Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36469.t1 | XP_004504703.1 | 100 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 5.20E-42 | 179.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36469.t1 | Q9FKB0 | 95.3 | 85 | 4 | 0 | 1 | 85 | 1 | 85 | 1.3e-41 | 169.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36469.t1 | A0A0B0NQ45 | 100.0 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 3.7e-42 | 179.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36469.t1 | MTR_4g094600 | 100.000 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 1.21e-59 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36469.t1 | AT5G48870 | 95.294 | 85 | 4 | 0 | 1 | 85 | 1 | 85 | 1.46e-55 | 166 |
Find 21 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAGCAGCATTGTTCATTC+TGG | 0.260713 | 4.1:-18555816 | None:intergenic |
| CATAAACATCAAAGCCTCTA+AGG | 0.282210 | 4.1:-18553959 | None:intergenic |
| GAGCTTGTTGGTACCCTTAG+AGG | 0.311837 | 4.1:+18553945 | MS.gene36469:CDS |
| CCATCACAGCTTCTTCCATC+AGG | 0.419048 | 4.1:+18553771 | MS.gene36469:CDS |
| ACTATTCAGTAACATCTTCA+AGG | 0.420043 | 4.1:-18553992 | None:intergenic |
| AGCATTGTTCATTCTGGATC+AGG | 0.435725 | 4.1:-18555810 | None:intergenic |
| GAGCTGATTGACCGCTGTAT+AGG | 0.443634 | 4.1:+18553888 | MS.gene36469:intron |
| CTTTGATGTTTATGTTAACA+TGG | 0.481181 | 4.1:+18553968 | MS.gene36469:CDS |
| TGTGCAATGCAGTTGGTCCC+TGG | 0.507142 | 4.1:+18555780 | MS.gene36469:intron |
| AGATCACTGCTGAGGGGAGA+AGG | 0.509229 | 4.1:+18555555 | MS.gene36469:CDS |
| AAAGGCGACAAGGAGCTTGT+TGG | 0.513402 | 4.1:+18553933 | MS.gene36469:CDS |
| AAAATATGGGTGATAATGAA+AGG | 0.540065 | 4.1:+18553915 | MS.gene36469:CDS |
| CCTGATGGAAGAAGCTGTGA+TGG | 0.541063 | 4.1:-18553771 | None:intergenic |
| ATAAACATCAAAGCCTCTAA+GGG | 0.563111 | 4.1:-18553958 | None:intergenic |
| TCTGGATCAGGTGAACCACC+AGG | 0.582965 | 4.1:-18555798 | None:intergenic |
| AACAGCGAGATCACTGCTGA+GGG | 0.596820 | 4.1:+18555548 | MS.gene36469:intron |
| CAACAGCGAGATCACTGCTG+AGG | 0.645210 | 4.1:+18555547 | MS.gene36469:intron |
| GGTGATAATGAAAGGCGACA+AGG | 0.648287 | 4.1:+18553923 | MS.gene36469:CDS |
| GCAATGCAGTTGGTCCCTGG+TGG | 0.679569 | 4.1:+18555783 | MS.gene36469:intron |
| CTGGATCAGGTGAACCACCA+GGG | 0.706934 | 4.1:-18555797 | None:intergenic |
| ACAGCGAGATCACTGCTGAG+GGG | 0.753357 | 4.1:+18555549 | MS.gene36469:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATACCATAGAATTT+AGG | - | chr4.1:18555662-18555681 | None:intergenic | 15.0% |
| !!! | AAATGCATTTTAAAAATTTG+AGG | - | chr4.1:18554206-18554225 | None:intergenic | 15.0% |
| !!! | AATGCATTTTAAAAATTTGA+GGG | - | chr4.1:18554205-18554224 | None:intergenic | 15.0% |
| !! | ACAAAAGTTCAAATTAAGAT+AGG | - | chr4.1:18554510-18554529 | None:intergenic | 20.0% |
| !! | ATAAACTAAATCAATTTGTG+AGG | - | chr4.1:18555511-18555530 | None:intergenic | 20.0% |
