Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35136.t1 | XP_004504703.1 | 100 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 5.20E-42 | 179.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35136.t1 | Q9FKB0 | 95.3 | 85 | 4 | 0 | 1 | 85 | 1 | 85 | 1.3e-41 | 169.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35136.t1 | A0A0B0NQ45 | 100.0 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 3.7e-42 | 179.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35136.t1 | MTR_4g094600 | 100.000 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 1.21e-59 | 177 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35136.t1 | AT5G48870 | 95.294 | 85 | 4 | 0 | 1 | 85 | 1 | 85 | 1.46e-55 | 166 |
Find 21 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAGCAGCATTGTTCATTC+TGG | 0.260713 | 4.4:-19537288 | None:intergenic |
CATAAACATCAAAGCCTCTA+AGG | 0.282210 | 4.4:-19535434 | None:intergenic |
GAGCTTGTTGGTACCCTTAG+AGG | 0.311837 | 4.4:+19535420 | MS.gene35136:CDS |
CCATCACAGCTTCTTCCATC+AGG | 0.419048 | 4.4:+19535246 | MS.gene35136:CDS |
ACTATTCAGTAACATCTTCA+AGG | 0.420043 | 4.4:-19535467 | None:intergenic |
AGCATTGTTCATTCTGGATC+AGG | 0.435725 | 4.4:-19537282 | None:intergenic |
GAGCTGATTGACCGCTGTAT+AGG | 0.443634 | 4.4:+19535363 | MS.gene35136:intron |
CTTTGATGTTTATGTTAACA+TGG | 0.481181 | 4.4:+19535443 | MS.gene35136:CDS |
TGTGCAATGCAGTTGGTCCC+TGG | 0.507142 | 4.4:+19537252 | MS.gene35136:intron |
AGATCACTGCTGAGGGGAGA+AGG | 0.509229 | 4.4:+19537027 | MS.gene35136:CDS |
AAAGGCGACAAGGAGCTTGT+TGG | 0.513402 | 4.4:+19535408 | MS.gene35136:CDS |
AAAATATGGGTGATAATGAA+AGG | 0.540065 | 4.4:+19535390 | MS.gene35136:CDS |
CCTGATGGAAGAAGCTGTGA+TGG | 0.541063 | 4.4:-19535246 | None:intergenic |
ATAAACATCAAAGCCTCTAA+GGG | 0.563111 | 4.4:-19535433 | None:intergenic |
TCTGGATCAGGTGAACCACC+AGG | 0.582965 | 4.4:-19537270 | None:intergenic |
AACAGCGAGATCACTGCTGA+GGG | 0.596820 | 4.4:+19537020 | MS.gene35136:intron |
CAACAGCGAGATCACTGCTG+AGG | 0.645210 | 4.4:+19537019 | MS.gene35136:intron |
GGTGATAATGAAAGGCGACA+AGG | 0.648287 | 4.4:+19535398 | MS.gene35136:CDS |
GCAATGCAGTTGGTCCCTGG+TGG | 0.679569 | 4.4:+19537255 | MS.gene35136:intron |
CTGGATCAGGTGAACCACCA+GGG | 0.706934 | 4.4:-19537269 | None:intergenic |
ACAGCGAGATCACTGCTGAG+GGG | 0.753357 | 4.4:+19537021 | MS.gene35136:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATATACCATAGAATTT+AGG | - | chr4.4:19537134-19537153 | None:intergenic | 15.0% |
!!! | AAATGCATTTTAAAAATTTG+AGG | - | chr4.4:19535678-19535697 | None:intergenic | 15.0% |
!!! | AATGCATTTTAAAAATTTGA+GGG | - | chr4.4:19535677-19535696 | None:intergenic | 15.0% |
!! | ACAAAAGTTCAAATTAAGAT+AGG | - | chr4.4:19535982-19536001 | None:intergenic | 20.0% |
!! | ATAAACTAAATCAATTTGTG+AGG | - | chr4.4:19536983-19537002 | None:intergenic | 20.0% |
