Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021879.t1 | XP_024626124.1 | 75.1 | 595 | 22 | 4 | 1 | 470 | 203 | 796 | 1.30E-235 | 825.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021879.t1 | Q3E9B5 | 51.4 | 541 | 123 | 8 | 45 | 460 | 70 | 595 | 2.0e-136 | 487.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021879.t1 | G7L599 | 74.7 | 574 | 22 | 3 | 19 | 470 | 75 | 647 | 1.3e-226 | 795.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021879.t1 | MTR_7g013270 | 96.575 | 292 | 9 | 1 | 19 | 310 | 75 | 365 | 0.0 | 580 |
MS.gene021879.t1 | MTR_7g013270 | 73.869 | 199 | 16 | 1 | 308 | 470 | 449 | 647 | 1.53e-88 | 283 |
MS.gene021879.t1 | MTR_7g005930 | 88.103 | 311 | 33 | 2 | 1 | 310 | 1 | 308 | 0.0 | 553 |
MS.gene021879.t1 | MTR_7g005930 | 68.912 | 193 | 24 | 1 | 308 | 464 | 392 | 584 | 2.11e-79 | 258 |
MS.gene021879.t1 | MTR_1g116930 | 72.101 | 276 | 73 | 2 | 35 | 310 | 24 | 295 | 9.53e-138 | 409 |
MS.gene021879.t1 | MTR_1g116930 | 48.744 | 199 | 61 | 2 | 308 | 470 | 380 | 573 | 7.98e-55 | 192 |
MS.gene021879.t1 | MTR_4g098800 | 60.839 | 286 | 108 | 2 | 26 | 310 | 28 | 310 | 1.58e-112 | 344 |
MS.gene021879.t1 | MTR_4g098800 | 41.837 | 196 | 75 | 4 | 293 | 450 | 382 | 576 | 3.36e-37 | 144 |
MS.gene021879.t1 | MTR_4g098800 | 60.839 | 286 | 108 | 2 | 26 | 310 | 93 | 375 | 5.69e-112 | 345 |
MS.gene021879.t1 | MTR_4g098800 | 41.837 | 196 | 75 | 4 | 293 | 450 | 447 | 641 | 4.33e-37 | 144 |
MS.gene021879.t1 | MTR_7g010820 | 60.839 | 286 | 106 | 3 | 26 | 310 | 18 | 298 | 9.44e-112 | 342 |
MS.gene021879.t1 | MTR_7g010820 | 41.262 | 206 | 72 | 5 | 302 | 458 | 379 | 584 | 1.07e-30 | 125 |
MS.gene021879.t1 | MTR_5g014150 | 61.189 | 286 | 107 | 2 | 26 | 310 | 36 | 318 | 8.51e-109 | 335 |
MS.gene021879.t1 | MTR_5g014150 | 41.584 | 202 | 68 | 5 | 307 | 465 | 405 | 599 | 3.80e-37 | 144 |
MS.gene021879.t1 | MTR_7g067010 | 40.493 | 284 | 161 | 4 | 28 | 310 | 18 | 294 | 4.47e-64 | 217 |
MS.gene021879.t1 | MTR_7g067010 | 35.359 | 181 | 77 | 2 | 307 | 447 | 379 | 559 | 9.39e-28 | 116 |
MS.gene021879.t1 | MTR_0294s0020 | 29.764 | 551 | 254 | 14 | 26 | 459 | 23 | 557 | 7.97e-64 | 216 |
MS.gene021879.t1 | MTR_3g462710 | 40.780 | 282 | 160 | 4 | 27 | 307 | 17 | 292 | 3.90e-63 | 214 |
MS.gene021879.t1 | MTR_3g462710 | 38.889 | 180 | 70 | 2 | 307 | 446 | 381 | 560 | 2.40e-32 | 130 |
MS.gene021879.t1 | MTR_3g112460 | 35.017 | 297 | 184 | 4 | 14 | 306 | 1 | 292 | 9.68e-62 | 211 |
MS.gene021879.t1 | MTR_3g112460 | 31.461 | 178 | 82 | 3 | 307 | 448 | 378 | 551 | 3.57e-22 | 100 |
MS.gene021879.t1 | MTR_1g042310 | 38.710 | 279 | 166 | 3 | 25 | 301 | 17 | 292 | 7.08e-60 | 206 |
MS.gene021879.t1 | MTR_7g098150 | 34.948 | 289 | 182 | 4 | 25 | 310 | 24 | 309 | 2.09e-59 | 202 |
MS.gene021879.t1 | MTR_4g015080 | 39.068 | 279 | 162 | 4 | 33 | 310 | 33 | 304 | 3.25e-59 | 204 |
MS.gene021879.t1 | MTR_4g015080 | 33.889 | 180 | 79 | 2 | 307 | 446 | 389 | 568 | 1.86e-26 | 112 |
MS.gene021879.t1 | MTR_3g112470 | 34.680 | 297 | 185 | 4 | 14 | 306 | 1 | 292 | 3.33e-59 | 204 |
MS.gene021879.t1 | MTR_3g112470 | 32.022 | 178 | 81 | 3 | 307 | 448 | 378 | 551 | 7.62e-23 | 102 |
MS.gene021879.t1 | MTR_7g098090 | 34.948 | 289 | 182 | 4 | 25 | 310 | 24 | 309 | 1.23e-58 | 203 |
MS.gene021879.t1 | MTR_7g098160 | 35.294 | 289 | 181 | 4 | 25 | 310 | 24 | 309 | 1.09e-57 | 201 |
MS.gene021879.t1 | MTR_7g098180 | 34.828 | 290 | 182 | 3 | 25 | 310 | 22 | 308 | 1.78e-57 | 200 |
MS.gene021879.t1 | MTR_1g041815 | 36.201 | 279 | 173 | 3 | 25 | 301 | 18 | 293 | 2.28e-57 | 199 |
MS.gene021879.t1 | MTR_7g098200 | 34.602 | 289 | 183 | 3 | 25 | 310 | 20 | 305 | 7.99e-57 | 198 |
MS.gene021879.t1 | MTR_1g042310 | 40.239 | 251 | 145 | 3 | 53 | 301 | 1 | 248 | 8.16e-56 | 194 |
MS.gene021879.t1 | MTR_1g041835 | 35.842 | 279 | 174 | 3 | 25 | 301 | 18 | 293 | 9.97e-56 | 195 |
MS.gene021879.t1 | MTR_1g041835 | 28.426 | 197 | 100 | 3 | 307 | 462 | 381 | 577 | 2.06e-12 | 69.7 |
MS.gene021879.t1 | MTR_1g042310 | 40.239 | 251 | 145 | 3 | 53 | 301 | 8 | 255 | 1.10e-55 | 194 |
MS.gene021879.t1 | MTR_7g098040 | 33.793 | 290 | 184 | 5 | 25 | 310 | 25 | 310 | 3.19e-55 | 194 |
MS.gene021879.t1 | MTR_7g098200 | 34.657 | 277 | 175 | 3 | 25 | 298 | 20 | 293 | 1.18e-54 | 192 |
MS.gene021879.t1 | MTR_7g098220 | 34.602 | 289 | 183 | 3 | 25 | 310 | 21 | 306 | 1.51e-54 | 192 |
MS.gene021879.t1 | MTR_1g075440 | 35.517 | 290 | 180 | 4 | 13 | 298 | 5 | 291 | 1.97e-54 | 192 |
MS.gene021879.t1 | MTR_1g075440 | 30.000 | 200 | 99 | 2 | 307 | 465 | 383 | 582 | 3.79e-20 | 94.0 |
MS.gene021879.t1 | MTR_3g112450 | 35.816 | 282 | 174 | 4 | 26 | 304 | 15 | 292 | 5.54e-54 | 190 |
MS.gene021879.t1 | MTR_3g112450 | 32.447 | 188 | 86 | 5 | 308 | 458 | 380 | 563 | 1.92e-22 | 100 |
MS.gene021879.t1 | MTR_7g098230 | 35.338 | 266 | 166 | 3 | 48 | 310 | 40 | 302 | 9.38e-53 | 187 |
MS.gene021879.t1 | MTR_3g072300 | 32.515 | 326 | 207 | 7 | 26 | 349 | 16 | 330 | 1.32e-52 | 187 |
MS.gene021879.t1 | MTR_3g072300 | 27.072 | 181 | 91 | 2 | 307 | 446 | 378 | 558 | 3.32e-15 | 78.6 |
MS.gene021879.t1 | MTR_4g024930 | 49.756 | 205 | 97 | 2 | 27 | 228 | 29 | 230 | 2.70e-52 | 186 |
MS.gene021879.t1 | MTR_4g024930 | 39.181 | 171 | 66 | 3 | 315 | 447 | 383 | 553 | 5.42e-28 | 117 |
MS.gene021879.t1 | MTR_7g098220 | 36.398 | 261 | 160 | 3 | 53 | 310 | 5 | 262 | 2.31e-51 | 182 |
MS.gene021879.t1 | MTR_1g041875 | 35.842 | 279 | 174 | 3 | 25 | 301 | 20 | 295 | 2.39e-51 | 183 |
MS.gene021879.t1 | MTR_4g019580 | 36.194 | 268 | 164 | 4 | 26 | 292 | 28 | 289 | 1.21e-50 | 181 |
MS.gene021879.t1 | MTR_4g019580 | 30.270 | 185 | 88 | 6 | 307 | 451 | 390 | 573 | 1.52e-15 | 79.7 |
MS.gene021879.t1 | MTR_1g041885 | 38.645 | 251 | 149 | 3 | 53 | 301 | 1 | 248 | 3.44e-50 | 179 |
MS.gene021879.t1 | MTR_4g033375 | 37.895 | 285 | 156 | 7 | 17 | 294 | 14 | 284 | 5.42e-50 | 178 |
MS.gene021879.t1 | MTR_4g033375 | 34.737 | 95 | 56 | 2 | 307 | 395 | 369 | 463 | 2.68e-11 | 65.9 |
MS.gene021879.t1 | MTR_4g033395 | 36.364 | 275 | 155 | 5 | 26 | 294 | 24 | 284 | 1.66e-49 | 176 |
MS.gene021879.t1 | MTR_7g065080 | 35.985 | 264 | 162 | 4 | 26 | 288 | 23 | 280 | 2.88e-49 | 177 |
MS.gene021879.t1 | MTR_5g012270 | 31.579 | 304 | 200 | 5 | 11 | 310 | 5 | 304 | 2.17e-46 | 169 |
MS.gene021879.t1 | MTR_5g012270 | 29.958 | 237 | 110 | 7 | 261 | 446 | 338 | 569 | 1.87e-20 | 94.7 |
MS.gene021879.t1 | MTR_3g069420 | 33.585 | 265 | 168 | 4 | 26 | 289 | 26 | 283 | 1.20e-45 | 167 |
MS.gene021879.t1 | MTR_5g055000 | 32.616 | 279 | 183 | 3 | 33 | 310 | 17 | 291 | 9.17e-45 | 165 |
MS.gene021879.t1 | MTR_4g033325 | 36.101 | 277 | 161 | 4 | 26 | 300 | 23 | 285 | 3.34e-44 | 163 |