| !! | ATGTAAACATTCATAAAAGT+TGG | - | chr4.1:18554280-18554299 | None:intergenic | 20.0% |
| !! | TGTAAACATTCATAAAAGTT+GGG | - | chr4.1:18554279-18554298 | None:intergenic | 20.0% |
| !! | TTAAGATTTAAGAAAGTGAA+GGG | + | chr4.1:18554457-18554476 | MS.gene36469:intron | 20.0% |
| !! | TTCTATTTACCTAAATTCTA+TGG | + | chr4.1:18555650-18555669 | MS.gene36469:intron | 20.0% |
| !!! | TGTTTACATTTAATTTGAAC+TGG | + | chr4.1:18554291-18554310 | MS.gene36469:intron | 20.0% |
| !!! | TTTTAAAATGCATTTCTAAC+TGG | + | chr4.1:18554211-18554230 | MS.gene36469:intron | 20.0% |
| ! | AAAGAACATATTTGATGAGT+AGG | + | chr4.1:18554134-18554153 | MS.gene36469:intron | 25.0% |
| ! | AGACTTTCTTACCTTTATAA+TGG | + | chr4.1:18555405-18555424 | MS.gene36469:intron | 25.0% |
| ! | AGTTTAAAAGATGACAATGT+CGG | - | chr4.1:18555094-18555113 | None:intergenic | 25.0% |
| ! | ATTAACTTAGTACATGAAAG+AGG | - | chr4.1:18555245-18555264 | None:intergenic | 25.0% |
| ! | CTGTATAGGTTCAAAAATAT+GGG | + | chr4.1:18553902-18553921 | MS.gene36469:CDS | 25.0% |
| ! | CTTTGATGTTTATGTTAACA+TGG | + | chr4.1:18553968-18553987 | MS.gene36469:CDS | 25.0% |
| ! | GGGAAATGAAAGTAAATATA+TGG | - | chr4.1:18554681-18554700 | None:intergenic | 25.0% |
| ! | GTAAACATTCATAAAAGTTG+GGG | - | chr4.1:18554278-18554297 | None:intergenic | 25.0% |
| ! | GTTAAGATTTAAGAAAGTGA+AGG | + | chr4.1:18554456-18554475 | MS.gene36469:intron | 25.0% |
| ! | TATTAATGAATCATTTGACC+TGG | + | chr4.1:18555675-18555694 | MS.gene36469:intron | 25.0% |
| ! | TCTCAAATTTCTATGTTTCT+TGG | + | chr4.1:18555014-18555033 | MS.gene36469:intron | 25.0% |
| ! | TTGTTGGCACAAAAAAATAT+TGG | + | chr4.1:18554403-18554422 | MS.gene36469:intron | 25.0% |
| !! | AAAATATGGGTGATAATGAA+AGG | + | chr4.1:18553915-18553934 | MS.gene36469:CDS | 25.0% |
| !! | AATTTTTCCTTTATGCATTG+AGG | - | chr4.1:18554811-18554830 | None:intergenic | 25.0% |
| !! | ACCAACTATGTTTTTCTAAT+TGG | + | chr4.1:18555182-18555201 | MS.gene36469:intron | 25.0% |
| !! | AGTTTAGGTTTAGTTTATCA+TGG | + | chr4.1:18555148-18555167 | MS.gene36469:intron | 25.0% |
| !! | ATGGATAAAAGCATAAAATG+TGG | - | chr4.1:18554031-18554050 | None:intergenic | 25.0% |
| !! | CCAACTATGTTTTTCTAATT+GGG | + | chr4.1:18555183-18555202 | MS.gene36469:intron | 25.0% |
| !! | CTTGATCAAATTTTACTCAA+TGG | + | chr4.1:18555587-18555606 | MS.gene36469:CDS | 25.0% |
| !! | TGAGAATTTGAAACTTACAA+TGG | - | chr4.1:18555624-18555643 | None:intergenic | 25.0% |
| !!! | ATATTTTTGAACCTATACAG+CGG | - | chr4.1:18553902-18553921 | None:intergenic | 25.0% |
| !!! | GTTTGAAATTCAAGTTGTTT+GGG | + | chr4.1:18554425-18554444 | MS.gene36469:intron | 25.0% |
| AAACAGAGTTCAAGCAATAT+TGG | - | chr4.1:18553834-18553853 | None:intergenic | 30.0% | |
| AACAATCAGATATGCACAAT+AGG | - | chr4.1:18554107-18554126 | None:intergenic | 30.0% | |
| AACAGAGTTCAAGCAATATT+GGG | - | chr4.1:18553833-18553852 | None:intergenic | 30.0% | |
