AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51033


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51033.t1 MTR_4g107530 99.337 603 4 0 1 603 3 605 0.0 1231
MS.gene51033.t1 MTR_4g107510 68.512 578 180 2 5 581 10 586 0.0 835
MS.gene51033.t1 MTR_4g107580 65.719 598 195 4 14 602 5 601 0.0 817
MS.gene51033.t1 MTR_5g038060 45.377 584 307 5 1 579 1 577 2.21e-177 516
MS.gene51033.t1 MTR_8g469480 46.842 570 287 6 33 593 40 602 2.83e-175 510
MS.gene51033.t1 MTR_4g107610 41.107 596 323 9 1 587 6 582 7.14e-156 461
MS.gene51033.t1 MTR_5g038190 38.908 568 335 6 17 579 8 568 4.01e-146 435
MS.gene51033.t1 MTR_8g469470 38.927 578 335 7 12 581 16 583 6.73e-146 434
MS.gene51033.t1 MTR_7g064780 37.333 600 340 10 18 598 1 583 1.42e-135 408
MS.gene51033.t1 MTR_7g064800 38.989 554 322 5 34 580 29 573 2.24e-132 400
MS.gene51033.t1 MTR_8g103233 38.291 585 344 10 14 596 2 571 8.25e-131 395
MS.gene51033.t1 MTR_7g088825 37.265 585 333 13 6 582 10 568 4.28e-126 384
MS.gene51033.t1 MTR_5g055000 36.014 572 345 9 34 600 21 576 6.81e-125 380
MS.gene51033.t1 MTR_3g462710 37.091 550 331 7 35 581 28 565 3.94e-124 378
MS.gene51033.t1 MTR_7g088790 36.645 614 354 10 6 599 10 608 6.44e-124 379
MS.gene51033.t1 MTR_2g101640 35.121 578 363 9 28 603 20 587 3.08e-123 378
MS.gene51033.t1 MTR_2g101650 36.063 574 357 8 26 597 19 584 1.09e-122 375
MS.gene51033.t1 MTR_7g067010 36.679 548 332 7 35 580 28 562 8.74e-122 372
MS.gene51033.t1 MTR_4g015080 35.456 581 350 10 12 583 11 575 2.05e-120 369
MS.gene51033.t1 MTR_7g088820 34.864 588 360 12 12 590 5 578 6.05e-116 358
MS.gene51033.t1 MTR_4g011280 35.053 562 353 9 31 590 32 583 1.46e-115 357
MS.gene51033.t1 MTR_5g012270 34.418 584 358 10 9 582 7 575 2.14e-114 353
MS.gene51033.t1 MTR_2g101610 36.269 579 349 11 28 603 24 585 1.98e-113 352
MS.gene51033.t1 MTR_1g009200 34.826 603 363 12 2 599 7 584 5.45e-113 350
MS.gene51033.t1 MTR_2g101590 36.379 580 347 11 28 603 23 584 1.62e-112 350
MS.gene51033.t1 MTR_3g112460 34.423 581 341 11 13 581 2 554 5.90e-112 347
MS.gene51033.t1 MTR_3g112470 34.007 594 349 13 13 591 2 567 2.03e-110 342
MS.gene51033.t1 MTR_1g026740 34.386 570 355 11 8 576 2 553 8.77e-110 341
MS.gene51033.t1 MTR_5g014150 32.437 595 382 9 11 600 23 602 3.45e-109 340
MS.gene51033.t1 MTR_1g057460 35.097 567 339 10 12 576 25 564 7.85e-109 338
MS.gene51033.t1 MTR_3g112450 33.895 593 347 12 16 591 5 569 3.81e-108 337
MS.gene51033.t1 MTR_1g026770 34.918 547 338 12 34 576 18 550 1.56e-106 332
MS.gene51033.t1 MTR_2g101560 36.097 579 349 12 28 603 24 584 2.92e-106 334
MS.gene51033.t1 MTR_7g098200 33.454 553 342 6 31 580 29 558 7.15e-106 332
MS.gene51033.t1 MTR_7g098200 33.153 555 351 6 31 580 29 568 7.20e-106 332
MS.gene51033.t1 MTR_4g019580 33.898 590 361 11 6 586 7 576 1.03e-105 331
MS.gene51033.t1 MTR_3g462710 37.821 468 276 7 117 581 1 456 3.94e-105 325
MS.gene51033.t1 MTR_5g012290 31.040 596 384 10 5 591 7 584 2.56e-104 327
MS.gene51033.t1 MTR_1g026750 34.039 567 358 11 25 585 8 564 8.20e-104 325
MS.gene51033.t1 MTR_7g088820 35.104 527 320 11 72 590 4 516 1.44e-103 323
MS.gene51033.t1 MTR_7g065080 33.164 591 353 12 11 589 8 568 1.75e-103 325
MS.gene51033.t1 MTR_7g098160 32.929 577 348 9 35 595 37 590 6.22e-103 324
MS.gene51033.t1 MTR_7g006540 35.043 585 344 12 34 600 66 632 1.78e-102 324
MS.gene51033.t1 MTR_2g093640 34.790 572 339 10 14 580 6 548 2.03e-102 321
MS.gene51033.t1 MTR_1g057460 35.577 520 306 10 59 576 1 493 4.49e-101 316
MS.gene51033.t1 MTR_7g098090 33.101 574 356 10 35 595 37 595 4.61e-101 320
MS.gene51033.t1 MTR_4g101380 33.052 593 377 9 5 590 7 586 1.38e-100 318
MS.gene51033.t1 MTR_3g069420 34.375 576 353 10 34 602 37 594 3.63e-100 317
MS.gene51033.t1 MTR_3g069500 32.998 597 365 9 1 589 1 570 4.35e-100 316
MS.gene51033.t1 MTR_1g075440 33.159 573 365 7 34 602 31 589 5.40e-100 316
MS.gene51033.t1 MTR_3g014790 34.211 570 330 7 33 587 19 558 2.31e-99 313
MS.gene51033.t1 MTR_3g069440 33.274 559 352 9 35 589 37 578 1.45e-98 312
MS.gene51033.t1 MTR_0236s0050 35.192 520 308 10 59 576 1 493 6.75e-98 308
MS.gene51033.t1 MTR_7g098040 31.597 576 371 10 35 603 38 597 8.32e-98 311
MS.gene51033.t1 MTR_4g098800 31.993 572 371 7 11 577 15 573 1.15e-97 310
MS.gene51033.t1 MTR_7g010820 32.538 587 385 7 14 595 7 587 1.29e-97 310
MS.gene51033.t1 MTR_7g005930 31.185 574 373 8 6 577 14 567 1.75e-97 309
MS.gene51033.t1 MTR_7g098220 32.162 569 366 6 35 598 34 587 2.69e-97 309
MS.gene51033.t1 MTR_4g098800 31.993 572 371 7 11 577 80 638 7.66e-97 310
MS.gene51033.t1 MTR_2g093160 33.636 550 337 7 34 580 24 548 6.43e-96 304
MS.gene51033.t1 MTR_5g085850 31.926 592 375 8 5 594 6 571 1.43e-95 305
MS.gene51033.t1 MTR_1g116930 32.118 576 361 10 34 598 26 582 1.85e-95 304
MS.gene51033.t1 MTR_3g005010 33.810 559 317 11 34 583 33 547 2.82e-95 302
MS.gene51033.t1 MTR_7g098230 32.000 550 346 7 40 580 35 565 4.23e-95 303
MS.gene51033.t1 MTR_4g114340 33.755 554 348 8 34 584 27 564 6.17e-95 303
MS.gene51033.t1 MTR_7g065080 34.252 508 297 10 90 589 3 481 5.37e-94 298
MS.gene51033.t1 MTR_8g038880 32.815 579 341 9 34 601 23 564 9.90e-94 299
MS.gene51033.t1 MTR_1g042310 33.393 560 353 9 34 588 29 573 1.04e-93 300
MS.gene51033.t1 MTR_0294s0020 34.021 582 338 13 11 580 3 550 2.50e-93 298
MS.gene51033.t1 MTR_7g098180 30.473 571 376 6 35 599 35 590 4.17e-93 298