MS.gene021879.t1 | MTR_4g033325 | 29.121 | 182 | 87 | 3 | 307 | 446 | 365 | 546 | 1.92e-17 | 85.5 |
MS.gene021879.t1 | MTR_3g069500 | 32.222 | 270 | 175 | 4 | 26 | 294 | 27 | 289 | 1.00e-43 | 162 |
MS.gene021879.t1 | MTR_4g033330 | 36.704 | 267 | 153 | 4 | 26 | 290 | 23 | 275 | 1.07e-43 | 161 |
MS.gene021879.t1 | MTR_4g033330 | 29.697 | 165 | 73 | 3 | 309 | 431 | 370 | 533 | 1.63e-13 | 73.2 |
MS.gene021879.t1 | MTR_5g012290 | 33.110 | 299 | 194 | 3 | 15 | 310 | 8 | 303 | 7.07e-43 | 160 |
MS.gene021879.t1 | MTR_4g033325 | 28.090 | 445 | 189 | 13 | 119 | 446 | 18 | 448 | 2.17e-42 | 156 |
MS.gene021879.t1 | MTR_4g033315 | 36.704 | 267 | 153 | 4 | 26 | 290 | 23 | 275 | 6.80e-42 | 157 |
MS.gene021879.t1 | MTR_4g033315 | 27.692 | 195 | 97 | 4 | 307 | 459 | 367 | 559 | 3.94e-17 | 84.3 |
MS.gene021879.t1 | MTR_4g033310 | 36.704 | 267 | 153 | 4 | 26 | 290 | 23 | 275 | 6.80e-42 | 157 |
MS.gene021879.t1 | MTR_4g033310 | 27.692 | 195 | 97 | 4 | 307 | 459 | 367 | 559 | 3.94e-17 | 84.3 |
MS.gene021879.t1 | MTR_3g014790 | 35.019 | 257 | 141 | 3 | 26 | 278 | 5 | 239 | 6.98e-42 | 157 |
MS.gene021879.t1 | MTR_4g101380 | 31.560 | 282 | 188 | 3 | 26 | 305 | 19 | 297 | 3.48e-41 | 155 |
MS.gene021879.t1 | MTR_4g101380 | 33.702 | 181 | 76 | 4 | 308 | 446 | 392 | 570 | 3.89e-17 | 84.3 |
MS.gene021879.t1 | MTR_4g033325 | 28.293 | 410 | 174 | 11 | 154 | 446 | 16 | 422 | 5.31e-41 | 152 |
MS.gene021879.t1 | MTR_7g006540 | 34.667 | 300 | 175 | 8 | 24 | 310 | 52 | 343 | 1.98e-40 | 154 |
MS.gene021879.t1 | MTR_3g069440 | 32.593 | 270 | 174 | 4 | 26 | 294 | 25 | 287 | 1.06e-39 | 151 |
MS.gene021879.t1 | MTR_8g087780 | 29.781 | 319 | 216 | 5 | 18 | 331 | 4 | 319 | 6.26e-39 | 149 |
MS.gene021879.t1 | MTR_4g107580 | 30.392 | 306 | 197 | 4 | 12 | 310 | 2 | 298 | 1.04e-38 | 148 |
MS.gene021879.t1 | MTR_3g005010 | 36.029 | 272 | 150 | 7 | 18 | 284 | 13 | 265 | 2.12e-38 | 147 |
MS.gene021879.t1 | MTR_3g005010 | 30.601 | 183 | 83 | 3 | 307 | 446 | 359 | 540 | 4.49e-19 | 90.5 |
MS.gene021879.t1 | MTR_5g038060 | 31.801 | 261 | 169 | 3 | 33 | 290 | 30 | 284 | 3.21e-38 | 147 |
MS.gene021879.t1 | MTR_2g017750 | 32.526 | 289 | 185 | 7 | 13 | 294 | 10 | 295 | 2.03e-37 | 145 |
MS.gene021879.t1 | MTR_8g087810 | 31.560 | 282 | 185 | 5 | 18 | 294 | 4 | 282 | 3.00e-37 | 144 |
MS.gene021879.t1 | MTR_8g469470 | 33.202 | 253 | 163 | 2 | 25 | 274 | 23 | 272 | 1.22e-36 | 142 |
MS.gene021879.t1 | MTR_7g088820 | 28.912 | 294 | 202 | 4 | 15 | 306 | 6 | 294 | 2.81e-36 | 141 |
MS.gene021879.t1 | MTR_7g088825 | 31.690 | 284 | 185 | 5 | 26 | 304 | 10 | 289 | 8.01e-36 | 140 |
MS.gene021879.t1 | MTR_4g123537 | 32.862 | 283 | 180 | 6 | 30 | 310 | 36 | 310 | 1.15e-35 | 140 |
MS.gene021879.t1 | MTR_4g123537 | 31.818 | 176 | 80 | 4 | 315 | 451 | 398 | 572 | 1.18e-20 | 95.5 |
MS.gene021879.t1 | MTR_1g026740 | 31.852 | 270 | 173 | 4 | 35 | 300 | 18 | 280 | 1.43e-35 | 139 |
MS.gene021879.t1 | MTR_8g469480 | 33.466 | 251 | 160 | 3 | 37 | 283 | 41 | 288 | 1.83e-35 | 139 |
MS.gene021879.t1 | MTR_3g100980 | 28.826 | 281 | 190 | 4 | 31 | 306 | 13 | 288 | 4.48e-35 | 137 |
MS.gene021879.t1 | MTR_4g114340 | 33.574 | 277 | 179 | 3 | 36 | 311 | 26 | 298 | 9.08e-35 | 137 |
MS.gene021879.t1 | MTR_3g462710 | 38.624 | 189 | 109 | 4 | 120 | 307 | 1 | 183 | 2.28e-34 | 134 |
MS.gene021879.t1 | MTR_3g462710 | 38.889 | 180 | 70 | 2 | 307 | 446 | 272 | 451 | 6.48e-33 | 130 |
MS.gene021879.t1 | MTR_4g107670 | 29.012 | 324 | 206 | 7 | 28 | 336 | 18 | 332 | 6.99e-34 | 134 |
MS.gene021879.t1 | MTR_2g005130 | 33.459 | 266 | 170 | 2 | 11 | 274 | 15 | 275 | 1.69e-33 | 133 |
MS.gene021879.t1 | MTR_2g005130 | 31.122 | 196 | 91 | 5 | 307 | 464 | 385 | 574 | 7.18e-18 | 86.7 |
MS.gene021879.t1 | MTR_1g009200 | 29.008 | 262 | 185 | 1 | 35 | 296 | 28 | 288 | 1.76e-33 | 133 |
MS.gene021879.t1 | MTR_7g088790 | 32.234 | 273 | 180 | 3 | 35 | 306 | 30 | 298 | 2.44e-33 | 133 |
MS.gene021879.t1 | MTR_5g038190 | 31.086 | 267 | 177 | 3 | 21 | 283 | 11 | 274 | 2.87e-33 | 132 |
MS.gene021879.t1 | MTR_8g038880 | 34.286 | 245 | 139 | 2 | 34 | 278 | 20 | 242 | 3.55e-33 | 132 |
MS.gene021879.t1 | MTR_4g107510 | 28.727 | 275 | 191 | 3 | 37 | 310 | 39 | 309 | 5.99e-33 | 132 |
MS.gene021879.t1 | MTR_1g085090 | 28.929 | 280 | 185 | 5 | 33 | 310 | 18 | 285 | 5.53e-32 | 129 |
MS.gene021879.t1 | MTR_1g085090 | 27.442 | 215 | 99 | 9 | 309 | 469 | 366 | 577 | 8.05e-13 | 70.9 |
MS.gene021879.t1 | MTR_2g093160 | 29.371 | 286 | 188 | 4 | 13 | 296 | 4 | 277 | 7.85e-32 | 128 |
MS.gene021879.t1 | MTR_8g469310 | 35.169 | 236 | 149 | 2 | 36 | 271 | 28 | 259 | 7.99e-32 | 128 |
MS.gene021879.t1 | MTR_7g065080 | 34.091 | 220 | 134 | 6 | 93 | 310 | 3 | 213 | 1.01e-31 | 127 |
MS.gene021879.t1 | MTR_4g107530 | 29.268 | 246 | 170 | 2 | 37 | 281 | 36 | 278 | 1.11e-31 | 128 |
MS.gene021879.t1 | MTR_1g026750 | 32.246 | 276 | 176 | 3 | 29 | 300 | 13 | 281 | 1.49e-31 | 127 |
MS.gene021879.t1 | MTR_7g098200 | 34.536 | 194 | 121 | 3 | 120 | 310 | 1 | 191 | 2.13e-31 | 126 |
MS.gene021879.t1 | MTR_4g107610 | 28.912 | 294 | 201 | 4 | 9 | 301 | 6 | 292 | 2.17e-31 | 127 |
MS.gene021879.t1 | MTR_5g038380 | 32.653 | 245 | 161 | 2 | 27 | 271 | 21 | 261 | 8.53e-31 | 125 |
MS.gene021879.t1 | MTR_7g111260 | 26.014 | 296 | 208 | 4 | 33 | 327 | 18 | 303 | 3.98e-30 | 124 |
MS.gene021879.t1 | MTR_1g026770 | 29.433 | 282 | 190 | 3 | 29 | 310 | 10 | 282 | 4.59e-30 | 123 |
MS.gene021879.t1 | MTR_3g100980 | 26.214 | 309 | 190 | 5 | 31 | 306 | 13 | 316 | 1.12e-29 | 122 |
MS.gene021879.t1 | MTR_7g088820 | 30.172 | 232 | 155 | 4 | 77 | 306 | 6 | 232 | 6.19e-29 | 119 |
MS.gene021879.t1 | MTR_7g064780 | 28.205 | 273 | 190 | 3 | 35 | 305 | 27 | 295 | 1.38e-28 | 119 |
MS.gene021879.t1 | MTR_2g093180 | 29.496 | 278 | 183 | 3 | 13 | 289 | 4 | 269 | 1.51e-27 | 115 |
MS.gene021879.t1 | MTR_2g093640 | 29.329 | 283 | 185 | 4 | 13 | 292 | 4 | 274 | 1.96e-26 | 112 |
MS.gene021879.t1 | MTR_7g051830 | 29.057 | 265 | 173 | 4 | 15 | 277 | 4 | 255 | 2.09e-26 | 112 |
MS.gene021879.t1 | MTR_7g064800 | 27.536 | 276 | 194 | 3 | 33 | 305 | 25 | 297 | 2.33e-26 | 112 |
MS.gene021879.t1 | MTR_2g101640 | 29.183 | 257 | 177 | 3 | 33 | 287 | 22 | 275 | 9.95e-26 | 110 |
MS.gene021879.t1 | MTR_4g033385 | 37.363 | 182 | 94 | 5 | 119 | 294 | 16 | 183 | 1.46e-25 | 109 |
MS.gene021879.t1 | MTR_4g033385 | 25.641 | 195 | 101 | 4 | 307 | 459 | 268 | 460 | 7.22e-16 | 80.1 |
MS.gene021879.t1 | MTR_2g101610 | 29.961 | 257 | 175 | 3 | 33 | 287 | 26 | 279 | 2.95e-25 | 109 |
MS.gene021879.t1 | MTR_2g101650 | 29.020 | 255 | 175 | 4 | 33 | 285 | 23 | 273 | 4.13e-25 | 108 |