| AACATATTTGATGAGTAGGA+AGG | + | chr4.1:18554138-18554157 | MS.gene36469:intron | 30.0% | |
| ACTAGAAAAATGATTGGAGA+TGG | - | chr4.1:18553807-18553826 | None:intergenic | 30.0% | |
| ACTATTCAGTAACATCTTCA+AGG | - | chr4.1:18553995-18554014 | None:intergenic | 30.0% | |
| AGACACAAAAGCCATTATAA+AGG | - | chr4.1:18555419-18555438 | None:intergenic | 30.0% | |
| AGACACATGTTATTAAGTCT+AGG | + | chr4.1:18555120-18555139 | MS.gene36469:intron | 30.0% | |
| ATAAACATCAAAGCCTCTAA+GGG | - | chr4.1:18553961-18553980 | None:intergenic | 30.0% | |
| ATAACAATCAAGTGAAGTCA+AGG | - | chr4.1:18554619-18554638 | None:intergenic | 30.0% | |
| ATTCAACGATATTGACCATA+AGG | - | chr4.1:18554574-18554593 | None:intergenic | 30.0% | |
| CCCAATTAGAAAAACATAGT+TGG | - | chr4.1:18555186-18555205 | None:intergenic | 30.0% | |
| CGATTATGAAAGTAGGTAAT+TGG | + | chr4.1:18554354-18554373 | MS.gene36469:intron | 30.0% | |
| GCTGTATAGGTTCAAAAATA+TGG | + | chr4.1:18553901-18553920 | MS.gene36469:CDS | 30.0% | |
| GGGTTAACTAGAAAAATGAT+TGG | - | chr4.1:18553813-18553832 | None:intergenic | 30.0% | |
| TAAGTCTAGGTTAAGAGTTT+AGG | + | chr4.1:18555133-18555152 | MS.gene36469:intron | 30.0% | |
| TACCTACTTTCATAATCGTT+GGG | - | chr4.1:18554352-18554371 | None:intergenic | 30.0% | |
| TCAGCTAGTTAAGACTTAAA+AGG | + | chr4.1:18554895-18554914 | MS.gene36469:intron | 30.0% | |
| TTACCTACTTTCATAATCGT+TGG | - | chr4.1:18554353-18554372 | None:intergenic | 30.0% | |
| TTGACCATAAGGTTATGATT+TGG | - | chr4.1:18554563-18554582 | None:intergenic | 30.0% | |
| ! | ATTTTGTGGAGTTATCAACA+TGG | - | chr4.1:18554775-18554794 | None:intergenic | 30.0% |
| ! | CACTTGATTGTTATTAGCAA+GGG | + | chr4.1:18554625-18554644 | MS.gene36469:intron | 30.0% |
| ! | GATAAGTCATTCGAATTTTG+TGG | - | chr4.1:18554789-18554808 | None:intergenic | 30.0% |
| ! | TCACTTGATTGTTATTAGCA+AGG | + | chr4.1:18554624-18554643 | MS.gene36469:intron | 30.0% |
| ! | TTTACGTGTTTGTTACTCAA+GGG | + | chr4.1:18554176-18554195 | MS.gene36469:intron | 30.0% |
| ! | TTTTGTGGAGTTATCAACAT+GGG | - | chr4.1:18554774-18554793 | None:intergenic | 30.0% |
| !! | GGTTTGAAATTCAAGTTGTT+TGG | + | chr4.1:18554424-18554443 | MS.gene36469:intron | 30.0% |
| AACTGAAAGTTACAGGATGT+TGG | - | chr4.1:18554856-18554875 | None:intergenic | 35.0% | |
| AAGAGCTAACTGAAAGTTAC+AGG | - | chr4.1:18554863-18554882 | None:intergenic | 35.0% | |
| ACCTACTTTCATAATCGTTG+GGG | - | chr4.1:18554351-18554370 | None:intergenic | 35.0% | |
| ACGACCAAATCATAACCTTA+TGG | + | chr4.1:18554556-18554575 | MS.gene36469:intron | 35.0% | |
| AGGCTTTCTCATTTGGTTAT+TGG | - | chr4.1:18554702-18554721 | None:intergenic | 35.0% | |
| CAGAACATCAGTAAGTTCTA+TGG | - | chr4.1:18554050-18554069 | None:intergenic | 35.0% | |
| CATAAACATCAAAGCCTCTA+AGG | - | chr4.1:18553962-18553981 | None:intergenic | 35.0% | |
| GACTTATCCTCAATGCATAA+AGG | + | chr4.1:18554801-18554820 | MS.gene36469:intron | 35.0% | |
