Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028322.t1 | XP_004504703.1 | 100 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 5.20E-42 | 179.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028322.t1 | Q9FKB0 | 95.3 | 85 | 4 | 0 | 1 | 85 | 1 | 85 | 1.3e-41 | 169.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028322.t1 | A0A0B0NQ45 | 100.0 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 3.7e-42 | 179.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028322.t1 | MTR_4g094600 | 100.000 | 87 | 0 | 0 | 1 | 87 | 1 | 87 | 1.21e-59 | 177 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028322.t1 | AT5G48870 | 95.294 | 85 | 4 | 0 | 1 | 85 | 1 | 85 | 1.46e-55 | 166 |
Find 21 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAGCAGCATTGTTCATTC+TGG | 0.260713 | 4.2:-17673602 | None:intergenic |
CATAAACATCAAAGCCTCTA+AGG | 0.282210 | 4.2:-17671753 | None:intergenic |
GAGCTTGTTGGTACCCTTAG+AGG | 0.311837 | 4.2:+17671739 | MS.gene028322:CDS |
CCATCACAGCTTCTTCCATC+AGG | 0.419048 | 4.2:+17671565 | MS.gene028322:CDS |
ACTATTCAGTAACATCTTCA+AGG | 0.420043 | 4.2:-17671786 | None:intergenic |
AGCATTGTTCATTCTGGATC+AGG | 0.435725 | 4.2:-17673596 | None:intergenic |
GAGCTGATTGACCGCTGTAT+AGG | 0.443634 | 4.2:+17671682 | MS.gene028322:intron |
CTTTGATGTTTATGTTAACA+TGG | 0.481181 | 4.2:+17671762 | MS.gene028322:CDS |
TGTGCAATGCAGTTGGTCCC+TGG | 0.507142 | 4.2:+17673566 | MS.gene028322:intron |
AGATCACTGCTGAGGGGAGA+AGG | 0.509229 | 4.2:+17673341 | MS.gene028322:CDS |
AAAGGCGACAAGGAGCTTGT+TGG | 0.513402 | 4.2:+17671727 | MS.gene028322:CDS |
AAAATATGGGTGATAATGAA+AGG | 0.540065 | 4.2:+17671709 | MS.gene028322:CDS |
CCTGATGGAAGAAGCTGTGA+TGG | 0.541063 | 4.2:-17671565 | None:intergenic |
ATAAACATCAAAGCCTCTAA+GGG | 0.563111 | 4.2:-17671752 | None:intergenic |
TCTGGATCAGGTGAACCACC+AGG | 0.582965 | 4.2:-17673584 | None:intergenic |
AACAGCGAGATCACTGCTGA+GGG | 0.596820 | 4.2:+17673334 | MS.gene028322:intron |
CAACAGCGAGATCACTGCTG+AGG | 0.645210 | 4.2:+17673333 | MS.gene028322:intron |
GGTGATAATGAAAGGCGACA+AGG | 0.648287 | 4.2:+17671717 | MS.gene028322:CDS |
GCAATGCAGTTGGTCCCTGG+TGG | 0.679569 | 4.2:+17673569 | MS.gene028322:intron |
CTGGATCAGGTGAACCACCA+GGG | 0.706934 | 4.2:-17673583 | None:intergenic |
ACAGCGAGATCACTGCTGAG+GGG | 0.753357 | 4.2:+17673335 | MS.gene028322:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATATACCATAGAATTT+AGG | - | chr4.2:17673448-17673467 | None:intergenic | 15.0% |
!!! | AAATGCATTTTAAAAATTTG+AGG | - | chr4.2:17671992-17672011 | None:intergenic | 15.0% |
!!! | AATGCATTTTAAAAATTTGA+GGG | - | chr4.2:17671991-17672010 | None:intergenic | 15.0% |
!! | ACAAAAGTTCAAATTAAGAT+AGG | - | chr4.2:17672296-17672315 | None:intergenic | 20.0% |
!! | ATAAACTAAATCAATTTGTG+AGG | - | chr4.2:17673297-17673316 | None:intergenic | 20.0% |
