AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08380.t1 MTR_3g462710 65.018 566 193 4 21 584 2 564 0.0 753
MS.gene08380.t1 MTR_7g067010 63.298 564 202 5 22 584 3 562 0.0 740
MS.gene08380.t1 MTR_4g015080 62.324 568 209 5 20 586 11 574 0.0 736
MS.gene08380.t1 MTR_3g462710 65.721 458 152 4 129 584 1 455 0.0 599
MS.gene08380.t1 MTR_7g098200 45.878 558 290 3 26 578 12 562 0.0 535
MS.gene08380.t1 MTR_3g112460 46.914 567 286 5 22 586 2 555 0.0 531
MS.gene08380.t1 MTR_1g075440 45.645 574 296 5 12 580 1 563 0.0 531
MS.gene08380.t1 MTR_7g098160 46.786 560 286 5 26 580 16 568 0.0 530
MS.gene08380.t1 MTR_7g098040 47.143 560 284 5 26 580 17 569 0.0 525
MS.gene08380.t1 MTR_7g098180 45.884 571 296 5 14 578 2 565 0.0 524
MS.gene08380.t1 MTR_7g098200 45.699 558 281 5 26 578 12 552 2.47e-180 522
MS.gene08380.t1 MTR_7g098090 46.903 565 283 6 26 580 16 573 8.39e-179 519
MS.gene08380.t1 MTR_1g041815 45.455 572 298 3 12 580 1 561 5.89e-178 516
MS.gene08380.t1 MTR_3g112470 45.855 567 292 5 22 586 2 555 1.13e-177 514
MS.gene08380.t1 MTR_1g041835 45.105 572 300 3 12 580 1 561 1.21e-177 515
MS.gene08380.t1 MTR_1g042310 43.694 563 309 3 21 580 4 561 1.37e-173 505
MS.gene08380.t1 MTR_5g014150 44.092 567 311 4 20 581 21 586 7.65e-173 503
MS.gene08380.t1 MTR_7g098220 46.032 567 291 5 19 580 9 565 8.34e-173 503
MS.gene08380.t1 MTR_3g112450 45.989 561 286 6 29 585 9 556 4.45e-171 498
MS.gene08380.t1 MTR_3g072300 43.310 568 315 4 21 586 2 564 1.38e-169 494
MS.gene08380.t1 MTR_7g098230 46.617 532 272 5 52 578 35 559 1.95e-169 494
MS.gene08380.t1 MTR_4g098800 43.739 567 308 4 21 582 14 574 2.19e-167 489
MS.gene08380.t1 MTR_7g010820 44.056 572 311 5 20 584 3 572 1.02e-166 487
MS.gene08380.t1 MTR_1g041875 43.438 541 291 3 26 563 12 540 1.46e-166 486
MS.gene08380.t1 MTR_4g098800 43.739 567 308 4 21 582 79 639 1.77e-166 489
MS.gene08380.t1 MTR_5g055000 42.960 554 310 5 35 584 10 561 1.80e-166 486
MS.gene08380.t1 MTR_7g005930 43.173 542 298 4 42 581 34 567 2.12e-163 479
MS.gene08380.t1 MTR_1g116930 42.463 544 301 6 41 581 21 555 1.61e-158 466
MS.gene08380.t1 MTR_5g012290 43.885 556 305 4 33 583 17 570 6.89e-158 465
MS.gene08380.t1 MTR_1g042310 43.130 524 290 3 60 580 6 524 1.11e-157 463
MS.gene08380.t1 MTR_3g069420 42.531 569 310 9 20 583 13 569 8.58e-157 462
MS.gene08380.t1 MTR_3g005010 43.206 574 287 9 20 586 5 546 1.46e-156 460
MS.gene08380.t1 MTR_7g098220 45.627 526 274 4 60 580 3 521 2.66e-156 459
MS.gene08380.t1 MTR_1g042310 42.912 522 290 3 62 580 1 517 6.39e-156 458
