCATGTCAATCGATTCATCAAACCCCCTTAGACTCCATGAAGAAAACTGCAAGTTCAACTAGACAGATAGCGACCTTGGATTCCACAAAGAAAAGTGCAAGTTCTGCAAGAGAGATAGCAACCTTAGATTCCACAAAGAAAAATGCAAGTTCAGCAAGAAAAATAGTGACCTTAGATTCCACAAAGAACAATGCAAGCTCAGTAAGACAGAACGTAGCCACAGATTCGTCAAACAAAAAATCAAGCTCAGTAAGACAGACAGTAACCTTAGATTCCACAAAGAAAAGTGCAAGTTCAGTAAGACAGAACGTGGCCTCAGATTCTTCAAAGAAAATATCAAGTTCAGTAAGACAGACAGTAACCTTTGCTTCCACAAAGAAAAGTGCAAGTTCAGCAATACAGACAGTGACCTCAGATTCCACAAAGAAAACTGCAAGTTCAGCAAGACAGACAGTGGCCTCAGATTCAACAAAAAAAACTGCAAGTTCAGCAATACATACAGTGGCCTCAGATTCCACCAAGAAAAGTGCAAGTTCAGCTATACAGATAGTAGCTGATTCAACAAAGAAAAGCGGAAATTCAGCAATACTGACAGTGACTTATCGCAAAAAAAAGATACCCCAAAGTGTATCAGCGTCAACAACGAAATTACCAGGCTCCATATCTCATATAAAGGAAAATGGTGTTATTGCAACAAATTCTGCAATAAAAGGAAGGAAATTGTTTGATGAAGCCAGCCACTCTGCTGTTAAAGCTGAGAAGGACAATTCAATATCAAAAGATGGAAATGACGCCCAAGTAAACTCTAGAGTAAATAAGGAAATTCCCATTGCTGATATTACTAGAGCATCGGAGTCTTTATTGGACAATTCGTTATCAGAAGATGGAAATCACGATGAACTAAACTCTAGAGTTGAAAAGGATAACTCATCTTTGAATGCTAGCAGTGAAGTGGAATTTGATCCCACAGTGGAAAAGGTTATTTCGTTCGAGGATAAACACCCATATGTCATTAATTACTCCAAAGATTTGTCGATAGCAGATGAAGGTCATAACATGAACAAGGAGAACAACAACTTAATGGAAAATGAAGATTTTTCACCACCCATTAGTTCTCAATTGCGTGAACTTCAATCTCTCGTTTCGTCAACTCCATTGTGTATGCAGTTACCAGAGAACGGATGCATTTCACATGACGATGATCAGATTTCTGCTAAAATTGCAGAACCAACAACTCTTGATACCAAAAGACGAGATGTAATAAATACCAAAAGTCCTTGGGAAACATTCAACAAGCACGGTTCTGAAATGGAGAATTCAACCGAAATTACAGAACCAAGAACTCCCGATGCTGGAAGAGGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAACATGAATGGTTCTGGAATGAAGAATTCCACTGAAATTACAGAACCAAGAACTCCTGATACTGGAAGACGAGATGTAATGAATACCAAAAGTCCTTGGGAAACATTCAATTTGCATGGTTCTGGAATGAAGAATTCTCTTGTTAAGGACTACCTTAGAATTTTAAACACAGCTGAAAAGGATGAATTAAAGAAGTTAAAGGGAATTGGAGAGAAGAGAGCAACCTATATACTTGAGCTTCGTGAAGAATCTCCAGAACCTTTCAAGAGTCTTGATGATTTGAAGGACATTGGACTTTCTGAAAAACAGATTAAAGGGATGATGAAGAAGGAAGTTGGAGAGCTTTTCAATTAG

Protein sequence

>Msa0915520

LWCSRYSVDYCYNEHDDNEMIYSREVKPLVSAAFEGFNSTVIAHGARGSGKTHLIQGSLESPGLAALATSEFLSMAEKNGKSIAVSFYEVDHQDHAVDLLNPEQPHILVLEDHGRIQFKGLSQAPVKSISEFQNLYIAACSANKAAPKKGIERAHRSHMGLIVHVFSQNESMNGLVSKMNFVDMAGYEDARRKSSDASGHVENNKLNKSIYALLNVCQALSTNESRVPFRESKLTRILQDSLRGTSKVLLVSCLNPSFCQDTVYMVSLASRSCQSIHQTPLDSMKKTASSTRQIATLDSTKKSASSAREIATLDSTKKNASSARKIVTLDSTKNNASSVRQNVATDSSNKKSSSVRQTVTLDSTKKSASSVRQNVASDSSKKISSSVRQTVTFASTKKSASSAIQTVTSDSTKKTASSARQTVASDSTKKTASSAIHTVASDSTKKSASSAIQIVADSTKKSGNSAILTVTYRKKKIPQSVSASTTKLPGSISHIKENGVIATNSAIKGRKLFDEASHSAVKAEKDNSISKDGNDAQVNSRVNKEIPIADITRASESLLDNSLSEDGNHDELNSRVEKDNSSLNASSEVEFDPTVEKVISFEDKHPYVINYSKDLSIADEGHNMNKENNNLMENEDFSPPISSQLRELQSLVSSTPLCMQLPENGCISHDDDQISAKIAEPTTLDTKRRDVINTKSPWETFNKHGSEMENSTEITEPRTPDAGRGDVMNTKSPWETFNMNGSGMKNSTEITEPRTPDTGRRDVMNTKSPWETFNLHGSGMKNSLVKDYLRILNTAEKDELKKLKGIGEKRATYILELREESPEPFKSLDDLKDIGLSEKQIKGMMKKEVGELFN*