MS.gene021879.t1 | MTR_4g033310 | 35.912 | 181 | 102 | 3 | 26 | 206 | 23 | 189 | 4.42e-25 | 108 |
MS.gene021879.t1 | MTR_4g033310 | 27.692 | 195 | 97 | 4 | 307 | 459 | 303 | 495 | 2.80e-17 | 84.7 |
MS.gene021879.t1 | MTR_7g052600 | 29.502 | 261 | 167 | 4 | 15 | 272 | 4 | 250 | 9.54e-25 | 107 |
MS.gene021879.t1 | MTR_5g085850 | 30.556 | 252 | 169 | 2 | 26 | 274 | 22 | 270 | 2.77e-24 | 106 |
MS.gene021879.t1 | MTR_5g085850 | 26.842 | 190 | 102 | 3 | 307 | 461 | 384 | 571 | 1.93e-16 | 82.4 |
MS.gene021879.t1 | MTR_7g051880 | 27.668 | 253 | 170 | 3 | 26 | 278 | 17 | 256 | 3.86e-24 | 105 |
MS.gene021879.t1 | MTR_8g103233 | 29.218 | 243 | 169 | 2 | 31 | 273 | 14 | 253 | 1.19e-23 | 104 |
MS.gene021879.t1 | MTR_2g101590 | 29.183 | 257 | 177 | 3 | 33 | 287 | 25 | 278 | 1.42e-23 | 104 |
MS.gene021879.t1 | MTR_1g057460 | 28.044 | 271 | 181 | 5 | 33 | 301 | 43 | 301 | 1.29e-21 | 98.2 |
MS.gene021879.t1 | MTR_4g011280 | 29.297 | 256 | 176 | 3 | 34 | 287 | 32 | 284 | 1.51e-21 | 98.2 |
MS.gene021879.t1 | MTR_7g088820 | 29.032 | 186 | 125 | 4 | 123 | 306 | 4 | 184 | 2.10e-20 | 94.0 |
MS.gene021879.t1 | MTR_6g008690 | 30.870 | 230 | 135 | 4 | 33 | 253 | 6 | 220 | 3.50e-20 | 93.6 |
MS.gene021879.t1 | MTR_6g008690 | 25.824 | 182 | 93 | 3 | 307 | 446 | 352 | 533 | 4.45e-15 | 77.8 |
MS.gene021879.t1 | MTR_2g101560 | 29.070 | 258 | 174 | 4 | 33 | 286 | 26 | 278 | 6.17e-20 | 93.2 |
MS.gene021879.t1 | MTR_7g098210 | 26.894 | 264 | 118 | 7 | 53 | 310 | 1 | 195 | 1.38e-17 | 85.1 |
MS.gene021879.t1 | MTR_0236s0050 | 28.910 | 211 | 136 | 5 | 93 | 301 | 32 | 230 | 2.77e-17 | 84.7 |
MS.gene021879.t1 | MTR_1g057460 | 28.910 | 211 | 136 | 5 | 93 | 301 | 32 | 230 | 9.99e-17 | 82.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021879.t1 | AT5G19640 | 72.325 | 271 | 67 | 2 | 35 | 304 | 60 | 323 | 6.22e-136 | 405 |
MS.gene021879.t1 | AT5G19640 | 44.211 | 190 | 61 | 3 | 308 | 460 | 414 | 595 | 1.90e-40 | 153 |
MS.gene021879.t1 | AT1G32450 | 56.250 | 304 | 124 | 5 | 13 | 310 | 14 | 314 | 1.62e-104 | 324 |
MS.gene021879.t1 | AT1G32450 | 40.291 | 206 | 80 | 5 | 302 | 465 | 395 | 599 | 1.49e-36 | 142 |
MS.gene021879.t1 | AT4G21680 | 56.993 | 286 | 116 | 3 | 26 | 310 | 20 | 299 | 2.53e-99 | 310 |
MS.gene021879.t1 | AT4G21680 | 38.547 | 179 | 67 | 3 | 316 | 451 | 397 | 575 | 3.98e-28 | 117 |
MS.gene021879.t1 | AT2G02020 | 31.084 | 489 | 258 | 12 | 25 | 441 | 33 | 514 | 9.36e-75 | 244 |
MS.gene021879.t1 | AT2G02020 | 30.196 | 510 | 256 | 11 | 25 | 441 | 33 | 535 | 3.26e-72 | 238 |
MS.gene021879.t1 | AT3G54140 | 40.000 | 285 | 164 | 4 | 25 | 308 | 15 | 293 | 2.71e-65 | 220 |
MS.gene021879.t1 | AT3G54140 | 40.884 | 181 | 67 | 2 | 307 | 447 | 381 | 561 | 5.59e-36 | 140 |
MS.gene021879.t1 | AT3G54140 | 40.000 | 285 | 164 | 4 | 25 | 308 | 15 | 293 | 2.71e-65 | 220 |
MS.gene021879.t1 | AT3G54140 | 40.884 | 181 | 67 | 2 | 307 | 447 | 381 | 561 | 5.59e-36 | 140 |
MS.gene021879.t1 | AT2G02040 | 37.762 | 286 | 172 | 3 | 26 | 310 | 33 | 313 | 2.21e-62 | 213 |
MS.gene021879.t1 | AT2G02040 | 33.702 | 181 | 79 | 2 | 308 | 447 | 399 | 579 | 5.82e-24 | 105 |
MS.gene021879.t1 | AT1G62200 | 34.835 | 333 | 211 | 4 | 25 | 355 | 43 | 371 | 5.30e-58 | 201 |
MS.gene021879.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 309 | 447 | 414 | 586 | 3.38e-23 | 103 |
MS.gene021879.t1 | AT1G62200 | 35.880 | 301 | 179 | 4 | 25 | 323 | 43 | 331 | 7.33e-58 | 201 |
MS.gene021879.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 309 | 447 | 443 | 615 | 3.64e-23 | 103 |
MS.gene021879.t1 | AT1G62200 | 36.213 | 301 | 178 | 4 | 25 | 323 | 57 | 345 | 1.30e-57 | 201 |
MS.gene021879.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 309 | 447 | 457 | 629 | 4.10e-23 | 103 |
MS.gene021879.t1 | AT5G01180 | 36.299 | 281 | 171 | 5 | 25 | 304 | 16 | 289 | 1.95e-55 | 194 |
MS.gene021879.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 307 | 446 | 381 | 560 | 3.23e-31 | 127 |
MS.gene021879.t1 | AT5G01180 | 36.299 | 281 | 171 | 5 | 25 | 304 | 16 | 289 | 1.95e-55 | 194 |
MS.gene021879.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 307 | 446 | 381 | 560 | 3.23e-31 | 127 |
MS.gene021879.t1 | AT5G01180 | 36.299 | 281 | 171 | 5 | 25 | 304 | 16 | 289 | 1.95e-55 | 194 |
MS.gene021879.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 307 | 446 | 381 | 560 | 3.23e-31 | 127 |
MS.gene021879.t1 | AT1G72140 | 26.742 | 531 | 272 | 12 | 26 | 446 | 26 | 549 | 1.53e-53 | 189 |
MS.gene021879.t1 | AT2G40460 | 33.446 | 296 | 186 | 5 | 14 | 304 | 1 | 290 | 5.17e-49 | 177 |
MS.gene021879.t1 | AT2G40460 | 28.729 | 181 | 88 | 2 | 307 | 446 | 372 | 552 | 1.31e-14 | 76.6 |
MS.gene021879.t1 | AT2G37900 | 34.266 | 286 | 178 | 5 | 26 | 310 | 30 | 306 | 8.81e-48 | 173 |
MS.gene021879.t1 | AT1G12110 | 36.082 | 291 | 176 | 5 | 26 | 310 | 19 | 305 | 2.57e-47 | 172 |
MS.gene021879.t1 | AT5G46040 | 31.633 | 294 | 186 | 6 | 20 | 310 | 18 | 299 | 5.73e-47 | 171 |
MS.gene021879.t1 | AT5G46040 | 29.293 | 198 | 99 | 3 | 308 | 464 | 382 | 579 | 3.85e-13 | 72.0 |
MS.gene021879.t1 | AT5G13400 | 35.395 | 291 | 177 | 6 | 24 | 306 | 53 | 340 | 7.10e-44 | 163 |
MS.gene021879.t1 | AT5G46050 | 32.281 | 285 | 181 | 5 | 20 | 301 | 18 | 293 | 3.69e-43 | 160 |
MS.gene021879.t1 | AT5G46050 | 27.363 | 201 | 105 | 3 | 307 | 466 | 381 | 581 | 3.96e-13 | 72.0 |
MS.gene021879.t1 | AT5G11570 | 28.602 | 472 | 268 | 11 | 35 | 446 | 14 | 476 | 3.79e-43 | 159 |
MS.gene021879.t1 | AT3G54450 | 32.800 | 250 | 149 | 2 | 33 | 282 | 11 | 241 | 9.04e-42 | 156 |
MS.gene021879.t1 | AT3G54450 | 28.571 | 196 | 93 | 6 | 307 | 457 | 359 | 552 | 2.57e-17 | 85.1 |
MS.gene021879.t1 | AT2G26690 | 32.464 | 345 | 212 | 8 | 1 | 340 | 1 | 329 | 2.98e-41 | 155 |
MS.gene021879.t1 | AT1G72125 | 32.069 | 290 | 183 | 3 | 8 | 293 | 3 | 282 | 3.38e-41 | 155 |
MS.gene021879.t1 | AT1G22570 | 31.903 | 373 | 217 | 10 | 34 | 383 | 30 | 388 | 1.26e-40 | 153 |
MS.gene021879.t1 | AT1G22570 | 28.750 | 160 | 75 | 4 | 307 | 427 | 379 | 538 | 1.03e-12 | 70.5 |
MS.gene021879.t1 | AT1G69870 | 31.481 | 270 | 178 | 4 | 31 | 298 | 48 | 312 | 1.17e-39 | 151 |
MS.gene021879.t1 | AT3G53960 | 32.971 | 276 | 161 | 8 | 26 | 292 | 29 | 289 | 1.73e-39 | 150 |
MS.gene021879.t1 | AT3G53960 | 28.090 | 178 | 90 | 3 | 307 | 446 | 393 | 570 | 2.55e-15 | 79.0 |
MS.gene021879.t1 | AT1G72120 | 31.864 | 295 | 186 | 4 | 8 | 298 | 3 | 286 | 3.27e-38 | 146 |
MS.gene021879.t1 | AT1G68570 | 30.928 | 291 | 194 | 4 | 21 | 310 | 12 | 296 | 1.43e-37 | 145 |
MS.gene021879.t1 | AT1G22540 | 32.331 | 266 | 167 | 4 | 26 | 285 | 22 | 280 | 6.59e-37 | 143 |
MS.gene021879.t1 | AT1G22540 | 28.415 | 183 | 89 | 2 | 306 | 446 | 367 | 549 | 7.10e-19 | 89.7 |