!! | ATGTAAACATTCATAAAAGT+TGG | - | chr4.2:17672066-17672085 | None:intergenic | 20.0% |
!! | TATTAATAAATCATTTGACC+TGG | + | chr4.2:17673461-17673480 | MS.gene028322:intron | 20.0% |
!! | TGTAAACATTCATAAAAGTT+GGG | - | chr4.2:17672065-17672084 | None:intergenic | 20.0% |
!! | TTAAGATTTAAGAAAGTGAA+GGG | + | chr4.2:17672243-17672262 | MS.gene028322:intron | 20.0% |
!! | TTCTATTTACCTAAATTCTA+TGG | + | chr4.2:17673436-17673455 | MS.gene028322:intron | 20.0% |
!!! | TGTTTACATTTAATTTGAAC+TGG | + | chr4.2:17672077-17672096 | MS.gene028322:intron | 20.0% |
!!! | TTTTAAAATGCATTTCTAAC+TGG | + | chr4.2:17671997-17672016 | MS.gene028322:intron | 20.0% |
! | AAAGAACATATTTGATGAGT+AGG | + | chr4.2:17671920-17671939 | MS.gene028322:intron | 25.0% |
! | AGACTTTCTTACCTTTATAA+TGG | + | chr4.2:17673191-17673210 | MS.gene028322:intron | 25.0% |
! | AGTTTAAAAGATGACAATGT+CGG | - | chr4.2:17672880-17672899 | None:intergenic | 25.0% |
! | ATTAACTTAGTACATGAAAG+AGG | - | chr4.2:17673031-17673050 | None:intergenic | 25.0% |
! | CTGTATAGGTTCAAAAATAT+GGG | + | chr4.2:17671696-17671715 | MS.gene028322:CDS | 25.0% |
! | CTTTGATGTTTATGTTAACA+TGG | + | chr4.2:17671762-17671781 | MS.gene028322:CDS | 25.0% |
! | GGGAAATGAAAGTAAATATA+TGG | - | chr4.2:17672467-17672486 | None:intergenic | 25.0% |
! | GTAAACATTCATAAAAGTTG+GGG | - | chr4.2:17672064-17672083 | None:intergenic | 25.0% |
! | GTTAAGATTTAAGAAAGTGA+AGG | + | chr4.2:17672242-17672261 | MS.gene028322:intron | 25.0% |
! | TCTCAAATTTCTATGTTTCT+TGG | + | chr4.2:17672800-17672819 | MS.gene028322:intron | 25.0% |
! | TTGTTGGCACAAAAAAATAT+TGG | + | chr4.2:17672189-17672208 | MS.gene028322:intron | 25.0% |
!! | AAAATATGGGTGATAATGAA+AGG | + | chr4.2:17671709-17671728 | MS.gene028322:CDS | 25.0% |
!! | AATTTTTCCTTTATGCATTG+AGG | - | chr4.2:17672597-17672616 | None:intergenic | 25.0% |
!! | ACCAACTATGTTTTTCTAAT+TGG | + | chr4.2:17672968-17672987 | MS.gene028322:intron | 25.0% |
!! | AGTTTAGGTTTAGTTTATCA+TGG | + | chr4.2:17672934-17672953 | MS.gene028322:intron | 25.0% |
!! | ATGGATAAAAGCATAAAATG+TGG | - | chr4.2:17671825-17671844 | None:intergenic | 25.0% |
!! | CCAACTATGTTTTTCTAATT+GGG | + | chr4.2:17672969-17672988 | MS.gene028322:intron | 25.0% |
!! | CTTGATCAAATTTTACTCAA+TGG | + | chr4.2:17673373-17673392 | MS.gene028322:CDS | 25.0% |
!! | TGAGAATTTGAAACTTACAA+TGG | - | chr4.2:17673410-17673429 | None:intergenic | 25.0% |
!!! | ATATTTTTGAACCTATACAG+CGG | - | chr4.2:17671696-17671715 | None:intergenic | 25.0% |
!!! | GTTTGAAATTCAAGTTGTTT+GGG | + | chr4.2:17672211-17672230 | MS.gene028322:intron | 25.0% |
AAACAGAGTTCAAGCAATAT+TGG | - | chr4.2:17671628-17671647 | None:intergenic | 30.0% | |
AACAATCAGATATGCACAAT+AGG | - | chr4.2:17671893-17671912 | None:intergenic | 30.0% | |
AACAGAGTTCAAGCAATATT+GGG | - | chr4.2:17671627-17671646 | None:intergenic | 30.0% | |
