Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023131.t1 | XP_004504703.1 | 100 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 5.20E-42 | 179.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023131.t1 | Q9FKB0 | 95.3 | 85 | 4 | 0 | 1 | 85 | 1 | 85 | 1.3e-41 | 169.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023131.t1 | A0A0B0NQ45 | 100.0 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 3.7e-42 | 179.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023131.t1 | MTR_4g094600 | 100.000 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 1.21e-59 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023131.t1 | AT5G48870 | 95.294 | 85 | 4 | 0 | 1 | 85 | 1 | 85 | 1.46e-55 | 166 |
Find 21 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGCAGCATTGTTCATTC+TGG | 0.260713 | 4.3:-19121578 | None:intergenic |
| CATAAACATCAAAGCCTCTA+AGG | 0.282210 | 4.3:-19119726 | None:intergenic |
| GAGCTTGTTGGTACCCTTAG+AGG | 0.311837 | 4.3:+19119712 | MS.gene023131:CDS |
| CCATCACAGCTTCTTCCATC+AGG | 0.419048 | 4.3:+19119538 | MS.gene023131:CDS |
| ACTATTCAGTAACATCTTCA+AGG | 0.420043 | 4.3:-19119759 | None:intergenic |
| AGCATTGTTCATTCTGGATC+AGG | 0.435725 | 4.3:-19121572 | None:intergenic |
| GAGCTGATTGACCGCTGTAT+AGG | 0.443634 | 4.3:+19119655 | MS.gene023131:intron |
| CTTTGATGTTTATGTTAACA+TGG | 0.481181 | 4.3:+19119735 | MS.gene023131:CDS |
| TGTGCAATGCAGTTGGTCCC+TGG | 0.507142 | 4.3:+19121542 | MS.gene023131:intron |
| AGATCACTGCTGAGGGGAGA+AGG | 0.509229 | 4.3:+19121317 | MS.gene023131:CDS |
| AAAGGCGACAAGGAGCTTGT+TGG | 0.513402 | 4.3:+19119700 | MS.gene023131:CDS |
| AAAATATGGGTGATAATGAA+AGG | 0.540065 | 4.3:+19119682 | MS.gene023131:CDS |
| CCTGATGGAAGAAGCTGTGA+TGG | 0.541063 | 4.3:-19119538 | None:intergenic |
| ATAAACATCAAAGCCTCTAA+GGG | 0.563111 | 4.3:-19119725 | None:intergenic |
| TCTGGATCAGGTGAACCACC+AGG | 0.582965 | 4.3:-19121560 | None:intergenic |
| GACAGCGAGATCACTGCTGA+GGG | 0.604836 | 4.3:+19121310 | MS.gene023131:intron |
| CGACAGCGAGATCACTGCTG+AGG | 0.647520 | 4.3:+19121309 | MS.gene023131:intron |
| GGTGATAATGAAAGGCGACA+AGG | 0.648287 | 4.3:+19119690 | MS.gene023131:CDS |
| GCAATGCAGTTGGTCCCTGG+TGG | 0.679569 | 4.3:+19121545 | MS.gene023131:intron |
| CTGGATCAGGTGAACCACCA+GGG | 0.706934 | 4.3:-19121559 | None:intergenic |
| ACAGCGAGATCACTGCTGAG+GGG | 0.743727 | 4.3:+19121311 | MS.gene023131:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATACCATAGAATTT+AGG | - | chr4.3:19121424-19121443 | None:intergenic | 15.0% |