MS.gene51033.t1 MTR_4g033325 34.648 583 333 12 11 580 3 550 2.09e-92 295
MS.gene51033.t1 MTR_7g098220 31.720 558 361 6 46 598 1 543 2.86e-92 295
MS.gene51033.t1 MTR_7g088820 35.062 482 291 11 117 590 1 468 7.48e-92 291
MS.gene51033.t1 MTR_7g013270 31.306 559 364 8 34 588 93 635 1.28e-91 296
MS.gene51033.t1 MTR_1g042310 33.455 547 344 9 47 588 5 536 6.53e-91 291
MS.gene51033.t1 MTR_3g072300 33.333 558 350 11 35 587 28 568 1.14e-90 291
MS.gene51033.t1 MTR_4g033315 33.759 548 331 9 35 580 35 552 4.26e-89 286
MS.gene51033.t1 MTR_4g033310 33.759 548 331 9 35 580 35 552 4.26e-89 286
MS.gene51033.t1 MTR_1g042310 33.519 540 339 9 54 588 5 529 5.45e-89 286
MS.gene51033.t1 MTR_2g093180 33.574 554 333 9 34 580 24 549 6.35e-89 286
MS.gene51033.t1 MTR_1g041835 31.979 566 350 6 35 588 31 573 1.68e-88 286
MS.gene51033.t1 MTR_1g041815 32.414 580 354 7 35 602 31 584 6.04e-88 285
MS.gene51033.t1 MTR_7g098200 33.049 469 294 6 117 580 1 454 7.45e-87 279
MS.gene51033.t1 MTR_1g041875 31.784 538 326 6 34 559 32 540 9.03e-87 281
MS.gene51033.t1 MTR_7g111260 32.586 580 354 12 11 585 6 553 2.50e-86 280
MS.gene51033.t1 MTR_4g033330 32.264 561 344 10 6 561 4 533 9.81e-86 277
MS.gene51033.t1 MTR_1g085090 31.957 557 348 11 34 585 22 552 1.97e-84 276
MS.gene51033.t1 MTR_1g041885 33.137 510 316 6 54 559 5 493 3.17e-84 273
MS.gene51033.t1 MTR_2g005130 29.816 597 368 14 4 581 1 565 3.90e-84 275
MS.gene51033.t1 MTR_3g100980 31.359 574 352 12 28 586 11 557 4.00e-83 271
MS.gene51033.t1 MTR_4g033325 35.811 444 259 8 140 580 6 426 1.18e-77 253
MS.gene51033.t1 MTR_4g033325 35.811 444 259 8 140 580 32 452 1.47e-77 253
MS.gene51033.t1 MTR_4g033375 33.988 509 294 12 26 522 18 496 2.35e-77 254
MS.gene51033.t1 MTR_3g100980 29.900 602 352 13 28 586 11 585 3.27e-77 256
MS.gene51033.t1 MTR_2g017750 29.196 572 385 8 26 579 19 588 1.81e-76 254
MS.gene51033.t1 MTR_4g107670 29.655 580 357 8 29 583 22 575 1.88e-76 254
MS.gene51033.t1 MTR_4g033395 33.399 509 297 11 26 522 18 496 2.81e-76 251
MS.gene51033.t1 MTR_8g469310 30.351 570 375 7 30 583 12 575 6.67e-75 250
MS.gene51033.t1 MTR_4g123537 29.784 601 384 14 9 600 21 592 3.62e-74 249
MS.gene51033.t1 MTR_4g033385 34.793 434 264 7 149 580 37 453 7.64e-74 244
MS.gene51033.t1 MTR_7g098150 33.175 422 265 5 35 451 37 446 5.96e-71 237
MS.gene51033.t1 MTR_5g038380 28.147 572 353 8 40 583 37 578 7.57e-71 239
MS.gene51033.t1 MTR_8g087780 29.609 537 368 8 13 542 3 536 7.45e-66 226
MS.gene51033.t1 MTR_8g087810 29.167 576 396 10 13 579 3 575 1.16e-65 225
MS.gene51033.t1 MTR_6g008690 30.396 556 331 15 48 585 24 541 7.04e-65 222
MS.gene51033.t1 MTR_1g009170 33.007 409 215 11 155 559 5 358 3.45e-63 213
MS.gene51033.t1 MTR_7g098210 27.083 528 295 11 54 580 5 443 5.93e-54 190
MS.gene51033.t1 MTR_4g024930 26.990 578 375 14 11 577 12 553 1.60e-52 189
MS.gene51033.t1 MTR_4g033310 36.299 281 167 4 300 580 220 488 2.05e-46 171
MS.gene51033.t1 MTR_4g033310 34.706 170 99 2 35 204 35 192 1.92e-19 92.0
MS.gene51033.t1 MTR_7g051880 28.150 508 310 13 74 576 68 525 3.90e-42 159
MS.gene51033.t1 MTR_7g052600 27.559 508 313 12 74 576 68 525 1.18e-41 158
MS.gene51033.t1 MTR_7g051830 27.038 503 322 8 74 576 68 525 7.84e-40 153
MS.gene51033.t1 MTR_8g091265 38.655 119 69 4 302 418 3 119 7.32e-19 84.0
MS.gene51033.t1 MTR_3g065350 30.952 168 105 2 343 510 1 157 7.60e-19 84.3
MS.gene51033.t1 MTR_7g064160 34.545 110 60 2 18 115 4 113 4.53e-16 75.1
MS.gene51033.t1 MTR_4g033390 35.632 87 56 0 494 580 30 116 5.90e-12 63.5
MS.gene51033.t1 MTR_2g093650 39.216 102 59 2 350 451 33 131 3.27e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51033.t1 AT5G62680 59.278 582 233 3 21 598 33 614 0.0 721
MS.gene51033.t1 AT1G18880 57.338 586 245 3 14 597 2 584 0.0 704
MS.gene51033.t1 AT3G47960 59.712 556 221 2 25 579 55 608 0.0 681
MS.gene51033.t1 AT1G69870 46.575 584 293 6 26 597 44 620 4.01e-180 523
MS.gene51033.t1 AT1G27080 44.464 560 281 8 28 579 11 548 1.38e-158 467
MS.gene51033.t1 AT5G28470 41.547 556 301 9 34 583 20 557 9.97e-148 438
MS.gene51033.t1 AT1G27080 44.318 528 264 8 60 579 1 506 3.25e-146 434
MS.gene51033.t1 AT5G28470 41.367 556 300 10 34 583 20 555 1.07e-144 431
MS.gene51033.t1 AT1G69860 39.350 554 311 6 34 583 21 553 6.69e-131 395
MS.gene51033.t1 AT1G52190 35.902 571 350 9 11 576 7 566 2.95e-130 395
MS.gene51033.t1 AT3G16180 35.979 567 354 8 34 597 26 586 1.21e-125 382
MS.gene51033.t1 AT1G68570 36.455 598 358 9 11 603 3 583 1.43e-124 380
MS.gene51033.t1 AT1G62200 37.282 574 335 7 2 571 27 579 8.52e-122 373
MS.gene51033.t1 AT3G54140 36.794 549 332 9 35 580 28 564 2.13e-121 371
MS.gene51033.t1 AT3G54140 36.794 549 332 9 35 580 28 564 2.13e-121 371
MS.gene51033.t1 AT1G68570 37.102 566 334 9 43 603 5 553 3.23e-121 370
MS.gene51033.t1 AT2G02040 36.552 580 348 10 13 585 19 585 7.25e-121 370
MS.gene51033.t1 AT5G01180 36.577 555 336 7 35 586 29 570 3.09e-120 368
MS.gene51033.t1 AT5G01180 36.577 555 336 7 35 586 29 570 3.09e-120 368
MS.gene51033.t1 AT5G01180 36.577 555 336 7 35 586 29 570 3.09e-120 368
MS.gene51033.t1 AT1G62200 36.379 602 331 9 2 571 27 608 1.57e-118 365
MS.gene51033.t1 AT1G62200 36.379 602 331 9 2 571 41 622 2.28e-118 365
MS.gene51033.t1 AT3G45650 36.057 563 333 9 23 585 14 549 8.51e-115 353