MS.gene021879.t1 | AT1G22550 | 37.455 | 275 | 160 | 6 | 34 | 302 | 30 | 298 | 8.04e-37 | 142 |
MS.gene021879.t1 | AT2G26690 | 32.886 | 298 | 189 | 6 | 48 | 340 | 5 | 296 | 1.31e-36 | 142 |
MS.gene021879.t1 | AT1G22570 | 31.868 | 364 | 211 | 10 | 43 | 383 | 2 | 351 | 1.35e-36 | 141 |
MS.gene021879.t1 | AT1G22570 | 28.750 | 160 | 75 | 4 | 307 | 427 | 342 | 501 | 1.01e-12 | 70.5 |
MS.gene021879.t1 | AT2G26690 | 33.564 | 289 | 181 | 6 | 57 | 340 | 2 | 284 | 3.94e-36 | 140 |
MS.gene021879.t1 | AT1G72130 | 35.409 | 257 | 149 | 6 | 22 | 274 | 12 | 255 | 7.00e-36 | 140 |
MS.gene021879.t1 | AT1G72130 | 27.684 | 177 | 91 | 2 | 306 | 446 | 355 | 530 | 1.50e-16 | 82.4 |
MS.gene021879.t1 | AT2G37900 | 34.468 | 235 | 144 | 5 | 77 | 310 | 2 | 227 | 7.11e-36 | 139 |
MS.gene021879.t1 | AT1G68570 | 31.579 | 266 | 177 | 3 | 46 | 310 | 5 | 266 | 2.75e-35 | 138 |
MS.gene021879.t1 | AT1G18880 | 32.540 | 252 | 164 | 4 | 37 | 286 | 22 | 269 | 8.43e-35 | 137 |
MS.gene021879.t1 | AT3G45690 | 29.730 | 259 | 173 | 2 | 35 | 292 | 19 | 269 | 1.95e-34 | 135 |
MS.gene021879.t1 | AT5G28470 | 27.797 | 295 | 207 | 2 | 20 | 311 | 3 | 294 | 3.78e-34 | 135 |
MS.gene021879.t1 | AT5G28470 | 27.797 | 295 | 207 | 2 | 20 | 311 | 3 | 294 | 4.37e-34 | 135 |
MS.gene021879.t1 | AT1G27080 | 31.985 | 272 | 179 | 4 | 26 | 296 | 6 | 272 | 4.45e-34 | 135 |
MS.gene021879.t1 | AT1G69850 | 32.549 | 255 | 155 | 4 | 26 | 274 | 17 | 260 | 5.46e-33 | 132 |
MS.gene021879.t1 | AT5G62680 | 27.839 | 273 | 190 | 3 | 14 | 285 | 26 | 292 | 6.93e-33 | 132 |
MS.gene021879.t1 | AT3G45710 | 29.412 | 255 | 172 | 1 | 33 | 287 | 20 | 266 | 2.05e-32 | 130 |
MS.gene021879.t1 | AT3G45680 | 28.839 | 267 | 182 | 1 | 32 | 298 | 18 | 276 | 4.56e-32 | 129 |
MS.gene021879.t1 | AT3G45650 | 28.000 | 275 | 190 | 1 | 25 | 299 | 13 | 279 | 5.74e-32 | 129 |
MS.gene021879.t1 | AT1G52190 | 31.373 | 306 | 198 | 5 | 10 | 311 | 3 | 300 | 6.78e-32 | 129 |
MS.gene021879.t1 | AT3G45650 | 28.000 | 275 | 190 | 1 | 25 | 299 | 13 | 279 | 7.12e-32 | 129 |
MS.gene021879.t1 | AT1G59740 | 29.682 | 283 | 194 | 3 | 10 | 291 | 18 | 296 | 1.02e-31 | 128 |
MS.gene021879.t1 | AT3G45720 | 27.622 | 286 | 195 | 2 | 17 | 302 | 2 | 275 | 2.69e-31 | 127 |
MS.gene021879.t1 | AT3G25260 | 27.273 | 264 | 177 | 3 | 13 | 276 | 2 | 250 | 3.90e-31 | 126 |
MS.gene021879.t1 | AT3G47960 | 30.081 | 246 | 168 | 2 | 37 | 282 | 64 | 305 | 6.84e-31 | 126 |
MS.gene021879.t1 | AT5G62730 | 34.000 | 250 | 139 | 6 | 26 | 271 | 48 | 275 | 7.36e-31 | 125 |
MS.gene021879.t1 | AT3G16180 | 30.909 | 275 | 181 | 4 | 11 | 283 | 5 | 272 | 8.42e-31 | 125 |
MS.gene021879.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 33 | 299 | 20 | 278 | 1.23e-30 | 125 |
MS.gene021879.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 33 | 299 | 20 | 278 | 1.23e-30 | 125 |
MS.gene021879.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 33 | 299 | 41 | 299 | 1.64e-30 | 124 |
MS.gene021879.t1 | AT5G62730 | 34.894 | 235 | 127 | 6 | 41 | 271 | 4 | 216 | 1.00e-29 | 122 |
MS.gene021879.t1 | AT3G45700 | 27.969 | 261 | 180 | 1 | 36 | 296 | 18 | 270 | 1.63e-29 | 121 |
MS.gene021879.t1 | AT3G21670 | 34.109 | 258 | 162 | 4 | 33 | 285 | 27 | 281 | 4.70e-29 | 120 |
MS.gene021879.t1 | AT3G21670 | 29.146 | 199 | 95 | 4 | 307 | 469 | 386 | 574 | 7.65e-15 | 77.4 |
MS.gene021879.t1 | AT1G33440 | 30.208 | 288 | 189 | 4 | 26 | 310 | 30 | 308 | 2.10e-26 | 112 |
MS.gene021879.t1 | AT1G33440 | 34.884 | 172 | 70 | 4 | 315 | 446 | 398 | 567 | 1.13e-18 | 89.4 |
MS.gene021879.t1 | AT5G14940 | 29.555 | 247 | 150 | 4 | 33 | 267 | 6 | 240 | 2.30e-26 | 112 |
MS.gene021879.t1 | AT5G14940 | 23.784 | 185 | 101 | 3 | 307 | 451 | 359 | 543 | 5.41e-14 | 74.7 |
MS.gene021879.t1 | AT1G27080 | 31.489 | 235 | 155 | 4 | 63 | 296 | 1 | 230 | 8.00e-26 | 110 |
MS.gene021879.t1 | AT3G25280 | 21.756 | 524 | 292 | 11 | 26 | 446 | 13 | 521 | 9.27e-26 | 110 |
MS.gene021879.t1 | AT1G27040 | 30.645 | 248 | 168 | 2 | 26 | 272 | 19 | 263 | 2.60e-25 | 109 |
MS.gene021879.t1 | AT1G27040 | 30.645 | 248 | 168 | 2 | 26 | 272 | 15 | 259 | 2.99e-25 | 109 |
MS.gene021879.t1 | AT1G69860 | 29.388 | 245 | 158 | 4 | 37 | 274 | 21 | 257 | 2.39e-24 | 106 |
MS.gene021879.t1 | AT5G46050 | 34.426 | 183 | 113 | 4 | 122 | 301 | 3 | 181 | 1.29e-23 | 103 |
MS.gene021879.t1 | AT5G46050 | 27.363 | 201 | 105 | 3 | 307 | 466 | 269 | 469 | 2.97e-13 | 72.0 |
MS.gene021879.t1 | AT3G01350 | 29.130 | 230 | 142 | 3 | 33 | 253 | 6 | 223 | 1.82e-23 | 103 |
MS.gene021879.t1 | AT1G27040 | 30.702 | 228 | 154 | 2 | 46 | 272 | 7 | 231 | 8.35e-23 | 101 |
MS.gene021879.t1 | AT1G72130 | 27.684 | 177 | 91 | 2 | 306 | 446 | 237 | 412 | 9.24e-17 | 82.8 |
MS.gene021879.t1 | AT1G72130 | 32.331 | 133 | 84 | 3 | 145 | 274 | 8 | 137 | 3.82e-14 | 74.7 |
MS.gene021879.t1 | AT1G72130 | 27.684 | 177 | 91 | 2 | 306 | 446 | 237 | 412 | 9.24e-17 | 82.8 |
MS.gene021879.t1 | AT1G72130 | 32.331 | 133 | 84 | 3 | 145 | 274 | 8 | 137 | 3.82e-14 | 74.7 |
MS.gene021879.t1 | AT2G38100 | 25.573 | 262 | 170 | 7 | 52 | 311 | 9 | 247 | 2.00e-12 | 69.7 |
MS.gene021879.t1 | AT2G38100 | 25.397 | 252 | 164 | 6 | 62 | 311 | 2 | 231 | 2.10e-12 | 69.7 |
MS.gene021879.t1 | AT2G38100 | 25.573 | 262 | 170 | 7 | 52 | 311 | 15 | 253 | 2.33e-12 | 69.3 |
Find 131 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCTTAGTGATTCTTAT+TGG | 0.218343 | 7.1:+82486443 | MS.gene021879:CDS |
CTTTCAGCTCTTCTTTGTTC+TGG | 0.227633 | 7.1:+82486489 | MS.gene021879:CDS |
AATCTTTCTGCTTCCTTTGA+TGG | 0.235148 | 7.1:-82487262 | None:intergenic |
ATTCTATTTGTCAATATATA+TGG | 0.239456 | 7.1:+82486843 | MS.gene021879:CDS |
CATTCATTGATGCAGGGTTT+AGG | 0.255802 | 7.1:+82486721 | MS.gene021879:intron |
ATTCCTTAGTGATTCTTATT+GGG | 0.273297 | 7.1:+82486444 | MS.gene021879:CDS |
TATATGGTTGCATTTGGATA+TGG | 0.287046 | 7.1:+82486859 | MS.gene021879:CDS |
ATTCATTGATGCAGGGTTTA+GGG | 0.288312 | 7.1:+82486722 | MS.gene021879:intron |
TTGGCAACACTGGCATTCTT+TGG | 0.290103 | 7.1:+82486304 | MS.gene021879:CDS |
TTCCTTTGATGGCGGATTCA+TGG | 0.294103 | 7.1:-82487251 | None:intergenic |
ATAGAAGGAAATCATGTTAA+TGG | 0.295194 | 7.1:+82486111 | MS.gene021879:CDS |
TCAATATATATGGTTGCATT+TGG | 0.313334 | 7.1:+82486853 | MS.gene021879:CDS |
TCCTGTCATAAGAGTAATTC+AGG | 0.322552 | 7.1:+82487158 | MS.gene021879:CDS |
TTCTGCACTCCCACGATATA+AGG | 0.324852 | 7.1:+82487283 | MS.gene021879:CDS |
TGCCCAACATTCAAGTTATT+CGG | 0.332934 | 7.1:-82488159 | None:intergenic |
TTGGTTTATTATGAAGATTC+CGG | 0.335994 | 7.1:+82487030 | MS.gene021879:CDS |
GTTAATGGAAAAGTGGCAAT+TGG | 0.353174 | 7.1:+82486126 | MS.gene021879:CDS |