MS.gene08380.t1 MTR_3g069500 42.580 566 308 7 19 583 11 560 1.89e-155 458
MS.gene08380.t1 MTR_7g088825 40.669 568 328 7 21 583 2 565 1.39e-154 457
MS.gene08380.t1 MTR_5g012270 43.440 564 304 9 33 586 19 577 2.99e-154 455
MS.gene08380.t1 MTR_7g013270 42.754 552 302 6 35 581 82 624 1.62e-153 456
MS.gene08380.t1 MTR_4g033325 42.629 563 293 8 22 580 10 546 2.31e-152 449
MS.gene08380.t1 MTR_7g088790 39.821 560 330 6 29 583 15 572 1.50e-151 449
MS.gene08380.t1 MTR_7g088820 39.085 568 328 8 13 575 6 560 1.74e-151 448
MS.gene08380.t1 MTR_1g041885 42.717 508 276 3 62 566 1 496 3.87e-151 446
MS.gene08380.t1 MTR_4g101380 44.227 563 296 9 33 583 17 573 1.28e-150 446
MS.gene08380.t1 MTR_7g065080 40.830 578 322 8 12 586 1 561 1.84e-150 446
MS.gene08380.t1 MTR_0294s0020 42.606 568 286 9 22 580 10 546 2.43e-150 444
MS.gene08380.t1 MTR_3g069440 42.729 557 310 7 29 583 19 568 5.78e-149 442
MS.gene08380.t1 MTR_4g033315 41.385 563 302 7 22 580 10 548 7.76e-149 441
MS.gene08380.t1 MTR_4g033310 41.385 563 302 7 22 580 10 548 7.76e-149 441
MS.gene08380.t1 MTR_7g098150 47.788 452 224 5 26 472 16 460 2.24e-147 434
MS.gene08380.t1 MTR_4g019580 40.422 569 325 8 20 585 14 571 2.30e-146 435
MS.gene08380.t1 MTR_4g033330 42.259 549 287 9 22 565 10 533 2.71e-143 425
MS.gene08380.t1 MTR_5g085850 41.536 573 311 5 16 583 3 556 6.81e-142 424
MS.gene08380.t1 MTR_7g006540 39.116 588 330 10 18 583 31 612 1.42e-139 419
MS.gene08380.t1 MTR_4g114340 41.373 568 320 5 21 584 2 560 3.63e-138 414
MS.gene08380.t1 MTR_8g038880 41.166 549 295 8 45 584 22 551 4.29e-138 413
MS.gene08380.t1 MTR_2g017750 39.206 579 333 10 22 583 12 588 8.50e-138 414
MS.gene08380.t1 MTR_5g038060 39.209 556 318 7 41 583 29 577 1.13e-136 411
MS.gene08380.t1 MTR_7g088820 39.839 497 292 6 84 575 4 498 1.17e-136 408
MS.gene08380.t1 MTR_4g033395 42.043 509 258 10 29 528 18 498 7.29e-135 402
MS.gene08380.t1 MTR_4g033375 41.386 505 267 7 29 528 18 498 4.24e-134 400
MS.gene08380.t1 MTR_3g014790 39.646 565 311 8 29 584 5 548 6.90e-133 400
MS.gene08380.t1 MTR_7g098200 42.637 455 249 3 129 578 1 448 2.62e-132 395
MS.gene08380.t1 MTR_4g107670 37.500 584 334 9 21 585 2 573 4.28e-132 398
MS.gene08380.t1 MTR_8g087780 39.613 568 330 7 29 583 7 574 5.90e-131 395
MS.gene08380.t1 MTR_4g107580 37.230 556 330 7 42 583 23 573 1.45e-130 395
MS.gene08380.t1 MTR_8g469480 37.636 550 323 8 47 583 42 584 7.45e-130 393
MS.gene08380.t1 MTR_3g100980 37.004 554 329 5 37 583 10 550 2.58e-128 388