| !!! | AAATGCATTTTAAAAATTTG+AGG | - | chr4.3:19119968-19119987 | None:intergenic | 15.0% |
| !!! | AATGCATTTTAAAAATTTGA+GGG | - | chr4.3:19119967-19119986 | None:intergenic | 15.0% |
| !! | ACAAAAGTTCAAATTAAGAT+AGG | - | chr4.3:19120272-19120291 | None:intergenic | 20.0% |
| !! | ATAAACTAAATCAATTTGTG+AGG | - | chr4.3:19121273-19121292 | None:intergenic | 20.0% |
| !! | ATGTAAACATTCATAAAAGT+TGG | - | chr4.3:19120042-19120061 | None:intergenic | 20.0% |
| !! | TGTAAACATTCATAAAAGTT+GGG | - | chr4.3:19120041-19120060 | None:intergenic | 20.0% |
| !! | TTAAGATTTAAGAAAGTGAA+GGG | + | chr4.3:19120219-19120238 | MS.gene023131:intron | 20.0% |
| !! | TTCTATTTACCTAAATTCTA+TGG | + | chr4.3:19121412-19121431 | MS.gene023131:intron | 20.0% |
| !!! | TGTTTACATTTAATTTGAAC+TGG | + | chr4.3:19120053-19120072 | MS.gene023131:intron | 20.0% |
| !!! | TTTTAAAATGCATTTCTAAC+TGG | + | chr4.3:19119973-19119992 | MS.gene023131:intron | 20.0% |
| ! | AAAGAACATATTTGATTGGT+AGG | + | chr4.3:19119896-19119915 | MS.gene023131:intron | 25.0% |
| ! | AGACTTTCTTACCTTTATAA+TGG | + | chr4.3:19121167-19121186 | MS.gene023131:intron | 25.0% |
| ! | AGTTTAAAAGATGACAATGT+CGG | - | chr4.3:19120856-19120875 | None:intergenic | 25.0% |
| ! | ATTAACTTAGTACATGAAAG+AGG | - | chr4.3:19121007-19121026 | None:intergenic | 25.0% |
| ! | CTGTAAAGAACATATTTGAT+TGG | + | chr4.3:19119892-19119911 | MS.gene023131:intron | 25.0% |
| ! | CTGTATAGGTTCAAAAATAT+GGG | + | chr4.3:19119669-19119688 | MS.gene023131:CDS | 25.0% |
| ! | CTTTGATGTTTATGTTAACA+TGG | + | chr4.3:19119735-19119754 | MS.gene023131:CDS | 25.0% |
| ! | GGGAAATGAAAGTAAATATA+TGG | - | chr4.3:19120443-19120462 | None:intergenic | 25.0% |
| ! | GTAAACATTCATAAAAGTTG+GGG | - | chr4.3:19120040-19120059 | None:intergenic | 25.0% |
| ! | GTTAAGATTTAAGAAAGTGA+AGG | + | chr4.3:19120218-19120237 | MS.gene023131:intron | 25.0% |
| ! | TATTAATGAATCATTTGACC+TGG | + | chr4.3:19121437-19121456 | MS.gene023131:intron | 25.0% |
| ! | TCTCAAATTTCTATGTTTCT+TGG | + | chr4.3:19120776-19120795 | MS.gene023131:intron | 25.0% |
| ! | TTGTTGGCACAAAAAAATAT+TGG | + | chr4.3:19120165-19120184 | MS.gene023131:intron | 25.0% |
| !! | AAAATATGGGTGATAATGAA+AGG | + | chr4.3:19119682-19119701 | MS.gene023131:CDS | 25.0% |
| !! | AATTTTTCCTTTATGCATTG+AGG | - | chr4.3:19120573-19120592 | None:intergenic | 25.0% |
| !! | ACCAACTATGTTTTTCTAAT+TGG | + | chr4.3:19120944-19120963 | MS.gene023131:intron | 25.0% |