CTGTTATTGATCAAACCATT+AGG | 0.361766 | 7.1:+82486766 | MS.gene021879:CDS |
CACTGCTAAAGGCGAAGAAC+CGG | 0.369409 | 7.1:+82488128 | MS.gene021879:CDS |
CAACCTACCTTAGCAACCTT+TGG | 0.375413 | 7.1:+82486889 | MS.gene021879:CDS |
ATCTTCATAATAAACCAAAA+TGG | 0.378774 | 7.1:-82487025 | None:intergenic |
CTTGGCGAAGGACTCTTGTT+AGG | 0.382586 | 7.1:-82486351 | None:intergenic |
CAATCGCTTCATCGTCCTCT+TGG | 0.393715 | 7.1:-82488302 | None:intergenic |
CAAGTTCTTGTTCCCTTGGC+CGG | 0.396582 | 7.1:+82487766 | MS.gene021879:CDS |
TGAAGTTCGCTTATCCCCTT+AGG | 0.399055 | 7.1:-82487805 | None:intergenic |
ATTCCACAGTATGTTCTTGT+TGG | 0.400555 | 7.1:+82487952 | MS.gene021879:CDS |
GTTCTGTGCTCGGTGGTACA+AGG | 0.406351 | 7.1:+82488242 | MS.gene021879:CDS |
CTTTGGAGTCGGAGTGAACT+TGG | 0.412303 | 7.1:+82486321 | MS.gene021879:CDS |
GGTATGTGGACGTTGGGTTT+CGG | 0.415369 | 7.1:+82487051 | MS.gene021879:CDS |
ATGGGAGTTGGCCTAGTTAT+CGG | 0.422212 | 7.1:+82487832 | MS.gene021879:CDS |
TCGTCAAGTTCTTGTTCCCT+TGG | 0.427315 | 7.1:+82487762 | MS.gene021879:CDS |
TGTTCATTACCGCAACCTAA+TGG | 0.427677 | 7.1:-82486781 | None:intergenic |
TCAGCTGCTTCAATCTTGTC+AGG | 0.436426 | 7.1:-82485939 | None:intergenic |
AAATTAAAATAGGTGATAGA+AGG | 0.440132 | 7.1:+82486096 | MS.gene021879:intron |
CGAAGTTGGTTCGTTGCAAA+CGG | 0.447191 | 7.1:-82486806 | None:intergenic |
TAAAGTTGGTCCTCCTTGGC+AGG | 0.448949 | 7.1:-82487216 | None:intergenic |
TACCGAATAACTTGAATGTT+GGG | 0.450616 | 7.1:+82488157 | MS.gene021879:CDS |
TGCAACGAACCAACTTCGTT+GGG | 0.450911 | 7.1:+82486811 | MS.gene021879:CDS |
CTGGTGCAACGGAGTTTGTA+AGG | 0.457926 | 7.1:+82487875 | MS.gene021879:CDS |
TAGCAGCCTCGGCACTGTCT+TGG | 0.458392 | 7.1:-82486369 | None:intergenic |
TTGCAACGAACCAACTTCGT+TGG | 0.459621 | 7.1:+82486810 | MS.gene021879:CDS |
GAACCAACTTCGTTGGGAAC+AGG | 0.460262 | 7.1:+82486817 | MS.gene021879:CDS |
GCCTTGATTTCATTCTTAGC+AGG | 0.466900 | 7.1:+82487099 | MS.gene021879:CDS |
TCGTTGCTGCCGCTAGGAAG+TGG | 0.472819 | 7.1:+82487184 | MS.gene021879:CDS |
GATTCCGGTATGTGGACGTT+GGG | 0.474446 | 7.1:+82487045 | MS.gene021879:CDS |
AAAATTAAGTGGTAATCCTA+AGG | 0.475355 | 7.1:+82487789 | MS.gene021879:CDS |
CTCGTAAAGTTGGTCCTCCT+TGG | 0.477703 | 7.1:-82487220 | None:intergenic |
ATAATAAACCAAAATGGTGT+TGG | 0.477746 | 7.1:-82487019 | None:intergenic |
GATAAGCGAACTTCAAAGAA+TGG | 0.480783 | 7.1:+82487813 | MS.gene021879:CDS |
TCGAAGATATCGTTATGTTA+AGG | 0.483894 | 7.1:+82487125 | MS.gene021879:CDS |
TGTAGTGTCCTTGTATGTAC+TGG | 0.486453 | 7.1:+82487733 | MS.gene021879:intron |
TCCTGCTAAGAATGAAATCA+AGG | 0.489901 | 7.1:-82487100 | None:intergenic |
AACAATGTCAGCAAGTGGAC+TGG | 0.495272 | 7.1:+82486391 | MS.gene021879:CDS |
TTAATGGAAAAGTGGCAATT+GGG | 0.497820 | 7.1:+82486127 | MS.gene021879:CDS |
ACCTGAATTACTCTTATGAC+AGG | 0.498448 | 7.1:-82487159 | None:intergenic |
TCGTCTACGTGTTCTGTGCT+CGG | 0.499189 | 7.1:+82488232 | MS.gene021879:CDS |
TATATATTGACAAATAGAAT+AGG | 0.502301 | 7.1:-82486840 | None:intergenic |
GGCCGTCAACCTCGTAAAGT+TGG | 0.503324 | 7.1:-82487230 | None:intergenic |
AAGTTATTCGGTATCCATCC+CGG | 0.505472 | 7.1:-82488147 | None:intergenic |
ATTATGAAGATTCCGGTATG+TGG | 0.513063 | 7.1:+82487037 | MS.gene021879:CDS |
CCCTTGGCCGGAAAATTAAG+TGG | 0.513372 | 7.1:+82487778 | MS.gene021879:CDS |
TTGATCAAACCATTAGGTTG+CGG | 0.514440 | 7.1:+82486772 | MS.gene021879:CDS |
ACATGTTATGCCGGGAGAGA+AGG | 0.515883 | 7.1:+82487903 | MS.gene021879:CDS |
ATACCGAATAACTTGAATGT+TGG | 0.527198 | 7.1:+82488156 | MS.gene021879:CDS |
TTCTGTGCTCGGTGGTACAA+GGG | 0.528036 | 7.1:+82488243 | MS.gene021879:CDS |
ATCAAATTGATCAGCTCCAA+AGG | 0.528289 | 7.1:-82486905 | None:intergenic |
GAAACCCAACGTCCACATAC+CGG | 0.528818 | 7.1:-82487049 | None:intergenic |
TGAATGTTGGGCACATGGAT+TGG | 0.529142 | 7.1:+82488169 | MS.gene021879:CDS |
TAACTTGAATGTTGGGCACA+TGG | 0.530856 | 7.1:+82488164 | MS.gene021879:CDS |
GTGGCAATTGGGAAGAGTAA+AGG | 0.531735 | 7.1:+82486138 | MS.gene021879:CDS |
TATCGTTATGTTAAGGCGTG+TGG | 0.532404 | 7.1:+82487132 | MS.gene021879:CDS |
CTTTCTGCTTCCTTTGATGG+CGG | 0.532701 | 7.1:-82487259 | None:intergenic |
TTGGGAAGAGTAAAGGAGGA+TGG | 0.532777 | 7.1:+82486145 | MS.gene021879:CDS |
AAGGGCGTCAATAACTTTGA+AGG | 0.533090 | 7.1:+82488261 | MS.gene021879:CDS |
AGGCCTGTTCCCAACGAAGT+TGG | 0.534570 | 7.1:-82486820 | None:intergenic |
AAGGCTAAAACATGTTATGC+CGG | 0.535790 | 7.1:+82487894 | MS.gene021879:CDS |
TCGCAAACATTCCGATAACT+AGG | 0.538544 | 7.1:-82487843 | None:intergenic |
TAATCAAGCATTGGCAACAC+TGG | 0.540136 | 7.1:+82486294 | MS.gene021879:CDS |
TTCCTTAGTGATTCTTATTG+GGG | 0.541192 | 7.1:+82486445 | MS.gene021879:CDS |
AAAGAACTAGCCTTCTCTCC+CGG | 0.541210 | 7.1:-82487913 | None:intergenic |
ATGGTTGCATTTGGATATGG+AGG | 0.541387 | 7.1:+82486862 | MS.gene021879:CDS |
AAATTAAGTGGTAATCCTAA+GGG | 0.543683 | 7.1:+82487790 | MS.gene021879:CDS |
GGCCATGAATCCGCCATCAA+AGG | 0.545291 | 7.1:+82487249 | MS.gene021879:CDS |
TTCCCCAATAAGAATCACTA+AGG | 0.545318 | 7.1:-82486447 | None:intergenic |
AAATCATGTTAATGGAAAAG+TGG | 0.547233 | 7.1:+82486119 | MS.gene021879:CDS |
GACCAACTTTACGAGGTTGA+CGG | 0.548138 | 7.1:+82487228 | MS.gene021879:CDS |
ATCAGCTCCAAAGGTTGCTA+AGG | 0.551652 | 7.1:-82486896 | None:intergenic |
ATGTTTGCGATGGTTGCAGC+TGG | 0.554672 | 7.1:+82487856 | MS.gene021879:CDS |
AGGCTAAAACATGTTATGCC+GGG | 0.557548 | 7.1:+82487895 | MS.gene021879:CDS |
ATAAGCGAACTTCAAAGAAT+GGG | 0.559609 | 7.1:+82487814 | MS.gene021879:CDS |
AACATATGTACCTTATATCG+TGG | 0.561166 | 7.1:-82487293 | None:intergenic |
CCTCGGCACTGTCTTGGCGA+AGG | 0.563162 | 7.1:-82486363 | None:intergenic |
GCTGACATTGTTAGCAGCCT+CGG | 0.566694 | 7.1:-82486380 | None:intergenic |
AGGTCTTCGTTGCTGCCGCT+AGG | 0.568800 | 7.1:+82487178 | MS.gene021879:CDS |
GAATGCAGCTAATCAAGCAT+TGG | 0.570125 | 7.1:+82486285 | MS.gene021879:intron |
ACACTGGCATTCTTTGGAGT+CGG | 0.571412 | 7.1:+82486310 | MS.gene021879:CDS |
ATCGTTATGTTAAGGCGTGT+GGG | 0.575039 | 7.1:+82487133 | MS.gene021879:CDS |
TTTGAAGGTAGTGTGAATCT+CGG | 0.576329 | 7.1:+82488276 | MS.gene021879:CDS |
GCAATTGGGAAGAGTAAAGG+AGG | 0.579422 | 7.1:+82486141 | MS.gene021879:CDS |
TAAGAGCACTTAGCGCTGCA+AGG | 0.584853 | 7.1:-82488203 | None:intergenic |
CACAGAACACGTAGACGACA+AGG | 0.586767 | 7.1:-82488227 | None:intergenic |
GCTCCAAAGGTTGCTAAGGT+AGG | 0.588042 | 7.1:-82486892 | None:intergenic |
AAAACTGCATACATCTTGCT+AGG | 0.589781 | 7.1:+82486168 | MS.gene021879:CDS |
TGGTTGCATTTGGATATGGA+GGG | 0.593151 | 7.1:+82486863 | MS.gene021879:CDS |
TCAAAACACTTACTCGAGAG+AGG | 0.595006 | 7.1:+82486948 | MS.gene021879:CDS |
ACTGCTAAAGGCGAAGAACC+GGG | 0.601970 | 7.1:+82488129 | MS.gene021879:CDS |