MS.gene08380.t1 MTR_4g107510 34.465 589 366 6 5 584 8 585 5.30e-128 388
MS.gene08380.t1 MTR_5g038380 36.788 579 350 7 16 583 1 574 2.36e-125 381
MS.gene08380.t1 MTR_8g469470 34.708 582 357 6 17 586 14 584 2.53e-124 379
MS.gene08380.t1 MTR_2g005130 38.600 557 315 8 29 580 26 560 1.90e-123 376
MS.gene08380.t1 MTR_4g107530 35.849 583 346 9 18 584 12 582 8.42e-123 375
MS.gene08380.t1 MTR_8g469310 36.268 568 339 5 30 583 13 571 1.10e-122 374
MS.gene08380.t1 MTR_3g100980 35.223 582 329 6 37 583 10 578 3.18e-122 373
MS.gene08380.t1 MTR_8g103233 38.504 548 322 8 40 580 14 553 4.96e-122 372
MS.gene08380.t1 MTR_7g088820 38.938 452 269 6 129 575 1 450 4.05e-121 367
MS.gene08380.t1 MTR_7g065080 39.673 489 276 7 101 586 2 474 7.38e-121 366
MS.gene08380.t1 MTR_4g033325 41.794 457 236 8 128 580 18 448 3.04e-120 363
MS.gene08380.t1 MTR_5g038190 35.938 576 340 9 20 583 10 568 3.97e-120 367
MS.gene08380.t1 MTR_8g087810 39.199 574 325 10 29 583 7 575 3.06e-119 365
MS.gene08380.t1 MTR_4g033325 41.995 431 229 6 154 580 9 422 1.21e-116 353
MS.gene08380.t1 MTR_4g033385 40.909 462 236 10 128 580 16 449 2.63e-116 353
MS.gene08380.t1 MTR_7g111260 34.432 546 339 7 41 583 17 546 2.59e-114 352
MS.gene08380.t1 MTR_1g085090 34.046 561 349 9 28 583 2 546 4.50e-114 353
MS.gene08380.t1 MTR_2g101650 35.883 549 336 7 41 580 22 563 7.37e-114 352
MS.gene08380.t1 MTR_4g024930 36.602 571 325 10 19 581 12 553 3.39e-113 349
MS.gene08380.t1 MTR_1g009200 36.881 545 326 7 45 580 29 564 8.78e-113 349
MS.gene08380.t1 MTR_1g026750 35.155 549 339 5 40 580 15 554 1.40e-111 345
MS.gene08380.t1 MTR_1g026740 35.556 540 339 4 45 580 19 553 3.21e-111 344
MS.gene08380.t1 MTR_4g123537 36.151 556 336 7 33 584 31 571 6.32e-111 345
MS.gene08380.t1 MTR_2g101590 36.000 550 334 9 41 580 24 565 3.98e-109 341
MS.gene08380.t1 MTR_2g101610 36.182 550 333 9 41 580 25 566 2.33e-108 339
MS.gene08380.t1 MTR_2g101640 34.974 569 354 9 20 580 2 562 4.19e-107 335
MS.gene08380.t1 MTR_4g107610 35.283 547 339 8 42 580 30 569 1.27e-105 331
MS.gene08380.t1 MTR_4g011280 35.624 553 328 14 42 580 31 569 2.62e-105 330
MS.gene08380.t1 MTR_7g064780 31.874 571 377 7 18 580 1 567 5.20e-103 323
MS.gene08380.t1 MTR_1g026770 34.120 551 341 8 45 585 17 555 6.44e-102 320
MS.gene08380.t1 MTR_1g057460 34.875 562 332 15 26 580 30 564 1.02e-101 320
MS.gene08380.t1 MTR_7g098210 35.755 523 244 9 62 578 1 437 1.12e-100 313
MS.gene08380.t1 MTR_2g101560 34.358 553 339 10 41 580 25 566 1.43e-100 318
