AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene46358

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46358.t1 MTR_4g098800 98.986 592 6 0 1 592 1 592 0.0 1209
MS.gene46358.t1 MTR_4g098800 97.504 601 6 1 1 592 57 657 0.0 1203
MS.gene46358.t1 MTR_5g014150 80.165 605 107 3 1 592 1 605 0.0 981
MS.gene46358.t1 MTR_7g010820 71.184 583 153 5 13 586 3 579 0.0 820
MS.gene46358.t1 MTR_1g116930 59.019 571 222 8 17 586 9 568 0.0 662
MS.gene46358.t1 MTR_7g005930 59.246 557 220 4 28 583 27 577 0.0 657
MS.gene46358.t1 MTR_7g013270 59.123 570 213 8 28 586 82 642 0.0 644
MS.gene46358.t1 MTR_3g462710 44.346 566 301 7 14 572 2 560 4.78e-160 470
MS.gene46358.t1 MTR_4g024930 46.140 570 273 8 13 575 13 555 9.62e-159 466
MS.gene46358.t1 MTR_4g015080 43.182 572 311 6 5 570 3 566 1.17e-157 464
MS.gene46358.t1 MTR_7g067010 42.832 565 309 5 15 573 3 559 2.34e-156 460
MS.gene46358.t1 MTR_7g098200 37.713 586 344 6 17 591 10 585 8.32e-144 429
MS.gene46358.t1 MTR_7g098160 38.062 578 339 5 4 572 1 568 1.19e-142 426
MS.gene46358.t1 MTR_7g098200 37.819 587 332 8 17 591 10 575 1.32e-139 418
MS.gene46358.t1 MTR_7g098040 37.197 578 344 5 4 572 2 569 5.27e-135 407
MS.gene46358.t1 MTR_3g112460 37.414 580 347 8 15 591 2 568 1.03e-134 405
MS.gene46358.t1 MTR_7g098090 37.842 584 337 8 4 572 1 573 1.98e-134 405
MS.gene46358.t1 MTR_1g075440 36.411 574 344 6 8 572 2 563 3.43e-133 402
MS.gene46358.t1 MTR_7g098180 37.743 567 331 7 17 572 12 567 4.81e-130 394
MS.gene46358.t1 MTR_1g042310 36.332 567 344 5 14 572 4 561 1.03e-129 393
MS.gene46358.t1 MTR_7g098230 36.131 548 329 6 55 591 45 582 1.07e-129 393
MS.gene46358.t1 MTR_5g012270 39.153 567 327 9 17 572 10 569 1.70e-129 392
MS.gene46358.t1 MTR_3g112470 36.960 579 349 8 15 590 2 567 4.06e-129 390
MS.gene46358.t1 MTR_5g012290 36.731 569 340 7 16 572 7 567 1.83e-126 384
MS.gene46358.t1 MTR_3g112450 35.924 579 359 6 15 591 2 570 4.68e-125 380
MS.gene46358.t1 MTR_7g098220 37.543 578 339 6 4 572 1 565 8.15e-125 380
MS.gene46358.t1 MTR_1g041815 36.299 562 342 4 18 572 9 561 4.19e-124 378
MS.gene46358.t1 MTR_3g069500 36.007 586 350 12 8 583 6 576 4.76e-123 375
MS.gene46358.t1 MTR_3g462710 43.516 455 243 7 125 572 4 451 5.58e-123 371
MS.gene46358.t1 MTR_1g041835 36.299 562 342 4 18 572 9 561 1.02e-121 372
MS.gene46358.t1 MTR_1g041875 35.370 540 339 4 18 556 11 541 1.06e-119 367
MS.gene46358.t1 MTR_1g042310 36.312 526 318 5 55 572 1 517 1.47e-119 365
MS.gene46358.t1 MTR_1g042310 36.312 526 318 5 55 572 8 524 2.37e-119 365
MS.gene46358.t1 MTR_4g114340 38.095 567 333 9 14 573 2 557 1.88e-118 363
MS.gene46358.t1 MTR_7g065080 35.103 584 355 12 13 591 7 571 1.85e-117 361
MS.gene46358.t1 MTR_3g069440 35.121 578 350 11 22 586 19 584 1.76e-116 358
MS.gene46358.t1 MTR_4g101380 36.380 569 347 8 15 572 6 570 1.10e-115 357
MS.gene46358.t1 MTR_7g098220 37.951 527 308 5 55 572 5 521 1.78e-114 352
MS.gene46358.t1 MTR_1g041885 36.111 504 312 4 55 557 1 495 3.11e-114 351
MS.gene46358.t1 MTR_3g072300 35.651 561 343 8 14 566 2 552 1.36e-113 351
MS.gene46358.t1 MTR_5g055000 35.088 570 353 7 34 592 16 579 7.19e-112 346
MS.gene46358.t1 MTR_3g005010 37.321 560 297 13 20 565 14 533 2.83e-111 343
MS.gene46358.t1 MTR_4g019580 33.048 584 374 10 8 585 9 581 6.76e-110 342
MS.gene46358.t1 MTR_7g098150 39.262 461 265 6 4 460 1 450 7.11e-110 338
MS.gene46358.t1 MTR_7g098200 37.006 481 280 7 122 591 3 471 1.44e-108 335
MS.gene46358.t1 MTR_5g085850 35.590 576 349 8 13 585 10 566 2.15e-107 335
MS.gene46358.t1 MTR_3g069420 33.333 600 369 14 4 586 1 586 2.59e-107 335
MS.gene46358.t1 MTR_4g033325 35.689 566 323 10 15 570 10 544 2.62e-107 334
MS.gene46358.t1 MTR_3g014790 34.526 559 324 10 30 572 12 544 1.66e-106 332
MS.gene46358.t1 MTR_4g107580 32.542 590 380 5 14 592 5 587 1.70e-105 330
MS.gene46358.t1 MTR_0294s0020 36.396 566 319 10 15 570 10 544 1.75e-105 329
MS.gene46358.t1 MTR_4g033330 35.829 561 314 11 14 557 2 533 3.27e-103 322
MS.gene46358.t1 MTR_2g005130 34.513 565 342 9 14 572 18 560 2.37e-102 322
MS.gene46358.t1 MTR_8g038880 34.331 568 334 9 36 588 20 563 8.33e-102 320
MS.gene46358.t1 MTR_4g033315 35.035 568 326 12 15 570 10 546 3.57e-100 315
MS.gene46358.t1 MTR_4g033310 35.035 568 326 12 15 570 10 546 3.57e-100 315
MS.gene46358.t1 MTR_4g033375 36.399 511 281 10 21 518 17 496 7.31e-100 313
MS.gene46358.t1 MTR_7g088790 33.512 561 358 9 21 572 14 568 1.46e-99 315
MS.gene46358.t1 MTR_4g107530 32.790 552 354 6 40 578 37 584 8.10e-99 313
MS.gene46358.t1 MTR_7g006540 33.162 585 356 12 25 583 51 626 1.49e-98 313
MS.gene46358.t1 MTR_7g088825 31.434 579 382 8 17 586 3 575 2.90e-98 311
MS.gene46358.t1 MTR_7g065080 34.531 501 305 11 95 591 3 484 1.81e-97 306
MS.gene46358.t1 MTR_2g017750 31.779 579 375 10 13 573 10 586 1.87e-97 310
MS.gene46358.t1 MTR_8g469310 33.155 561 365 5 14 566 4 562 3.29e-97 308
MS.gene46358.t1 MTR_5g038060 32.423 549 360 6 34 573 29 575 7.67e-97 308
MS.gene46358.t1 MTR_4g107510 30.450 578 388 5 8 573 7 582 1.39e-96 307
MS.gene46358.t1 MTR_8g469480 33.037 563 360 9 40 592 42 597 1.16e-95 305
MS.gene46358.t1 MTR_1g085090 31.453 585 362 11 13 591 4 555 1.32e-95 305
MS.gene46358.t1 MTR_4g033395 35.433 508 290 11 21 518 17 496 6.04e-95 300
MS.gene46358.t1 MTR_8g469470 30.944 572 375 7 14 573 16 579 1.38e-94 301
MS.gene46358.t1 MTR_7g111260 31.670 581 362 11 13 589 4 553 5.06e-94 300
MS.gene46358.t1 MTR_8g087780 33.211 545 348 7 17 546 2 545 7.85e-94 300
MS.gene46358.t1 MTR_7g088820 32.911 553 352 10 33 572 18 564 1.14e-93 299
MS.gene46358.t1 MTR_5g038380 32.574 571 354 9 22 573 14 572 1.25e-92 296
MS.gene46358.t1 MTR_5g038190 30.880 557 374 6 21 569 9 562 7.91e-92 294
MS.gene46358.t1 MTR_3g100980 30.756 569 365 8 30 585 10 562 8.92e-90 288
MS.gene46358.t1 MTR_7g088820 32.625 518 335 8 78 586 5 517 1.65e-89 286
MS.gene46358.t1 MTR_4g123537 32.668 551 355 7 26 573 31 568 1.99e-89 289
MS.gene46358.t1 MTR_4g107670 30.192 573 368 11 14 566 2 562 4.12e-87 282
MS.gene46358.t1 MTR_8g087810 33.159 573 366 8 17 573 2 573 8.83e-86 278
MS.gene46358.t1 MTR_4g033325 36.092 435 246 8 146 570 8 420 2.11e-84 270
MS.gene46358.t1 MTR_4g033325 36.706 425 239 8 156 570 42 446 3.92e-84 270
MS.gene46358.t1 MTR_3g100980 29.313 597 365 9 30 585 10 590 1.30e-83 273
MS.gene46358.t1 MTR_7g088820 33.261 460 292 9 122 572 1 454 6.26e-81 263
MS.gene46358.t1 MTR_4g107610 29.947 571 385 8 8 568 2 567 9.83e-80 263
MS.gene46358.t1 MTR_4g033385 35.529 425 247 9 156 570 40 447 1.97e-79 258
MS.gene46358.t1 MTR_1g026740 29.304 546 360 9 46 580 27 557 1.85e-78 259
MS.gene46358.t1 MTR_1g026750 30.142 564 366 9 34 585 16 563 1.26e-77 256
MS.gene46358.t1 MTR_8g103233 30.018 543 362 9 36 569 17 550 2.54e-77 256
MS.gene46358.t1 MTR_1g026770 29.529 552 360 10 46 585 25 559 3.71e-77 255
MS.gene46358.t1 MTR_7g064780 28.450 587 403 9 11 585 2 583 1.03e-75 252
MS.gene46358.t1 MTR_6g008690 30.741 553 327 11 45 574 16 535 1.15e-72 243
MS.gene46358.t1 MTR_7g098210 29.356 528 274 10 55 572 1 439 1.43e-70 234
MS.gene46358.t1 MTR_2g101640 28.652 534 364 9 46 569 33 559 3.81e-70 238
MS.gene46358.t1 MTR_1g057460 29.895 572 354 17 13 569 22 561 4.15e-70 237
MS.gene46358.t1 MTR_4g011280 28.623 552 374 10 46 586 42 584 5.76e-69 234