!! | ATGTAAACATTCATAAAAGT+TGG | - | chr4.4:19535752-19535771 | None:intergenic | 20.0% |
!! | TATTAATAAATCATTTGACC+TGG | + | chr4.4:19537147-19537166 | MS.gene35136:intron | 20.0% |
!! | TGTAAACATTCATAAAAGTT+GGG | - | chr4.4:19535751-19535770 | None:intergenic | 20.0% |
!! | TTAAGATTTAAGAAAGTGAA+GGG | + | chr4.4:19535929-19535948 | MS.gene35136:intron | 20.0% |
!! | TTCTATTTACCTAAATTCTA+TGG | + | chr4.4:19537122-19537141 | MS.gene35136:intron | 20.0% |
!! | TTTCAAATTTCTATGTTTCT+TGG | + | chr4.4:19536486-19536505 | MS.gene35136:intron | 20.0% |
!!! | TGTTTACATTTAATTTGAAC+TGG | + | chr4.4:19535763-19535782 | MS.gene35136:intron | 20.0% |
!!! | TTTTAAAATGCATTTCTAAC+TGG | + | chr4.4:19535683-19535702 | MS.gene35136:intron | 20.0% |
! | AGACTTTCTTACCTTTATAA+TGG | + | chr4.4:19536877-19536896 | MS.gene35136:intron | 25.0% |
! | AGTTTAAAAGATGACAATGT+CGG | - | chr4.4:19536566-19536585 | None:intergenic | 25.0% |
! | ATTAACTTAGTACATGAAAG+AGG | - | chr4.4:19536717-19536736 | None:intergenic | 25.0% |
! | CTGTATAGGTTCAAAAATAT+GGG | + | chr4.4:19535377-19535396 | MS.gene35136:CDS | 25.0% |
! | CTTTGATGTTTATGTTAACA+TGG | + | chr4.4:19535443-19535462 | MS.gene35136:CDS | 25.0% |
! | GGGAAATGAAAGTAAATATA+TGG | - | chr4.4:19536153-19536172 | None:intergenic | 25.0% |
! | GTAAACATTCATAAAAGTTG+GGG | - | chr4.4:19535750-19535769 | None:intergenic | 25.0% |
! | GTTAAGATTTAAGAAAGTGA+AGG | + | chr4.4:19535928-19535947 | MS.gene35136:intron | 25.0% |
! | TTGTTGGCACAAAAAAATAT+TGG | + | chr4.4:19535875-19535894 | MS.gene35136:intron | 25.0% |
!! | AAAATATGGGTGATAATGAA+AGG | + | chr4.4:19535390-19535409 | MS.gene35136:CDS | 25.0% |
!! | AATTTTTCCTTTATGCATTG+AGG | - | chr4.4:19536283-19536302 | None:intergenic | 25.0% |
!! | ACCAACTATGTTTTTCTAAT+TGG | + | chr4.4:19536654-19536673 | MS.gene35136:intron | 25.0% |
!! | AGTTTAGGTTTAGTTTATCA+TGG | + | chr4.4:19536620-19536639 | MS.gene35136:intron | 25.0% |
!! | CCAACTATGTTTTTCTAATT+GGG | + | chr4.4:19536655-19536674 | MS.gene35136:intron | 25.0% |
!! | CTTGATCAAATTTTACTCAA+TGG | + | chr4.4:19537059-19537078 | MS.gene35136:CDS | 25.0% |
!! | TGAGAATTTGAAACTTACAA+TGG | - | chr4.4:19537096-19537115 | None:intergenic | 25.0% |
!! | TTGGATAAAAGCATAAAATG+TGG | - | chr4.4:19535506-19535525 | None:intergenic | 25.0% |
!!! | ATATTTTTGAACCTATACAG+CGG | - | chr4.4:19535377-19535396 | None:intergenic | 25.0% |
!!! | GTTTGAAATTCAAGTTGTTT+GGG | + | chr4.4:19535897-19535916 | MS.gene35136:intron | 25.0% |
AAACAGAGTTCAAGCAATAT+TGG | - | chr4.4:19535309-19535328 | None:intergenic | 30.0% | |
AAAGAACATGTTTGATGAGT+AGG | + | chr4.4:19535606-19535625 | MS.gene35136:intron | 30.0% | |
AACAATCAGATATGCACAAT+AGG | - | chr4.4:19535579-19535598 | None:intergenic | 30.0% | |
AACAGAGTTCAAGCAATATT+GGG | - | chr4.4:19535308-19535327 | None:intergenic | 30.0% | |