MS.gene08380.t1 MTR_6g008690 32.857 560 323 10 48 586 12 539 9.36e-96 303
MS.gene08380.t1 MTR_1g057460 35.433 508 299 12 78 580 10 493 3.50e-95 300
MS.gene08380.t1 MTR_7g064800 33.029 548 353 8 41 578 24 567 1.06e-92 296
MS.gene08380.t1 MTR_0236s0050 35.433 508 299 12 78 580 10 493 7.41e-89 284
MS.gene08380.t1 MTR_2g093640 30.545 550 342 9 45 581 23 545 6.62e-81 265
MS.gene08380.t1 MTR_2g093160 32.110 545 340 9 45 581 23 545 2.58e-78 258
MS.gene08380.t1 MTR_2g093180 31.927 545 342 9 45 581 23 546 1.02e-77 256
MS.gene08380.t1 MTR_7g051880 31.047 554 341 8 29 580 11 525 5.85e-77 253
MS.gene08380.t1 MTR_4g033310 40.690 290 163 3 293 580 202 484 1.26e-75 249
MS.gene08380.t1 MTR_4g033310 47.619 189 90 2 22 210 10 189 1.17e-45 168
MS.gene08380.t1 MTR_7g051830 30.144 554 346 7 29 580 11 525 4.06e-74 246
MS.gene08380.t1 MTR_7g052600 30.018 563 353 8 20 580 2 525 5.00e-74 246
MS.gene08380.t1 MTR_1g009170 33.002 403 208 11 168 562 9 357 4.51e-59 202
MS.gene08380.t1 MTR_3g065350 37.423 163 96 2 352 514 1 157 1.81e-30 117
MS.gene08380.t1 MTR_4g033390 42.169 83 48 0 498 580 30 112 1.91e-19 85.1
MS.gene08380.t1 MTR_8g091265 37.069 116 69 4 313 424 3 118 1.77e-12 65.5
MS.gene08380.t1 MTR_4g124330 33.058 121 58 2 145 265 8 105 5.84e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08380.t1 AT2G02040 76.962 586 133 1 1 586 1 584 0.0 962
MS.gene08380.t1 AT1G62200 64.094 596 195 4 1 585 2 589 0.0 806
MS.gene08380.t1 AT1G62200 61.280 625 194 5 1 585 16 632 0.0 791
MS.gene08380.t1 AT1G62200 61.280 625 194 5 1 585 2 618 0.0 791
MS.gene08380.t1 AT3G54140 61.837 566 213 3 21 585 2 565 0.0 746
MS.gene08380.t1 AT3G54140 61.837 566 213 3 21 585 2 565 0.0 746
MS.gene08380.t1 AT2G02020 61.670 587 181 7 1 585 1 545 0.0 736
MS.gene08380.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene08380.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene08380.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene08380.t1 AT2G02020 58.262 587 180 8 1 585 1 524 0.0 675
MS.gene08380.t1 AT5G46050 45.355 549 287 5 20 563 4 544 1.85e-168 491
MS.gene08380.t1 AT1G32450 42.857 574 315 8 18 581 12 582 3.54e-168 492
MS.gene08380.t1 AT1G68570 45.167 569 305 6 20 583 2 568 4.10e-165 483
MS.gene08380.t1 AT2G40460 42.301 565 313 4 21 583 2 555 2.17e-162 476
MS.gene08380.t1 AT4G21680 43.234 569 308 7 27 585 12 575 2.37e-161 474
MS.gene08380.t1 AT1G68570 46.255 534 282 5 55 583 5 538 3.11e-160 470
MS.gene08380.t1 AT5G46040 42.531 569 314 5 20 583 4 564 3.79e-159 468