MS.gene46358.t1 MTR_2g101650 28.336 547 375 8 33 569 21 560 4.65e-68 232
MS.gene46358.t1 MTR_2g093160 29.247 571 373 13 21 583 1 548 5.35e-68 230
MS.gene46358.t1 MTR_2g101610 29.433 547 343 13 46 569 37 563 1.09e-67 232
MS.gene46358.t1 MTR_1g057460 31.185 481 303 13 95 569 32 490 1.25e-67 228
MS.gene46358.t1 MTR_2g093180 28.671 572 376 11 21 583 1 549 1.26e-67 229
MS.gene46358.t1 MTR_7g064800 28.620 594 403 10 9 589 4 589 3.76e-67 229
MS.gene46358.t1 MTR_2g093640 28.943 577 367 11 21 583 1 548 1.05e-66 227
MS.gene46358.t1 MTR_2g101590 28.801 559 355 13 34 569 24 562 9.35e-66 226
MS.gene46358.t1 MTR_1g009200 28.415 549 372 10 46 583 37 575 2.25e-64 222
MS.gene46358.t1 MTR_0236s0050 30.417 480 308 12 95 569 32 490 1.88e-63 217
MS.gene46358.t1 MTR_7g052600 30.199 553 346 12 22 572 11 525 1.45e-57 202
MS.gene46358.t1 MTR_2g101560 28.731 536 361 8 46 569 37 563 4.08e-57 203
MS.gene46358.t1 MTR_7g051830 29.181 562 358 11 13 572 2 525 2.83e-56 198
MS.gene46358.t1 MTR_7g051880 28.723 564 358 11 13 572 2 525 1.48e-54 194
MS.gene46358.t1 MTR_4g033310 37.091 275 155 5 304 570 218 482 2.16e-51 184
MS.gene46358.t1 MTR_4g033310 35.079 191 113 2 15 205 10 189 3.94e-28 118
MS.gene46358.t1 MTR_1g009170 23.881 402 243 12 163 554 9 357 2.33e-27 114
MS.gene46358.t1 MTR_3g065350 33.333 159 105 1 349 507 1 158 1.59e-25 103
MS.gene46358.t1 MTR_8g091265 33.333 129 83 3 308 433 3 131 1.28e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene46358.t1 AT1G32450 73.569 594 148 4 1 585 1 594 0.0 898
MS.gene46358.t1 AT4G21680 68.284 577 171 4 14 581 6 579 0.0 789
MS.gene46358.t1 AT5G19640 60.294 544 198 5 37 578 60 587 0.0 655
MS.gene46358.t1 AT3G54140 43.816 566 306 6 14 573 2 561 1.21e-168 492
MS.gene46358.t1 AT3G54140 43.816 566 306 6 14 573 2 561 1.21e-168 492
MS.gene46358.t1 AT2G02040 42.234 573 320 5 8 574 13 580 3.13e-160 471
MS.gene46358.t1 AT1G62200 43.013 551 307 5 22 570 38 583 8.51e-159 467
MS.gene46358.t1 AT1G62200 40.862 580 307 6 22 570 38 612 3.16e-152 451
MS.gene46358.t1 AT1G62200 40.862 580 307 6 22 570 52 626 6.75e-152 451
MS.gene46358.t1 AT5G01180 40.035 567 325 6 13 572 2 560 5.21e-148 439
MS.gene46358.t1 AT5G01180 40.035 567 325 6 13 572 2 560 5.21e-148 439
MS.gene46358.t1 AT5G01180 40.035 567 325 6 13 572 2 560 5.21e-148 439
MS.gene46358.t1 AT2G02020 40.175 570 288 9 4 566 11 534 5.65e-140 417
MS.gene46358.t1 AT2G26690 38.693 566 330 7 14 573 2 556 1.23e-124 379
MS.gene46358.t1 AT3G54450 37.279 566 316 9 33 583 9 550 2.37e-123 375
MS.gene46358.t1 AT5G46050 35.507 552 336 6 13 555 4 544 1.00e-120 369
MS.gene46358.t1 AT2G02020 36.842 570 286 11 4 566 11 513 3.60e-117 358
MS.gene46358.t1 AT5G46040 34.539 553 342 6 13 556 4 545 1.07e-115 356
MS.gene46358.t1 AT2G26690 39.238 525 302 7 55 573 10 523 6.36e-115 353
MS.gene46358.t1 AT2G26690 39.347 521 299 7 59 573 2 511 1.52e-114 352
MS.gene46358.t1 AT1G12110 36.395 588 355 9 13 588 5 585 2.04e-114 353
MS.gene46358.t1 AT2G37900 32.975 558 361 7 14 570 16 561 7.37e-112 346
MS.gene46358.t1 AT2G40460 36.170 564 336 7 14 569 2 549 3.10e-111 345
MS.gene46358.t1 AT5G13400 34.662 577 354 7 25 585 52 621 4.08e-109 340
MS.gene46358.t1 AT3G53960 32.977 561 363 7 14 569 15 567 7.15e-109 339
MS.gene46358.t1 AT1G69870 33.640 544 353 6 36 573 51 592 5.29e-106 332
MS.gene46358.t1 AT1G68570 34.349 591 366 9 4 585 1 578 5.41e-105 329
MS.gene46358.t1 AT3G21670 35.284 564 334 8 22 573 12 556 9.61e-104 325
MS.gene46358.t1 AT1G59740 34.075 584 366 12 8 584 13 584 1.02e-102 323
MS.gene46358.t1 AT1G68570 34.615 546 345 6 49 585 6 548 7.73e-101 317
MS.gene46358.t1 AT1G72140 34.103 563 318 8 24 570 22 547 9.73e-100 314
MS.gene46358.t1 AT1G22540 34.435 575 340 9 14 578 8 555 1.43e-97 308
MS.gene46358.t1 AT1G27080 35.484 558 345 10 36 588 14 561 2.80e-97 308
MS.gene46358.t1 AT1G72130 35.912 543 299 9 37 570 26 528 1.43e-96 305
MS.gene46358.t1 AT2G37900 32.657 493 319 7 79 570 2 482 8.77e-96 302
MS.gene46358.t1 AT1G72125 33.922 566 337 9 17 570 11 551 2.62e-93 297
MS.gene46358.t1 AT5G46050 36.795 443 258 7 122 555 3 432 5.57e-93 294
MS.gene46358.t1 AT1G72120 33.392 566 336 9 17 570 11 547 8.16e-92 293
MS.gene46358.t1 AT1G33440 33.391 575 361 10 5 572 8 567 1.38e-91 294
MS.gene46358.t1 AT1G27080 34.972 529 329 10 65 588 1 519 1.14e-90 290
MS.gene46358.t1 AT1G22550 33.217 575 330 11 18 570 12 554 1.77e-90 290
MS.gene46358.t1 AT1G69850 31.404 570 370 6 15 566 4 570 4.37e-90 290
MS.gene46358.t1 AT1G18880 30.906 563 371 6 40 589 23 580 8.89e-88 284
MS.gene46358.t1 AT1G22570 32.149 563 336 12 11 553 2 538 1.56e-87 283
MS.gene46358.t1 AT1G27040 30.195 563 370 6 22 575 9 557 2.47e-84 274
MS.gene46358.t1 AT5G62680 30.199 553 358 8 40 573 47 590 2.70e-84 275
MS.gene46358.t1 AT3G47960 30.254 552 357 8 40 573 65 606 3.05e-84 276
MS.gene46358.t1 AT1G27040 30.195 563 370 6 22 575 13 561 3.16e-84 274
MS.gene46358.t1 AT5G62730 29.342 593 356 9 2 566 19 576 2.16e-82 270
MS.gene46358.t1 AT1G22570 32.427 515 305 11 56 553 13 501 3.03e-82 268
MS.gene46358.t1 AT5G14940 30.716 573 325 15 45 586 16 547 5.61e-80 262
MS.gene46358.t1 AT3G45720 27.872 531 361 7 58 585 41 552 4.84e-79 260
MS.gene46358.t1 AT1G27040 30.394 533 348 6 52 575 11 529 2.18e-78 258
MS.gene46358.t1 AT3G45650 29.055 561 364 9 17 569 3 537 1.32e-77 256
MS.gene46358.t1 AT3G45710 27.385 566 390 8 28 591 13 559 3.04e-77 255
MS.gene46358.t1 AT1G72130 35.172 435 243 8 145 570 6 410 1.85e-76 249
MS.gene46358.t1 AT1G72130 35.172 435 243 8 145 570 6 410 1.85e-76 249
MS.gene46358.t1 AT3G45680 27.993 568 385 9 22 587 8 553 4.57e-76 252
MS.gene46358.t1 AT3G45660 28.007 582 384 10 12 585 19 573 5.27e-75 250
MS.gene46358.t1 AT5G62730 29.273 550 329 8 42 566 3 517 7.80e-75 248
MS.gene46358.t1 AT3G45660 28.648 562 366 10 32 585 18 552 1.18e-74 248
MS.gene46358.t1 AT3G45660 28.648 562 366 10 32 585 18 552 1.18e-74 248
MS.gene46358.t1 AT3G16180 29.264 557 367 12 30 569 16 562 1.70e-73 246
MS.gene46358.t1 AT1G52190 27.726 541 366 10 46 569 31 563 3.27e-73 246
MS.gene46358.t1 AT3G45650 27.939 587 363 10 17 569 3 563 7.10e-73 244
MS.gene46358.t1 AT3G25260 28.804 552 337 12 26 570 11 513 1.04e-69 234
MS.gene46358.t1 AT3G45700 25.887 564 388 11 26 586 5 541 1.59e-68 232
MS.gene46358.t1 AT3G01350 28.497 579 340 13 45 586 16 557 1.79e-68 232
MS.gene46358.t1 AT1G69860 30.297 538 359 9 40 573 22 547 1.34e-66 227
MS.gene46358.t1 AT3G45690 26.355 535 334 9 54 587 36 511 5.02e-63 216
MS.gene46358.t1 AT5G28470 26.306 536 387 5 34 565 15 546 8.80e-63 217
MS.gene46358.t1 AT5G28470 26.119 536 386 6 34 565 15 544 4.93e-60 209
MS.gene46358.t1 AT3G25280 27.907 559 339 15 26 570 11 519 4.87e-59 206
MS.gene46358.t1 AT5G11570 28.166 529 299 10 46 570 23 474 3.08e-55 194
MS.gene46358.t1 AT2G38100 25.048 519 329 17 64 565 2 477 1.09e-34 138
MS.gene46358.t1 AT2G38100 25.142 529 335 18 54 565 9 493 1.17e-34 138
MS.gene46358.t1 AT2G38100 25.142 529 335 18 54 565 15 499 1.34e-34 138

Find 118 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTATGGGCTCTTGGGTTT+TGG 0.139139 8.4:-24260538 MS.gene46358:CDS
GGTTTAAAGTGTCTATATTT+TGG 0.157297 8.4:+24260464 None:intergenic
CCAGATTTGGCTCTGTTTGC+TGG 0.157495 8.4:+24264831 None:intergenic
CTTTCCTTAGTGATTCTTAT+TGG 0.168379 8.4:-24261012 MS.gene46358:CDS