AACATATTTGATGAGTAGGA+AGG | + | chr4.2:17671924-17671943 | MS.gene028322:intron | 30.0% | |
ACTAGAAAAATGATTGGAGA+TGG | - | chr4.2:17671601-17671620 | None:intergenic | 30.0% | |
ACTATTCAGTAACATCTTCA+AGG | - | chr4.2:17671789-17671808 | None:intergenic | 30.0% | |
AGACACAAAAGCCATTATAA+AGG | - | chr4.2:17673205-17673224 | None:intergenic | 30.0% | |
AGACACATGTTATTAAGTCT+AGG | + | chr4.2:17672906-17672925 | MS.gene028322:intron | 30.0% | |
ATAAACATCAAAGCCTCTAA+GGG | - | chr4.2:17671755-17671774 | None:intergenic | 30.0% | |
ATAACAATCAAGTGAAGTCA+AGG | - | chr4.2:17672405-17672424 | None:intergenic | 30.0% | |
ATTCAACGATATTGACCATA+AGG | - | chr4.2:17672360-17672379 | None:intergenic | 30.0% | |
CCCAATTAGAAAAACATAGT+TGG | - | chr4.2:17672972-17672991 | None:intergenic | 30.0% | |
CGATTATGAAAGTAGGTAAT+TGG | + | chr4.2:17672140-17672159 | MS.gene028322:intron | 30.0% | |
GCTGTATAGGTTCAAAAATA+TGG | + | chr4.2:17671695-17671714 | MS.gene028322:CDS | 30.0% | |
GGGTTAACTAGAAAAATGAT+TGG | - | chr4.2:17671607-17671626 | None:intergenic | 30.0% | |
TAAGTCTAGGTTAAGAGTTT+AGG | + | chr4.2:17672919-17672938 | MS.gene028322:intron | 30.0% | |
TACCTACTTTCATAATCGTT+GGG | - | chr4.2:17672138-17672157 | None:intergenic | 30.0% | |
TCAGCTAGTTAAGACTTAAA+AGG | + | chr4.2:17672681-17672700 | MS.gene028322:intron | 30.0% | |
TTACCTACTTTCATAATCGT+TGG | - | chr4.2:17672139-17672158 | None:intergenic | 30.0% | |
TTGACCATAAGGTTATGATT+TGG | - | chr4.2:17672349-17672368 | None:intergenic | 30.0% | |
! | ATTTTGTGGAGTTATCAACA+TGG | - | chr4.2:17672561-17672580 | None:intergenic | 30.0% |
! | CACTTGATTGTTATTAGCAA+GGG | + | chr4.2:17672411-17672430 | MS.gene028322:intron | 30.0% |
! | GATAAGTCATTCGAATTTTG+TGG | - | chr4.2:17672575-17672594 | None:intergenic | 30.0% |
! | TCACTTGATTGTTATTAGCA+AGG | + | chr4.2:17672410-17672429 | MS.gene028322:intron | 30.0% |
! | TTTACGTGTTTGTTACTCAA+GGG | + | chr4.2:17671962-17671981 | MS.gene028322:intron | 30.0% |
! | TTTTGTGGAGTTATCAACAT+GGG | - | chr4.2:17672560-17672579 | None:intergenic | 30.0% |
!! | GGTTTGAAATTCAAGTTGTT+TGG | + | chr4.2:17672210-17672229 | MS.gene028322:intron | 30.0% |
AACTGAAAGTTACAGGATGT+TGG | - | chr4.2:17672642-17672661 | None:intergenic | 35.0% | |
AAGAGCTAACTGAAAGTTAC+AGG | - | chr4.2:17672649-17672668 | None:intergenic | 35.0% | |
ACCTACTTTCATAATCGTTG+GGG | - | chr4.2:17672137-17672156 | None:intergenic | 35.0% | |
ACGACCAAATCATAACCTTA+TGG | + | chr4.2:17672342-17672361 | MS.gene028322:intron | 35.0% | |
AGGCTTTCTCATTTGGTTAT+TGG | - | chr4.2:17672488-17672507 | None:intergenic | 35.0% | |
CAGAACATCAGTAAGTTCTA+TGG | - | chr4.2:17671844-17671863 | None:intergenic | 35.0% | |
CATAAACATCAAAGCCTCTA+AGG | - | chr4.2:17671756-17671775 | None:intergenic | 35.0% | |
GACTTATCCTCAATGCATAA+AGG | + | chr4.2:17672587-17672606 | MS.gene028322:intron | 35.0% | |