MS.gene51033.t1 AT3G45660 35.616 584 343 10 6 589 2 552 2.67e-112 347
MS.gene51033.t1 AT3G45660 35.616 584 343 10 6 589 2 552 2.67e-112 347
MS.gene51033.t1 AT2G02020 36.731 569 307 8 8 571 15 535 5.44e-112 346
MS.gene51033.t1 AT3G45660 35.616 584 343 10 6 589 23 573 6.31e-112 347
MS.gene51033.t1 AT3G45680 36.192 583 326 12 23 599 14 556 3.75e-111 344
MS.gene51033.t1 AT3G45720 34.471 586 342 10 17 598 5 552 2.99e-109 339
MS.gene51033.t1 AT3G45700 34.589 584 328 11 18 589 1 542 8.64e-109 338
MS.gene51033.t1 AT3G45650 34.465 589 333 10 23 585 14 575 1.04e-108 338
MS.gene51033.t1 AT4G21680 32.923 568 370 6 21 584 18 578 3.88e-105 330
MS.gene51033.t1 AT3G54450 33.160 576 350 9 24 589 2 552 1.11e-103 325
MS.gene51033.t1 AT3G45710 32.363 584 353 10 18 589 1 554 4.19e-102 321
MS.gene51033.t1 AT3G53960 32.517 572 362 8 21 584 23 578 7.99e-102 321
MS.gene51033.t1 AT2G37900 32.877 584 360 11 8 584 13 571 8.63e-101 318
MS.gene51033.t1 AT1G32450 31.220 615 384 13 3 598 5 599 3.37e-95 304
MS.gene51033.t1 AT5G13400 32.686 566 359 10 34 590 67 619 1.67e-94 303
MS.gene51033.t1 AT3G21670 31.058 586 368 9 24 597 22 583 9.43e-93 297
MS.gene51033.t1 AT5G46050 31.754 570 368 8 33 596 28 582 1.33e-92 296
MS.gene51033.t1 AT2G02020 34.622 569 298 11 8 571 15 514 3.46e-92 294
MS.gene51033.t1 AT1G12110 31.516 587 384 7 11 590 7 582 8.09e-92 295
MS.gene51033.t1 AT2G37900 33.333 510 314 9 78 584 6 492 5.86e-91 290
MS.gene51033.t1 AT5G46040 31.687 587 365 10 21 587 4 574 1.07e-90 292
MS.gene51033.t1 AT1G59740 31.453 585 358 11 11 575 12 573 4.16e-90 290
MS.gene51033.t1 AT2G40460 32.437 558 344 9 35 584 28 560 5.40e-90 290
MS.gene51033.t1 AT3G45690 31.874 571 317 13 28 598 15 513 3.39e-89 286
MS.gene51033.t1 AT2G26690 31.283 569 367 7 21 584 14 563 3.64e-89 287
MS.gene51033.t1 AT2G26690 31.627 547 350 7 43 584 3 530 1.18e-86 280
MS.gene51033.t1 AT1G22550 31.399 586 365 8 10 583 3 563 1.55e-86 280
MS.gene51033.t1 AT5G19640 29.931 578 360 11 34 597 62 608 1.69e-85 279
MS.gene51033.t1 AT1G22540 33.633 556 333 10 34 584 33 557 8.37e-85 275
MS.gene51033.t1 AT1G33440 31.142 578 349 13 20 576 18 567 1.24e-84 276
MS.gene51033.t1 AT2G26690 31.471 537 344 7 53 584 1 518 1.72e-83 271
MS.gene51033.t1 AT1G22570 31.729 561 341 10 10 555 3 536 2.84e-82 269
MS.gene51033.t1 AT1G72130 31.892 555 324 8 34 581 28 535 2.12e-81 266
MS.gene51033.t1 AT1G72140 30.427 585 354 10 11 580 7 553 1.42e-80 264
MS.gene51033.t1 AT1G72125 31.787 582 368 9 5 582 3 559 1.42e-80 265
MS.gene51033.t1 AT1G27040 30.275 545 360 6 40 581 32 559 1.58e-77 256
MS.gene51033.t1 AT1G27040 30.275 545 360 6 40 581 36 563 1.62e-77 256
MS.gene51033.t1 AT1G72120 32.363 584 360 9 5 583 3 556 5.18e-77 255
MS.gene51033.t1 AT1G22570 31.740 523 321 9 42 555 4 499 7.52e-77 254
MS.gene51033.t1 AT1G27040 30.370 540 356 6 45 581 9 531 1.75e-76 253
MS.gene51033.t1 AT5G46050 31.753 485 311 7 117 596 1 470 1.34e-75 249
MS.gene51033.t1 AT1G69850 29.422 571 381 9 29 585 23 585 3.02e-75 251
MS.gene51033.t1 AT5G62730 29.234 561 342 10 40 582 6 529 2.72e-71 239
MS.gene51033.t1 AT5G62730 29.234 561 342 10 40 582 65 588 7.66e-71 239
MS.gene51033.t1 AT1G72130 33.636 440 249 7 149 581 14 417 4.14e-70 233
MS.gene51033.t1 AT1G72130 33.636 440 249 7 149 581 14 417 4.14e-70 233
MS.gene51033.t1 AT5G14940 27.273 561 352 12 48 587 24 549 5.90e-63 217
MS.gene51033.t1 AT3G25260 27.903 534 330 10 45 576 35 515 9.20e-60 208
MS.gene51033.t1 AT3G01350 25.614 570 360 14 48 587 24 559 2.14e-52 189
MS.gene51033.t1 AT3G25280 26.426 526 328 16 58 576 48 521 6.45e-46 170
MS.gene51033.t1 AT5G11570 33.846 260 159 2 317 576 230 476 4.73e-42 158
MS.gene51033.t1 AT5G11570 32.735 223 142 4 33 252 15 232 6.47e-35 138
MS.gene51033.t1 AT2G38100 24.774 553 358 18 55 595 14 520 1.79e-25 110
MS.gene51033.t1 AT2G38100 24.590 549 356 18 59 595 2 504 2.79e-25 110
MS.gene51033.t1 AT2G38100 24.774 553 358 18 55 595 20 526 2.94e-25 110

Find 142 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTCTGTAATCTTCTTTA+TGG 0.098985 8.2:+18320392 MS.gene51033:CDS
GCTATAGAAATTGTAAATTT+AGG 0.211624 8.2:+18321457 MS.gene51033:CDS
TCTTCTGTAATCTTCTTTAT+GGG 0.213338 8.2:+18320393 MS.gene51033:CDS
CATCCCCTGTAGTTAATCTT+AGG 0.220990 8.2:-18319414 None:intergenic
TTCCTTATACTTATCAATTC+AGG 0.244025 8.2:+18320574 MS.gene51033:CDS
TTTAACTTTCACATACAATT+TGG 0.252619 8.2:-18320418 None:intergenic
CAACACAGAATCTGGGAAAA+AGG 0.270691 8.2:+18320233 MS.gene51033:CDS
TTTAATCCCAACACAGAATC+TGG 0.284033 8.2:+18320225 MS.gene51033:CDS
TACCTGAATTGATAAGTATA+AGG 0.310769 8.2:-18320576 None:intergenic
CAGTCTCACCATTTGTCATT+TGG 0.322103 8.2:-18319338 None:intergenic
TGATGATCAGTGTGGCAATT+TGG 0.322913 8.2:+18320951 MS.gene51033:CDS
AATATTATCAACATCTTTAA+CGG 0.326470 8.2:+18319658 MS.gene51033:CDS
TCTGCGGCGATCTTCAACTA+TGG 0.336163 8.2:-18321101 None:intergenic
CTCTACTATGCGGCCCATGC+AGG 0.340320 8.2:+18321307 MS.gene51033:CDS
GAAATAGCAATTTACCAAAA+AGG 0.352703 8.2:-18319770 None:intergenic
ACAGTTCTAAAGACTGGTTT+AGG 0.355144 8.2:+18320141 MS.gene51033:CDS
CGACCATGTAACTTAGCATT+TGG 0.357095 8.2:+18320192 MS.gene51033:CDS
TGGGATTTATTTGATCTTGT+GGG 0.359466 8.2:-18320712 None:intergenic
TTTGCCACTCTGTGGGCCCT+TGG 0.374915 8.2:-18320116 None:intergenic
GAGAACATGAGAAGCATTGC+AGG 0.375666 8.2:+18321280 MS.gene51033:CDS