| !! | AGTTTAGGTTTAGTTTATCA+TGG | + | chr4.3:19120910-19120929 | MS.gene023131:intron | 25.0% |
| !! | ATGGATAAAAGCATAAAATG+TGG | - | chr4.3:19119798-19119817 | None:intergenic | 25.0% |
| !! | CCAACTATGTTTTTCTAATT+GGG | + | chr4.3:19120945-19120964 | MS.gene023131:intron | 25.0% |
| !! | CTTGATCAAATTTTACTCAA+TGG | + | chr4.3:19121349-19121368 | MS.gene023131:CDS | 25.0% |
| !! | TGAGAATTTGAAACTTACAA+TGG | - | chr4.3:19121386-19121405 | None:intergenic | 25.0% |
| !!! | ATATTTTTGAACCTATACAG+CGG | - | chr4.3:19119669-19119688 | None:intergenic | 25.0% |
| !!! | GTTTGAAATTCAAGTTGTTT+GGG | + | chr4.3:19120187-19120206 | MS.gene023131:intron | 25.0% |
| AAACAGAGTTCAAGCAATAT+TGG | - | chr4.3:19119601-19119620 | None:intergenic | 30.0% | |
| AACAATCAGATATGCACAAT+AGG | - | chr4.3:19119869-19119888 | None:intergenic | 30.0% | |
| AACAGAGTTCAAGCAATATT+GGG | - | chr4.3:19119600-19119619 | None:intergenic | 30.0% | |
| AACATATTTGATTGGTAGGA+AGG | + | chr4.3:19119900-19119919 | MS.gene023131:intron | 30.0% | |
| ACTAGAAAAATGATTGGAGA+TGG | - | chr4.3:19119574-19119593 | None:intergenic | 30.0% | |
| ACTATTCAGTAACATCTTCA+AGG | - | chr4.3:19119762-19119781 | None:intergenic | 30.0% | |
| AGACACAAAAGCCATTATAA+AGG | - | chr4.3:19121181-19121200 | None:intergenic | 30.0% | |
| AGACACATGTTATTAAGTCT+AGG | + | chr4.3:19120882-19120901 | MS.gene023131:intron | 30.0% | |
| ATAAACATCAAAGCCTCTAA+GGG | - | chr4.3:19119728-19119747 | None:intergenic | 30.0% | |
| ATAACAATCAAGTGAAGTCA+AGG | - | chr4.3:19120381-19120400 | None:intergenic | 30.0% | |
| ATTCAACGATATTGACCATA+AGG | - | chr4.3:19120336-19120355 | None:intergenic | 30.0% | |
| CCCAATTAGAAAAACATAGT+TGG | - | chr4.3:19120948-19120967 | None:intergenic | 30.0% | |
| CGATTATGAAAGTAGGTAAT+TGG | + | chr4.3:19120116-19120135 | MS.gene023131:intron | 30.0% | |
| GCTGTATAGGTTCAAAAATA+TGG | + | chr4.3:19119668-19119687 | MS.gene023131:CDS | 30.0% | |
| GGGTTAACTAGAAAAATGAT+TGG | - | chr4.3:19119580-19119599 | None:intergenic | 30.0% | |
| TAAGTCTAGGTTAAGAGTTT+AGG | + | chr4.3:19120895-19120914 | MS.gene023131:intron | 30.0% | |
| TACCTACTTTCATAATCGTT+GGG | - | chr4.3:19120114-19120133 | None:intergenic | 30.0% | |
| TCAGCTAGTTAAGACTTAAA+AGG | + | chr4.3:19120657-19120676 | MS.gene023131:intron | 30.0% | |
| TTACCTACTTTCATAATCGT+TGG | - | chr4.3:19120115-19120134 | None:intergenic | 30.0% | |
| TTGACCATAAGGTTATGATT+TGG | - | chr4.3:19120325-19120344 | None:intergenic | 30.0% | |
| ! | ATTTTGTGGAGTTATCAACA+TGG | - | chr4.3:19120537-19120556 | None:intergenic | 30.0% |