TACTAAGACTTCTTCCAATT+TGG 0.183807 8.4:-24259694 MS.gene46358:CDS
ACTTCTTCAACTTGAGTTAT+AGG 0.188333 8.4:+24259725 None:intergenic
CGGCTCCTTGCTCCACAAAA+AGG 0.208197 8.4:+24259627 None:intergenic
TTTCCTTAGTGATTCTTATT+GGG 0.235185 8.4:-24261011 MS.gene46358:CDS
ATTCCTCAGTATGCACTTAT+AGG 0.250210 8.4:-24259323 MS.gene46358:CDS
CTAGCAACCTTAGCATTCTT+TGG 0.277135 8.4:-24261151 MS.gene46358:CDS
TTTGCTGCCTCAAGGAAATT+AGG 0.280281 8.4:-24260404 MS.gene46358:CDS
TATAACTTCAAGAGATTTAG+AGG 0.282564 8.4:-24259786 MS.gene46358:CDS
CTGGAATAGTGGAATGTTAT+AGG 0.286030 8.4:-24259397 MS.gene46358:CDS
GTTTACATCTTCTCTCTTGT+TGG 0.299285 8.4:-24261037 MS.gene46358:CDS
CTTGACCCAACACCCTTGTT+AGG 0.319586 8.4:+24261104 None:intergenic
ATTATTGTGCAAAGCCAAAT+TGG 0.326777 8.4:+24259680 None:intergenic
TTTCCATTTCCACAACCTTT+TGG 0.329693 8.4:+24260800 None:intergenic
TGACCTCTATTCAAGTTTCC+AGG 0.340603 8.4:+24259116 None:intergenic
AGCAAACCATCTCCCAGATT+TGG 0.342083 8.4:+24264818 None:intergenic
TTGAGTGATCCTCATCAAAT+TGG 0.346545 8.4:+24260663 None:intergenic
AGAGATTTAGAGGTCCAAAA+AGG 0.353250 8.4:-24259776 MS.gene46358:CDS
ATCACCAATGGCTTGCTTAG+AGG 0.355045 8.4:-24265234 None:intergenic
CAACCAAACATTGCAACATT+TGG 0.355743 8.4:-24260692 MS.gene46358:CDS
ACAGAAGAGTTAACTCTTGA+TGG 0.370181 8.4:-24264876 MS.gene46358:CDS
CCTGATGGATTAAAGAGCTT+TGG 0.375184 8.4:-24259245 MS.gene46358:CDS
GGAACATTCAAGTTTGGAAA+TGG 0.377855 8.4:-24260765 MS.gene46358:CDS
ATGTGGGGAACATTCAAGTT+TGG 0.379230 8.4:-24260771 MS.gene46358:CDS
AGACCAAAAGGTTGTGGAAA+TGG 0.381408 8.4:-24260803 MS.gene46358:CDS
CCAGCAAACAGAGCCAAATC+TGG 0.383414 8.4:-24264831 MS.gene46358:CDS
CAGATTTGGCTCTGTTTGCT+GGG 0.386593 8.4:+24264832 None:intergenic
GCACCAAATGTTGCAATGTT+TGG 0.396893 8.4:+24260689 None:intergenic
AAAACATGTGCTATCTTTCA+AGG 0.405049 8.4:-24260980 MS.gene46358:CDS
GGAGTTCAAATGACATCAAA+TGG 0.414438 8.4:-24260383 MS.gene46358:CDS
CCAAAGCTCTTTAATCCATC+AGG 0.416164 8.4:+24259245 None:intergenic
GATGAAGGATTATGGGCTCT+TGG 0.416318 8.4:-24260545 MS.gene46358:CDS
TATCTGATTGCCTTAGGAAA+TGG 0.418849 8.4:-24260722 MS.gene46358:CDS
ATGAAGGATTATGGGCTCTT+GGG 0.420386 8.4:-24260544 MS.gene46358:CDS
CTGTTCCTAACAAGGGTGTT+GGG 0.423099 8.4:-24261109 MS.gene46358:CDS
CAAGCTCTCTAAGTATCTTC+TGG 0.428765 8.4:-24259349 MS.gene46358:CDS
ACCTTAGCATTCTTTGGCGT+TGG 0.435422 8.4:-24261145 MS.gene46358:CDS
TCTGTTCCTAACAAGGGTGT+TGG 0.436806 8.4:-24261110 MS.gene46358:CDS
CTCTTGATGGGAGTGTTGAT+TGG 0.437188 8.4:-24264863 MS.gene46358:CDS
TTCAATGCTCAAACACCTGA+TGG 0.444902 8.4:-24259260 MS.gene46358:CDS
CTTGCTTTGCTTAGACCAAA+AGG 0.446216 8.4:-24260815 MS.gene46358:CDS
GAACATTCAAGTTTGGAAAT+GGG 0.449440 8.4:-24260764 MS.gene46358:CDS
CTTGTATGTCACAGATGAAA+AGG 0.451621 8.4:-24260354 MS.gene46358:CDS
TCGAAGCTAGACATGCTTGC+TGG 0.451741 8.4:+24259569 None:intergenic
AGGCAATCAGATAGATTGAT+AGG 0.456678 8.4:+24260732 None:intergenic
GTGGTTTCAGAATATTCAAA+TGG 0.457484 8.4:-24259021 MS.gene46358:CDS
AAATCTGGGAGATGGTTTGC+TGG 0.458977 8.4:-24264816 MS.gene46358:CDS
AAGAAGTCAAAACAGCCAAT+AGG 0.459055 8.4:+24259075 None:intergenic
CTCACTGAACTTCAAAGAAT+GGG 0.463268 8.4:-24259458 MS.gene46358:CDS
TTGCTTAGACCAAAAGGTTG+TGG 0.464656 8.4:-24260809 MS.gene46358:CDS
GATTATACTTTGCAGCTACT+AGG 0.467336 8.4:+24258972 None:intergenic
TCAATCTATCTGATTGCCTT+AGG 0.469401 8.4:-24260728 MS.gene46358:CDS
TGAATAGAGGTCACTTGGAT+AGG 0.471177 8.4:-24259106 MS.gene46358:CDS
ACTCACTGAACTTCAAAGAA+TGG 0.482231 8.4:-24259459 MS.gene46358:CDS
TTCCTTAGTGATTCTTATTG+GGG 0.487486 8.4:-24261010 MS.gene46358:CDS
AAGTTTCCAGGGATCCATCC+TGG 0.501655 8.4:+24259128 None:intergenic
TTGAAGTTCAGTGAGTCCCT+TGG 0.502306 8.4:+24259466 None:intergenic
TCAACTGAAGATCACATGCC+AGG 0.517301 8.4:-24259146 MS.gene46358:CDS
TTGATACCCTCCATTTCCTA+AGG 0.519212 8.4:+24260712 None:intergenic
CACATGCCAGGATGGATCCC+TGG 0.519851 8.4:-24259134 MS.gene46358:CDS
ACTTGGCAGAATCTTGAAAG+AGG 0.521999 8.4:+24260431 None:intergenic
AAAGGAGAGTTATTCAAAAG+TGG 0.523525 8.4:-24260642 MS.gene46358:CDS
AACAATGTCAGCAAGTGGAC+TGG 0.527046 8.4:-24261064 MS.gene46358:CDS
GAACTTCAAAGAATGGGAAT+CGG 0.527583 8.4:-24259452 MS.gene46358:CDS
CTGATTGCCTTAGGAAATGG+AGG 0.529592 8.4:-24260719 MS.gene46358:CDS
ATAATCGCAATGGTTACAGC+TGG 0.529971 8.4:-24259416 MS.gene46358:CDS
AATGGTTACAGCTGGAATAG+TGG 0.536685 8.4:-24259408 MS.gene46358:CDS
CAGACCTCTAAGCAAGCCAT+TGG 0.536733 8.4:+24265230 None:intergenic
AAAGATACCATGGGTTATGT+TGG 0.537608 8.4:+24259750 None:intergenic
ACCTTGTTCTGTTCCTAACA+AGG 0.540490 8.4:-24261117 MS.gene46358:CDS
ATGCTAAGGTTGCTAGACCT+TGG 0.541001 8.4:+24261158 None:intergenic
TTCCCCAATAAGAATCACTA+AGG 0.545318 8.4:+24261008 None:intergenic
AAACTTGAATAGAGGTCACT+TGG 0.546503 8.4:-24259111 MS.gene46358:CDS
CAGCAAACAGAGCCAAATCT+GGG 0.549410 8.4:-24264830 MS.gene46358:CDS
CTGAAGATCACATGCCAGGA+TGG 0.554639 8.4:-24259142 MS.gene46358:CDS
TGCATGACAAGTATCTCACT+TGG 0.556372 8.4:-24259212 MS.gene46358:CDS
GACCTCTATTCAAGTTTCCA+GGG 0.557167 8.4:+24259117 None:intergenic
TGTGTGGAGAATCTTTCTGT+TGG 0.563547 8.4:+24260316 None:intergenic
CAGAAGAGTTAACTCTTGAT+GGG 0.565310 8.4:-24264875 MS.gene46358:CDS
TGCACTTATAGGAGCTTCTG+AGG 0.569295 8.4:-24259312 MS.gene46358:CDS
ACGGTAGAAGAAAATGAAGA+TGG 0.571774 8.4:+24259532 None:intergenic
CTTGAAAGAGGATTGCCACA+AGG 0.573760 8.4:+24260443 None:intergenic
GAAATGGAAAACTTGAATGT+GGG 0.577470 8.4:-24260787 MS.gene46358:CDS
CAAAGCAAGGTATGTTGTAA+CGG 0.578717 8.4:+24260829 None:intergenic
CTGCTAACAATGTCAGCAAG+TGG 0.580663 8.4:-24261069 MS.gene46358:CDS
TATAGACACTTTAAACCTTG+TGG 0.582951 8.4:-24260458 MS.gene46358:CDS
GTTATAGGACAAAGATACCA+TGG 0.583745 8.4:+24259740 None:intergenic
ATCCCTGGAAACTTGAATAG+AGG 0.584308 8.4:-24259119 MS.gene46358:CDS
CGTTATAGCTATAATCGCAA+TGG 0.587150 8.4:-24259426 MS.gene46358:CDS
ACAGAGCCAAATCTGGGAGA+TGG 0.590338 8.4:-24264824 MS.gene46358:CDS
GGAAATGGAAAACTTGAATG+TGG 0.600088 8.4:-24260788 MS.gene46358:CDS
CCCTTGTTAGGAACAGAACA+AGG 0.604046 8.4:+24261116 None:intergenic
CTTATATTGCATGTGCAAAG+TGG 0.617065 8.4:-24259040 MS.gene46358:CDS
CCTTGTTCTGTTCCTAACAA+GGG 0.618580 8.4:-24261116 MS.gene46358:CDS
GCATGACAAGTATCTCACTT+GGG 0.623076 8.4:-24259211 MS.gene46358:CDS
TCCAACGCCAAAGAATGCTA+AGG 0.630350 8.4:+24261144 None:intergenic
GATGGGAGTGTTGATTGGCA+TGG 0.632528 8.4:-24264858 MS.gene46358:CDS
CTTACTTGAAGCCGTGTGTG+TGG 0.633341 8.4:+24260300 None:intergenic
AGGCTTAAGTATGCAAAACA+AGG 0.635128 8.4:-24259377 MS.gene46358:CDS
TGGTGCTGACCAATTTGATG+AGG 0.636240 8.4:-24260672 MS.gene46358:CDS
TGTTTGAGAAAAGTGAACCA+AGG 0.638093 8.4:+24260588 None:intergenic
AGAAAGATTCTCCACACACA+CGG 0.639314 8.4:-24260311 MS.gene46358:CDS
ATTTGATGAGGATCACTCAA+AGG 0.639587 8.4:-24260660 MS.gene46358:CDS
AAGCTAGACATGCTTGCTGG+TGG 0.641340 8.4:+24259572 None:intergenic
AAGGAGGCCAACATAACCCA+TGG 0.645622 8.4:-24259757 MS.gene46358:CDS
TTGCTTAGAGGTCTGCAAAG+AGG 0.646487 8.4:-24265222 MS.gene46358:intron
TTATAGGACAAAGATACCAT+GGG 0.655311 8.4:+24259741 None:intergenic
TTGAACTCCTAATTTCCTTG+AGG 0.657668 8.4:+24260397 None:intergenic
CGAGTACTTGATCCACTCGT+CGG 0.670860 8.4:-24259509 MS.gene46358:CDS
AAATGAAGATGGCTACGCTG+AGG 0.695724 8.4:+24259543 None:intergenic
TTTGATCTACCAGTGAACCA+AGG 0.704810 8.4:-24261175 MS.gene46358:intron