GGAACTCATAATACTCTACA+GGG | - | chr4.2:17672859-17672878 | None:intergenic | 35.0% | |
GGCTTTCTCATTTGGTTATT+GGG | - | chr4.2:17672487-17672506 | None:intergenic | 35.0% | |
GTAATTGGTCACTGGTAAAT+GGG | + | chr4.2:17672155-17672174 | MS.gene028322:intron | 35.0% | |
GTTGTTCATTCTCCTTGATT+TGG | + | chr4.2:17673240-17673259 | MS.gene028322:intron | 35.0% | |
TCAAGTGAAGTCAAGGATAA+TGG | - | chr4.2:17672398-17672417 | None:intergenic | 35.0% | |
TCTTGGAGCTATATAGCTAA+GGG | + | chr4.2:17672817-17672836 | MS.gene028322:intron | 35.0% | |
TCTTTCTCAGTGGATATTTC+TGG | + | chr4.2:17673148-17673167 | MS.gene028322:intron | 35.0% | |
TTCTTGGAGCTATATAGCTA+AGG | + | chr4.2:17672816-17672835 | MS.gene028322:intron | 35.0% | |
! | AGTTTTTCCTAGTGTCATAG+CGG | + | chr4.2:17673527-17673546 | MS.gene028322:intron | 35.0% |
! | CTTTACGTGTTTGTTACTCA+AGG | + | chr4.2:17671961-17671980 | MS.gene028322:intron | 35.0% |
!! | AGTACATGAAAGAGGCATTA+TGG | - | chr4.2:17673023-17673042 | None:intergenic | 35.0% |
!!! | ATGGGTGTTTTTGGATTTGT+TGG | + | chr4.2:17672173-17672192 | MS.gene028322:intron | 35.0% |
!!! | TTTTAGAGCATCTTTCTCAG+TGG | + | chr4.2:17673138-17673157 | MS.gene028322:intron | 35.0% |
ACACACATGTACAGGATTAG+GGG | - | chr4.2:17673076-17673095 | None:intergenic | 40.0% | |
AGACCTGCATGTAGTTACTT+TGG | - | chr4.2:17672714-17672733 | None:intergenic | 40.0% | |
AGACTCCTTTAGCATGCATA+GGG | - | chr4.2:17672783-17672802 | None:intergenic | 40.0% | |
AGAGATTTGCGATGAATGAG+AGG | - | chr4.2:17672508-17672527 | None:intergenic | 40.0% | |
ATGTGTGTGCCAAGGAATAA+GGG | + | chr4.2:17673088-17673107 | MS.gene028322:intron | 40.0% | |
ATTTGGTCGTCCATGGTTAA+TGG | - | chr4.2:17672332-17672351 | None:intergenic | 40.0% | |
CACACACATGTACAGGATTA+GGG | - | chr4.2:17673077-17673096 | None:intergenic | 40.0% | |
CCTACTTTCATAATCGTTGG+GGG | - | chr4.2:17672136-17672155 | None:intergenic | 40.0% | |
CGGAACTCATAATACTCTAC+AGG | - | chr4.2:17672860-17672879 | None:intergenic | 40.0% | |
CTACGAACAACCATTAACCA+TGG | + | chr4.2:17672319-17672338 | MS.gene028322:intron | 40.0% | |
GAAAGTAGGTAATTGGTCAC+TGG | + | chr4.2:17672147-17672166 | MS.gene028322:intron | 40.0% | |
GAATGAGAGGCTTTCTCATT+TGG | - | chr4.2:17672495-17672514 | None:intergenic | 40.0% | |
GAGTAACAAACACGTAAAGC+TGG | - | chr4.2:17671960-17671979 | None:intergenic | 40.0% | |
GATGGTGAAATCAAACCTGA+TGG | - | chr4.2:17671583-17671602 | None:intergenic | 40.0% | |
GGGTACTTTCATATTTGCAG+AGG | - | chr4.2:17672540-17672559 | None:intergenic | 40.0% | |
GGTAATTGGTCACTGGTAAA+TGG | + | chr4.2:17672154-17672173 | MS.gene028322:intron | 40.0% | |
! | ACCTGCATGTAGTTACTTTG+GGG | - | chr4.2:17672712-17672731 | None:intergenic | 40.0% |
! | CAACATTTTGCAAAGTTGCC+AGG | - | chr4.2:17673482-17673501 | None:intergenic | 40.0% |