| ! | CACTTGATTGTTATTAGCAA+GGG | + | chr4.3:19120387-19120406 | MS.gene023131:intron | 30.0% |
| ! | GATAAGTCATTCGAATTTTG+TGG | - | chr4.3:19120551-19120570 | None:intergenic | 30.0% |
| ! | TCACTTGATTGTTATTAGCA+AGG | + | chr4.3:19120386-19120405 | MS.gene023131:intron | 30.0% |
| ! | TTTACGTGTTTGTTACTCAA+GGG | + | chr4.3:19119938-19119957 | MS.gene023131:intron | 30.0% |
| ! | TTTTGTGGAGTTATCAACAT+GGG | - | chr4.3:19120536-19120555 | None:intergenic | 30.0% |
| !! | GGTTTGAAATTCAAGTTGTT+TGG | + | chr4.3:19120186-19120205 | MS.gene023131:intron | 30.0% |
| AACTGAAAGTTACAGGATGT+TGG | - | chr4.3:19120618-19120637 | None:intergenic | 35.0% | |
| AAGAGCTAACTGAAAGTTAC+AGG | - | chr4.3:19120625-19120644 | None:intergenic | 35.0% | |
| ACCTACTTTCATAATCGTTG+GGG | - | chr4.3:19120113-19120132 | None:intergenic | 35.0% | |
| ACGACCAAATCATAACCTTA+TGG | + | chr4.3:19120318-19120337 | MS.gene023131:intron | 35.0% | |
| AGGCTTTCTCATTTGGTTAT+TGG | - | chr4.3:19120464-19120483 | None:intergenic | 35.0% | |
| CAGAACATCAGTAAGTTCTA+TGG | - | chr4.3:19119817-19119836 | None:intergenic | 35.0% | |
| CATAAACATCAAAGCCTCTA+AGG | - | chr4.3:19119729-19119748 | None:intergenic | 35.0% | |
| GACTTATCCTCAATGCATAA+AGG | + | chr4.3:19120563-19120582 | MS.gene023131:intron | 35.0% | |
| GGAACTCATAATACTCTACA+GGG | - | chr4.3:19120835-19120854 | None:intergenic | 35.0% | |
| GGCTTTCTCATTTGGTTATT+GGG | - | chr4.3:19120463-19120482 | None:intergenic | 35.0% | |
| GTAATTGGTCACTGGTAAAT+GGG | + | chr4.3:19120131-19120150 | MS.gene023131:intron | 35.0% | |
| GTTGTTCATTCTCCTTGATT+TGG | + | chr4.3:19121216-19121235 | MS.gene023131:intron | 35.0% | |
| TCAAGTGAAGTCAAGGATAA+TGG | - | chr4.3:19120374-19120393 | None:intergenic | 35.0% | |
| TCTTGGAGCTATATAGCTAA+GGG | + | chr4.3:19120793-19120812 | MS.gene023131:intron | 35.0% | |
| TCTTTCTCAGTGGATATTTC+TGG | + | chr4.3:19121124-19121143 | MS.gene023131:intron | 35.0% | |
| TTCTTGGAGCTATATAGCTA+AGG | + | chr4.3:19120792-19120811 | MS.gene023131:intron | 35.0% | |
| ! | AGTTTTTCCTAGTGTCATAG+CGG | + | chr4.3:19121503-19121522 | MS.gene023131:intron | 35.0% |
| ! | CTTTACGTGTTTGTTACTCA+AGG | + | chr4.3:19119937-19119956 | MS.gene023131:intron | 35.0% |
| !! | AGTACATGAAAGAGGCATTA+TGG | - | chr4.3:19120999-19121018 | None:intergenic | 35.0% |
| !!! | ATGGGTGTTTTTGGATTTGT+TGG | + | chr4.3:19120149-19120168 | MS.gene023131:intron | 35.0% |