AAATGGAAAACTTGAATGTG+GGG 0.708899 8.4:-24260786 MS.gene46358:CDS
CGAGTGGATCAAGTACTCGA+CGG 0.715679 8.4:+24259513 None:intergenic
TGATTGCCTTAGGAAATGGA+GGG 0.717908 8.4:-24260718 MS.gene46358:CDS
GCTCCTATAAGTGCATACTG+AGG 0.719671 8.4:+24259320 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTATTTTTTATTTTT+AGG - chr8.4:24260494-24260513 MS.gene46358:CDS 0.0%
!! AAATAATCCAAATTTATATT+TGG + chr8.4:24259543-24259562 None:intergenic 10.0%
!! AAATATTTAATTCATTAGAA+AGG + chr8.4:24262755-24262774 None:intergenic 10.0%
!! AATATTATATAGTTAAACTA+AGG - chr8.4:24259221-24259240 MS.gene46358:CDS 10.0%
!! AATATTTAATTCATTAGAAA+GGG + chr8.4:24262754-24262773 None:intergenic 10.0%
!! CATTCATATAATTATATATA+AGG + chr8.4:24261023-24261042 None:intergenic 10.0%
!! TAAAAAAAAATAACAATGTA+TGG - chr8.4:24262894-24262913 MS.gene46358:intron 10.0%
!! TTCCTATATATTATATATAA+GGG + chr8.4:24261097-24261116 None:intergenic 10.0%
!! TTTCCTATATATTATATATA+AGG + chr8.4:24261098-24261117 None:intergenic 10.0%
!!! AAATTCAAACATTTTAATTT+AGG + chr8.4:24262723-24262742 None:intergenic 10.0%
!!! TATTTTATTCATTTTAGATT+TGG - chr8.4:24261176-24261195 MS.gene46358:intron 10.0%
!!! TTTATTTTATTACATCAAAT+TGG - chr8.4:24259483-24259502 MS.gene46358:CDS 10.0%
!!! TTTATTTTTCTACTTTTTTT+TGG + chr8.4:24261154-24261173 None:intergenic 10.0%
!! ATTACTAATGTGTTTAATTA+TGG + chr8.4:24261473-24261492 None:intergenic 15.0%
!! TAGTAAGAAATTAATTAAAG+TGG + chr8.4:24263289-24263308 None:intergenic 15.0%
!! TCAATTCAAACATTAAAAAT+AGG + chr8.4:24261743-24261762 None:intergenic 15.0%
!! TCCTATATATTATATATAAG+GGG + chr8.4:24261096-24261115 None:intergenic 15.0%
!! TTACTAATGTGTTTAATTAT+GGG + chr8.4:24261472-24261491 None:intergenic 15.0%
!! TTGAATAACATATATGATTA+CGG + chr8.4:24260074-24260093 None:intergenic 15.0%
!! TTTGTCCTATATAAAATATT+AGG - chr8.4:24261689-24261708 MS.gene46358:intron 15.0%
!!! AACATTATATTTTAGAAACA+AGG + chr8.4:24259039-24259058 None:intergenic 15.0%
!!! ATATGGTTTTATTAATACAT+AGG + chr8.4:24259863-24259882 None:intergenic 15.0%
!!! CATTTTTTTGTTACTTTTTT+TGG + chr8.4:24260118-24260137 None:intergenic 15.0%
!!! GAAAAATATTTAACTTGATT+TGG + chr8.4:24262255-24262274 None:intergenic 15.0%
!!! GATATTTTAGATTTTTTTTG+TGG - chr8.4:24261946-24261965 MS.gene46358:intron 15.0%
!!! TAATTTGTTCATTTATGTTA+TGG - chr8.4:24263320-24263339 MS.gene46358:intron 15.0%
!!! TATGGTTTTATTAATACATA+GGG + chr8.4:24259862-24259881 None:intergenic 15.0%
!!! TCATACCTAATATTTTATAT+AGG + chr8.4:24261697-24261716 None:intergenic 15.0%
!!! TTCTATCACATATTATTTTT+TGG + chr8.4:24262659-24262678 None:intergenic 15.0%
!! AAAAAAATAACAATGTATGG+AGG - chr8.4:24262897-24262916 MS.gene46358:intron 20.0%
!! AAGAGTGAAATTCTATATTT+AGG - chr8.4:24260825-24260844 MS.gene46358:CDS 20.0%
!! AAGTAAATAGTGACAAAATT+TGG + chr8.4:24261529-24261548 None:intergenic 20.0%
!! AATCCACATCATATAAAATA+TGG + chr8.4:24259880-24259899 None:intergenic 20.0%
!! ACATAAAATATACAAGGTTT+GGG + chr8.4:24261988-24262007 None:intergenic 20.0%
!! ACTAAAAAAAAAAAGTTCCA+AGG - chr8.4:24264718-24264737 MS.gene46358:intron 20.0%
!! ATAGATGATAAATGGAAAAT+TGG + chr8.4:24264367-24264386 None:intergenic 20.0%
!! ATATAAGTCATAATTGCATT+TGG - chr8.4:24264315-24264334 MS.gene46358:intron 20.0%
!! ATATCAAATAGATAGCTTAT+TGG + chr8.4:24260013-24260032 None:intergenic 20.0%
!! ATATGGAAAAGTTGTATTTA+TGG + chr8.4:24259008-24259027 None:intergenic 20.0%
!! CACATATCCAAATATAAATT+TGG - chr8.4:24259533-24259552 MS.gene46358:CDS 20.0%
!! CATATATATGACTTAAGATA+GGG + chr8.4:24259781-24259800 None:intergenic 20.0%
!! CCTATATATTATATATAAGG+GGG + chr8.4:24261095-24261114 None:intergenic 20.0%
!! CTAAAAAAAAAAAGTTCCAA+GGG - chr8.4:24264719-24264738 MS.gene46358:intron 20.0%
!! GAAACAAGGAATAAATAATA+TGG + chr8.4:24259025-24259044 None:intergenic 20.0%
!! GACAATACATAAAATATACA+AGG + chr8.4:24261994-24262013 None:intergenic 20.0%
!! GTAATTAAACAATAGAACTT+CGG - chr8.4:24264244-24264263 MS.gene46358:intron 20.0%
!! TACATAAAATATACAAGGTT+TGG + chr8.4:24261989-24262008 None:intergenic 20.0%
!! TGAAGAAAAAAAAAGTTCAT+AGG - chr8.4:24262833-24262852 MS.gene46358:intron 20.0%
!! TTACATAAAACTTCTTTGTT+TGG + chr8.4:24259654-24259673 None:intergenic 20.0%
!!! AAACCATATTTTATATGATG+TGG - chr8.4:24259874-24259893 MS.gene46358:intron 20.0%
!!! AAATAAATTTAGGTTAAGAG+AGG - chr8.4:24262521-24262540 MS.gene46358:intron 20.0%
!!! AATAAATTTAGGTTAAGAGA+GGG - chr8.4:24262522-24262541 MS.gene46358:intron 20.0%
!!! AATTTTTATGTGTAGATGTT+TGG + chr8.4:24259432-24259451 None:intergenic 20.0%
!!! AGACTTTAATTTAGTAATGT+TGG + chr8.4:24259062-24259081 None:intergenic 20.0%
!!! ATTTTAGATTTTTTTTGTGG+TGG - chr8.4:24261949-24261968 MS.gene46358:intron 20.0%
!!! ATTTTTTAGCTACTTTTACT+TGG - chr8.4:24263583-24263602 MS.gene46358:intron 20.0%
!!! CAAGTTAAATATTTTTCCTT+TGG - chr8.4:24262258-24262277 MS.gene46358:intron 20.0%
!!! GTTTAAAGTGTCTATATTTT+GGG + chr8.4:24263739-24263758 None:intergenic 20.0%
!!! TCAAACATTTTAATTTAGGA+TGG + chr8.4:24262719-24262738 None:intergenic 20.0%
!!! TGTGTAGTTAATTTTTCAAA+AGG + chr8.4:24259693-24259712 None:intergenic 20.0%
!!! TTTAAAGTGTCTATATTTTG+GGG + chr8.4:24263738-24263757 None:intergenic 20.0%
!!! TTTGAAATTTGATAGTAACT+CGG - chr8.4:24261785-24261804 MS.gene46358:intron 20.0%
!!! TTTTTAGGTATTTGAATTGT+TGG - chr8.4:24260509-24260528 MS.gene46358:CDS 20.0%
! AAAAACAAGTCCTATTAGTT+AGG - chr8.4:24262317-24262336 MS.gene46358:intron 25.0%
! AATAAGGTTAAGAATATGGT+AGG - chr8.4:24261639-24261658 MS.gene46358:intron 25.0%
! AGACAGAAAATAGGAAAAAA+AGG - chr8.4:24260634-24260653 MS.gene46358:CDS 25.0%
! ATGTTATGGTTTGATATAAC+AGG - chr8.4:24263334-24263353 MS.gene46358:intron 25.0%
! ATTGCATATTCAATAATAGC+TGG + chr8.4:24260267-24260286 None:intergenic 25.0%
! CAAAAAGGAAAGAAAGTAAA+AGG - chr8.4:24260861-24260880 MS.gene46358:intron 25.0%
! CATAAAATATACAAGGTTTG+GGG + chr8.4:24261987-24262006 None:intergenic 25.0%
! CATACACTTTCATATACTTA+TGG - chr8.4:24260788-24260807 MS.gene46358:CDS 25.0%
! CCATATATATGACTTAAGAT+AGG + chr8.4:24259782-24259801 None:intergenic 25.0%
! CCCCCTTATATATAATATAT+AGG - chr8.4:24261092-24261111 MS.gene46358:CDS 25.0%
! CCTATCTTAAGTCATATATA+TGG - chr8.4:24259779-24259798 MS.gene46358:CDS 25.0%
! GAATATGCAATGCAATTAAT+CGG - chr8.4:24260276-24260295 MS.gene46358:intron 25.0%
! GTAAAAGGAAAGAATGTTTA+AGG - chr8.4:24260876-24260895 MS.gene46358:intron 25.0%
! TACCATATTCTTAACCTTAT+TGG + chr8.4:24261640-24261659 None:intergenic 25.0%
! TATAACTTCAAGAGATTTAG+AGG - chr8.4:24264415-24264434 MS.gene46358:intron 25.0%
! TGAACAAATATGGTGTAATT+TGG + chr8.4:24262595-24262614 None:intergenic 25.0%
! TGGACTCATAAAAATGAATA+TGG + chr8.4:24259821-24259840 None:intergenic 25.0%
! TGTTATGGTTTGATATAACA+GGG - chr8.4:24263335-24263354 MS.gene46358:intron 25.0%
! TTAGATCTTCTGAACAAATA+TGG + chr8.4:24262605-24262624 None:intergenic 25.0%
! TTGTTTAATTACTCTTTAGC+AGG + chr8.4:24264236-24264255 None:intergenic 25.0%
! TTTCAACATACATGTCAAAA+TGG + chr8.4:24259276-24259295 None:intergenic 25.0%
! TTTCCTTAGTGATTCTTATT+GGG - chr8.4:24263190-24263209 MS.gene46358:intron 25.0%
!! ACTTTTCTCAAACACAATTT+TGG - chr8.4:24263622-24263641 MS.gene46358:intron 25.0%
!! ATATTCTGTTTTCCATTGTT+TGG + chr8.4:24261358-24261377 None:intergenic 25.0%