ACTAGAAAAATGATTGGAGA+TGG | - | chr4.4:19535282-19535301 | None:intergenic | 30.0% | |
ACTATTCAGTAACATCTTCA+AGG | - | chr4.4:19535470-19535489 | None:intergenic | 30.0% | |
AGACACAAAAGCCATTATAA+AGG | - | chr4.4:19536891-19536910 | None:intergenic | 30.0% | |
ATAAACATCAAAGCCTCTAA+GGG | - | chr4.4:19535436-19535455 | None:intergenic | 30.0% | |
ATAACAATCAAGTGAAGTCA+AGG | - | chr4.4:19536091-19536110 | None:intergenic | 30.0% | |
ATTCAACGATATTGACCATA+AGG | - | chr4.4:19536046-19536065 | None:intergenic | 30.0% | |
CCCAATTAGAAAAACATAGT+TGG | - | chr4.4:19536658-19536677 | None:intergenic | 30.0% | |
CGATTATGAAAGTAGGTAAT+TGG | + | chr4.4:19535826-19535845 | MS.gene35136:intron | 30.0% | |
GCTGTATAGGTTCAAAAATA+TGG | + | chr4.4:19535376-19535395 | MS.gene35136:CDS | 30.0% | |
GGGTTAACTAGAAAAATGAT+TGG | - | chr4.4:19535288-19535307 | None:intergenic | 30.0% | |
TAAGTCTAGGTTAAGAGTTT+AGG | + | chr4.4:19536605-19536624 | MS.gene35136:intron | 30.0% | |
TACCTACTTTCATAATCGTT+GGG | - | chr4.4:19535824-19535843 | None:intergenic | 30.0% | |
TCAGCTAGTTAAGACTTAAA+AGG | + | chr4.4:19536367-19536386 | MS.gene35136:intron | 30.0% | |
TTACCTACTTTCATAATCGT+TGG | - | chr4.4:19535825-19535844 | None:intergenic | 30.0% | |
TTGACCATAAGGTTATGATT+TGG | - | chr4.4:19536035-19536054 | None:intergenic | 30.0% | |
! | ATTTTGTGGAGTTATCAACA+TGG | - | chr4.4:19536247-19536266 | None:intergenic | 30.0% |
! | CACTTGATTGTTATTAGCAA+GGG | + | chr4.4:19536097-19536116 | MS.gene35136:intron | 30.0% |
! | GATAAGTCATTCGAATTTTG+TGG | - | chr4.4:19536261-19536280 | None:intergenic | 30.0% |
! | TCACTTGATTGTTATTAGCA+AGG | + | chr4.4:19536096-19536115 | MS.gene35136:intron | 30.0% |
! | TTTACGTGTTTGTTACTCAA+GGG | + | chr4.4:19535648-19535667 | MS.gene35136:intron | 30.0% |
! | TTTTGTGGAGTTATCAACAT+GGG | - | chr4.4:19536246-19536265 | None:intergenic | 30.0% |
!! | GGTTTGAAATTCAAGTTGTT+TGG | + | chr4.4:19535896-19535915 | MS.gene35136:intron | 30.0% |
AAACTCCTTTAGCATGCATA+GGG | - | chr4.4:19536469-19536488 | None:intergenic | 35.0% | |
AACATGTTTGATGAGTAGGA+AGG | + | chr4.4:19535610-19535629 | MS.gene35136:intron | 35.0% | |
AACTGAAAGTTACAGGATGT+TGG | - | chr4.4:19536328-19536347 | None:intergenic | 35.0% | |
AAGAGCTAACTGAAAGTTAC+AGG | - | chr4.4:19536335-19536354 | None:intergenic | 35.0% | |
ACCTACTTTCATAATCGTTG+GGG | - | chr4.4:19535823-19535842 | None:intergenic | 35.0% | |
ACGACCAAATCATAACCTTA+TGG | + | chr4.4:19536028-19536047 | MS.gene35136:intron | 35.0% | |
AGGCTTTCTCATTTGGTTAT+TGG | - | chr4.4:19536174-19536193 | None:intergenic | 35.0% | |
CAGAACATCAGTAAGTTCTT+TGG | - | chr4.4:19535525-19535544 | None:intergenic | 35.0% | |
CATAAACATCAAAGCCTCTA+AGG | - | chr4.4:19535437-19535456 | None:intergenic | 35.0% | |
GACTTATCCTCAATGCATAA+AGG | + | chr4.4:19536273-19536292 | MS.gene35136:intron | 35.0% | |