GTGATGACAGTCACTGCTAA+AGG | 0.603223 | 7.1:+82488117 | MS.gene021879:CDS |
GAACTTCAAAGAATGGGAGT+TGG | 0.604352 | 7.1:+82487820 | MS.gene021879:CDS |
AGATTCCGGTATGTGGACGT+TGG | 0.605482 | 7.1:+82487044 | MS.gene021879:CDS |
GATAAAGTCCAGTACATACA+AGG | 0.608027 | 7.1:-82487741 | None:intergenic |
CTGCTAACAATGTCAGCAAG+TGG | 0.612210 | 7.1:+82486386 | MS.gene021879:CDS |
TGTATGCAGATGTCACCAGC+AGG | 0.613543 | 7.1:+82485900 | None:intergenic |
CAAGGAGGACCAACTTTACG+AGG | 0.615767 | 7.1:+82487221 | MS.gene021879:CDS |
GTGGAATGTTGAACCTGCCA+AGG | 0.619345 | 7.1:+82487203 | MS.gene021879:CDS |
CTTGTCAGGATTGACAGTGT+AGG | 0.621029 | 7.1:-82485925 | None:intergenic |
AGTTATCGGAATGTTTGCGA+TGG | 0.624323 | 7.1:+82487846 | MS.gene021879:CDS |
CTAAAGGCGAAGAACCGGGA+TGG | 0.629833 | 7.1:+82488133 | MS.gene021879:CDS |
TGACAAGATTGAAGCAGCTG+AGG | 0.632286 | 7.1:+82485941 | MS.gene021879:CDS |
ACATATGTACCTTATATCGT+GGG | 0.636035 | 7.1:-82487292 | None:intergenic |
TTGACAGTGTAGGATCCTGC+TGG | 0.637806 | 7.1:-82485915 | None:intergenic |
GATGGTTGCAGCTGGTGCAA+CGG | 0.642766 | 7.1:+82487864 | MS.gene021879:CDS |
AATCAAGGCTATAATAGCAG+AGG | 0.651729 | 7.1:-82487085 | None:intergenic |
AATTAAGTGGTAATCCTAAG+GGG | 0.654690 | 7.1:+82487791 | MS.gene021879:CDS |
GAATGTTGAACCTGCCAAGG+AGG | 0.661909 | 7.1:+82487206 | MS.gene021879:CDS |
AAACTATGTTAGCAGCATGA+TGG | 0.672075 | 7.1:+82488086 | MS.gene021879:intron |
TCTACGTGTTCTGTGCTCGG+TGG | 0.678153 | 7.1:+82488235 | MS.gene021879:CDS |
TGTGAATCTCGGAAGCCAAG+AGG | 0.678778 | 7.1:+82488287 | MS.gene021879:CDS |
GAGCACTTAGCGCTGCAAGG+AGG | 0.679524 | 7.1:-82488200 | None:intergenic |
TTCAACATTCCACTTCCTAG+CGG | 0.680521 | 7.1:-82487193 | None:intergenic |
CCTTCGCCAAGACAGTGCCG+AGG | 0.682536 | 7.1:+82486363 | MS.gene021879:CDS |
GCACCAACAAGAACATACTG+TGG | 0.687478 | 7.1:-82487955 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAAAAATAAATTAAAAT+AGG | + | chr7.1:82486086-82486105 | MS.gene021879:intron | 0.0% |
!! | AATAATATATAATACATGTT+TGG | + | chr7.1:82486044-82486063 | MS.gene021879:intron | 10.0% |
!! | ATTAATCATGAATTAATAAA+TGG | + | chr7.1:82486682-82486701 | MS.gene021879:intron | 10.0% |
!! | ATTCTATTTGTCAATATATA+TGG | + | chr7.1:82486843-82486862 | MS.gene021879:CDS | 15.0% |
!! | TATATATTGACAAATAGAAT+AGG | - | chr7.1:82486843-82486862 | None:intergenic | 15.0% |
!! | TTAATTGTTCAACAAATATA+AGG | - | chr7.1:82486663-82486682 | None:intergenic | 15.0% |
!! | AAATTAAAATAGGTGATAGA+AGG | + | chr7.1:82486096-82486115 | MS.gene021879:intron | 20.0% |
!! | ATCTTCATAATAAACCAAAA+TGG | - | chr7.1:82487028-82487047 | None:intergenic | 20.0% |
!! | ATGTTTGGTTATATAATGTT+TGG | + | chr7.1:82486059-82486078 | MS.gene021879:intron | 20.0% |
!! | TTGTAATTAAATGAACTAAG+TGG | + | chr7.1:82486249-82486268 | MS.gene021879:intron | 20.0% |
!!! | GAGTTTAAAACTTATATCTT+GGG | - | chr7.1:82487424-82487443 | None:intergenic | 20.0% |
!!! | TGAGTTTAAAACTTATATCT+TGG | - | chr7.1:82487425-82487444 | None:intergenic | 20.0% |
! | AAAATTAAGTGGTAATCCTA+AGG | + | chr7.1:82487789-82487808 | MS.gene021879:CDS | 25.0% |
! | AAATCATGTTAATGGAAAAG+TGG | + | chr7.1:82486119-82486138 | MS.gene021879:CDS | 25.0% |
! | AAATTAAGTGGTAATCCTAA+GGG | + | chr7.1:82487790-82487809 | MS.gene021879:CDS | 25.0% |
! | ATAATAAACCAAAATGGTGT+TGG | - | chr7.1:82487022-82487041 | None:intergenic | 25.0% |
! | ATAGAAGGAAATCATGTTAA+TGG | + | chr7.1:82486111-82486130 | MS.gene021879:CDS | 25.0% |
! | ATTCCTTAGTGATTCTTATT+GGG | + | chr7.1:82486444-82486463 | MS.gene021879:CDS | 25.0% |
! | CAACTCAACATATATATAAC+AGG | - | chr7.1:82487455-82487474 | None:intergenic | 25.0% |
! | TCAATATATATGGTTGCATT+TGG | + | chr7.1:82486853-82486872 | MS.gene021879:CDS | 25.0% |
! | TTGGTTTATTATGAAGATTC+CGG | + | chr7.1:82487030-82487049 | MS.gene021879:CDS | 25.0% |
!!! | GTTTACATTTTTTCACTCTT+GGG | + | chr7.1:82486418-82486437 | MS.gene021879:CDS | 25.0% |
!!! | TGTTTACATTTTTTCACTCT+TGG | + | chr7.1:82486417-82486436 | MS.gene021879:CDS | 25.0% |
AACATATGTACCTTATATCG+TGG | - | chr7.1:82487296-82487315 | None:intergenic | 30.0% | |
AATTAAGTGGTAATCCTAAG+GGG | + | chr7.1:82487791-82487810 | MS.gene021879:CDS | 30.0% | |
ACATATGTACCTTATATCGT+GGG | - | chr7.1:82487295-82487314 | None:intergenic | 30.0% | |
ATAAGCGAACTTCAAAGAAT+GGG | + | chr7.1:82487814-82487833 | MS.gene021879:CDS | 30.0% | |
ATACCGAATAACTTGAATGT+TGG | + | chr7.1:82488156-82488175 | MS.gene021879:CDS | 30.0% | |
ATATATGCATTCATTGATGC+AGG | + | chr7.1:82486714-82486733 | MS.gene021879:intron | 30.0% | |
CATTCCTTAGTGATTCTTAT+TGG | + | chr7.1:82486443-82486462 | MS.gene021879:CDS | 30.0% | |
CTGTTATTGATCAAACCATT+AGG | + | chr7.1:82486766-82486785 | MS.gene021879:CDS | 30.0% | |
GACACTACATATATCAAACA+CGG | - | chr7.1:82487722-82487741 | None:intergenic | 30.0% | |
TACCGAATAACTTGAATGTT+GGG | + | chr7.1:82488157-82488176 | MS.gene021879:CDS | 30.0% | |
TATATGCATTCATTGATGCA+GGG | + | chr7.1:82486715-82486734 | MS.gene021879:intron | 30.0% | |
TATATGGTTGCATTTGGATA+TGG | + | chr7.1:82486859-82486878 | MS.gene021879:CDS | 30.0% | |
TATCATTCTCAACACACATT+TGG | - | chr7.1:82487575-82487594 | None:intergenic | 30.0% | |
TCGAAGATATCGTTATGTTA+AGG | + | chr7.1:82487125-82487144 | MS.gene021879:CDS | 30.0% | |
TTAATGGAAAAGTGGCAATT+GGG | + | chr7.1:82486127-82486146 | MS.gene021879:CDS | 30.0% | |
TTCCTTAGTGATTCTTATTG+GGG | + | chr7.1:82486445-82486464 | MS.gene021879:CDS | 30.0% | |
! | AGGATTACCACTTAATTTTC+CGG | - | chr7.1:82487788-82487807 | None:intergenic | 30.0% |
! | TCAGAAGTTTTTGTGTATGT+GGG | + | chr7.1:82487979-82487998 | MS.gene021879:intron | 30.0% |
! | TTCAGAAGTTTTTGTGTATG+TGG | + | chr7.1:82487978-82487997 | MS.gene021879:intron | 30.0% |
! | TTTTACTTTGCACTCAATGT+TGG | + | chr7.1:82486985-82487004 | MS.gene021879:CDS | 30.0% |
AAAACTGCATACATCTTGCT+AGG | + | chr7.1:82486168-82486187 | MS.gene021879:CDS | 35.0% | |
AAACTATGTTAGCAGCATGA+TGG | + | chr7.1:82488086-82488105 | MS.gene021879:intron | 35.0% | |
AAGGCTAAAACATGTTATGC+CGG | + | chr7.1:82487894-82487913 | MS.gene021879:CDS | 35.0% | |
AATCAAGGCTATAATAGCAG+AGG | - | chr7.1:82487088-82487107 | None:intergenic | 35.0% | |
AATCTTTCTGCTTCCTTTGA+TGG | - | chr7.1:82487265-82487284 | None:intergenic | 35.0% | |
ACATATATCAAACACGGACA+TGG | - | chr7.1:82487716-82487735 | None:intergenic | 35.0% | |
ACCTGAATTACTCTTATGAC+AGG | - | chr7.1:82487162-82487181 | None:intergenic | 35.0% | |
AGGCGATGTAATGAACAATA+AGG | + | chr7.1:82487663-82487682 | MS.gene021879:intron | 35.0% | |
ATCAAATTGATCAGCTCCAA+AGG | - | chr7.1:82486908-82486927 | None:intergenic | 35.0% | |