| GGAACTCATAATACTCTACA+GGG | - | chr4.1:18555073-18555092 | None:intergenic | 35.0% | |
| GGCTTTCTCATTTGGTTATT+GGG | - | chr4.1:18554701-18554720 | None:intergenic | 35.0% | |
| GTAATTGGTCACTGGTAAAT+GGG | + | chr4.1:18554369-18554388 | MS.gene36469:intron | 35.0% | |
| GTTGTTCATTCTCCTTGATT+TGG | + | chr4.1:18555454-18555473 | MS.gene36469:intron | 35.0% | |
| TCAAGTGAAGTCAAGGATAA+TGG | - | chr4.1:18554612-18554631 | None:intergenic | 35.0% | |
| TCTTGGAGCTATATAGCTAA+GGG | + | chr4.1:18555031-18555050 | MS.gene36469:intron | 35.0% | |
| TCTTTCTCAGTGGATATTTC+TGG | + | chr4.1:18555362-18555381 | MS.gene36469:intron | 35.0% | |
| TTCTTGGAGCTATATAGCTA+AGG | + | chr4.1:18555030-18555049 | MS.gene36469:intron | 35.0% | |
| ! | AGTTTTTCCTAGTGTCATAG+CGG | + | chr4.1:18555741-18555760 | MS.gene36469:intron | 35.0% |
| ! | CTTTACGTGTTTGTTACTCA+AGG | + | chr4.1:18554175-18554194 | MS.gene36469:intron | 35.0% |
| !! | AGTACATGAAAGAGGCATTA+TGG | - | chr4.1:18555237-18555256 | None:intergenic | 35.0% |
| !!! | ATGGGTGTTTTTGGATTTGT+TGG | + | chr4.1:18554387-18554406 | MS.gene36469:intron | 35.0% |
| !!! | TTTTAGAGCATCTTTCTCAG+TGG | + | chr4.1:18555352-18555371 | MS.gene36469:intron | 35.0% |
| ACACACATGTACAGGATTAG+GGG | - | chr4.1:18555290-18555309 | None:intergenic | 40.0% | |
| AGACCTGCATGTAGTTACTT+TGG | - | chr4.1:18554928-18554947 | None:intergenic | 40.0% | |
| AGACTCCTTTAGCATGCATA+GGG | - | chr4.1:18554997-18555016 | None:intergenic | 40.0% | |
| AGAGATTTGCGATGAATGAG+AGG | - | chr4.1:18554722-18554741 | None:intergenic | 40.0% | |
| ATGTGTGTGCCAAGGAATAA+GGG | + | chr4.1:18555302-18555321 | MS.gene36469:intron | 40.0% | |
| ATTTGGTCGTCCATGGTTAA+TGG | - | chr4.1:18554546-18554565 | None:intergenic | 40.0% | |
| CACACACATGTACAGGATTA+GGG | - | chr4.1:18555291-18555310 | None:intergenic | 40.0% | |
| CCTACTTTCATAATCGTTGG+GGG | - | chr4.1:18554350-18554369 | None:intergenic | 40.0% | |
| CGGAACTCATAATACTCTAC+AGG | - | chr4.1:18555074-18555093 | None:intergenic | 40.0% | |
| CTACGAACAACCATTAACCA+TGG | + | chr4.1:18554533-18554552 | MS.gene36469:intron | 40.0% | |
| GAAAGTAGGTAATTGGTCAC+TGG | + | chr4.1:18554361-18554380 | MS.gene36469:intron | 40.0% | |
| GAATGAGAGGCTTTCTCATT+TGG | - | chr4.1:18554709-18554728 | None:intergenic | 40.0% | |
| GAGTAACAAACACGTAAAGC+TGG | - | chr4.1:18554174-18554193 | None:intergenic | 40.0% | |
| GATGGTGAAATCAAACCTGA+TGG | - | chr4.1:18553789-18553808 | None:intergenic | 40.0% | |
| GGGTACTTTCATATTTGCAG+AGG | - | chr4.1:18554754-18554773 | None:intergenic | 40.0% | |
| GGTAATTGGTCACTGGTAAA+TGG | + | chr4.1:18554368-18554387 | MS.gene36469:intron | 40.0% | |
| ! | ACCTGCATGTAGTTACTTTG+GGG | - | chr4.1:18554926-18554945 | None:intergenic | 40.0% |
| ! | AGCAAGGGTTCATCTAGAAT+CGG | + | chr4.1:18554640-18554659 | MS.gene36469:intron | 40.0% |