| !!! | TTTTAGAGCATCTTTCTCAG+TGG | + | chr4.3:19121114-19121133 | MS.gene023131:intron | 35.0% |
| ACACACATGTACAGGATTAG+GGG | - | chr4.3:19121052-19121071 | None:intergenic | 40.0% | |
| AGACCTGCATGTAGTTACTT+TGG | - | chr4.3:19120690-19120709 | None:intergenic | 40.0% | |
| AGACTCCTTTAGCATGCATA+GGG | - | chr4.3:19120759-19120778 | None:intergenic | 40.0% | |
| AGAGATTTGCGATGAATGAG+AGG | - | chr4.3:19120484-19120503 | None:intergenic | 40.0% | |
| ATGTGTGTGCCAAGGAATAA+GGG | + | chr4.3:19121064-19121083 | MS.gene023131:intron | 40.0% | |
| ATTTGGTCGTCCATGGTTAA+TGG | - | chr4.3:19120308-19120327 | None:intergenic | 40.0% | |
| CACACACATGTACAGGATTA+GGG | - | chr4.3:19121053-19121072 | None:intergenic | 40.0% | |
| CCTACTTTCATAATCGTTGG+GGG | - | chr4.3:19120112-19120131 | None:intergenic | 40.0% | |
| CGGAACTCATAATACTCTAC+AGG | - | chr4.3:19120836-19120855 | None:intergenic | 40.0% | |
| CTACGAACAACCATTAACCA+TGG | + | chr4.3:19120295-19120314 | MS.gene023131:intron | 40.0% | |
| GAAAGTAGGTAATTGGTCAC+TGG | + | chr4.3:19120123-19120142 | MS.gene023131:intron | 40.0% | |
| GAATGAGAGGCTTTCTCATT+TGG | - | chr4.3:19120471-19120490 | None:intergenic | 40.0% | |
| GAGTAACAAACACGTAAAGC+TGG | - | chr4.3:19119936-19119955 | None:intergenic | 40.0% | |
| GATGGTGAAATCAAACCTGA+TGG | - | chr4.3:19119556-19119575 | None:intergenic | 40.0% | |
| GGGTACTTTCATATTTGCAG+AGG | - | chr4.3:19120516-19120535 | None:intergenic | 40.0% | |
| GGTAATTGGTCACTGGTAAA+TGG | + | chr4.3:19120130-19120149 | MS.gene023131:intron | 40.0% | |
| ! | ACCTGCATGTAGTTACTTTG+GGG | - | chr4.3:19120688-19120707 | None:intergenic | 40.0% |
| ! | AGCAAGGGTTCATCTAGAAT+CGG | + | chr4.3:19120402-19120421 | MS.gene023131:intron | 40.0% |
| ! | CAACATTTTGCAAAGTTGCC+AGG | - | chr4.3:19121458-19121477 | None:intergenic | 40.0% |
| ! | CACTGGTAAATGGGTGTTTT+TGG | + | chr4.3:19120140-19120159 | MS.gene023131:intron | 40.0% |
| ! | GACCTGCATGTAGTTACTTT+GGG | - | chr4.3:19120689-19120708 | None:intergenic | 40.0% |
| ! | TACAGGGCATTACTTAGAGA+GGG | - | chr4.3:19120819-19120838 | None:intergenic | 40.0% |
| ACTTTCATAATCGTTGGGGG+AGG | - | chr4.3:19120109-19120128 | None:intergenic | 45.0% | |
| CACACATGTACAGGATTAGG+GGG | - | chr4.3:19121051-19121070 | None:intergenic | 45.0% | |
| CATGTGTGTGCCAAGGAATA+AGG | + | chr4.3:19121063-19121082 | MS.gene023131:intron | 45.0% | |
| CCCCCAACGATTATGAAAGT+AGG | + | chr4.3:19120109-19120128 | MS.gene023131:intron | 45.0% | |
| CTTTCATAATCGTTGGGGGA+GGG | - | chr4.3:19120108-19120127 | None:intergenic | 45.0% | |