ATTATGAAGATTCCGGTATG+TGG | + | chr7.1:82487037-82487056 | MS.gene021879:CDS | 35.0% | |
ATTCATTGATGCAGGGTTTA+GGG | + | chr7.1:82486722-82486741 | MS.gene021879:intron | 35.0% | |
ATTCCACAGTATGTTCTTGT+TGG | + | chr7.1:82487952-82487971 | MS.gene021879:CDS | 35.0% | |
CTCTGTTGTATTCACACAAA+TGG | + | chr7.1:82487621-82487640 | MS.gene021879:intron | 35.0% | |
GATAAAGTCCAGTACATACA+AGG | - | chr7.1:82487744-82487763 | None:intergenic | 35.0% | |
GATAAGCGAACTTCAAAGAA+TGG | + | chr7.1:82487813-82487832 | MS.gene021879:CDS | 35.0% | |
GATGTAATGAACAATAAGGC+AGG | + | chr7.1:82487667-82487686 | MS.gene021879:intron | 35.0% | |
GTTAATGGAAAAGTGGCAAT+TGG | + | chr7.1:82486126-82486145 | MS.gene021879:CDS | 35.0% | |
TCCTGCTAAGAATGAAATCA+AGG | - | chr7.1:82487103-82487122 | None:intergenic | 35.0% | |
TCCTGTCATAAGAGTAATTC+AGG | + | chr7.1:82487158-82487177 | MS.gene021879:CDS | 35.0% | |
TCCTTCACTTAGTTCGAAAA+TGG | - | chr7.1:82486007-82486026 | None:intergenic | 35.0% | |
TGTATGGCTTCAATTTCTCT+TGG | + | chr7.1:82488063-82488082 | MS.gene021879:intron | 35.0% | |
TGTTGAGAATGATACCAGTT+TGG | + | chr7.1:82487581-82487600 | MS.gene021879:intron | 35.0% | |
TTCCCCAATAAGAATCACTA+AGG | - | chr7.1:82486450-82486469 | None:intergenic | 35.0% | |
TTTGAAGGTAGTGTGAATCT+CGG | + | chr7.1:82488276-82488295 | MS.gene021879:CDS | 35.0% | |
! | ACTCTTTTCCAACACCATTT+TGG | + | chr7.1:82487011-82487030 | MS.gene021879:CDS | 35.0% |
! | CTTTGGAAGTTCACTTTGTA+TGG | + | chr7.1:82488047-82488066 | MS.gene021879:intron | 35.0% |
! | TGCCCAACATTCAAGTTATT+CGG | - | chr7.1:82488162-82488181 | None:intergenic | 35.0% |
! | TTGATCAAACCATTAGGTTG+CGG | + | chr7.1:82486772-82486791 | MS.gene021879:CDS | 35.0% |
! | TTGTACTGTAACTCAAGTTG+AGG | + | chr7.1:82487546-82487565 | MS.gene021879:intron | 35.0% |
AAGTTATTCGGTATCCATCC+CGG | - | chr7.1:82488150-82488169 | None:intergenic | 40.0% | |
AGGCTAAAACATGTTATGCC+GGG | + | chr7.1:82487895-82487914 | MS.gene021879:CDS | 40.0% | |
AGTTATCGGAATGTTTGCGA+TGG | + | chr7.1:82487846-82487865 | MS.gene021879:CDS | 40.0% | |
ATAATAGTGCACAGCCAAAC+TGG | - | chr7.1:82487598-82487617 | None:intergenic | 40.0% | |
ATCGTTATGTTAAGGCGTGT+GGG | + | chr7.1:82487133-82487152 | MS.gene021879:CDS | 40.0% | |
ATGGTTGCATTTGGATATGG+AGG | + | chr7.1:82486862-82486881 | MS.gene021879:CDS | 40.0% | |
CAACATGGACATTGAAAGAC+GGG | + | chr7.1:82487497-82487516 | MS.gene021879:intron | 40.0% | |
CATTCATTGATGCAGGGTTT+AGG | + | chr7.1:82486721-82486740 | MS.gene021879:intron | 40.0% | |
CCTGATGGCATAAAAAGCTT+TGG | + | chr7.1:82488030-82488049 | MS.gene021879:intron | 40.0% | |
CTTTCAGCTCTTCTTTGTTC+TGG | + | chr7.1:82486489-82486508 | MS.gene021879:CDS | 40.0% | |
GAACTTCAAAGAATGGGAGT+TGG | + | chr7.1:82487820-82487839 | MS.gene021879:CDS | 40.0% | |
GAATGCAGCTAATCAAGCAT+TGG | + | chr7.1:82486285-82486304 | MS.gene021879:intron | 40.0% | |
GCAACATGGACATTGAAAGA+CGG | + | chr7.1:82487496-82487515 | MS.gene021879:intron | 40.0% | |
GCCTTGATTTCATTCTTAGC+AGG | + | chr7.1:82487099-82487118 | MS.gene021879:CDS | 40.0% | |
TAACTTGAATGTTGGGCACA+TGG | + | chr7.1:82488164-82488183 | MS.gene021879:CDS | 40.0% | |
TATCGTTATGTTAAGGCGTG+TGG | + | chr7.1:82487132-82487151 | MS.gene021879:CDS | 40.0% | |
TCAAAACACTTACTCGAGAG+AGG | + | chr7.1:82486948-82486967 | MS.gene021879:CDS | 40.0% | |
TCGCAAACATTCCGATAACT+AGG | - | chr7.1:82487846-82487865 | None:intergenic | 40.0% | |
TGGTTGCATTTGGATATGGA+GGG | + | chr7.1:82486863-82486882 | MS.gene021879:CDS | 40.0% | |
TGTAGTGTCCTTGTATGTAC+TGG | + | chr7.1:82487733-82487752 | MS.gene021879:intron | 40.0% | |
TGTTCATTACCGCAACCTAA+TGG | - | chr7.1:82486784-82486803 | None:intergenic | 40.0% | |
TTCAACATTCCACTTCCTAG+CGG | - | chr7.1:82487196-82487215 | None:intergenic | 40.0% | |
TTGAAAGACGGGAATGAATC+CGG | + | chr7.1:82487508-82487527 | MS.gene021879:intron | 40.0% | |
! | CCAAAGCTTTTTATGCCATC+AGG | - | chr7.1:82488033-82488052 | None:intergenic | 40.0% |
! | GCTTCTCTTTTTGTCGAACA+AGG | + | chr7.1:82487643-82487662 | MS.gene021879:intron | 40.0% |
! | GGCTTTTGTCTTTGACATCA+TGG | + | chr7.1:82486743-82486762 | MS.gene021879:CDS | 40.0% |
! | TTTTGTGTATGTGGGTCAGT+TGG | + | chr7.1:82487987-82488006 | MS.gene021879:intron | 40.0% |
!! | AAGGGCGTCAATAACTTTGA+AGG | + | chr7.1:82488261-82488280 | MS.gene021879:CDS | 40.0% |
!! | GCCATTTTCGAACTAAGTGA+AGG | + | chr7.1:82486003-82486022 | MS.gene021879:intron | 40.0% |
!! | TAATCAAGCATTGGCAACAC+TGG | + | chr7.1:82486294-82486313 | MS.gene021879:CDS | 40.0% |
!! | TGTTGAGTTGAGCAGATTCA+TGG | + | chr7.1:82487465-82487484 | MS.gene021879:intron | 40.0% |
AACAATGTCAGCAAGTGGAC+TGG | + | chr7.1:82486391-82486410 | MS.gene021879:CDS | 45.0% | |
ATCAGCTCCAAAGGTTGCTA+AGG | - | chr7.1:82486899-82486918 | None:intergenic | 45.0% | |
CAACCTACCTTAGCAACCTT+TGG | + | chr7.1:82486889-82486908 | MS.gene021879:CDS | 45.0% | |
CTGCTAACAATGTCAGCAAG+TGG | + | chr7.1:82486386-82486405 | MS.gene021879:CDS | 45.0% | |
CTTGTCAGGATTGACAGTGT+AGG | - | chr7.1:82485928-82485947 | None:intergenic | 45.0% | |
CTTTCTGCTTCCTTTGATGG+CGG | - | chr7.1:82487262-82487281 | None:intergenic | 45.0% | |
GACCAACTTTACGAGGTTGA+CGG | + | chr7.1:82487228-82487247 | MS.gene021879:CDS | 45.0% | |
GCAATTGGGAAGAGTAAAGG+AGG | + | chr7.1:82486141-82486160 | MS.gene021879:CDS | 45.0% | |
GCACCAACAAGAACATACTG+TGG | - | chr7.1:82487958-82487977 | None:intergenic | 45.0% | |
GGTCAGTTGGAGTTCTTCAA+TGG | + | chr7.1:82488000-82488019 | MS.gene021879:intron | 45.0% | |
GTGATGACAGTCACTGCTAA+AGG | + | chr7.1:82488117-82488136 | MS.gene021879:CDS | 45.0% | |
GTGGCAATTGGGAAGAGTAA+AGG | + | chr7.1:82486138-82486157 | MS.gene021879:CDS | 45.0% | |
GTTGAGCAGATTCATGGACA+AGG | + | chr7.1:82487471-82487490 | MS.gene021879:intron | 45.0% | |
TCAGCTGCTTCAATCTTGTC+AGG | - | chr7.1:82485942-82485961 | None:intergenic | 45.0% | |
TCGTCAAGTTCTTGTTCCCT+TGG | + | chr7.1:82487762-82487781 | MS.gene021879:CDS | 45.0% | |
TGAAAGACGGGAATGAATCC+GGG | + | chr7.1:82487509-82487528 | MS.gene021879:intron | 45.0% | |
TGAAGTTCGCTTATCCCCTT+AGG | - | chr7.1:82487808-82487827 | None:intergenic | 45.0% | |
TGAATGTTGGGCACATGGAT+TGG | + | chr7.1:82488169-82488188 | MS.gene021879:CDS | 45.0% | |
TGACAAGATTGAAGCAGCTG+AGG | + | chr7.1:82485941-82485960 | MS.gene021879:CDS | 45.0% | |
TGCAACGAACCAACTTCGTT+GGG | + | chr7.1:82486811-82486830 | MS.gene021879:CDS | 45.0% | |
TTACAGTACAAAGCCGCCAT+TGG | - | chr7.1:82487537-82487556 | None:intergenic | 45.0% | |
TTCAATGGTCAAGCTCCTGA+TGG | + | chr7.1:82488015-82488034 | MS.gene021879:intron | 45.0% | |
TTCTGCACTCCCACGATATA+AGG | + | chr7.1:82487283-82487302 | MS.gene021879:CDS | 45.0% | |