GGAACTCATAATACTCTACA+GGG | - | chr4.4:19536545-19536564 | None:intergenic | 35.0% | |
GGCTTTCTCATTTGGTTATT+GGG | - | chr4.4:19536173-19536192 | None:intergenic | 35.0% | |
GTAATTGGTCACTGGTAAAT+GGG | + | chr4.4:19535841-19535860 | MS.gene35136:intron | 35.0% | |
GTTGTTCATTCTCCTTGATT+TGG | + | chr4.4:19536926-19536945 | MS.gene35136:intron | 35.0% | |
TCAAGTGAAGTCAAGGATAA+TGG | - | chr4.4:19536084-19536103 | None:intergenic | 35.0% | |
TCTTGGAGCTATATAGCTAA+GGG | + | chr4.4:19536503-19536522 | MS.gene35136:intron | 35.0% | |
TCTTTCTCAGTGGATATTTC+TGG | + | chr4.4:19536834-19536853 | MS.gene35136:intron | 35.0% | |
TTCTTGGAGCTATATAGCTA+AGG | + | chr4.4:19536502-19536521 | MS.gene35136:intron | 35.0% | |
! | AGACACGTGTTATTAAGTCT+AGG | + | chr4.4:19536592-19536611 | MS.gene35136:intron | 35.0% |
! | AGTTTTTCCTAGTGTCATAG+CGG | + | chr4.4:19537213-19537232 | MS.gene35136:intron | 35.0% |
! | CTTTACGTGTTTGTTACTCA+AGG | + | chr4.4:19535647-19535666 | MS.gene35136:intron | 35.0% |
!! | AGTACATGAAAGAGGCATTA+TGG | - | chr4.4:19536709-19536728 | None:intergenic | 35.0% |
!!! | ATGGGTGTTTTTGGATTTGT+TGG | + | chr4.4:19535859-19535878 | MS.gene35136:intron | 35.0% |
!!! | TTTTAGAGCATCTTTCTCAG+TGG | + | chr4.4:19536824-19536843 | MS.gene35136:intron | 35.0% |
ACACACATGTACAGGATTAG+GGG | - | chr4.4:19536762-19536781 | None:intergenic | 40.0% | |
AGACCTGCATGTAGTTACTT+TGG | - | chr4.4:19536400-19536419 | None:intergenic | 40.0% | |
AGAGATTTGCGATGAATGAG+AGG | - | chr4.4:19536194-19536213 | None:intergenic | 40.0% | |
ATGTGTGTGCCAAGGAATAA+GGG | + | chr4.4:19536774-19536793 | MS.gene35136:intron | 40.0% | |
ATTTGGTCGTCCATGGTTAA+TGG | - | chr4.4:19536018-19536037 | None:intergenic | 40.0% | |
CACACACATGTACAGGATTA+GGG | - | chr4.4:19536763-19536782 | None:intergenic | 40.0% | |
CCTACTTTCATAATCGTTGG+GGG | - | chr4.4:19535822-19535841 | None:intergenic | 40.0% | |
CGGAACTCATAATACTCTAC+AGG | - | chr4.4:19536546-19536565 | None:intergenic | 40.0% | |
CTACGAACAACCATTAACCA+TGG | + | chr4.4:19536005-19536024 | MS.gene35136:intron | 40.0% | |
GAAACTCCTTTAGCATGCAT+AGG | - | chr4.4:19536470-19536489 | None:intergenic | 40.0% | |
GAAAGTAGGTAATTGGTCAC+TGG | + | chr4.4:19535833-19535852 | MS.gene35136:intron | 40.0% | |
GAATGAGAGGCTTTCTCATT+TGG | - | chr4.4:19536181-19536200 | None:intergenic | 40.0% | |
GAGTAACAAACACGTAAAGC+TGG | - | chr4.4:19535646-19535665 | None:intergenic | 40.0% | |
GATGGTGAAATCAAACCTGA+TGG | - | chr4.4:19535264-19535283 | None:intergenic | 40.0% | |
GGGTACTTTCATATTTGCAG+AGG | - | chr4.4:19536226-19536245 | None:intergenic | 40.0% | |
GGTAATTGGTCACTGGTAAA+TGG | + | chr4.4:19535840-19535859 | MS.gene35136:intron | 40.0% | |
! | ACCTGCATGTAGTTACTTTG+GGG | - | chr4.4:19536398-19536417 | None:intergenic | 40.0% |