| ! | CAACATTTTGCAAAGTTGCC+AGG | - | chr4.1:18555696-18555715 | None:intergenic | 40.0% |
| ! | CACTGGTAAATGGGTGTTTT+TGG | + | chr4.1:18554378-18554397 | MS.gene36469:intron | 40.0% |
| ! | GACCTGCATGTAGTTACTTT+GGG | - | chr4.1:18554927-18554946 | None:intergenic | 40.0% |
| ! | TACAGGGCATTACTTAGAGA+GGG | - | chr4.1:18555057-18555076 | None:intergenic | 40.0% |
| ACTTTCATAATCGTTGGGGG+AGG | - | chr4.1:18554347-18554366 | None:intergenic | 45.0% | |
| CACACATGTACAGGATTAGG+GGG | - | chr4.1:18555289-18555308 | None:intergenic | 45.0% | |
| CATGTGTGTGCCAAGGAATA+AGG | + | chr4.1:18555301-18555320 | MS.gene36469:intron | 45.0% | |
| CCCCCAACGATTATGAAAGT+AGG | + | chr4.1:18554347-18554366 | MS.gene36469:intron | 45.0% | |
| CTTTCATAATCGTTGGGGGA+GGG | - | chr4.1:18554346-18554365 | None:intergenic | 45.0% | |
| GAACTCCCTATGCATGCTAA+AGG | + | chr4.1:18554989-18555008 | MS.gene36469:intron | 45.0% | |
| GAGACTCCTTTAGCATGCAT+AGG | - | chr4.1:18554998-18555017 | None:intergenic | 45.0% | |
| GCACACACATGTACAGGATT+AGG | - | chr4.1:18555292-18555311 | None:intergenic | 45.0% | |
| GCGCATGAACATCCAAATCA+AGG | - | chr4.1:18555469-18555488 | None:intergenic | 45.0% | |
| TATGTGGTGTGCAATGCAGT+TGG | + | chr4.1:18555773-18555792 | MS.gene36469:intron | 45.0% | |
| TGTGTGTGCCAAGGAATAAG+GGG | + | chr4.1:18555303-18555322 | MS.gene36469:intron | 45.0% | |
| TTCCTACAGACCTCACTCAA+GGG | - | chr4.1:18554972-18554991 | None:intergenic | 45.0% | |
| TTTCATAATCGTTGGGGGAG+GGG | - | chr4.1:18554345-18554364 | None:intergenic | 45.0% | |
| ! | CTACAGGGCATTACTTAGAG+AGG | - | chr4.1:18555058-18555077 | None:intergenic | 45.0% |
| ! | GGTGATAATGAAAGGCGACA+AGG | + | chr4.1:18553923-18553942 | MS.gene36469:CDS | 45.0% |
| ! | GTCTGAAACCCCTTATTCCT+TGG | - | chr4.1:18555314-18555333 | None:intergenic | 45.0% |
| ! | TCATCTAGAATCGGTGCAAG+AGG | + | chr4.1:18554649-18554668 | MS.gene36469:intron | 45.0% |
| !! | ACAGGATGTTGGCTAGTCTT+CGG | - | chr4.1:18554845-18554864 | None:intergenic | 45.0% |
| !! | ATAGCGGTACTGACAGTATG+TGG | + | chr4.1:18555757-18555776 | MS.gene36469:intron | 45.0% |
| !! | GGTTATGATTTGGTCGTCCA+TGG | - | chr4.1:18554553-18554572 | None:intergenic | 45.0% |
| AAAGGCGACAAGGAGCTTGT+TGG | + | chr4.1:18553933-18553952 | MS.gene36469:CDS | 50.0% | |
| AACAGCGAGATCACTGCTGA+GGG | + | chr4.1:18555548-18555567 | MS.gene36469:intron | 50.0% | |
| ACCTCACTCAAGGGGTAGAT+GGG | - | chr4.1:18554963-18554982 | None:intergenic | 50.0% | |
| CCATCACAGCTTCTTCCATC+AGG | + | chr4.1:18553771-18553790 | MS.gene36469:CDS | 50.0% | |
| CCTGATGGAAGAAGCTGTGA+TGG | - | chr4.1:18553774-18553793 | None:intergenic | 50.0% | |
| GAGCTGATTGACCGCTGTAT+AGG | + | chr4.1:18553888-18553907 | MS.gene36469:intron | 50.0% | |
| GCCCCAAAGTAACTACATGC+AGG | + | chr4.1:18554922-18554941 | MS.gene36469:intron | 50.0% | |
| GTCAGTACCGCTATGACACT+AGG | - | chr4.1:18555751-18555770 | None:intergenic | 50.0% | |