GTGAGCTGGGCTGTCGGTTT+GGG 0.376937 8.2:+18320345 MS.gene51033:CDS
CTGCAAACTGCATAGATTCC+AGG 0.378684 8.2:-18320753 None:intergenic
ATCACTGTCAAATCTAAAAC+CGG 0.384021 8.2:+18321373 MS.gene51033:CDS
ACCAACTTTGCAACATTGAT+AGG 0.385520 8.2:+18319685 MS.gene51033:CDS
CGGCACTTTATCCAATCTAT+TGG 0.392290 8.2:+18319591 MS.gene51033:CDS
AACTTGCACTATGCTAGTTA+TGG 0.393823 8.2:-18320454 None:intergenic
TGTTATGTGCACAGTGGTAT+AGG 0.396836 8.2:+18321488 MS.gene51033:CDS
TGTGAGCTGGGCTGTCGGTT+TGG 0.411158 8.2:+18320344 MS.gene51033:CDS
TAAAACCGGGAGTTGGTTGC+CGG 0.416053 8.2:+18321387 MS.gene51033:CDS
TGTTGAGAGTGTTACCCATA+TGG 0.417989 8.2:+18320798 MS.gene51033:CDS
ACTTGCACTATGCTAGTTAT+GGG 0.418400 8.2:-18320453 None:intergenic
TCCTATCAATGTTGCAAAGT+TGG 0.424224 8.2:-18319686 None:intergenic
GACTGGTTTAGGATTATTGA+TGG 0.428176 8.2:+18320152 MS.gene51033:CDS
CATGAATGCTTCAGCAAGTC+CGG 0.434921 8.2:-18321218 None:intergenic
GGATCTGAACAAGGGGAGAT+TGG 0.435993 8.2:+18321411 MS.gene51033:CDS
TTGGGATTTATTTGATCTTG+TGG 0.436356 8.2:-18320713 None:intergenic
TCTACTATGCGGCCCATGCA+GGG 0.436994 8.2:+18321308 MS.gene51033:CDS
GCTGATTCCTCAGCTGGCAT+TGG 0.439801 8.2:+18321195 MS.gene51033:CDS
AAGGTCATGCCCTTCATTAT+AGG 0.442621 8.2:+18319438 MS.gene51033:CDS
ATTCCTCAGCTGGCATTGGC+CGG 0.445828 8.2:+18321199 MS.gene51033:CDS
TCAAATAACTTGCCCCTGCA+TGG 0.447972 8.2:-18321321 None:intergenic
ATCCCCTGTAGTTAATCTTA+GGG 0.448750 8.2:-18319413 None:intergenic
CGAGTGATTCTCTGGAGTAA+AGG 0.450585 8.2:-18321001 None:intergenic
ACGGATCTGCTTCTGATCCC+TGG 0.454119 8.2:+18320735 MS.gene51033:CDS
CTCTGTGGGCCCTTGGCATG+TGG 0.456430 8.2:-18320109 None:intergenic
TTAGAATTCATTGTCTTGGC+AGG 0.457206 8.2:-18320549 None:intergenic
CTCCCCTTGTTCAGATCCTC+CGG 0.458757 8.2:-18321406 None:intergenic
CTTCTGTAATCTTCTTTATG+GGG 0.464112 8.2:+18320394 MS.gene51033:CDS
TCTGTGGCTGATTCCTCAGC+TGG 0.470417 8.2:+18321189 MS.gene51033:CDS
AGTAAGATAGACCAATAGAT+TGG 0.474345 8.2:-18319602 None:intergenic
TTATTGATGGTAGGAGCTGC+AGG 0.476831 8.2:+18320165 MS.gene51033:CDS
TTGTGGTTGCAACAAAGAAA+AGG 0.477347 8.2:+18320478 MS.gene51033:CDS
TTTCTTGATTCCACTTCTAA+GGG 0.478453 8.2:-18321142 None:intergenic
GTTGAGAGTGTTACCCATAT+GGG 0.479347 8.2:+18320799 MS.gene51033:CDS
AATGAAAATAGCGGAGATGA+TGG 0.480606 8.2:+18319390 MS.gene51033:CDS
GCAATGCTTCTCATGTTCTC+AGG 0.486361 8.2:-18321277 None:intergenic
AAGACATAGTAGGATGCTCC+TGG 0.489946 8.2:-18320926 None:intergenic
AACTGTCATTTGCCACTCTG+TGG 0.492338 8.2:-18320124 None:intergenic
ACATACAGTCAAATGTGAGC+TGG 0.495911 8.2:+18320331 MS.gene51033:CDS
CAAATGACAGTTCTAAAGAC+TGG 0.496084 8.2:+18320135 MS.gene51033:CDS
TCTAATTCTTCACATGGATG+TGG 0.497410 8.2:-18320081 None:intergenic
GTCTTGCTCACCTATAATGA+AGG 0.498087 8.2:-18319448 None:intergenic
TTCTGTAATCTTCTTTATGG+GGG 0.502130 8.2:+18320395 MS.gene51033:CDS
CAGTTTGCAGCAAGTGGAAG+AGG 0.504000 8.2:+18320766 MS.gene51033:CDS
TGAAGATCGCCGCAGAACTC+TGG 0.504683 8.2:+18321108 MS.gene51033:CDS
GATCATCAGAAAGACATAGT+AGG 0.505688 8.2:-18320936 None:intergenic
TATGTAGACAATAATTGTTA+AGG 0.508716 8.2:-18320313 None:intergenic
CAAAGCAAGTTCATGATCCC+AGG 0.512280 8.2:+18320908 MS.gene51033:CDS
CTAGTTATGGGACTACCACT+TGG 0.512398 8.2:-18320441 None:intergenic
GACAAAAGCATCAAAGCTGC+AGG 0.512838 8.2:-18320372 None:intergenic
TTTGAGAAGCTTGGAGCCAT+CGG 0.517505 8.2:+18319571 MS.gene51033:CDS
CTCCTTCAGAGGATGGGCAT+TGG 0.517847 8.2:+18321043 MS.gene51033:CDS
GGTGCAATTTCATCAATGTC+AGG 0.520086 8.2:+18321166 MS.gene51033:CDS
ATCATGAACCAAATGACAAA+TGG 0.523642 8.2:+18319330 None:intergenic
AAGTTTAGAATTCATTGTCT+TGG 0.526994 8.2:-18320553 None:intergenic
TAGATTTGACAGTGATATGG+TGG 0.529358 8.2:-18321366 None:intergenic
ATGGCCCTAAGATTAACTAC+AGG 0.529462 8.2:+18319409 MS.gene51033:CDS
ATCCTCCGGCAACCAACTCC+CGG 0.531321 8.2:-18321392 None:intergenic
GTGGTATAGGTACAAAGAAA+CGG 0.533314 8.2:+18321501 MS.gene51033:CDS
GGATCAGCAGCTTCTTCACT+TGG 0.533873 8.2:+18320256 MS.gene51033:CDS
CATCACACTCCTTCAGAGGA+TGG 0.539146 8.2:+18321036 MS.gene51033:CDS
CCAGAGAATCACTCGAAAAG+AGG 0.540228 8.2:+18321009 MS.gene51033:CDS
GGTTTAGGATTATTGATGGT+AGG 0.542685 8.2:+18320156 MS.gene51033:CDS
GGATCAGAAGCAGATCCGTT+GGG 0.543463 8.2:-18320731 None:intergenic
GGTACATAGTTGAATAGTGA+AGG 0.544746 8.2:-18320528 None:intergenic
TTAGAAGTGGAATCAAGAAA+AGG 0.547885 8.2:+18321145 MS.gene51033:CDS
TAGCATAGTGCAAGTTATTG+TGG 0.549021 8.2:+18320461 MS.gene51033:CDS
GGGATCAGAAGCAGATCCGT+TGG 0.551449 8.2:-18320732 None:intergenic
GCTCCAAATGCTAAGTTACA+TGG 0.552073 8.2:-18320195 None:intergenic
CTAAGATTAACTACAGGGGA+TGG 0.553300 8.2:+18319415 MS.gene51033:CDS
TTAGAAAACACCACATGCCA+AGG 0.554260 8.2:+18320099 MS.gene51033:CDS
CATACAGTCAAATGTGAGCT+GGG 0.554401 8.2:+18320332 MS.gene51033:CDS
CAAATAACTTGCCCCTGCAT+GGG 0.555881 8.2:-18321320 None:intergenic
TCTTACTACAGTATTCAACT+TGG 0.559761 8.2:+18319618 MS.gene51033:CDS
ACACTAAAATAGTGTGCTGT+TGG 0.560484 8.2:-18320853 None:intergenic
ACTGTCATTTGCCACTCTGT+GGG 0.563134 8.2:-18320123 None:intergenic
TTAATCCCAACACAGAATCT+GGG 0.569670 8.2:+18320226 MS.gene51033:CDS
ATCACACTCCTTCAGAGGAT+GGG 0.571291 8.2:+18321037 MS.gene51033:CDS
TCTATGCAGTTTGCAGCAAG+TGG 0.573284 8.2:+18320760 MS.gene51033:CDS
CAGAGAATCACTCGAAAAGA+GGG 0.575027 8.2:+18321010 MS.gene51033:CDS
TGCCAATGCCCATCCTCTGA+AGG 0.576611 8.2:-18321045 None:intergenic