MS.gene08380.t1 AT5G19640 42.123 584 313 8 5 581 17 582 5.20e-158 466
MS.gene08380.t1 AT2G26690 43.234 569 307 7 21 584 2 559 2.11e-154 455
MS.gene08380.t1 AT3G53960 41.446 567 321 6 20 583 15 573 5.36e-148 440
MS.gene08380.t1 AT1G12110 42.115 558 313 4 33 584 17 570 3.38e-147 437
MS.gene08380.t1 AT2G37900 39.062 576 335 5 15 586 8 571 1.25e-145 433
MS.gene08380.t1 AT2G26690 43.364 535 287 7 55 584 3 526 1.15e-144 429
MS.gene08380.t1 AT1G22540 41.250 560 299 7 31 584 18 553 1.37e-143 427
MS.gene08380.t1 AT3G54450 38.406 552 314 8 41 584 10 543 1.78e-142 424
MS.gene08380.t1 AT2G26690 43.321 524 281 7 66 584 2 514 5.01e-141 419
MS.gene08380.t1 AT1G72140 39.792 578 301 8 13 580 9 549 6.58e-139 415
MS.gene08380.t1 AT5G13400 39.616 573 325 7 26 583 45 611 2.02e-136 411
MS.gene08380.t1 AT1G22570 40.575 557 299 9 13 561 6 538 6.87e-133 400
MS.gene08380.t1 AT1G69870 38.225 552 328 7 40 583 48 594 5.73e-132 399
MS.gene08380.t1 AT1G59740 37.931 580 340 9 1 573 1 567 2.10e-131 397
MS.gene08380.t1 AT1G22550 38.038 581 325 7 13 584 6 560 4.17e-130 392
MS.gene08380.t1 AT1G69850 37.564 583 341 6 18 583 3 579 1.26e-129 392
MS.gene08380.t1 AT3G16180 38.919 555 323 8 37 580 16 565 7.29e-129 390
MS.gene08380.t1 AT1G27040 37.770 556 334 3 29 581 9 555 9.96e-128 386
MS.gene08380.t1 AT1G27040 37.770 556 334 3 29 581 13 559 1.28e-127 386
MS.gene08380.t1 AT5G46050 44.773 440 230 5 129 563 1 432 6.68e-127 381
MS.gene08380.t1 AT3G21670 39.046 566 315 7 29 583 12 558 3.52e-126 383
MS.gene08380.t1 AT1G72125 40.214 562 307 11 31 584 17 557 4.89e-126 382
MS.gene08380.t1 AT1G72130 38.779 557 290 10 40 586 21 536 6.06e-126 381
MS.gene08380.t1 AT2G37900 38.569 503 295 4 86 586 2 492 1.79e-125 378
MS.gene08380.t1 AT1G22570 40.891 516 279 7 54 561 4 501 2.89e-124 376
MS.gene08380.t1 AT1G52190 36.347 553 334 7 41 580 19 566 1.27e-123 377
MS.gene08380.t1 AT1G27040 38.447 528 313 3 57 581 9 527 6.92e-123 373
MS.gene08380.t1 AT1G33440 37.435 577 332 9 6 573 4 560 1.32e-121 372
MS.gene08380.t1 AT1G72120 38.721 563 310 10 31 584 17 553 3.08e-120 367
MS.gene08380.t1 AT1G18880 35.385 585 338 12 14 583 7 566 1.18e-119 367
MS.gene08380.t1 AT1G27080 35.702 563 335 10 35 586 5 551 4.45e-111 344
MS.gene08380.t1 AT5G62730 33.625 571 348 7 20 580 33 582 7.28e-109 338
MS.gene08380.t1 AT5G62680 33.893 596 371 11 6 583 2 592 1.20e-108 339
MS.gene08380.t1 AT5G14940 33.868 561 329 10 41 583 5 541 1.60e-104 326
MS.gene08380.t1 AT5G28470 31.760 551 361 7 37 580 11 553 1.26e-103 324