| GTTCCTACAGACCTCACTCA+AGG | - | chr4.1:18554973-18554992 | None:intergenic | 50.0% | |
| TCCTACAGACCTCACTCAAG+GGG | - | chr4.1:18554971-18554990 | None:intergenic | 50.0% | |
| TCCTGTACATGTGTGTGCCA+AGG | + | chr4.1:18555294-18555313 | MS.gene36469:intron | 50.0% | |
| TCCTTGGCACACACATGTAC+AGG | - | chr4.1:18555298-18555317 | None:intergenic | 50.0% | |
| TTCATAATCGTTGGGGGAGG+GGG | - | chr4.1:18554344-18554363 | None:intergenic | 50.0% | |
| TTCATGCGCACGCACACATA+TGG | + | chr4.1:18555480-18555499 | MS.gene36469:intron | 50.0% | |
| !! | CAGGATGTTGGCTAGTCTTC+GGG | - | chr4.1:18554844-18554863 | None:intergenic | 50.0% |
| !! | GAGCTTGTTGGTACCCTTAG+AGG | + | chr4.1:18553945-18553964 | MS.gene36469:CDS | 50.0% |
| ACAGCGAGATCACTGCTGAG+GGG | + | chr4.1:18555549-18555568 | MS.gene36469:intron | 55.0% | |
| ACCCATCTACCCCTTGAGTG+AGG | + | chr4.1:18554959-18554978 | MS.gene36469:intron | 55.0% | |
| ACCCCTTGAGTGAGGTCTGT+AGG | + | chr4.1:18554967-18554986 | MS.gene36469:intron | 55.0% | |
| AGATCACTGCTGAGGGGAGA+AGG | + | chr4.1:18555555-18555574 | MS.gene36469:CDS | 55.0% | |
| CAACAGCGAGATCACTGCTG+AGG | + | chr4.1:18555547-18555566 | MS.gene36469:intron | 55.0% | |
| CTGGATCAGGTGAACCACCA+GGG | - | chr4.1:18555800-18555819 | None:intergenic | 55.0% | |
| GACCTCACTCAAGGGGTAGA+TGG | - | chr4.1:18554964-18554983 | None:intergenic | 55.0% | |
| TCATAATCGTTGGGGGAGGG+GGG | - | chr4.1:18554343-18554362 | None:intergenic | 55.0% | |
| TCTGGATCAGGTGAACCACC+AGG | - | chr4.1:18555801-18555820 | None:intergenic | 55.0% | |
| TGTGCAATGCAGTTGGTCCC+TGG | + | chr4.1:18555780-18555799 | MS.gene36469:intron | 55.0% | |
| !! | GGCTAGTCTTCGGGCTATGA+AGG | - | chr4.1:18554835-18554854 | None:intergenic | 55.0% |
| GCAATGCAGTTGGTCCCTGG+TGG | + | chr4.1:18555783-18555802 | MS.gene36469:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 18553759 | 18555824 | 18553759 | ID=MS.gene36469 |
| chr4.1 | mRNA | 18553759 | 18555824 | 18553759 | ID=MS.gene36469.t1;Parent=MS.gene36469 |
| chr4.1 | exon | 18553759 | 18553792 | 18553759 | ID=MS.gene36469.t1.exon1;Parent=MS.gene36469.t1 |
| chr4.1 | CDS | 18553759 | 18553792 | 18553759 | ID=cds.MS.gene36469.t1;Parent=MS.gene36469.t1 |
| chr4.1 | exon | 18553889 | 18554012 | 18553889 | ID=MS.gene36469.t1.exon2;Parent=MS.gene36469.t1 |
| chr4.1 | CDS | 18553889 | 18554012 | 18553889 | ID=cds.MS.gene36469.t1;Parent=MS.gene36469.t1 |
| chr4.1 | exon | 18555553 | 18555625 | 18555553 | ID=MS.gene36469.t1.exon3;Parent=MS.gene36469.t1 |
| chr4.1 | CDS | 18555553 | 18555625 | 18555553 | ID=cds.MS.gene36469.t1;Parent=MS.gene36469.t1 |
| chr4.1 | exon | 18555792 | 18555824 | 18555792 | ID=MS.gene36469.t1.exon4;Parent=MS.gene36469.t1 |
| chr4.1 | CDS | 18555792 | 18555824 | 18555792 | ID=cds.MS.gene36469.t1;Parent=MS.gene36469.t1 |
| Gene Sequence |
| Protein sequence |