TGCAAACTGCATAGATTCCA+GGG 0.576824 8.2:-18320752 None:intergenic
AAAACGGCTGAAACCCATAT+GGG 0.577568 8.2:-18320812 None:intergenic
GGGATTTATTTGATCTTGTG+GGG 0.577965 8.2:-18320711 None:intergenic
GATTAACTACAGGGGATGGA+AGG 0.578985 8.2:+18319419 MS.gene51033:CDS
GCCTGTCAGATAAAAGCGCT+TGG 0.579931 8.2:-18320877 None:intergenic
TCAAATGTGAGCTGGGCTGT+CGG 0.580630 8.2:+18320339 MS.gene51033:CDS
AGTCCGGCCAATGCCAGCTG+AGG 0.598859 8.2:-18321202 None:intergenic
TCAAATCTAAAACCGGGAGT+TGG 0.599927 8.2:+18321380 MS.gene51033:CDS
GAAAAGGAAGCTGAAGCTCG+CGG 0.601282 8.2:+18320494 MS.gene51033:CDS
CTACTATGCGGCCCATGCAG+GGG 0.603035 8.2:+18321309 MS.gene51033:CDS
TCTTACTAAACCCTTAGAAG+TGG 0.613587 8.2:+18321132 MS.gene51033:CDS
TGTGTTGGGATTAAACTGAT+CGG 0.614941 8.2:-18320217 None:intergenic
AACCGGGAGTTGGTTGCCGG+AGG 0.616355 8.2:+18321390 MS.gene51033:CDS
GTGGCATCACACTCCTTCAG+AGG 0.618161 8.2:+18321032 MS.gene51033:CDS
TAGATTGGATAAAGTGCCGA+TGG 0.618975 8.2:-18319587 None:intergenic
TGCCGGAGGATCTGAACAAG+GGG 0.626761 8.2:+18321404 MS.gene51033:CDS
TGGCCCTAAGATTAACTACA+GGG 0.627240 8.2:+18319410 MS.gene51033:CDS
TCTTGCTCACCTATAATGAA+GGG 0.631706 8.2:-18319447 None:intergenic
AGACATAGTAGGATGCTCCT+GGG 0.632783 8.2:-18320925 None:intergenic
TATGTGAAAGTTAAACCAAG+TGG 0.633751 8.2:+18320426 MS.gene51033:CDS
GTTGCCGGAGGATCTGAACA+AGG 0.637725 8.2:+18321402 MS.gene51033:CDS
CAAATGCTAAGTTACATGGT+CGG 0.638668 8.2:-18320191 None:intergenic
GTACATAGTTGAATAGTGAA+GGG 0.638925 8.2:-18320527 None:intergenic
TTTCATCAATGTCAGGTCTG+TGG 0.645980 8.2:+18321173 MS.gene51033:CDS
TCACTGTCAAATCTAAAACC+GGG 0.646323 8.2:+18321374 MS.gene51033:CDS
TAGTAAGAGCCAGAGTTCTG+CGG 0.646451 8.2:-18321117 None:intergenic
CAAGATCAAATAAATCCCAA+CGG 0.649175 8.2:+18320716 MS.gene51033:CDS
CATGCCAAGGGCCCACAGAG+TGG 0.650691 8.2:+18320112 MS.gene51033:CDS
TAGAAAACACCACATGCCAA+GGG 0.661562 8.2:+18320100 MS.gene51033:CDS
TATTGATGGTAGGAGCTGCA+GGG 0.662055 8.2:+18320166 MS.gene51033:CDS
TGCAGGATCTCTCTACTATG+CGG 0.664807 8.2:+18321297 MS.gene51033:CDS
TGACAGGTTTCTTGACAAAG+CGG 0.665216 8.2:+18320679 MS.gene51033:intron
TTGCCGGAGGATCTGAACAA+GGG 0.680587 8.2:+18321403 MS.gene51033:CDS
AGAATCACTCGAAAAGAGGG+TGG 0.681490 8.2:+18321013 MS.gene51033:CDS
TGAGACTGTGGAGAATGAAG+AGG 0.691991 8.2:+18319353 MS.gene51033:CDS
GACACTGTCATTCTGCACCG+TGG 0.697466 8.2:+18319744 MS.gene51033:CDS
AATGACAAATGGTGAGACTG+TGG 0.703194 8.2:+18319341 MS.gene51033:CDS
GGCCCTAAGATTAACTACAG+GGG 0.705151 8.2:+18319411 MS.gene51033:CDS
TTGCTGAAGAATGAAAATAG+CGG 0.731233 8.2:+18319381 MS.gene51033:CDS
GCTTTGTGTTATGTGCACAG+TGG 0.748088 8.2:+18321482 MS.gene51033:CDS
TGTCTTTCTGATGATCAGTG+TGG 0.749278 8.2:+18320943 MS.gene51033:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATCAACATCTTTAA+CGG + chr8.2:18319658-18319677 MS.gene51033:CDS 15.0%
!!! CATATAATTATTTTCAATAG+TGG + chr8.2:18320637-18320656 MS.gene51033:intron 15.0%
!!! TTATGTTATGCATTTTAAAA+TGG - chr8.2:18319936-18319955 None:intergenic 15.0%
!! ATAAAACAATCTGAAAAAGA+TGG + chr8.2:18321553-18321572 MS.gene51033:CDS 20.0%
!! GATAACAACATAGTAAAAAA+CGG - chr8.2:18320831-18320850 None:intergenic 20.0%
!! GCTATAGAAATTGTAAATTT+AGG + chr8.2:18321457-18321476 MS.gene51033:CDS 20.0%
!! GTGTTTATCAACAAAAAAAA+TGG - chr8.2:18319823-18319842 None:intergenic 20.0%
!! TATCAACAAAAAAAATGGAA+TGG - chr8.2:18319818-18319837 None:intergenic 20.0%
!! TATGTAGACAATAATTGTTA+AGG - chr8.2:18320316-18320335 None:intergenic 20.0%
!!! TATTTTCAATAGTGGTTTAA+AGG + chr8.2:18320645-18320664 MS.gene51033:intron 20.0%
!!! TTTAACTTTCACATACAATT+TGG - chr8.2:18320421-18320440 None:intergenic 20.0%
! AACACTAAGAAATTAGCATT+TGG + chr8.2:18320602-18320621 MS.gene51033:intron 25.0%
! AAGTTAGGGATATCTAAATT+TGG + chr8.2:18319847-18319866 MS.gene51033:intron 25.0%
! GAAATAGCAATTTACCAAAA+AGG - chr8.2:18319773-18319792 None:intergenic 25.0%
! TACCTGAATTGATAAGTATA+AGG - chr8.2:18320579-18320598 None:intergenic 25.0%
! TCTTCTGTAATCTTCTTTAT+GGG + chr8.2:18320393-18320412 MS.gene51033:CDS 25.0%
! TGATAAACACAATGAAGTTA+GGG + chr8.2:18319833-18319852 MS.gene51033:intron 25.0%
! TTCCTTATACTTATCAATTC+AGG + chr8.2:18320574-18320593 MS.gene51033:CDS 25.0%
! TTGATAAACACAATGAAGTT+AGG + chr8.2:18319832-18319851 MS.gene51033:intron 25.0%
!! AAGTTTAGAATTCATTGTCT+TGG - chr8.2:18320556-18320575 None:intergenic 25.0%
!! TTTTAGATTTGACAGTGATA+TGG - chr8.2:18321372-18321391 None:intergenic 25.0%
ACTAAGAAATTAGCATTTGG+TGG + chr8.2:18320605-18320624 MS.gene51033:intron 30.0%
AGTAAGATAGACCAATAGAT+TGG - chr8.2:18319605-18319624 None:intergenic 30.0%
ATTTGAATGATGAATGCATC+AGG - chr8.2:18319795-18319814 None:intergenic 30.0%
CAAGATCAAATAAATCCCAA+CGG + chr8.2:18320716-18320735 MS.gene51033:CDS 30.0%
CAATCTGAAAAAGATGGTAA+TGG + chr8.2:18321559-18321578 MS.gene51033:CDS 30.0%
CTTCTGTAATCTTCTTTATG+GGG + chr8.2:18320394-18320413 MS.gene51033:CDS 30.0%
GTACATAGTTGAATAGTGAA+GGG - chr8.2:18320530-18320549 None:intergenic 30.0%
GTCTTCTGTAATCTTCTTTA+TGG + chr8.2:18320392-18320411 MS.gene51033:CDS 30.0%
TATGTGAAAGTTAAACCAAG+TGG + chr8.2:18320426-18320445 MS.gene51033:CDS 30.0%
TCTTACTACAGTATTCAACT+TGG + chr8.2:18319618-18319637 MS.gene51033:CDS 30.0%
TGGGATTTATTTGATCTTGT+GGG - chr8.2:18320715-18320734 None:intergenic 30.0%
TTAGAAGTGGAATCAAGAAA+AGG + chr8.2:18321145-18321164 MS.gene51033:CDS 30.0%