| GAACTCCCTATGCATGCTAA+AGG | + | chr4.3:19120751-19120770 | MS.gene023131:intron | 45.0% | |
| GAGACTCCTTTAGCATGCAT+AGG | - | chr4.3:19120760-19120779 | None:intergenic | 45.0% | |
| GCACACACATGTACAGGATT+AGG | - | chr4.3:19121054-19121073 | None:intergenic | 45.0% | |
| GCGCATGAACATCCAAATCA+AGG | - | chr4.3:19121231-19121250 | None:intergenic | 45.0% | |
| TATGTGGTGTGCAATGCAGT+TGG | + | chr4.3:19121535-19121554 | MS.gene023131:intron | 45.0% | |
| TGTGTGTGCCAAGGAATAAG+GGG | + | chr4.3:19121065-19121084 | MS.gene023131:intron | 45.0% | |
| TTCCTACAGACCTCACTCAA+GGG | - | chr4.3:19120734-19120753 | None:intergenic | 45.0% | |
| TTTCATAATCGTTGGGGGAG+GGG | - | chr4.3:19120107-19120126 | None:intergenic | 45.0% | |
| ! | CTACAGGGCATTACTTAGAG+AGG | - | chr4.3:19120820-19120839 | None:intergenic | 45.0% |
| ! | GGTGATAATGAAAGGCGACA+AGG | + | chr4.3:19119690-19119709 | MS.gene023131:CDS | 45.0% |
| ! | GTCTGAAACCCCTTATTCCT+TGG | - | chr4.3:19121076-19121095 | None:intergenic | 45.0% |
| ! | TCATCTAGAATCGGTGCAAG+AGG | + | chr4.3:19120411-19120430 | MS.gene023131:intron | 45.0% |
| !! | ACAGGATGTTGGCTAGTCTT+CGG | - | chr4.3:19120607-19120626 | None:intergenic | 45.0% |
| !! | ATAGCGGTACTGACAGTATG+TGG | + | chr4.3:19121519-19121538 | MS.gene023131:intron | 45.0% |
| !! | GGTTATGATTTGGTCGTCCA+TGG | - | chr4.3:19120315-19120334 | None:intergenic | 45.0% |
| AAAGGCGACAAGGAGCTTGT+TGG | + | chr4.3:19119700-19119719 | MS.gene023131:CDS | 50.0% | |
| ACCTCACTCAAGGGGTAGAT+GGG | - | chr4.3:19120725-19120744 | None:intergenic | 50.0% | |
| CCATCACAGCTTCTTCCATC+AGG | + | chr4.3:19119538-19119557 | MS.gene023131:CDS | 50.0% | |
| CCTGATGGAAGAAGCTGTGA+TGG | - | chr4.3:19119541-19119560 | None:intergenic | 50.0% | |
| GAGCTGATTGACCGCTGTAT+AGG | + | chr4.3:19119655-19119674 | MS.gene023131:intron | 50.0% | |
| GCCCCAAAGTAACTACATGC+AGG | + | chr4.3:19120684-19120703 | MS.gene023131:intron | 50.0% | |
| GTCAGTACCGCTATGACACT+AGG | - | chr4.3:19121513-19121532 | None:intergenic | 50.0% | |
| GTTCCTACAGACCTCACTCA+AGG | - | chr4.3:19120735-19120754 | None:intergenic | 50.0% | |
| TCCTACAGACCTCACTCAAG+GGG | - | chr4.3:19120733-19120752 | None:intergenic | 50.0% | |
| TCCTGTACATGTGTGTGCCA+AGG | + | chr4.3:19121056-19121075 | MS.gene023131:intron | 50.0% | |
| TCCTTGGCACACACATGTAC+AGG | - | chr4.3:19121060-19121079 | None:intergenic | 50.0% | |
| TTCATAATCGTTGGGGGAGG+GGG | - | chr4.3:19120106-19120125 | None:intergenic | 50.0% | |