!! CTTTTCTCAAACACAATTTT+GGG - chr8.4:24263623-24263642 MS.gene46358:intron 25.0%
!! TATTGTCATTTCATGGAATT+TGG - chr8.4:24261236-24261255 MS.gene46358:intron 25.0%
!! TGTTCTATCTAAAACCAAAA+CGG + chr8.4:24260550-24260569 None:intergenic 25.0%
!!! AAGATGATTTTTTGGTTGTT+TGG - chr8.4:24260930-24260949 MS.gene46358:intron 25.0%
!!! AATCAAACAGAGTTTTGTTT+TGG + chr8.4:24259120-24259139 None:intergenic 25.0%
!!! AGGAAAGTAAGATGATTTTT+TGG - chr8.4:24260922-24260941 MS.gene46358:intron 25.0%
!!! AGGACTTGTTTTTTTGTTTT+AGG + chr8.4:24262310-24262329 None:intergenic 25.0%
!!! ATTTTGAAGATGAAGGATTA+TGG - chr8.4:24263648-24263667 MS.gene46358:intron 25.0%
!!! GGTTTAAAGTGTCTATATTT+TGG + chr8.4:24263740-24263759 None:intergenic 25.0%
!!! GTGGATTAAGATTTTAAGTT+AGG - chr8.4:24259893-24259912 MS.gene46358:intron 25.0%
!!! TATTTTGAAACTGGAAATAG+TGG + chr8.4:24264609-24264628 None:intergenic 25.0%
!!! TGATCATAGTTTTGTAATCA+CGG - chr8.4:24259582-24259601 MS.gene46358:CDS 25.0%
!!! TTCTATATTTAGGCTTTGTT+TGG - chr8.4:24260835-24260854 MS.gene46358:CDS 25.0%
!!! TTTTGAAGATGAAGGATTAT+GGG - chr8.4:24263649-24263668 MS.gene46358:intron 25.0%
AAAACATGTGCTATCTTTCA+AGG - chr8.4:24263221-24263240 MS.gene46358:intron 30.0%
AAAGGAGAGTTATTCAAAAG+TGG - chr8.4:24263559-24263578 MS.gene46358:intron 30.0%
AAATGGAAAACTTGAATGTG+GGG - chr8.4:24263415-24263434 MS.gene46358:intron 30.0%
AACTAAGATATCAAAGGTGA+AGG - chr8.4:24262345-24262364 MS.gene46358:intron 30.0%
AATAAGATTAACCATGACGT+AGG - chr8.4:24260736-24260755 MS.gene46358:CDS 30.0%
ACTTCTTCAACTTGAGTTAT+AGG + chr8.4:24264479-24264498 None:intergenic 30.0%
ATAGGATTATTAAAGAGTCG+TGG - chr8.4:24260205-24260224 MS.gene46358:intron 30.0%
ATTATTGTGCAAAGCCAAAT+TGG + chr8.4:24264524-24264543 None:intergenic 30.0%
CACCAATAAGGTTAAGAATA+TGG - chr8.4:24261635-24261654 MS.gene46358:intron 30.0%
CAGATATATCCATATCCTAT+TGG - chr8.4:24259088-24259107 MS.gene46358:CDS 30.0%
CCATTTATCATCTATATTGC+AGG - chr8.4:24264372-24264391 MS.gene46358:intron 30.0%
CCTGCAATATAGATGATAAA+TGG + chr8.4:24264375-24264394 None:intergenic 30.0%
CTTTCCTTAGTGATTCTTAT+TGG - chr8.4:24263189-24263208 MS.gene46358:intron 30.0%
GAAACTATAAGGAAAGAAAG+TGG + chr8.4:24261401-24261420 None:intergenic 30.0%
GAAATGGAAAACTTGAATGT+GGG - chr8.4:24263414-24263433 MS.gene46358:intron 30.0%
GATGTAAGCAAGAACAAATT+AGG - chr8.4:24261042-24261061 MS.gene46358:CDS 30.0%
GATTGTGAAAAGAAAGTGAA+AGG - chr8.4:24260960-24260979 MS.gene46358:intron 30.0%
GTGGTTTCAGAATATTCAAA+TGG - chr8.4:24265180-24265199 MS.gene46358:intron 30.0%
TACTAAGACTTCTTCCAATT+TGG - chr8.4:24264507-24264526 MS.gene46358:intron 30.0%
TATAGACACTTTAAACCTTG+TGG - chr8.4:24263743-24263762 MS.gene46358:intron 30.0%
TATGTTGAAAACTTTGTGCA+GGG - chr8.4:24259286-24259305 MS.gene46358:CDS 30.0%
TATTCAATAATAGCTGGACA+AGG + chr8.4:24260261-24260280 None:intergenic 30.0%
TGAACTTAACTCAGTTAGTA+GGG + chr8.4:24262016-24262035 None:intergenic 30.0%
TTATAGGACAAAGATACCAT+GGG + chr8.4:24264463-24264482 None:intergenic 30.0%
TTCCTTAGTGATTCTTATTG+GGG - chr8.4:24263191-24263210 MS.gene46358:intron 30.0%
TTGGTTTCAGAGAAACTATA+AGG + chr8.4:24261412-24261431 None:intergenic 30.0%
! AAAAAGTACAAGAGCCAAAA+AGG + chr8.4:24263705-24263724 None:intergenic 30.0%
! GAACATTCAAGTTTGGAAAT+GGG - chr8.4:24263437-24263456 MS.gene46358:intron 30.0%
! TCATCTATATTGCAGGTTTT+TGG - chr8.4:24264379-24264398 MS.gene46358:intron 30.0%
! TCTTATTTGCAATTACGTGT+CGG + chr8.4:24260723-24260742 None:intergenic 30.0%
!! AACTCAATTTTAGTGCACTA+AGG + chr8.4:24261441-24261460 None:intergenic 30.0%
!! AAGGAAAGAAAGTTTTATGC+TGG + chr8.4:24261318-24261337 None:intergenic 30.0%
!! ACGTATAACTTGATGATGAT+AGG - chr8.4:24260187-24260206 MS.gene46358:intron 30.0%
!! ACTCAATTTTAGTGCACTAA+GGG + chr8.4:24261440-24261459 None:intergenic 30.0%
!! AGGAAAGAAAGTTTTATGCT+GGG + chr8.4:24261317-24261336 None:intergenic 30.0%
!! ATATTGCAGGTTTTTGGATA+GGG - chr8.4:24264385-24264404 MS.gene46358:intron 30.0%
!! TATATTGCAGGTTTTTGGAT+AGG - chr8.4:24264384-24264403 MS.gene46358:intron 30.0%
!! TCTGAGGTTTTTATGTATGT+AGG - chr8.4:24264905-24264924 MS.gene46358:intron 30.0%
!!! AGTGTTACTTAGGTCAATTT+TGG - chr8.4:24259924-24259943 MS.gene46358:intron 30.0%
!!! GACGACAACTTCAATTTTTT+TGG + chr8.4:24261073-24261092 None:intergenic 30.0%
AAAAAGTTCATAGGTGTTCG+TGG - chr8.4:24262842-24262861 MS.gene46358:intron 35.0%
AAAACATGCCTCAAAAGCAA+GGG - chr8.4:24261210-24261229 MS.gene46358:intron 35.0%
AAAAGTTCATAGGTGTTCGT+GGG - chr8.4:24262843-24262862 MS.gene46358:intron 35.0%
AAACTTGAATAGAGGTCACT+TGG - chr8.4:24265090-24265109 MS.gene46358:intron 35.0%
AAAGGTGAAGGACAGTTTAA+AGG - chr8.4:24262357-24262376 MS.gene46358:intron 35.0%
AAGAAGTCAAAACAGCCAAT+AGG + chr8.4:24265129-24265148 None:intergenic 35.0%
ACAGAAGAGTTAACTCTTGA+TGG - chr8.4:24259325-24259344 MS.gene46358:CDS 35.0%
ACGGTAGAAGAAAATGAAGA+TGG + chr8.4:24264672-24264691 None:intergenic 35.0%
ACTCACTGAACTTCAAAGAA+TGG - chr8.4:24264742-24264761 MS.gene46358:intron 35.0%
AGAGATTTAGAGGTCCAAAA+AGG - chr8.4:24264425-24264444 MS.gene46358:intron 35.0%
AGGCAATCAGATAGATTGAT+AGG + chr8.4:24263472-24263491 None:intergenic 35.0%
AGGCTTAAGTATGCAAAACA+AGG - chr8.4:24264824-24264843 MS.gene46358:CDS 35.0%
ATAAGCCACAATCTCATGTA+AGG - chr8.4:24261601-24261620 MS.gene46358:intron 35.0%
ATATGACTTAAGATAGGGTC+AGG + chr8.4:24259776-24259795 None:intergenic 35.0%
ATGTTGAAAACTTTGTGCAG+GGG - chr8.4:24259287-24259306 MS.gene46358:CDS 35.0%
ATTCCTCAGTATGCACTTAT+AGG - chr8.4:24264878-24264897 MS.gene46358:CDS 35.0%
ATTTGATGAGGATCACTCAA+AGG - chr8.4:24263541-24263560 MS.gene46358:intron 35.0%
CAAAGCAAGGTATGTTGTAA+CGG + chr8.4:24263375-24263394 None:intergenic 35.0%
CAACCAAACATTGCAACATT+TGG - chr8.4:24263509-24263528 MS.gene46358:intron 35.0%
CAAGGTTCTTGAATCTTCTA+CGG + chr8.4:24260243-24260262 None:intergenic 35.0%
CACCTTTGATATCTTAGTTC+TGG + chr8.4:24262344-24262363 None:intergenic 35.0%
CAGAAGAGTTAACTCTTGAT+GGG - chr8.4:24259326-24259345 MS.gene46358:CDS 35.0%
CGTTATAGCTATAATCGCAA+TGG - chr8.4:24264775-24264794 MS.gene46358:intron 35.0%
CTATAAGGAAAGAAAGTGGA+AGG + chr8.4:24261397-24261416 None:intergenic 35.0%
CTCACTGAACTTCAAAGAAT+GGG - chr8.4:24264743-24264762 MS.gene46358:intron 35.0%
CTGAATCCTTATAAAACGAC+AGG - chr8.4:24260611-24260630 MS.gene46358:CDS 35.0%
CTTATATTGCATGTGCAAAG+TGG - chr8.4:24265161-24265180 MS.gene46358:intron 35.0%
CTTGTATGTCACAGATGAAA+AGG - chr8.4:24263847-24263866 MS.gene46358:intron 35.0%
GAACTTCAAAGAATGGGAAT+CGG - chr8.4:24264749-24264768 MS.gene46358:intron 35.0%
GGAAATGGAAAACTTGAATG+TGG - chr8.4:24263413-24263432 MS.gene46358:intron 35.0%
GGAGTTCAAATGACATCAAA+TGG - chr8.4:24263818-24263837 MS.gene46358:intron 35.0%
GGTTAAGAATATGGTAGGTT+AGG - chr8.4:24261644-24261663 MS.gene46358:intron 35.0%
GGTTAGGATAGACTTTAGTA+AGG - chr8.4:24261660-24261679 MS.gene46358:intron 35.0%
GTAAGCAAGAACAAATTAGG+AGG - chr8.4:24261045-24261064 MS.gene46358:CDS 35.0%
GTATGTTGAAAACTTTGTGC+AGG - chr8.4:24259285-24259304 MS.gene46358:CDS 35.0%
GTCCAGAACTAAGATATCAA+AGG - chr8.4:24262339-24262358 MS.gene46358:intron 35.0%
GTGAACTTAACTCAGTTAGT+AGG + chr8.4:24262017-24262036 None:intergenic 35.0%
GTTATAGGACAAAGATACCA+TGG + chr8.4:24264464-24264483 None:intergenic 35.0%