TTCTGTAATCTTCTTTATGG+GGG + chr8.2:18320395-18320414 MS.gene51033:CDS 30.0%
TTGCTGAAGAATGAAAATAG+CGG + chr8.2:18319381-18319400 MS.gene51033:CDS 30.0%
TTGGGATTTATTTGATCTTG+TGG - chr8.2:18320716-18320735 None:intergenic 30.0%
TTTCTTGATTCCACTTCTAA+GGG - chr8.2:18321145-18321164 None:intergenic 30.0%
! ATCACTGTCAAATCTAAAAC+CGG + chr8.2:18321373-18321392 MS.gene51033:CDS 30.0%
! GTGTTTTCTAATTCTTCACA+TGG - chr8.2:18320090-18320109 None:intergenic 30.0%
! TTTTCTTGATTCCACTTCTA+AGG - chr8.2:18321146-18321165 None:intergenic 30.0%
!! AATGAGATTTTTGAGAAGCT+TGG + chr8.2:18319562-18319581 MS.gene51033:CDS 30.0%
AACACAGAATCTGGGAAAAA+GGG + chr8.2:18320234-18320253 MS.gene51033:CDS 35.0%
AACTTGCACTATGCTAGTTA+TGG - chr8.2:18320457-18320476 None:intergenic 35.0%
ACACTAAAATAGTGTGCTGT+TGG - chr8.2:18320856-18320875 None:intergenic 35.0%
ACCAACTTTGCAACATTGAT+AGG + chr8.2:18319685-18319704 MS.gene51033:CDS 35.0%
ACTTGCACTATGCTAGTTAT+GGG - chr8.2:18320456-18320475 None:intergenic 35.0%
ATCCCCTGTAGTTAATCTTA+GGG - chr8.2:18319416-18319435 None:intergenic 35.0%
ATTTACCAAAAAGGAAGCCA+CGG - chr8.2:18319764-18319783 None:intergenic 35.0%
CAAATGCTAAGTTACATGGT+CGG - chr8.2:18320194-18320213 None:intergenic 35.0%
GATCATCAGAAAGACATAGT+AGG - chr8.2:18320939-18320958 None:intergenic 35.0%
GGGATTTATTTGATCTTGTG+GGG - chr8.2:18320714-18320733 None:intergenic 35.0%
GGTACATAGTTGAATAGTGA+AGG - chr8.2:18320531-18320550 None:intergenic 35.0%
GTGGTATAGGTACAAAGAAA+CGG + chr8.2:18321501-18321520 MS.gene51033:CDS 35.0%
TAGATTTGACAGTGATATGG+TGG - chr8.2:18321369-18321388 None:intergenic 35.0%
TAGCATAGTGCAAGTTATTG+TGG + chr8.2:18320461-18320480 MS.gene51033:CDS 35.0%
TCAAGAAACCTGTCAATACA+AGG - chr8.2:18320674-18320693 None:intergenic 35.0%
TCCTATCAATGTTGCAAAGT+TGG - chr8.2:18319689-18319708 None:intergenic 35.0%
TCTAATTCTTCACATGGATG+TGG - chr8.2:18320084-18320103 None:intergenic 35.0%
TCTTACTAAACCCTTAGAAG+TGG + chr8.2:18321132-18321151 MS.gene51033:CDS 35.0%
TCTTGCTCACCTATAATGAA+GGG - chr8.2:18319450-18319469 None:intergenic 35.0%
TGTGTTGGGATTAAACTGAT+CGG - chr8.2:18320220-18320239 None:intergenic 35.0%
TTAATCCCAACACAGAATCT+GGG + chr8.2:18320226-18320245 MS.gene51033:CDS 35.0%
TTAGAATTCATTGTCTTGGC+AGG - chr8.2:18320552-18320571 None:intergenic 35.0%
TTGTGGTTGCAACAAAGAAA+AGG + chr8.2:18320478-18320497 MS.gene51033:CDS 35.0%
TTTAATCCCAACACAGAATC+TGG + chr8.2:18320225-18320244 MS.gene51033:CDS 35.0%
! AACAACTTTTCGGTCGTAAA+TGG - chr8.2:18320981-18321000 None:intergenic 35.0%
! AATGAAAATAGCGGAGATGA+TGG + chr8.2:18319390-18319409 MS.gene51033:CDS 35.0%
! ACAACTTTTCGGTCGTAAAT+GGG - chr8.2:18320980-18320999 None:intergenic 35.0%
! GATTCATTTTCGTGAATGAC+AGG + chr8.2:18319538-18319557 MS.gene51033:intron 35.0%
! GGAGTAAAGGAACAACTTTT+CGG - chr8.2:18320991-18321010 None:intergenic 35.0%
! GGTTTAGGATTATTGATGGT+AGG + chr8.2:18320156-18320175 MS.gene51033:CDS 35.0%
! TCACTGTCAAATCTAAAACC+GGG + chr8.2:18321374-18321393 MS.gene51033:CDS 35.0%
! TTTTTCCCAGATTCTGTGTT+GGG - chr8.2:18320234-18320253 None:intergenic 35.0%
!! ACAGTTCTAAAGACTGGTTT+AGG + chr8.2:18320141-18320160 MS.gene51033:CDS 35.0%
!! CAAATGACAGTTCTAAAGAC+TGG + chr8.2:18320135-18320154 MS.gene51033:CDS 35.0%
!! GACTGGTTTAGGATTATTGA+TGG + chr8.2:18320152-18320171 MS.gene51033:CDS 35.0%
!!! ATGGGCATTGGCATTTTTTT+GGG + chr8.2:18321055-18321074 MS.gene51033:CDS 35.0%
AAAAACGGCTGAAACCCATA+TGG - chr8.2:18320816-18320835 None:intergenic 40.0%
AAAACGGCTGAAACCCATAT+GGG - chr8.2:18320815-18320834 None:intergenic 40.0%
AAGGTCATGCCCTTCATTAT+AGG + chr8.2:18319438-18319457 MS.gene51033:CDS 40.0%
AATGACAAATGGTGAGACTG+TGG + chr8.2:18319341-18319360 MS.gene51033:CDS 40.0%
ACACAGAATCTGGGAAAAAG+GGG + chr8.2:18320235-18320254 MS.gene51033:CDS 40.0%
ACATACAGTCAAATGTGAGC+TGG + chr8.2:18320331-18320350 MS.gene51033:CDS 40.0%
ATAGGTGAGCAAGACTTCAA+CGG + chr8.2:18319456-18319475 MS.gene51033:intron 40.0%
ATGGCCCTAAGATTAACTAC+AGG + chr8.2:18319409-18319428 MS.gene51033:CDS 40.0%
CAACACAGAATCTGGGAAAA+AGG + chr8.2:18320233-18320252 MS.gene51033:CDS 40.0%
CAGAGAATCACTCGAAAAGA+GGG + chr8.2:18321010-18321029 MS.gene51033:CDS 40.0%
CAGTCTCACCATTTGTCATT+TGG - chr8.2:18319341-18319360 None:intergenic 40.0%
CATACAGTCAAATGTGAGCT+GGG + chr8.2:18320332-18320351 MS.gene51033:CDS 40.0%
CATCCCCTGTAGTTAATCTT+AGG - chr8.2:18319417-18319436 None:intergenic 40.0%
CGACCATGTAACTTAGCATT+TGG + chr8.2:18320192-18320211 MS.gene51033:CDS 40.0%
CGGCACTTTATCCAATCTAT+TGG + chr8.2:18319591-18319610 MS.gene51033:CDS 40.0%
CTAAGATTAACTACAGGGGA+TGG + chr8.2:18319415-18319434 MS.gene51033:CDS 40.0%
GCTCCAAATGCTAAGTTACA+TGG - chr8.2:18320198-18320217 None:intergenic 40.0%
GGTGCAATTTCATCAATGTC+AGG + chr8.2:18321166-18321185 MS.gene51033:CDS 40.0%
GTATTACAAGCAAACCCTGA+AGG - chr8.2:18320032-18320051 None:intergenic 40.0%
GTCTTGCTCACCTATAATGA+AGG - chr8.2:18319451-18319470 None:intergenic 40.0%
TAGAAAACACCACATGCCAA+GGG + chr8.2:18320100-18320119 MS.gene51033:CDS 40.0%
TGACAGGTTTCTTGACAAAG+CGG + chr8.2:18320679-18320698 MS.gene51033:intron 40.0%
TGATGATCAGTGTGGCAATT+TGG + chr8.2:18320951-18320970 MS.gene51033:CDS 40.0%
TGCAAACTGCATAGATTCCA+GGG - chr8.2:18320755-18320774 None:intergenic 40.0%
TGGCCCTAAGATTAACTACA+GGG + chr8.2:18319410-18319429 MS.gene51033:CDS 40.0%