! | AGCAAGGGTTCATCTAGAAT+CGG | + | chr4.4:19536112-19536131 | MS.gene35136:intron | 40.0% |
! | CAACATTTTGCAAAGTTGCC+AGG | - | chr4.4:19537168-19537187 | None:intergenic | 40.0% |
! | CACTGGTAAATGGGTGTTTT+TGG | + | chr4.4:19535850-19535869 | MS.gene35136:intron | 40.0% |
! | GACCTGCATGTAGTTACTTT+GGG | - | chr4.4:19536399-19536418 | None:intergenic | 40.0% |
! | TACAGGGCATTACTTAGAGA+GGG | - | chr4.4:19536529-19536548 | None:intergenic | 40.0% |
ACTTTCATAATCGTTGGGGG+AGG | - | chr4.4:19535819-19535838 | None:intergenic | 45.0% | |
CACACATGTACAGGATTAGG+GGG | - | chr4.4:19536761-19536780 | None:intergenic | 45.0% | |
CATGTGTGTGCCAAGGAATA+AGG | + | chr4.4:19536773-19536792 | MS.gene35136:intron | 45.0% | |
CCCCCAACGATTATGAAAGT+AGG | + | chr4.4:19535819-19535838 | MS.gene35136:intron | 45.0% | |
CTTTCATAATCGTTGGGGGA+GGG | - | chr4.4:19535818-19535837 | None:intergenic | 45.0% | |
GAACTCCCTATGCATGCTAA+AGG | + | chr4.4:19536461-19536480 | MS.gene35136:intron | 45.0% | |
GCACACACATGTACAGGATT+AGG | - | chr4.4:19536764-19536783 | None:intergenic | 45.0% | |
GCGCATGAACATCCAAATCA+AGG | - | chr4.4:19536941-19536960 | None:intergenic | 45.0% | |
TATGTGGTGTGCAATGCAGT+TGG | + | chr4.4:19537245-19537264 | MS.gene35136:intron | 45.0% | |
TGTGTGTGCCAAGGAATAAG+GGG | + | chr4.4:19536775-19536794 | MS.gene35136:intron | 45.0% | |
TTCATGCGCACACACACATA+TGG | + | chr4.4:19536952-19536971 | MS.gene35136:intron | 45.0% | |
TTCCTACAGACCTCACTCAA+GGG | - | chr4.4:19536444-19536463 | None:intergenic | 45.0% | |
TTTCATAATCGTTGGGGGAG+GGG | - | chr4.4:19535817-19535836 | None:intergenic | 45.0% | |
! | CTACAGGGCATTACTTAGAG+AGG | - | chr4.4:19536530-19536549 | None:intergenic | 45.0% |
! | GGTGATAATGAAAGGCGACA+AGG | + | chr4.4:19535398-19535417 | MS.gene35136:CDS | 45.0% |
! | GTCTGAAACCCCTTATTCCT+TGG | - | chr4.4:19536786-19536805 | None:intergenic | 45.0% |
! | TCATCTAGAATCGGTGCAAG+AGG | + | chr4.4:19536121-19536140 | MS.gene35136:intron | 45.0% |
!! | ACAGGATGTTGGCTAGTCTT+CGG | - | chr4.4:19536317-19536336 | None:intergenic | 45.0% |
!! | ATAGCGGTACTGACAGTATG+TGG | + | chr4.4:19537229-19537248 | MS.gene35136:intron | 45.0% |
!! | GGTTATGATTTGGTCGTCCA+TGG | - | chr4.4:19536025-19536044 | None:intergenic | 45.0% |
AAAGGCGACAAGGAGCTTGT+TGG | + | chr4.4:19535408-19535427 | MS.gene35136:CDS | 50.0% | |
AACAGCGAGATCACTGCTGA+GGG | + | chr4.4:19537020-19537039 | MS.gene35136:intron | 50.0% | |
ACCTCACTCAAGGGGTAGAT+GGG | - | chr4.4:19536435-19536454 | None:intergenic | 50.0% | |
CCATCACAGCTTCTTCCATC+AGG | + | chr4.4:19535246-19535265 | MS.gene35136:CDS | 50.0% | |
CCTGATGGAAGAAGCTGTGA+TGG | - | chr4.4:19535249-19535268 | None:intergenic | 50.0% | |
GAGCTGATTGACCGCTGTAT+AGG | + | chr4.4:19535363-19535382 | MS.gene35136:intron | 50.0% | |
GCCCCAAAGTAACTACATGC+AGG | + | chr4.4:19536394-19536413 | MS.gene35136:intron | 50.0% | |