! | CACTGGTAAATGGGTGTTTT+TGG | + | chr4.2:17672164-17672183 | MS.gene028322:intron | 40.0% |
! | GACCTGCATGTAGTTACTTT+GGG | - | chr4.2:17672713-17672732 | None:intergenic | 40.0% |
! | TACAGGGCATTACTTAGAGA+GGG | - | chr4.2:17672843-17672862 | None:intergenic | 40.0% |
ACTTTCATAATCGTTGGGGG+AGG | - | chr4.2:17672133-17672152 | None:intergenic | 45.0% | |
CACACATGTACAGGATTAGG+GGG | - | chr4.2:17673075-17673094 | None:intergenic | 45.0% | |
CATGTGTGTGCCAAGGAATA+AGG | + | chr4.2:17673087-17673106 | MS.gene028322:intron | 45.0% | |
CCCCCAACGATTATGAAAGT+AGG | + | chr4.2:17672133-17672152 | MS.gene028322:intron | 45.0% | |
CTTTCATAATCGTTGGGGGA+GGG | - | chr4.2:17672132-17672151 | None:intergenic | 45.0% | |
GAACTCCCTATGCATGCTAA+AGG | + | chr4.2:17672775-17672794 | MS.gene028322:intron | 45.0% | |
GAGACTCCTTTAGCATGCAT+AGG | - | chr4.2:17672784-17672803 | None:intergenic | 45.0% | |
GCACACACATGTACAGGATT+AGG | - | chr4.2:17673078-17673097 | None:intergenic | 45.0% | |
GCGCATGAACATCCAAATCA+AGG | - | chr4.2:17673255-17673274 | None:intergenic | 45.0% | |
TATGTGGTGTGCAATGCAGT+TGG | + | chr4.2:17673559-17673578 | MS.gene028322:intron | 45.0% | |
TGTGTGTGCCAAGGAATAAG+GGG | + | chr4.2:17673089-17673108 | MS.gene028322:intron | 45.0% | |
TTCCTACAGACCTCACTCAA+GGG | - | chr4.2:17672758-17672777 | None:intergenic | 45.0% | |
TTTCATAATCGTTGGGGGAG+GGG | - | chr4.2:17672131-17672150 | None:intergenic | 45.0% | |
! | AGCAAGGGTTCGTCTAGAAT+CGG | + | chr4.2:17672426-17672445 | MS.gene028322:intron | 45.0% |
! | CTACAGGGCATTACTTAGAG+AGG | - | chr4.2:17672844-17672863 | None:intergenic | 45.0% |
! | GGTGATAATGAAAGGCGACA+AGG | + | chr4.2:17671717-17671736 | MS.gene028322:CDS | 45.0% |
! | GTCTGAAACCCCTTATTCCT+TGG | - | chr4.2:17673100-17673119 | None:intergenic | 45.0% |
!! | ACAGGATGTTGGCTAGTCTT+CGG | - | chr4.2:17672631-17672650 | None:intergenic | 45.0% |
!! | ATAGCGGTACTGACAGTATG+TGG | + | chr4.2:17673543-17673562 | MS.gene028322:intron | 45.0% |
!! | GGTTATGATTTGGTCGTCCA+TGG | - | chr4.2:17672339-17672358 | None:intergenic | 45.0% |
AAAGGCGACAAGGAGCTTGT+TGG | + | chr4.2:17671727-17671746 | MS.gene028322:CDS | 50.0% | |
AACAGCGAGATCACTGCTGA+GGG | + | chr4.2:17673334-17673353 | MS.gene028322:intron | 50.0% | |
ACCTCACTCAAGGGGTAGAT+GGG | - | chr4.2:17672749-17672768 | None:intergenic | 50.0% | |
CCATCACAGCTTCTTCCATC+AGG | + | chr4.2:17671565-17671584 | MS.gene028322:CDS | 50.0% | |
CCTGATGGAAGAAGCTGTGA+TGG | - | chr4.2:17671568-17671587 | None:intergenic | 50.0% | |
GAGCTGATTGACCGCTGTAT+AGG | + | chr4.2:17671682-17671701 | MS.gene028322:intron | 50.0% | |
GCCCCAAAGTAACTACATGC+AGG | + | chr4.2:17672708-17672727 | MS.gene028322:intron | 50.0% | |
GTCAGTACCGCTATGACACT+AGG | - | chr4.2:17673537-17673556 | None:intergenic | 50.0% | |
GTTCCTACAGACCTCACTCA+AGG | - | chr4.2:17672759-17672778 | None:intergenic | 50.0% | |