TGTCTTGTAGCGACCAAAAA+AGG - chr8.2:18319728-18319747 None:intergenic 40.0%
TGTCTTTCTGATGATCAGTG+TGG + chr8.2:18320943-18320962 MS.gene51033:CDS 40.0%
TGTTATGTGCACAGTGGTAT+AGG + chr8.2:18321488-18321507 MS.gene51033:CDS 40.0%
TTAGAAAACACCACATGCCA+AGG + chr8.2:18320099-18320118 MS.gene51033:CDS 40.0%
TTTCATCAATGTCAGGTCTG+TGG + chr8.2:18321173-18321192 MS.gene51033:CDS 40.0%
! AAAGGATGCCTTGTATTGAC+AGG + chr8.2:18320663-18320682 MS.gene51033:intron 40.0%
! CTTTTTCCCAGATTCTGTGT+TGG - chr8.2:18320235-18320254 None:intergenic 40.0%
! TCAAATCTAAAACCGGGAGT+TGG + chr8.2:18321380-18321399 MS.gene51033:CDS 40.0%
! TTTTATCTGACAGGCGCATT+GGG + chr8.2:18320885-18320904 MS.gene51033:CDS 40.0%
! TTTTCCTCCGATGCCTTTTT+TGG + chr8.2:18319712-18319731 MS.gene51033:CDS 40.0%
!! GTTGAGAGTGTTACCCATAT+GGG + chr8.2:18320799-18320818 MS.gene51033:CDS 40.0%
!! TAGATTGGATAAAGTGCCGA+TGG - chr8.2:18319590-18319609 None:intergenic 40.0%
!! TGTTGAGAGTGTTACCCATA+TGG + chr8.2:18320798-18320817 MS.gene51033:CDS 40.0%
!!! GATGGGCATTGGCATTTTTT+TGG + chr8.2:18321054-18321073 MS.gene51033:CDS 40.0%
AAGACATAGTAGGATGCTCC+TGG - chr8.2:18320929-18320948 None:intergenic 45.0%
AGAATCACTCGAAAAGAGGG+TGG + chr8.2:18321013-18321032 MS.gene51033:CDS 45.0%
AGACATAGTAGGATGCTCCT+GGG - chr8.2:18320928-18320947 None:intergenic 45.0%
ATCACACTCCTTCAGAGGAT+GGG + chr8.2:18321037-18321056 MS.gene51033:CDS 45.0%
CAAAGCAAGTTCATGATCCC+AGG + chr8.2:18320908-18320927 MS.gene51033:CDS 45.0%
CAGGGAAATCTAGGAATCAG+AGG - chr8.2:18320006-18320025 None:intergenic 45.0%
CATGAATGCTTCAGCAAGTC+CGG - chr8.2:18321221-18321240 None:intergenic 45.0%
CCAGAGAATCACTCGAAAAG+AGG + chr8.2:18321009-18321028 MS.gene51033:CDS 45.0%
CTAGTTATGGGACTACCACT+TGG - chr8.2:18320444-18320463 None:intergenic 45.0%
CTGCAAACTGCATAGATTCC+AGG - chr8.2:18320756-18320775 None:intergenic 45.0%
GATTAACTACAGGGGATGGA+AGG + chr8.2:18319419-18319438 MS.gene51033:CDS 45.0%
GCAATGCTTCTCATGTTCTC+AGG - chr8.2:18321280-18321299 None:intergenic 45.0%
GCTTTGTGTTATGTGCACAG+TGG + chr8.2:18321482-18321501 MS.gene51033:CDS 45.0%
GGCCCTAAGATTAACTACAG+GGG + chr8.2:18319411-18319430 MS.gene51033:CDS 45.0%
TAGTAAGAGCCAGAGTTCTG+CGG - chr8.2:18321120-18321139 None:intergenic 45.0%
TCTATGCAGTTTGCAGCAAG+TGG + chr8.2:18320760-18320779 MS.gene51033:CDS 45.0%
TGAGACTGTGGAGAATGAAG+AGG + chr8.2:18319353-18319372 MS.gene51033:CDS 45.0%
TGCAGGATCTCTCTACTATG+CGG + chr8.2:18321297-18321316 MS.gene51033:CDS 45.0%
TTTGAGAAGCTTGGAGCCAT+CGG + chr8.2:18319571-18319590 MS.gene51033:CDS 45.0%
! AACTGTCATTTGCCACTCTG+TGG - chr8.2:18320127-18320146 None:intergenic 45.0%
! ACTGTCATTTGCCACTCTGT+GGG - chr8.2:18320126-18320145 None:intergenic 45.0%
! CAAATAACTTGCCCCTGCAT+GGG - chr8.2:18321323-18321342 None:intergenic 45.0%
! CTTTTATCTGACAGGCGCAT+TGG + chr8.2:18320884-18320903 MS.gene51033:CDS 45.0%
! GTAGCGACCAAAAAAGGCAT+CGG - chr8.2:18319722-18319741 None:intergenic 45.0%
! TATTGATGGTAGGAGCTGCA+GGG + chr8.2:18320166-18320185 MS.gene51033:CDS 45.0%
! TCAAATAACTTGCCCCTGCA+TGG - chr8.2:18321324-18321343 None:intergenic 45.0%
! TCCAAGCGCTTTTATCTGAC+AGG + chr8.2:18320876-18320895 MS.gene51033:CDS 45.0%
! TTATTGATGGTAGGAGCTGC+AGG + chr8.2:18320165-18320184 MS.gene51033:CDS 45.0%
!! CGAGTGATTCTCTGGAGTAA+AGG - chr8.2:18321004-18321023 None:intergenic 45.0%
!! GACAAAAGCATCAAAGCTGC+AGG - chr8.2:18320375-18320394 None:intergenic 45.0%
!! GAGAACATGAGAAGCATTGC+AGG + chr8.2:18321280-18321299 MS.gene51033:CDS 45.0%
!!! CCTCTTTTCGAGTGATTCTC+TGG - chr8.2:18321012-18321031 None:intergenic 45.0%
AGATTTCCCTGCGTCCTTCA+GGG + chr8.2:18320015-18320034 MS.gene51033:intron 50.0%
CAGTTTGCAGCAAGTGGAAG+AGG + chr8.2:18320766-18320785 MS.gene51033:CDS 50.0%
CATCACACTCCTTCAGAGGA+TGG + chr8.2:18321036-18321055 MS.gene51033:CDS 50.0%
GAAAAGGAAGCTGAAGCTCG+CGG + chr8.2:18320494-18320513 MS.gene51033:CDS 50.0%
GGATCAGAAGCAGATCCGTT+GGG - chr8.2:18320734-18320753 None:intergenic 50.0%
GGATCAGCAGCTTCTTCACT+TGG + chr8.2:18320256-18320275 MS.gene51033:CDS 50.0%
GGATCTGAACAAGGGGAGAT+TGG + chr8.2:18321411-18321430 MS.gene51033:CDS 50.0%
TAGATTTCCCTGCGTCCTTC+AGG + chr8.2:18320014-18320033 MS.gene51033:intron 50.0%
TCAAATGTGAGCTGGGCTGT+CGG + chr8.2:18320339-18320358 MS.gene51033:CDS 50.0%
TCTGCGGCGATCTTCAACTA+TGG - chr8.2:18321104-18321123 None:intergenic 50.0%
TGAAGGACGCAGGGAAATCT+AGG - chr8.2:18320015-18320034 None:intergenic 50.0%
TTGCCGGAGGATCTGAACAA+GGG + chr8.2:18321403-18321422 MS.gene51033:CDS 50.0%
! TAAAACCGGGAGTTGGTTGC+CGG + chr8.2:18321387-18321406 MS.gene51033:CDS 50.0%
!! GCCTGTCAGATAAAAGCGCT+TGG - chr8.2:18320880-18320899 None:intergenic 50.0%
AAGCAAACCCTGAAGGACGC+AGG - chr8.2:18320025-18320044 None:intergenic 55.0%
ACGGATCTGCTTCTGATCCC+TGG + chr8.2:18320735-18320754 MS.gene51033:CDS 55.0%
AGCAAACCCTGAAGGACGCA+GGG - chr8.2:18320024-18320043 None:intergenic 55.0%
CTCCCCTTGTTCAGATCCTC+CGG - chr8.2:18321409-18321428 None:intergenic 55.0%
CTCCTTCAGAGGATGGGCAT+TGG + chr8.2:18321043-18321062 MS.gene51033:CDS 55.0%
GACACTGTCATTCTGCACCG+TGG + chr8.2:18319744-18319763 MS.gene51033:CDS 55.0%
GGGATCAGAAGCAGATCCGT+TGG - chr8.2:18320735-18320754 None:intergenic 55.0%
GTGGCATCACACTCCTTCAG+AGG + chr8.2:18321032-18321051 MS.gene51033:CDS 55.0%
GTTGCCGGAGGATCTGAACA+AGG + chr8.2:18321402-18321421 MS.gene51033:CDS 55.0%