GTCAGTACCGCTATGACACT+AGG | - | chr4.4:19537223-19537242 | None:intergenic | 50.0% | |
GTTCCTACAGACCTCACTCA+AGG | - | chr4.4:19536445-19536464 | None:intergenic | 50.0% | |
TCCTACAGACCTCACTCAAG+GGG | - | chr4.4:19536443-19536462 | None:intergenic | 50.0% | |
TCCTGTACATGTGTGTGCCA+AGG | + | chr4.4:19536766-19536785 | MS.gene35136:intron | 50.0% | |
TCCTTGGCACACACATGTAC+AGG | - | chr4.4:19536770-19536789 | None:intergenic | 50.0% | |
TTCATAATCGTTGGGGGAGG+GGG | - | chr4.4:19535816-19535835 | None:intergenic | 50.0% | |
!! | CAGGATGTTGGCTAGTCTTC+GGG | - | chr4.4:19536316-19536335 | None:intergenic | 50.0% |
!! | GAGCTTGTTGGTACCCTTAG+AGG | + | chr4.4:19535420-19535439 | MS.gene35136:CDS | 50.0% |
ACAGCGAGATCACTGCTGAG+GGG | + | chr4.4:19537021-19537040 | MS.gene35136:intron | 55.0% | |
ACCCATCTACCCCTTGAGTG+AGG | + | chr4.4:19536431-19536450 | MS.gene35136:intron | 55.0% | |
ACCCCTTGAGTGAGGTCTGT+AGG | + | chr4.4:19536439-19536458 | MS.gene35136:intron | 55.0% | |
AGATCACTGCTGAGGGGAGA+AGG | + | chr4.4:19537027-19537046 | MS.gene35136:CDS | 55.0% | |
CAACAGCGAGATCACTGCTG+AGG | + | chr4.4:19537019-19537038 | MS.gene35136:intron | 55.0% | |
CTGGATCAGGTGAACCACCA+GGG | - | chr4.4:19537272-19537291 | None:intergenic | 55.0% | |
GACCTCACTCAAGGGGTAGA+TGG | - | chr4.4:19536436-19536455 | None:intergenic | 55.0% | |
TCATAATCGTTGGGGGAGGG+GGG | - | chr4.4:19535815-19535834 | None:intergenic | 55.0% | |
TCTGGATCAGGTGAACCACC+AGG | - | chr4.4:19537273-19537292 | None:intergenic | 55.0% | |
TGTGCAATGCAGTTGGTCCC+TGG | + | chr4.4:19537252-19537271 | MS.gene35136:intron | 55.0% | |
!! | GGCTAGTCTTCGGGCTATGA+AGG | - | chr4.4:19536307-19536326 | None:intergenic | 55.0% |
GCAATGCAGTTGGTCCCTGG+TGG | + | chr4.4:19537255-19537274 | MS.gene35136:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 19535234 | 19537296 | 19535234 | ID=MS.gene35136 |
chr4.4 | mRNA | 19535234 | 19537296 | 19535234 | ID=MS.gene35136.t1;Parent=MS.gene35136 |
chr4.4 | exon | 19535234 | 19535267 | 19535234 | ID=MS.gene35136.t1.exon1;Parent=MS.gene35136.t1 |
chr4.4 | CDS | 19535234 | 19535267 | 19535234 | ID=cds.MS.gene35136.t1;Parent=MS.gene35136.t1 |
chr4.4 | exon | 19535364 | 19535487 | 19535364 | ID=MS.gene35136.t1.exon2;Parent=MS.gene35136.t1 |
chr4.4 | CDS | 19535364 | 19535487 | 19535364 | ID=cds.MS.gene35136.t1;Parent=MS.gene35136.t1 |
chr4.4 | exon | 19537025 | 19537097 | 19537025 | ID=MS.gene35136.t1.exon3;Parent=MS.gene35136.t1 |
chr4.4 | CDS | 19537025 | 19537097 | 19537025 | ID=cds.MS.gene35136.t1;Parent=MS.gene35136.t1 |
chr4.4 | exon | 19537264 | 19537296 | 19537264 | ID=MS.gene35136.t1.exon4;Parent=MS.gene35136.t1 |
chr4.4 | CDS | 19537264 | 19537296 | 19537264 | ID=cds.MS.gene35136.t1;Parent=MS.gene35136.t1 |
Gene Sequence |
Protein sequence |