TTGCAACGAACCAACTTCGT+TGG | + | chr7.1:82486810-82486829 | MS.gene021879:CDS | 45.0% | |
TTGGCAACACTGGCATTCTT+TGG | + | chr7.1:82486304-82486323 | MS.gene021879:CDS | 45.0% | |
TTGGGAAGAGTAAAGGAGGA+TGG | + | chr7.1:82486145-82486164 | MS.gene021879:CDS | 45.0% | |
! | ACCACTTAATTTTCCGGCCA+AGG | - | chr7.1:82487782-82487801 | None:intergenic | 45.0% |
! | ATGGGAGTTGGCCTAGTTAT+CGG | + | chr7.1:82487832-82487851 | MS.gene021879:CDS | 45.0% |
! | CCACTTAATTTTCCGGCCAA+GGG | - | chr7.1:82487781-82487800 | None:intergenic | 45.0% |
!! | AAAGAACTAGCCTTCTCTCC+CGG | - | chr7.1:82487916-82487935 | None:intergenic | 45.0% |
!! | ACACTGGCATTCTTTGGAGT+CGG | + | chr7.1:82486310-82486329 | MS.gene021879:CDS | 45.0% |
!! | CGAAGTTGGTTCGTTGCAAA+CGG | - | chr7.1:82486809-82486828 | None:intergenic | 45.0% |
!! | TTCCTTTGATGGCGGATTCA+TGG | - | chr7.1:82487254-82487273 | None:intergenic | 45.0% |
!! | TTATTATAATTATATATACA+TGG | + | chr7.1:82486223-82486242 | MS.gene021879:intron | 5.0% |
ACATGTTATGCCGGGAGAGA+AGG | + | chr7.1:82487903-82487922 | MS.gene021879:CDS | 50.0% | |
ACTGCTAAAGGCGAAGAACC+GGG | + | chr7.1:82488129-82488148 | MS.gene021879:CDS | 50.0% | |
AGATTCCGGTATGTGGACGT+TGG | + | chr7.1:82487044-82487063 | MS.gene021879:CDS | 50.0% | |
ATGAATCCGGGAACCAATGG+CGG | + | chr7.1:82487521-82487540 | MS.gene021879:intron | 50.0% | |
ATGTTTGCGATGGTTGCAGC+TGG | + | chr7.1:82487856-82487875 | MS.gene021879:CDS | 50.0% | |
CAAGGAGGACCAACTTTACG+AGG | + | chr7.1:82487221-82487240 | MS.gene021879:CDS | 50.0% | |
CAAGTTCTTGTTCCCTTGGC+CGG | + | chr7.1:82487766-82487785 | MS.gene021879:CDS | 50.0% | |
CAATCGCTTCATCGTCCTCT+TGG | - | chr7.1:82488305-82488324 | None:intergenic | 50.0% | |
CACAGAACACGTAGACGACA+AGG | - | chr7.1:82488230-82488249 | None:intergenic | 50.0% | |
CACTGCTAAAGGCGAAGAAC+CGG | + | chr7.1:82488128-82488147 | MS.gene021879:CDS | 50.0% | |
CCCTTGGCCGGAAAATTAAG+TGG | + | chr7.1:82487778-82487797 | MS.gene021879:CDS | 50.0% | |
CTGGTGCAACGGAGTTTGTA+AGG | + | chr7.1:82487875-82487894 | MS.gene021879:CDS | 50.0% | |
CTTGGCGAAGGACTCTTGTT+AGG | - | chr7.1:82486354-82486373 | None:intergenic | 50.0% | |
GAAACCCAACGTCCACATAC+CGG | - | chr7.1:82487052-82487071 | None:intergenic | 50.0% | |
GAACCAACTTCGTTGGGAAC+AGG | + | chr7.1:82486817-82486836 | MS.gene021879:CDS | 50.0% | |
GAATGTTGAACCTGCCAAGG+AGG | + | chr7.1:82487206-82487225 | MS.gene021879:CDS | 50.0% | |
GATTCCGGTATGTGGACGTT+GGG | + | chr7.1:82487045-82487064 | MS.gene021879:CDS | 50.0% | |
GCTCCAAAGGTTGCTAAGGT+AGG | - | chr7.1:82486895-82486914 | None:intergenic | 50.0% | |
GCTGACATTGTTAGCAGCCT+CGG | - | chr7.1:82486383-82486402 | None:intergenic | 50.0% | |
GGAATGAATCCGGGAACCAA+TGG | + | chr7.1:82487518-82487537 | MS.gene021879:intron | 50.0% | |
GGTATGTGGACGTTGGGTTT+CGG | + | chr7.1:82487051-82487070 | MS.gene021879:CDS | 50.0% | |
GTGGAATGTTGAACCTGCCA+AGG | + | chr7.1:82487203-82487222 | MS.gene021879:CDS | 50.0% | |
TCATGGACAAGGCAGCAACA+TGG | + | chr7.1:82487482-82487501 | MS.gene021879:intron | 50.0% | |
TCGTCTACGTGTTCTGTGCT+CGG | + | chr7.1:82488232-82488251 | MS.gene021879:CDS | 50.0% | |
TGTGAATCTCGGAAGCCAAG+AGG | + | chr7.1:82488287-82488306 | MS.gene021879:CDS | 50.0% | |
TTGACAGTGTAGGATCCTGC+TGG | - | chr7.1:82485918-82485937 | None:intergenic | 50.0% | |
! | CTCGTAAAGTTGGTCCTCCT+TGG | - | chr7.1:82487223-82487242 | None:intergenic | 50.0% |
! | TAAAGTTGGTCCTCCTTGGC+AGG | - | chr7.1:82487219-82487238 | None:intergenic | 50.0% |
! | TTCTGTGCTCGGTGGTACAA+GGG | + | chr7.1:82488243-82488262 | MS.gene021879:CDS | 50.0% |
!! | CTTTGGAGTCGGAGTGAACT+TGG | + | chr7.1:82486321-82486340 | MS.gene021879:CDS | 50.0% |
!! | TAAGAGCACTTAGCGCTGCA+AGG | - | chr7.1:82488206-82488225 | None:intergenic | 50.0% |
AACACGGACATGGTTGCTGC+TGG | - | chr7.1:82487706-82487725 | None:intergenic | 55.0% | |
ACACGGACATGGTTGCTGCT+GGG | - | chr7.1:82487705-82487724 | None:intergenic | 55.0% | |
AGGCCTGTTCCCAACGAAGT+TGG | - | chr7.1:82486823-82486842 | None:intergenic | 55.0% | |
CTAAAGGCGAAGAACCGGGA+TGG | + | chr7.1:82488133-82488152 | MS.gene021879:CDS | 55.0% | |
GATGGTTGCAGCTGGTGCAA+CGG | + | chr7.1:82487864-82487883 | MS.gene021879:CDS | 55.0% | |
GGCCATGAATCCGCCATCAA+AGG | + | chr7.1:82487249-82487268 | MS.gene021879:CDS | 55.0% | |
GGCCGTCAACCTCGTAAAGT+TGG | - | chr7.1:82487233-82487252 | None:intergenic | 55.0% | |
TCTACGTGTTCTGTGCTCGG+TGG | + | chr7.1:82488235-82488254 | MS.gene021879:CDS | 55.0% | |
! | GTTCTGTGCTCGGTGGTACA+AGG | + | chr7.1:82488242-82488261 | MS.gene021879:CDS | 55.0% |
!! | ACAAAGCCGCCATTGGTTCC+CGG | - | chr7.1:82487530-82487549 | None:intergenic | 55.0% |
AGGTCTTCGTTGCTGCCGCT+AGG | + | chr7.1:82487178-82487197 | MS.gene021879:CDS | 60.0% | |
GAGCACTTAGCGCTGCAAGG+AGG | - | chr7.1:82488203-82488222 | None:intergenic | 60.0% | |
TAGCAGCCTCGGCACTGTCT+TGG | - | chr7.1:82486372-82486391 | None:intergenic | 60.0% | |
TCGTTGCTGCCGCTAGGAAG+TGG | + | chr7.1:82487184-82487203 | MS.gene021879:CDS | 60.0% | |
CCTCGGCACTGTCTTGGCGA+AGG | - | chr7.1:82486366-82486385 | None:intergenic | 65.0% | |
CCTTCGCCAAGACAGTGCCG+AGG | + | chr7.1:82486363-82486382 | MS.gene021879:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 82485909 | 82488335 | 82485909 | ID=MS.gene021879 |
chr7.1 | mRNA | 82485909 | 82488335 | 82485909 | ID=MS.gene021879.t1;Parent=MS.gene021879 |
chr7.1 | exon | 82485909 | 82485962 | 82485909 | ID=MS.gene021879.t1.exon1;Parent=MS.gene021879.t1 |
chr7.1 | CDS | 82485909 | 82485962 | 82485909 | ID=cds.MS.gene021879.t1;Parent=MS.gene021879.t1 |
chr7.1 | exon | 82486108 | 82486189 | 82486108 | ID=MS.gene021879.t1.exon2;Parent=MS.gene021879.t1 |
chr7.1 | CDS | 82486108 | 82486189 | 82486108 | ID=cds.MS.gene021879.t1;Parent=MS.gene021879.t1 |
chr7.1 | exon | 82486293 | 82486510 | 82486293 | ID=MS.gene021879.t1.exon3;Parent=MS.gene021879.t1 |
chr7.1 | CDS | 82486293 | 82486510 | 82486293 | ID=cds.MS.gene021879.t1;Parent=MS.gene021879.t1 |
chr7.1 | exon | 82486736 | 82487304 | 82486736 | ID=MS.gene021879.t1.exon4;Parent=MS.gene021879.t1 |
chr7.1 | CDS | 82486736 | 82487304 | 82486736 | ID=cds.MS.gene021879.t1;Parent=MS.gene021879.t1 |
chr7.1 | exon | 82487738 | 82487992 | 82487738 | ID=MS.gene021879.t1.exon5;Parent=MS.gene021879.t1 |
chr7.1 | CDS | 82487738 | 82487992 | 82487738 | ID=cds.MS.gene021879.t1;Parent=MS.gene021879.t1 |
chr7.1 | exon | 82488101 | 82488335 | 82488101 | ID=MS.gene021879.t1.exon6;Parent=MS.gene021879.t1 |
chr7.1 | CDS | 82488101 | 82488335 | 82488101 | ID=cds.MS.gene021879.t1;Parent=MS.gene021879.t1 |
Gene Sequence |
Protein sequence |