GTTTAAGGAATGAAAGTGAG+TGG - chr8.4:24260891-24260910 MS.gene46358:intron 35.0%
GTTTACACTTCATAACTCTG+AGG - chr8.4:24263954-24263973 MS.gene46358:intron 35.0%
GTTTACATCTTCTCTCTTGT+TGG - chr8.4:24263164-24263183 MS.gene46358:intron 35.0%
TATCAGAGTCATACATACGT+AGG - chr8.4:24262395-24262414 MS.gene46358:intron 35.0%
TATCTGATTGCCTTAGGAAA+TGG - chr8.4:24263479-24263498 MS.gene46358:intron 35.0%
TATGCAATGCAATTAATCGG+TGG - chr8.4:24260279-24260298 MS.gene46358:intron 35.0%
TCAATCTATCTGATTGCCTT+AGG - chr8.4:24263473-24263492 MS.gene46358:intron 35.0%
TGCTAGTGATCAACAGAATT+TGG + chr8.4:24259156-24259175 None:intergenic 35.0%
TGTTTGAGAAAAGTGAACCA+AGG + chr8.4:24263616-24263635 None:intergenic 35.0%
TTCCCCAATAAGAATCACTA+AGG + chr8.4:24263196-24263215 None:intergenic 35.0%
TTCTTTCCTTACCTTATTCC+TGG - chr8.4:24261328-24261347 MS.gene46358:intron 35.0%
TTGAACTCCTAATTTCCTTG+AGG + chr8.4:24263807-24263826 None:intergenic 35.0%
TTGAGTGATCCTCATCAAAT+TGG + chr8.4:24263541-24263560 None:intergenic 35.0%
! AAAGATACCATGGGTTATGT+TGG + chr8.4:24264454-24264473 None:intergenic 35.0%
! CATTTTTATGAGTCCATGTG+TGG - chr8.4:24259825-24259844 MS.gene46358:intron 35.0%
! CTCAGTAGTTTTCACTCAAA+TGG - chr8.4:24264547-24264566 MS.gene46358:intron 35.0%
! CTGGAATAGTGGAATGTTAT+AGG - chr8.4:24264804-24264823 MS.gene46358:CDS 35.0%
! GGAAATAGTGGTTTTCATTG+CGG + chr8.4:24264597-24264616 None:intergenic 35.0%
! GGAACATTCAAGTTTGGAAA+TGG - chr8.4:24263436-24263455 MS.gene46358:intron 35.0%
! GGATAGGTTTTTCTTCCTAT+TGG - chr8.4:24265111-24265130 MS.gene46358:intron 35.0%
! TTTCCATTTCCACAACCTTT+TGG + chr8.4:24263404-24263423 None:intergenic 35.0%
!! AGATGAATTTTGAGTGTGCA+CGG - chr8.4:24260149-24260168 MS.gene46358:intron 35.0%
!! CGAGAGTATTTACAATTGGT+CGG + chr8.4:24262284-24262303 None:intergenic 35.0%
!! GTCTCGAGAGTATTTACAAT+TGG + chr8.4:24262288-24262307 None:intergenic 35.0%
!! TAGTTCTGGACCTAACTAAT+AGG + chr8.4:24262330-24262349 None:intergenic 35.0%
!! TGTAAACATCGACTCGTTAT+TGG + chr8.4:24263941-24263960 None:intergenic 35.0%
!! TTGGGCTATTTTGAAGATGA+AGG - chr8.4:24263641-24263660 MS.gene46358:intron 35.0%
!! TTTTACTTGGCATTGAACCT+TGG - chr8.4:24263596-24263615 MS.gene46358:intron 35.0%
!!! AACAGAGTTTTGTTTTGGTG+AGG + chr8.4:24259115-24259134 None:intergenic 35.0%
!!! GCTCTTGTACTTTTTCTTGT+TGG - chr8.4:24263710-24263729 MS.gene46358:intron 35.0%
!!! TTTTTTAGTTTTCCGACGAG+TGG + chr8.4:24264707-24264726 None:intergenic 35.0%
AACGACAGGAGACAGAAAAT+AGG - chr8.4:24260625-24260644 MS.gene46358:CDS 40.0%
AATGGTTACAGCTGGAATAG+TGG - chr8.4:24264793-24264812 MS.gene46358:intron 40.0%
ACCTTGTTCTGTTCCTAACA+AGG - chr8.4:24263084-24263103 MS.gene46358:intron 40.0%
ACTTGGCAGAATCTTGAAAG+AGG + chr8.4:24263773-24263792 None:intergenic 40.0%
AGAAAGATTCTCCACACACA+CGG - chr8.4:24263890-24263909 MS.gene46358:intron 40.0%
AGACCAAAAGGTTGTGGAAA+TGG - chr8.4:24263398-24263417 MS.gene46358:intron 40.0%
ATAATCGCAATGGTTACAGC+TGG - chr8.4:24264785-24264804 MS.gene46358:intron 40.0%
ATCCCTGGAAACTTGAATAG+AGG - chr8.4:24265082-24265101 MS.gene46358:intron 40.0%
ATCTCATGTAAGGCTAGTGA+AGG - chr8.4:24261611-24261630 MS.gene46358:intron 40.0%
ATGAAGGATTATGGGCTCTT+GGG - chr8.4:24263657-24263676 MS.gene46358:intron 40.0%
ATTCCTGGCAAACCAAACAA+TGG - chr8.4:24261343-24261362 MS.gene46358:intron 40.0%
ATTTACAATTGGTCGGCCAA+AGG + chr8.4:24262277-24262296 None:intergenic 40.0%
CAAGCTCTCTAAGTATCTTC+TGG - chr8.4:24264852-24264871 MS.gene46358:CDS 40.0%
CATCAAAAACCATTACGTCG+TGG - chr8.4:24264177-24264196 MS.gene46358:intron 40.0%
CATGTATGCATCATAACACG+TGG + chr8.4:24260768-24260787 None:intergenic 40.0%
CCAAAGCTCTTTAATCCATC+AGG + chr8.4:24264959-24264978 None:intergenic 40.0%
CCACATTTGAAAGGGACTTT+CGG + chr8.4:24264127-24264146 None:intergenic 40.0%
CCTTGTTCTGTTCCTAACAA+GGG - chr8.4:24263085-24263104 MS.gene46358:intron 40.0%
CTAACAAATCACCACTTGAG+TGG + chr8.4:24261861-24261880 None:intergenic 40.0%
CTAGCAACCTTAGCATTCTT+TGG - chr8.4:24263050-24263069 MS.gene46358:intron 40.0%
CTTCGGAAAATAATGAGACG+TGG - chr8.4:24264261-24264280 MS.gene46358:intron 40.0%
CTTGCTTTGCTTAGACCAAA+AGG - chr8.4:24263386-24263405 MS.gene46358:intron 40.0%
GAAAACATGCCTCAAAAGCA+AGG - chr8.4:24261209-24261228 MS.gene46358:intron 40.0%
GATTTAGAGGTCCAAAAAGG+AGG - chr8.4:24264428-24264447 MS.gene46358:intron 40.0%
GCACCAAATGTTGCAATGTT+TGG + chr8.4:24263515-24263534 None:intergenic 40.0%
GCATGACAAGTATCTCACTT+GGG - chr8.4:24264990-24265009 MS.gene46358:intron 40.0%
TACTTATGGACATGAGTGCA+AGG - chr8.4:24260802-24260821 MS.gene46358:CDS 40.0%
TGAATAGAGGTCACTTGGAT+AGG - chr8.4:24265095-24265114 MS.gene46358:intron 40.0%
TGATTGCCTTAGGAAATGGA+GGG - chr8.4:24263483-24263502 MS.gene46358:intron 40.0%
TGCATGACAAGTATCTCACT+TGG - chr8.4:24264989-24265008 MS.gene46358:intron 40.0%
TGTGTGGAGAATCTTTCTGT+TGG + chr8.4:24263888-24263907 None:intergenic 40.0%
TTCAATGCTCAAACACCTGA+TGG - chr8.4:24264941-24264960 MS.gene46358:intron 40.0%
TTGAGGCAGCAAAAAACACT+TGG + chr8.4:24263790-24263809 None:intergenic 40.0%
TTGATACCCTCCATTTCCTA+AGG + chr8.4:24263492-24263511 None:intergenic 40.0%
TTGCTTAGACCAAAAGGTTG+TGG - chr8.4:24263392-24263411 MS.gene46358:intron 40.0%
TTTGATCTACCAGTGAACCA+AGG - chr8.4:24263026-24263045 MS.gene46358:intron 40.0%
TTTGCTGCCTCAAGGAAATT+AGG - chr8.4:24263797-24263816 MS.gene46358:intron 40.0%
! AGGGCAGTATTGTCATTTCA+TGG - chr8.4:24261229-24261248 MS.gene46358:intron 40.0%
! ATGTGGGGAACATTCAAGTT+TGG - chr8.4:24263430-24263449 MS.gene46358:intron 40.0%
! ATTATGGGCTCTTGGGTTTT+GGG - chr8.4:24263664-24263683 MS.gene46358:intron 40.0%
! CGACGTAATGGTTTTTGATG+TGG + chr8.4:24264177-24264196 None:intergenic 40.0%
! CTTTTGGTCTAAGCAAAGCA+AGG + chr8.4:24263388-24263407 None:intergenic 40.0%
! GACCTCTATTCAAGTTTCCA+GGG + chr8.4:24265087-24265106 None:intergenic 40.0%
! GTGGGAAAGTTTTCCTATGT+GGG - chr8.4:24261290-24261309 MS.gene46358:intron 40.0%
! TCAAATGGCTTCCCTTTTTG+TGG - chr8.4:24264562-24264581 MS.gene46358:intron 40.0%
! TGACCTCTATTCAAGTTTCC+AGG + chr8.4:24265088-24265107 None:intergenic 40.0%
! TGATTCTTACTCGACCGTTT+TGG - chr8.4:24260533-24260552 MS.gene46358:CDS 40.0%
! TTTTCTTTGCACACGCGAAA+AGG + chr8.4:24262432-24262451 None:intergenic 40.0%
!! ACTAGCCTTACATGAGATTG+TGG + chr8.4:24261609-24261628 None:intergenic 40.0%
!! ATGAATTTTGAGTGTGCACG+GGG - chr8.4:24260151-24260170 MS.gene46358:intron 40.0%
!! CCTGATGGATTAAAGAGCTT+TGG - chr8.4:24264956-24264975 MS.gene46358:intron 40.0%
!! GATGAATTTTGAGTGTGCAC+GGG - chr8.4:24260150-24260169 MS.gene46358:intron 40.0%
!! GGCTTTGTTTGGATGCAAAA+AGG - chr8.4:24260846-24260865 MS.gene46358:CDS 40.0%
!! GGTCACAACTAGTGTTACTT+AGG - chr8.4:24259914-24259933 MS.gene46358:intron 40.0%
!! TGTTTGGTTTGCCAGGAATA+AGG + chr8.4:24261342-24261361 None:intergenic 40.0%
!! TTTCCATTGTTTGGTTTGCC+AGG + chr8.4:24261349-24261368 None:intergenic 40.0%
!!! AAGTGTTTTTTGCTGCCTCA+AGG - chr8.4:24263789-24263808 MS.gene46358:intron 40.0%
!!! CTGTCTCCTGTCGTTTTATA+AGG + chr8.4:24260620-24260639 None:intergenic 40.0%
!!! TGCTGGTGGTATTTTGAAAC+TGG + chr8.4:24264618-24264637 None:intergenic 40.0%
!!! TTGTTTTGGTGAGGTCCAAT+AGG + chr8.4:24259106-24259125 None:intergenic 40.0%
AAATGAAGATGGCTACGCTG+AGG + chr8.4:24264661-24264680 None:intergenic 45.0%