| TTCATGCGCACGCACACATA+TGG | + | chr4.3:19121242-19121261 | MS.gene023131:intron | 50.0% | |
| !! | CAGGATGTTGGCTAGTCTTC+GGG | - | chr4.3:19120606-19120625 | None:intergenic | 50.0% |
| !! | GAGCTTGTTGGTACCCTTAG+AGG | + | chr4.3:19119712-19119731 | MS.gene023131:CDS | 50.0% |
| ACAGCGAGATCACTGCTGAG+GGG | + | chr4.3:19121311-19121330 | MS.gene023131:intron | 55.0% | |
| ACCCATCTACCCCTTGAGTG+AGG | + | chr4.3:19120721-19120740 | MS.gene023131:intron | 55.0% | |
| ACCCCTTGAGTGAGGTCTGT+AGG | + | chr4.3:19120729-19120748 | MS.gene023131:intron | 55.0% | |
| AGATCACTGCTGAGGGGAGA+AGG | + | chr4.3:19121317-19121336 | MS.gene023131:CDS | 55.0% | |
| CTGGATCAGGTGAACCACCA+GGG | - | chr4.3:19121562-19121581 | None:intergenic | 55.0% | |
| GACAGCGAGATCACTGCTGA+GGG | + | chr4.3:19121310-19121329 | MS.gene023131:intron | 55.0% | |
| GACCTCACTCAAGGGGTAGA+TGG | - | chr4.3:19120726-19120745 | None:intergenic | 55.0% | |
| TCATAATCGTTGGGGGAGGG+GGG | - | chr4.3:19120105-19120124 | None:intergenic | 55.0% | |
| TCTGGATCAGGTGAACCACC+AGG | - | chr4.3:19121563-19121582 | None:intergenic | 55.0% | |
| TGTGCAATGCAGTTGGTCCC+TGG | + | chr4.3:19121542-19121561 | MS.gene023131:intron | 55.0% | |
| !! | GGCTAGTCTTCGGGCTATGA+AGG | - | chr4.3:19120597-19120616 | None:intergenic | 55.0% |
| CGACAGCGAGATCACTGCTG+AGG | + | chr4.3:19121309-19121328 | MS.gene023131:intron | 60.0% | |
| GCAATGCAGTTGGTCCCTGG+TGG | + | chr4.3:19121545-19121564 | MS.gene023131:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 19119526 | 19121586 | 19119526 | ID=MS.gene023131 |
| chr4.3 | mRNA | 19119526 | 19121586 | 19119526 | ID=MS.gene023131.t1;Parent=MS.gene023131 |
| chr4.3 | exon | 19119526 | 19119559 | 19119526 | ID=MS.gene023131.t1.exon1;Parent=MS.gene023131.t1 |
| chr4.3 | CDS | 19119526 | 19119559 | 19119526 | ID=cds.MS.gene023131.t1;Parent=MS.gene023131.t1 |
| chr4.3 | exon | 19119656 | 19119779 | 19119656 | ID=MS.gene023131.t1.exon2;Parent=MS.gene023131.t1 |
| chr4.3 | CDS | 19119656 | 19119779 | 19119656 | ID=cds.MS.gene023131.t1;Parent=MS.gene023131.t1 |
| chr4.3 | exon | 19121315 | 19121387 | 19121315 | ID=MS.gene023131.t1.exon3;Parent=MS.gene023131.t1 |
| chr4.3 | CDS | 19121315 | 19121387 | 19121315 | ID=cds.MS.gene023131.t1;Parent=MS.gene023131.t1 |
| chr4.3 | exon | 19121554 | 19121586 | 19121554 | ID=MS.gene023131.t1.exon4;Parent=MS.gene023131.t1 |
| chr4.3 | CDS | 19121554 | 19121586 | 19121554 | ID=cds.MS.gene023131.t1;Parent=MS.gene023131.t1 |
| Gene Sequence |
| Protein sequence |