TCTACTATGCGGCCCATGCA+GGG + chr8.2:18321308-18321327 MS.gene51033:CDS 55.0%
TGAAGATCGCCGCAGAACTC+TGG + chr8.2:18321108-18321127 MS.gene51033:CDS 55.0%
TGCCAATGCCCATCCTCTGA+AGG - chr8.2:18321048-18321067 None:intergenic 55.0%
TGCCGGAGGATCTGAACAAG+GGG + chr8.2:18321404-18321423 MS.gene51033:CDS 55.0%
! CTGCACCGTGGCTTCCTTTT+TGG + chr8.2:18319756-18319775 MS.gene51033:CDS 55.0%
! GCTGATTCCTCAGCTGGCAT+TGG + chr8.2:18321195-18321214 MS.gene51033:CDS 55.0%
! TCTGTGGCTGATTCCTCAGC+TGG + chr8.2:18321189-18321208 MS.gene51033:CDS 55.0%
!! ATTCCTCAGCTGGCATTGGC+CGG + chr8.2:18321199-18321218 MS.gene51033:CDS 55.0%
!! GCGACCAAAAAAGGCATCGG+AGG - chr8.2:18319719-18319738 None:intergenic 55.0%
ATCCTCCGGCAACCAACTCC+CGG - chr8.2:18321395-18321414 None:intergenic 60.0%
CTACTATGCGGCCCATGCAG+GGG + chr8.2:18321309-18321328 MS.gene51033:CDS 60.0%
CTCTACTATGCGGCCCATGC+AGG + chr8.2:18321307-18321326 MS.gene51033:CDS 60.0%
TTTGCCACTCTGTGGGCCCT+TGG - chr8.2:18320119-18320138 None:intergenic 60.0%
! TGTGAGCTGGGCTGTCGGTT+TGG + chr8.2:18320344-18320363 MS.gene51033:CDS 60.0%
!! GTGAGCTGGGCTGTCGGTTT+GGG + chr8.2:18320345-18320364 MS.gene51033:CDS 60.0%
AGTCCGGCCAATGCCAGCTG+AGG - chr8.2:18321205-18321224 None:intergenic 65.0%
CATGCCAAGGGCCCACAGAG+TGG + chr8.2:18320112-18320131 MS.gene51033:CDS 65.0%
CTCTGTGGGCCCTTGGCATG+TGG - chr8.2:18320112-18320131 None:intergenic 65.0%
! AACCGGGAGTTGGTTGCCGG+AGG + chr8.2:18321390-18321409 MS.gene51033:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 18319333 18321591 18319333 ID=MS.gene51033
chr8.2 mRNA 18319333 18321591 18319333 ID=MS.gene51033.t1;Parent=MS.gene51033
chr8.2 exon 18319333 18319459 18319333 ID=MS.gene51033.t1.exon1;Parent=MS.gene51033.t1
chr8.2 CDS 18319333 18319459 18319333 ID=cds.MS.gene51033.t1;Parent=MS.gene51033.t1
chr8.2 exon 18319560 18319777 18319560 ID=MS.gene51033.t1.exon2;Parent=MS.gene51033.t1
chr8.2 CDS 18319560 18319777 18319560 ID=cds.MS.gene51033.t1;Parent=MS.gene51033.t1
chr8.2 exon 18320036 18320595 18320036 ID=MS.gene51033.t1.exon3;Parent=MS.gene51033.t1
chr8.2 CDS 18320036 18320595 18320036 ID=cds.MS.gene51033.t1;Parent=MS.gene51033.t1
chr8.2 exon 18320685 18321591 18320685 ID=MS.gene51033.t1.exon4;Parent=MS.gene51033.t1
chr8.2 CDS 18320685 18321591 18320685 ID=cds.MS.gene51033.t1;Parent=MS.gene51033.t1
Gene Sequence

>MS.gene51033

ATGAACCAAATGACAAATGGTGAGACTGTGGAGAATGAAGAGGTAAGTTTGCTGAAGAATGAAAATAGCGGAGATGATGGCCCTAAGATTAACTACAGGGGATGGAAGGTCATGCCCTTCATTATAGGTGAGCAAGACTTCAACGGCAGAATATTTTGTTTTTACTTGCTTCATTCTCGTCTGTTAATTTTCTTAATTCTTGAGTGATTCATTTTCGTGAATGACAGGAAATGAGATTTTTGAGAAGCTTGGAGCCATCGGCACTTTATCCAATCTATTGGTCTATCTTACTACAGTATTCAACTTGGAAAACATCGCAGCTACAAATATTATCAACATCTTTAACGGAAGTACCAACTTTGCAACATTGATAGGAGCTTTTTCCTCCGATGCCTTTTTTGGTCGCTACAAGACACTGTCATTCTGCACCGTGGCTTCCTTTTTGGTAAATTGCTATTTCCTGATGCATTCATCATTCAAATCCATTCCATTTTTTTTGTTGATAAACACAATGAAGTTAGGGATATCTAAATTTGGATAATATCAATGATATTGACAAGTATTAAACAAGATTTGCGATCATTGTCAATAGAAGTAATTCCATTTTAAAATGCATAACATAAAACTATCAATTTTTGTACTTTGACAAGCTTAGCTCATTTTAGTTGTGCCTCTGATTCCTAGATTTCCCTGCGTCCTTCAGGGTTTGCTTGTAATACAACTAACAGCAGCAGTCGAGAAGCTGCATCCACATCCATGTGAAGAATTAGAAAACACCACATGCCAAGGGCCCACAGAGTGGCAAATGACAGTTCTAAAGACTGGTTTAGGATTATTGATGGTAGGAGCTGCAGGGATCCGACCATGTAACTTAGCATTTGGAGCCGATCAGTTTAATCCCAACACAGAATCTGGGAAAAAGGGGATCAGCAGCTTCTTCACTTGGTACTATTTCACTTTCACTCTTGCTCAGATGATATCCTTAACAATTATTGTCTACATACAGTCAAATGTGAGCTGGGCTGTCGGTTTGGGAATTCCTGCAGCTTTGATGCTTTTGTCTTCTGTAATCTTCTTTATGGGGGCCAAATTGTATGTGAAAGTTAAACCAAGTGGTAGTCCCATAACTAGCATAGTGCAAGTTATTGTGGTTGCAACAAAGAAAAGGAAGCTGAAGCTCGCGGAATATCTATACCCTTCACTATTCAACTATGTACCTGCCAAGACAATGAATTCTAAACTTCCTTATACTTATCAATTCAGGTAAACAACACTAAGAAATTAGCATTTGGTGGTAGATATATCATATAATTATTTTCAATAGTGGTTTAAAGGATGCCTTGTATTGACAGGTTTCTTGACAAAGCGGCAATCATGACCCCACAAGATCAAATAAATCCCAACGGATCTGCTTCTGATCCCTGGAATCTATGCAGTTTGCAGCAAGTGGAAGAGGTCAAATGCTTGTTGAGAGTGTTACCCATATGGGTTTCAGCCGTTTTTTACTATGTTGTTATCGTCCAACAGCACACTATTTTAGTGTTCCAAGCGCTTTTATCTGACAGGCGCATTGGGCAAAGCAAGTTCATGATCCCAGGAGCATCCTACTATGTCTTTCTGATGATCAGTGTGGCAATTTGGTTGCCCATTTACGACCGAAAAGTTGTTCCTTTACTCCAGAGAATCACTCGAAAAGAGGGTGGCATCACACTCCTTCAGAGGATGGGCATTGGCATTTTTTTGGGTATACTCAGCATGCTAGTATCTGCCATAGTTGAAGATCGCCGCAGAACTCTGGCTCTTACTAAACCCTTAGAAGTGGAATCAAGAAAAGGTGCAATTTCATCAATGTCAGGTCTGTGGCTGATTCCTCAGCTGGCATTGGCCGGACTTGCTGAAGCATTCATGTCTGTTGCACAGATTGAATTTTACTATAAACAATTTCCTGAGAACATGAGAAGCATTGCAGGATCTCTCTACTATGCGGCCCATGCAGGGGCAAGTTATTTGAGTAGTATGCTGATTTCATCTATCCACCATATCACTGTCAAATCTAAAACCGGGAGTTGGTTGCCGGAGGATCTGAACAAGGGGAGATTGGATAACTTCTATCTCATCATTGCTGCTATAGAAATTGTAAATTTAGGCTGCTTTGTGTTATGTGCACAGTGGTATAGGTACAAAGAAACGGAAAACAGTTCAATCGAACTCGATAAAGTGATAAAACAATCTGAAAAAGATGGTAATGGTGTGAAATGA

Protein sequence

>MS.gene51033.t1

MNQMTNGETVENEEVSLLKNENSGDDGPKINYRGWKVMPFIIGNEIFEKLGAIGTLSNLLVYLTTVFNLENIAATNIINIFNGSTNFATLIGAFSSDAFFGRYKTLSFCTVASFLGLLVIQLTAAVEKLHPHPCEELENTTCQGPTEWQMTVLKTGLGLLMVGAAGIRPCNLAFGADQFNPNTESGKKGISSFFTWYYFTFTLAQMISLTIIVYIQSNVSWAVGLGIPAALMLLSSVIFFMGAKLYVKVKPSGSPITSIVQVIVVATKKRKLKLAEYLYPSLFNYVPAKTMNSKLPYTYQFRFLDKAAIMTPQDQINPNGSASDPWNLCSLQQVEEVKCLLRVLPIWVSAVFYYVVIVQQHTILVFQALLSDRRIGQSKFMIPGASYYVFLMISVAIWLPIYDRKVVPLLQRITRKEGGITLLQRMGIGIFLGILSMLVSAIVEDRRRTLALTKPLEVESRKGAISSMSGLWLIPQLALAGLAEAFMSVAQIEFYYKQFPENMRSIAGSLYYAAHAGASYLSSMLISSIHHITVKSKTGSWLPEDLNKGRLDNFYLIIAAIEIVNLGCFVLCAQWYRYKETENSSIELDKVIKQSEKDGNGVK