TCCTACAGACCTCACTCAAG+GGG | - | chr4.2:17672757-17672776 | None:intergenic | 50.0% | |
TCCTGTACATGTGTGTGCCA+AGG | + | chr4.2:17673080-17673099 | MS.gene028322:intron | 50.0% | |
TCCTTGGCACACACATGTAC+AGG | - | chr4.2:17673084-17673103 | None:intergenic | 50.0% | |
TTCATAATCGTTGGGGGAGG+GGG | - | chr4.2:17672130-17672149 | None:intergenic | 50.0% | |
TTCATGCGCACGCACACATA+TGG | + | chr4.2:17673266-17673285 | MS.gene028322:intron | 50.0% | |
! | TCGTCTAGAATCGGTGCAAG+AGG | + | chr4.2:17672435-17672454 | MS.gene028322:intron | 50.0% |
!! | CAGGATGTTGGCTAGTCTTC+GGG | - | chr4.2:17672630-17672649 | None:intergenic | 50.0% |
!! | GAGCTTGTTGGTACCCTTAG+AGG | + | chr4.2:17671739-17671758 | MS.gene028322:CDS | 50.0% |
ACAGCGAGATCACTGCTGAG+GGG | + | chr4.2:17673335-17673354 | MS.gene028322:intron | 55.0% | |
ACCCATCTACCCCTTGAGTG+AGG | + | chr4.2:17672745-17672764 | MS.gene028322:intron | 55.0% | |
ACCCCTTGAGTGAGGTCTGT+AGG | + | chr4.2:17672753-17672772 | MS.gene028322:intron | 55.0% | |
AGATCACTGCTGAGGGGAGA+AGG | + | chr4.2:17673341-17673360 | MS.gene028322:CDS | 55.0% | |
CAACAGCGAGATCACTGCTG+AGG | + | chr4.2:17673333-17673352 | MS.gene028322:intron | 55.0% | |
CTGGATCAGGTGAACCACCA+GGG | - | chr4.2:17673586-17673605 | None:intergenic | 55.0% | |
GACCTCACTCAAGGGGTAGA+TGG | - | chr4.2:17672750-17672769 | None:intergenic | 55.0% | |
TCATAATCGTTGGGGGAGGG+GGG | - | chr4.2:17672129-17672148 | None:intergenic | 55.0% | |
TCTGGATCAGGTGAACCACC+AGG | - | chr4.2:17673587-17673606 | None:intergenic | 55.0% | |
TGTGCAATGCAGTTGGTCCC+TGG | + | chr4.2:17673566-17673585 | MS.gene028322:intron | 55.0% | |
!! | GGCTAGTCTTCGGGCTATGA+AGG | - | chr4.2:17672621-17672640 | None:intergenic | 55.0% |
GCAATGCAGTTGGTCCCTGG+TGG | + | chr4.2:17673569-17673588 | MS.gene028322:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 17671553 | 17673610 | 17671553 | ID=MS.gene028322 |
chr4.2 | mRNA | 17671553 | 17673610 | 17671553 | ID=MS.gene028322.t1;Parent=MS.gene028322 |
chr4.2 | exon | 17671553 | 17671586 | 17671553 | ID=MS.gene028322.t1.exon1;Parent=MS.gene028322.t1 |
chr4.2 | CDS | 17671553 | 17671586 | 17671553 | ID=cds.MS.gene028322.t1;Parent=MS.gene028322.t1 |
chr4.2 | exon | 17671683 | 17671806 | 17671683 | ID=MS.gene028322.t1.exon2;Parent=MS.gene028322.t1 |
chr4.2 | CDS | 17671683 | 17671806 | 17671683 | ID=cds.MS.gene028322.t1;Parent=MS.gene028322.t1 |
chr4.2 | exon | 17673339 | 17673411 | 17673339 | ID=MS.gene028322.t1.exon3;Parent=MS.gene028322.t1 |
chr4.2 | CDS | 17673339 | 17673411 | 17673339 | ID=cds.MS.gene028322.t1;Parent=MS.gene028322.t1 |
chr4.2 | exon | 17673578 | 17673610 | 17673578 | ID=MS.gene028322.t1.exon4;Parent=MS.gene028322.t1 |
chr4.2 | CDS | 17673578 | 17673610 | 17673578 | ID=cds.MS.gene028322.t1;Parent=MS.gene028322.t1 |
Gene Sequence |
Protein sequence |