AACAATGTCAGCAAGTGGAC+TGG - chr8.4:24263137-24263156 MS.gene46358:intron 45.0%
AACCACAATGTAGGCCTCAT+CGG + chr8.4:24264150-24264169 None:intergenic 45.0%
ACCTTAGCATTCTTTGGCGT+TGG - chr8.4:24263056-24263075 MS.gene46358:intron 45.0%
ACTTTCCCACCTTGAATGCA+CGG + chr8.4:24261280-24261299 None:intergenic 45.0%
AGCAAACCATCTCCCAGATT+TGG + chr8.4:24259386-24259405 None:intergenic 45.0%
ATGAGGCCTACATTGTGGTT+TGG - chr8.4:24264150-24264169 MS.gene46358:intron 45.0%
ATGCTAAGGTTGCTAGACCT+TGG + chr8.4:24263046-24263065 None:intergenic 45.0%
CAATCTTGACCACGACGTAA+TGG + chr8.4:24264189-24264208 None:intergenic 45.0%
CAGCAAACAGAGCCAAATCT+GGG - chr8.4:24259371-24259390 MS.gene46358:CDS 45.0%
CATGTACATGTGCTCAAGTG+CGG - chr8.4:24262478-24262497 MS.gene46358:intron 45.0%
CCCTTGTTAGGAACAGAACA+AGG + chr8.4:24263088-24263107 None:intergenic 45.0%
CCGAAAGTCCCTTTCAAATG+TGG - chr8.4:24264124-24264143 MS.gene46358:intron 45.0%
CTCATCGGCCACATTTGAAA+GGG + chr8.4:24264135-24264154 None:intergenic 45.0%
CTGATTGCCTTAGGAAATGG+AGG - chr8.4:24263482-24263501 MS.gene46358:intron 45.0%
CTGCTAACAATGTCAGCAAG+TGG - chr8.4:24263132-24263151 MS.gene46358:intron 45.0%
CTTGAAAGAGGATTGCCACA+AGG + chr8.4:24263761-24263780 None:intergenic 45.0%
CTTGAATGCACGGAAAGGTT+GGG + chr8.4:24261270-24261289 None:intergenic 45.0%
GAAAGTGAGTGGAATGAGAG+AGG - chr8.4:24260902-24260921 MS.gene46358:intron 45.0%
GATGAAGGATTATGGGCTCT+TGG - chr8.4:24263656-24263675 MS.gene46358:intron 45.0%
GCTAGTGAAGGTCACCAATA+AGG - chr8.4:24261623-24261642 MS.gene46358:intron 45.0%
GCTCCTATAAGTGCATACTG+AGG + chr8.4:24264884-24264903 None:intergenic 45.0%
GGTTTGCCAGGAATAAGGTA+AGG + chr8.4:24261337-24261356 None:intergenic 45.0%
TAAGCTTTGCACCACTCAAG+TGG - chr8.4:24261847-24261866 MS.gene46358:intron 45.0%
TAGTGCACTAAGGGTCTGTT+TGG + chr8.4:24261431-24261450 None:intergenic 45.0%
TCAACTGAAGATCACATGCC+AGG - chr8.4:24265055-24265074 MS.gene46358:intron 45.0%
TCCAACGCCAAAGAATGCTA+AGG + chr8.4:24263060-24263079 None:intergenic 45.0%
TGCACTTATAGGAGCTTCTG+AGG - chr8.4:24264889-24264908 MS.gene46358:CDS 45.0%
TGGTGAGGTCCAATAGGATA+TGG + chr8.4:24259100-24259119 None:intergenic 45.0%
TGTGGTCCAAACCACAATGT+AGG + chr8.4:24264159-24264178 None:intergenic 45.0%
TTACGTCGTGGTCAAGATTG+TGG - chr8.4:24264189-24264208 MS.gene46358:intron 45.0%
TTGAAGTTCAGTGAGTCCCT+TGG + chr8.4:24264738-24264757 None:intergenic 45.0%
TTGAATGCACGGAAAGGTTG+GGG + chr8.4:24261269-24261288 None:intergenic 45.0%
TTGCTTAGAGGTCTGCAAAG+AGG - chr8.4:24258979-24258998 MS.gene46358:CDS 45.0%
TTTGCACACGCGAAAAGGTT+CGG + chr8.4:24262427-24262446 None:intergenic 45.0%
! AAATCTGGGAGATGGTTTGC+TGG - chr8.4:24259385-24259404 MS.gene46358:CDS 45.0%
! GATTATGGGCTCTTGGGTTT+TGG - chr8.4:24263663-24263682 MS.gene46358:intron 45.0%
! GGTGGGAAAGTTTTCCTATG+TGG - chr8.4:24261289-24261308 MS.gene46358:intron 45.0%
! TCTGTTCCTAACAAGGGTGT+TGG - chr8.4:24263091-24263110 MS.gene46358:intron 45.0%
! TTTTATGCTGGGACCCACAT+AGG + chr8.4:24261306-24261325 None:intergenic 45.0%
!! CAATACTGCCCTTGCTTTTG+AGG + chr8.4:24261221-24261240 None:intergenic 45.0%
!! CAGATTTGGCTCTGTTTGCT+GGG + chr8.4:24259372-24259391 None:intergenic 45.0%
!! CTCTTGATGGGAGTGTTGAT+TGG - chr8.4:24259338-24259357 MS.gene46358:CDS 45.0%
!! CTGTTCCTAACAAGGGTGTT+GGG - chr8.4:24263092-24263111 MS.gene46358:intron 45.0%
!! GGTTATGTTGGCCTCCTTTT+TGG + chr8.4:24264442-24264461 None:intergenic 45.0%
!! TGAATTTTGAGTGTGCACGG+GGG - chr8.4:24260152-24260171 MS.gene46358:intron 45.0%
!! TGGTGCTGACCAATTTGATG+AGG - chr8.4:24263529-24263548 MS.gene46358:intron 45.0%
!! ATTCATATAATTATATATAA+GGG + chr8.4:24261022-24261041 None:intergenic 5.0%
!! TATAATATTAAAATGTTTAT+GGG - chr8.4:24262098-24262117 MS.gene46358:intron 5.0%
!! TTATAAAAACAAATAAATTT+AGG - chr8.4:24262511-24262530 MS.gene46358:intron 5.0%
!! TTATAATATTAAAATGTTTA+TGG - chr8.4:24262097-24262116 MS.gene46358:intron 5.0%
AAGGAGGCCAACATAACCCA+TGG - chr8.4:24264444-24264463 MS.gene46358:intron 50.0%
AAGTTTCCAGGGATCCATCC+TGG + chr8.4:24265076-24265095 None:intergenic 50.0%
ACAGAGCCAAATCTGGGAGA+TGG - chr8.4:24259377-24259396 MS.gene46358:CDS 50.0%
ACCTTTCCGTGCATTCAAGG+TGG - chr8.4:24261271-24261290 MS.gene46358:intron 50.0%
CCAACCTTTCCGTGCATTCA+AGG - chr8.4:24261268-24261287 MS.gene46358:intron 50.0%
CCAGCAAACAGAGCCAAATC+TGG - chr8.4:24259370-24259389 MS.gene46358:CDS 50.0%
CCTCATCGGCCACATTTGAA+AGG + chr8.4:24264136-24264155 None:intergenic 50.0%
CCTTGAATGCACGGAAAGGT+TGG + chr8.4:24261271-24261290 None:intergenic 50.0%
CCTTTCAAATGTGGCCGATG+AGG - chr8.4:24264133-24264152 MS.gene46358:intron 50.0%
CCTTTCCGTGCATTCAAGGT+GGG - chr8.4:24261272-24261291 MS.gene46358:intron 50.0%
CGAGTACTTGATCCACTCGT+CGG - chr8.4:24264692-24264711 MS.gene46358:intron 50.0%
CGAGTGGATCAAGTACTCGA+CGG + chr8.4:24264691-24264710 None:intergenic 50.0%
CGTGGCAAATACCTACGTCA+TGG + chr8.4:24260750-24260769 None:intergenic 50.0%
CTGAAGATCACATGCCAGGA+TGG - chr8.4:24265059-24265078 MS.gene46358:intron 50.0%
CTTACTTGAAGCCGTGTGTG+TGG + chr8.4:24263904-24263923 None:intergenic 50.0%
CTTGACCCAACACCCTTGTT+AGG + chr8.4:24263100-24263119 None:intergenic 50.0%
GGACACACTTATGCCACACA+TGG + chr8.4:24259841-24259860 None:intergenic 50.0%
GGCTCCTTGCTCCACAAAAA+GGG + chr8.4:24264576-24264595 None:intergenic 50.0%
GTTGCTAGACCTTGGTTCAC+TGG + chr8.4:24263038-24263057 None:intergenic 50.0%
TCGAAGCTAGACATGCTTGC+TGG + chr8.4:24264635-24264654 None:intergenic 50.0%
! AAGCTAGACATGCTTGCTGG+TGG + chr8.4:24264632-24264651 None:intergenic 50.0%
! GCTTCCCTTTTTGTGGAGCA+AGG - chr8.4:24264569-24264588 MS.gene46358:intron 50.0%
! TTCTGCTGGGTCTGCCTTTT+TGG - chr8.4:24263688-24263707 MS.gene46358:intron 50.0%
!! CCAGATTTGGCTCTGTTTGC+TGG + chr8.4:24259373-24259392 None:intergenic 50.0%
!! GATGGGAGTGTTGATTGGCA+TGG - chr8.4:24259343-24259362 MS.gene46358:CDS 50.0%
!!! TTGGGTTTTGGGCTTCTGCT+GGG - chr8.4:24263675-24263694 MS.gene46358:intron 50.0%
CCCACCTTGAATGCACGGAA+AGG + chr8.4:24261275-24261294 None:intergenic 55.0%
CGGCTCCTTGCTCCACAAAA+AGG + chr8.4:24264577-24264596 None:intergenic 55.0%
!!! CTTGGGTTTTGGGCTTCTGC+TGG - chr8.4:24263674-24263693 MS.gene46358:intron 55.0%
CACATGCCAGGATGGATCCC+TGG - chr8.4:24265067-24265086 MS.gene46358:intron 60.0%
GGCCGATGAGGCCTACATTG+TGG - chr8.4:24264145-24264164 MS.gene46358:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 24258974 24265249 24258974 ID=MS.gene46358
chr8.4 mRNA 24258974 24265249 24258974 ID=MS.gene46358.t1;Parent=MS.gene46358
chr8.4 exon 24265223 24265249 24265223 ID=MS.gene46358.t1.exon1;Parent=MS.gene46358.t1
chr8.4 CDS 24265223 24265249 24265223 ID=cds.MS.gene46358.t1;Parent=MS.gene46358.t1
chr8.4 exon 24264802 24264916 24264802 ID=MS.gene46358.t1.exon2;Parent=MS.gene46358.t1
chr8.4 CDS 24264802 24264916 24264802 ID=cds.MS.gene46358.t1;Parent=MS.gene46358.t1
chr8.4 exon 24260967 24261184 24260967 ID=MS.gene46358.t1.exon3;Parent=MS.gene46358.t1
chr8.4 CDS 24260967 24261184 24260967 ID=cds.MS.gene46358.t1;Parent=MS.gene46358.t1
chr8.4 exon 24260305 24260867 24260305 ID=MS.gene46358.t1.exon4;Parent=MS.gene46358.t1
chr8.4 CDS 24260305 24260867 24260305 ID=cds.MS.gene46358.t1;Parent=MS.gene46358.t1
chr8.4 exon 24258974 24259829 24258974 ID=MS.gene46358.t1.exon5;Parent=MS.gene46358.t1
chr8.4 CDS 24258974 24259829 24258974 ID=cds.MS.gene46358.t1;Parent=MS.gene46358.t1
Gene Sequence

>MS.gene46358

ATGGCTTGCTTAGAGGTCTGCAAAGAGGTAACCATAAATACAACTTTTCCATATTATTTATTCCTTGTTTCTAAAATATAATGTTCCAACATTACTAAATTAAAGTCTAAAATACAGATATATCCATATCCTATTGGACCTCACCAAAACAAAACTCTGTTTGATTTTTGTTGACAAAACCAAATTCTGTTGATCACTAGCAATATACAGTTTTTGAGCATGCTCTTACAGCTTATTAAGTATTCAAAATATTATATAGTTAAACTAAGGATATCTTATAAGTTATAATTTAAATAGTGCCATTTTGACATGTATGTTGAAAACTTTGTGCAGGGGAAGTTCAAAGAAGAAACAGAAGAGTTAACTCTTGATGGGAGTGTTGATTGGCATGGTCGCCCAGCAAACAGAGCCAAATCTGGGAGATGGTTTGCTGGAACTATTATACTCTGTAAGTTCCAAACATCTACACATAAAAATTGCATGACAATTTTATTTTTGTTTCACTCTATTTTATTTTATTACATCAAATTGGTGTATTTGTATTTTTGCTACTTCTTATCACATATCCAAATATAAATTTGGATTATTTTTGTTTCAACTCTATTTTATGATCATAGTTTTGTAATCACGGAAGACTTTATCTCAAACAAATCTCTCTGAGATACTTGTTAAAGAAGCCAAACAAAGAAGTTTTATGTAAACAATAACATTTGTAGCCTTTTGAAAAATTAACTACACAATTTTTAATGTATTACTACTATATTTTATACATTAACAAGTGCTACAAAAATATTGTTATCCTGACCCTATCTTAAGTCATATATATGGCGCTTAATTTATAATACCATATTCATTTTTATGAGTCCATGTGTGGCATAAGTGTGTCCCTATGTATTAATAAAACCATATTTTATATGATGTGGATTAAGATTTTAAGTTAGGTCACAACTAGTGTTACTTAGGTCAATTTTGGTAGTATTTTAATGATTGATGTTAGTTTAAATTTCTAGACTCTTTTCAGCGTCTCTTAACTCATCCAATAAGCTATCTATTTGATATACATCTACTTCAATTAGTTTGTTTAAACAATGACTTAACCGTAATCATATATGTTATTCAAGTAAATACAAAATGTAATTTTCCAAAAAAAGTAACAAAAAAATGATTATATATATAGATGAATTTTGAGTGTGCACGGGGGAGTGATACGTCTACGTATAACTTGATGATGATAGGATTATTAAAGAGTCGTGGCAAATTTTAGAGCCGTAGAAGATTCAAGAACCTTGTCCAGCTATTATTGAATATGCAATGCAATTAATCGGTGGTTTATAGACTATGATAGCTTATCAGTACAAAAAGTGTGACTTTTTGTACACAAAAAAACAAACTATGATCTCTTGTTCATCTTATCAGTTTTCACATCTTAGAAAATTTTAAGAAAACGACAACTTTAATTAACACTACATCATGTGCTTCATTCAGTTCACATTTCACAATGAGCTATTATAGTTTTTATTTTTTTTTATTTTTTATTTTTAGGTATTTGAATTGTTGGCTGATTCTTACTCGACCGTTTTGGTTTTAGATAGAACAAAATAATGTACATATTACAAGAATAGAAGAAGATACAGATTCTGAATCCTTATAAAACGACAGGAGACAGAAAATAGGAAAAAAAGGAGAGATTGTTGTGTTGAGTGTAAAAATATTTGAGCATGCATTTGAGATTTGTATAAATAGTTGCCGACACGTAATTGCAAATAAGATTAACCATGACGTAGGTATTTGCCACGTGTTATGATGCATACATGCATACACTTTCATATACTTATGGACATGAGTGCAAGGAAGAGTGAAATTCTATATTTAGGCTTTGTTTGGATGCAAAAAGGAAAGAAAGTAAAAGGAAAGAATGTTTAAGGAATGAAAGTGAGTGGAATGAGAGAGGAAAGTAAGATGATTTTTTGGTTGTTTGGTATGAGTGATTGTGAAAAGAAAGTGAAAGGAAAGAATGATGTGTTTTTTATTGAATGTCATAAATACCCTTATATATAATTATATGAATGATGTAAGCAAGAACAAATTAGGAGGAGCCAAAAAAATTGAAGTTGTCGTCCCCCTTATATATAATATATAGGAAAGAATAAATTATTTTTATTAGAAAAAAAATAGAACCAAAAAAAAGTAGAAAAATAAACATATTTTATTCATTTTAGATTTGGTAAAACAAAAGAAAACATGCCTCAAAAGCAAGGGCAGTATTGTCATTTCATGGAATTTGGTATTCATCCCCAACCTTTCCGTGCATTCAAGGTGGGAAAGTTTTCCTATGTGGGTCCCAGCATAAAACTTTCTTTCCTTACCTTATTCCTGGCAAACCAAACAATGGAAAACAGAATATTCTTCAATCTTTCTCTCCTTCCACTTTCTTTCCTTATAGTTTCTCTGAAACCAAACAGACCCTTAGTGCACTAAAATTGAGTTGAAGACAGCCCATAATTAAACACATTAGTAATAGTAACACTAGCTTTTTTAGATACGACAATATTCCAAATTTTGTCACTATTTACTTTATCTTTTTTTCTCTATTAATTATTAAAAACAATTATGATAATGTTATAATTATAAGCCACAATCTCATGTAAGGCTAGTGAAGGTCACCAATAAGGTTAAGAATATGGTAGGTTAGGATAGACTTTAGTAAGGTCTTATTTTGTCCTATATAAAATATTAGGTATGAGTTTAGTCTATTAGTGTCATAAACCTATTTTTAATGTTTGAATTGACATTTTTAAAAGTATGACAAGATTTGAAATTTGATAGTAACTCGGTTTGAAAGTTTGTTTAAAAGCTTACGTCATAATTTATTTTAAGCTTTGCACCACTCAAGTGGTGATTTGTTAGATTTTGTAAATAGACTAACAATCTAATAAATCAACAAGATTAATTCTATTTTTTAGTAGTAACACGATATTTTAGATTTTTTTTGTGGTGGTCAGTGTTTGAACCCCAAACCTTGTATATTTTATGTATTGTCCCTACTAACTGAGTTAAGTTCACGATGACACAATCTTTTAGATGATTCAGCTTTACATGACATCTATTTAAATTATATTATATTTATAATATTAAAATGTTTATGGGTAATTTTATGATTTAACTCAACATACAAAATTTAATAAAATTTTCTTTCAAATTGAAGATGTCAAATTATCTGAGTTCTTAATTATTAGAATTTTTTTTAACTAATTCATAATCGTTCTGAAGATTCTTTACCAAATCAAGTTAAATATTTTTCCTTTGGCCGACCAATTGTAAATACTCTCGAGACCTAAAACAAAAAAACAAGTCCTATTAGTTAGGTCCAGAACTAAGATATCAAAGGTGAAGGACAGTTTAAAGGTCACAATCATAGACGTATCAGAGTCATACATACGTAGGATATTTCCGAACCTTTTCGCGTGTGCAAAGAAAAAGTACACAAAAACAACGTCGTGTGTGCATGTACATGTGCTCAAGTGCGGTTCATTTTTATTATAAAAACAAATAAATTTAGGTTAAGAGAGGGACATCTTAATATAATATCAATATGTTCTTAGAATTTTAGATATGAATCCAAATTACACCATATTTGTTCAGAAGATCTAACAAAAAAACGTGCTTGATTTTCATTTAAGCACCAAAAAATAATATGTGATAGAATTCTAGAAGATAAAATATTGTTTTCTTATTTATTTAGCCATCCTAAATTAAAATGTTTGAATTTATAATTTACCCTTTCTAATGAATTAAATATTTTCATATGAAAATACAATATTTTAGTTATAAAAAATTTATAATTGAATTTTATAATTCATGAAGAAAAAAAAAGTTCATAGGTGTTCGTGGGTATATTAGACAAGTAAGTTTATTTTTTTTAAAAAAAAATAACAATGTATGGAGGAAGTTGATTTCAATTTGTAGAAGAACTTGTTATTTAAGATAAAAATATTTTTTGATGAAGATATAAATATTTTATGATGCTAACAATCTTTAATGTTGTTGATATATTTGATCTACCAGTGAACCAAGGTCTAGCAACCTTAGCATTCTTTGGCGTTGGAGTGAACCTTGTTCTGTTCCTAACAAGGGTGTTGGGTCAAGATAATGCTGCTGCTGCTAACAATGTCAGCAAGTGGACTGGCACAGTTTACATCTTCTCTCTTGTTGGTGCTTTCCTTAGTGATTCTTATTGGGGAAGATACAAAACATGTGCTATCTTTCAAGGCATTTTTGTAACTGTAAGTAATATACTTTCAATTTCATTTTTCCACTTTAATTAATTTCTTACTAGTACATTATATTAATTTGTTCATTTATGTTATGGTTTGATATAACAGGGTCTAGTATCTTTGTCCGTTACAACATACCTTGCTTTGCTTAGACCAAAAGGTTGTGGAAATGGAAAACTTGAATGTGGGGAACATTCAAGTTTGGAAATGGGAATGTTCTACCTATCAATCTATCTGATTGCCTTAGGAAATGGAGGGTATCAACCAAACATTGCAACATTTGGTGCTGACCAATTTGATGAGGATCACTCAAAGGAGAGTTATTCAAAAGTGGCATTTTTTAGCTACTTTTACTTGGCATTGAACCTTGGTTCACTTTTCTCAAACACAATTTTGGGCTATTTTGAAGATGAAGGATTATGGGCTCTTGGGTTTTGGGCTTCTGCTGGGTCTGCCTTTTTGGCTCTTGTACTTTTTCTTGTTGGCACCCCAAAATATAGACACTTTAAACCTTGTGGCAATCCTCTTTCAAGATTCTGCCAAGTGTTTTTTGCTGCCTCAAGGAAATTAGGAGTTCAAATGACATCAAATGGAGATGACTTGTATGTCACAGATGAAAAGGAGTCTTCTAACAACTCCAACAGAAAGATTCTCCACACACACGGCTTCAAGTAAGTTATTTGAATATTTCCAATAACGAGTCGATGTTTACACTTCATAACTCTGAGGCTGCATATATTGCTTCTACTGTATTTATGTAGTGATCATTTTGCTTATAATAATGCGACTTCATGATTCTTCACTTAAAAGAAAAAGTTCATATAAAATTGTAGATGTTAACGAAAGAGCAAAGTTGCATCGTGATTATTGATATTGCCGAAAGTCCCTTTCAAATGTGGCCGATGAGGCCTACATTGTGGTTTGGACCACATCAAAAACCATTACGTCGTGGTCAAGATTGTGGTCGCAGACTTTTATTTAAAATCCTGCTAAAGAGTAATTAAACAATAGAACTTCGGAAAATAATGAGACGTGGAAGATAAGATTCTTTTTATATTTCTTCTTACATATAAGTCATAATTGCATTTGGAGAAGTTCATATAGAGTGCTTATTGACCAATTTTCCATTTATCATCTATATTGCAGGTTTTTGGATAGGGCAGCTTATATAACTTCAAGAGATTTAGAGGTCCAAAAAGGAGGCCAACATAACCCATGGTATCTTTGTCCTATAACTCAAGTTGAAGAAGTAAAATGCATACTAAGACTTCTTCCAATTTGGCTTTGCACAATAATCTACTCAGTAGTTTTCACTCAAATGGCTTCCCTTTTTGTGGAGCAAGGAGCCGCAATGAAAACCACTATTTCCAGTTTCAAAATACCACCAGCAAGCATGTCTAGCTTCGACATCCTCAGCGTAGCCATCTTCATTTTCTTCTACCGTCGAGTACTTGATCCACTCGTCGGAAAACTAAAAAAAAAAAGTTCCAAGGGACTCACTGAACTTCAAAGAATGGGAATCGGTCTCGTTATAGCTATAATCGCAATGGTTACAGCTGGAATAGTGGAATGTTATAGGCTTAAGTATGCAAAACAAGGTGACACAAGCTCTCTAAGTATCTTCTGGCAAATTCCTCAGTATGCACTTATAGGAGCTTCTGAGGTTTTTATGTATGTAGGACAATTAGAATTCTTCAATGCTCAAACACCTGATGGATTAAAGAGCTTTGGAAGTGCACTTTGCATGACAAGTATCTCACTTGGGAACTATGTGAGTAGCTTAATTGTTAGTATTGTTATGAAGATTTCAACTGAAGATCACATGCCAGGATGGATCCCTGGAAACTTGAATAGAGGTCACTTGGATAGGTTTTTCTTCCTATTGGCTGTTTTGACTTCTTTAGATTTGATTGCTTATATTGCATGTGCAAAGTGGTTTCAGAATATTCAAATGGAATGCAAATATGATAACAATGATGAGCCTAGTAGCTGCAAAGTATAA
Protein sequence

>MS.gene46358.t1

MACLEVCKEGKFKEETEELTLDGSVDWHGRPANRAKSGRWFAGTIILLNQGLATLAFFGVGVNLVLFLTRVLGQDNAAAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQGIFVTGLVSLSVTTYLALLRPKGCGNGKLECGEHSSLEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEDHSKESYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWALGFWASAGSAFLALVLFLVGTPKYRHFKPCGNPLSRFCQVFFAASRKLGVQMTSNGDDLYVTDEKESSNNSNRKILHTHGFKFLDRAAYITSRDLEVQKGGQHNPWYLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISSFKIPPASMSSFDILSVAIFIFFYRRVLDPLVGKLKKKSSKGLTELQRMGIGLVIAIIAMVTAGIVECYRLKYAKQGDTSSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLIVSIVMKISTEDHMPGWIPGNLNRGHLDRFFFLLAVLTSLDLIAYIACAKWFQNIQMECKYDNNDEPSSCKV