MS.gene08380.t1 AT3G47960 34.672 548 343 9 47 583 65 608 1.52e-103 326
MS.gene08380.t1 AT5G62730 33.579 542 329 7 49 580 3 523 6.40e-102 319
MS.gene08380.t1 AT5G28470 31.579 551 360 8 37 580 11 551 1.19e-100 316
MS.gene08380.t1 AT1G27080 35.564 523 311 9 74 586 3 509 7.16e-100 313
MS.gene08380.t1 AT1G69860 34.159 565 348 8 28 586 6 552 5.90e-99 312
MS.gene08380.t1 AT1G72130 38.584 438 227 8 158 586 14 418 4.09e-98 305
MS.gene08380.t1 AT1G72130 38.584 438 227 8 158 586 14 418 4.09e-98 305
MS.gene08380.t1 AT3G01350 31.095 566 347 10 40 581 3 549 1.04e-90 291
MS.gene08380.t1 AT3G25260 31.818 550 328 12 33 580 11 515 3.21e-88 283
MS.gene08380.t1 AT3G45650 29.893 562 367 8 27 584 6 544 1.46e-86 280
MS.gene08380.t1 AT3G45680 30.298 571 360 12 23 584 2 543 8.33e-86 278
MS.gene08380.t1 AT3G45660 30.783 549 349 10 42 584 20 543 4.00e-83 270
MS.gene08380.t1 AT3G45660 30.783 549 349 10 42 584 20 543 4.00e-83 270
MS.gene08380.t1 AT3G45660 30.783 549 349 10 42 584 41 564 9.32e-83 270
MS.gene08380.t1 AT3G45650 28.741 588 366 9 27 584 6 570 1.28e-81 267
MS.gene08380.t1 AT3G25280 30.741 553 336 10 33 580 11 521 7.77e-81 263
MS.gene08380.t1 AT3G45720 29.390 541 349 11 51 584 27 541 7.08e-77 254
MS.gene08380.t1 AT3G45710 28.261 552 361 11 42 584 20 545 7.65e-77 254
MS.gene08380.t1 AT3G45700 27.717 552 351 11 45 584 18 533 4.88e-72 241
MS.gene08380.t1 AT3G45690 27.022 544 328 12 45 582 20 500 5.33e-63 216
MS.gene08380.t1 AT2G38100 28.407 521 324 13 71 580 2 484 5.88e-48 175
MS.gene08380.t1 AT2G38100 28.407 521 324 13 71 580 18 500 1.94e-47 174
MS.gene08380.t1 AT2G38100 28.407 521 324 13 71 580 24 506 2.61e-47 174
MS.gene08380.t1 AT5G11570 38.462 260 148 5 325 582 229 478 1.43e-43 162
MS.gene08380.t1 AT5G11570 30.547 311 196 9 29 331 2 300 1.65e-34 137

Find 145 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCATTCCTGCTTTATTTA+TGG 0.152422 4.1:-17378353 MS.gene08380:CDS
AAACCATGTGTGTCCTCTTT+TGG 0.164173 4.1:-17378526 MS.gene08380:CDS
GATGGCTCGGTTGACTTTAA+AGG 0.177826 4.1:-17379540 MS.gene08380:CDS
AATCCCTCAGTATTTCTTAT+TGG 0.209801 4.1:-17376192 MS.gene08380:CDS
GGAAGAAGCTCTTGTTGTTC+AGG 0.262904 4.1:-17380683 MS.gene08380:intron
GAAGTAAATCATGGAGAAAA+TGG 0.277360 4.1:+17379190 None:intergenic
ATCCCTCAGTATTTCTTATT+GGG 0.278225 4.1:-17376191 MS.gene08380:CDS
CAGTTCTAGCAGATTCTTAC+TGG 0.283591 4.1:-17379232 MS.gene08380:CDS
CCAATTGCAAGGAAATTTAC+TGG 0.288958 4.1:-17376380 MS.gene08380:CDS
GGCATTCCTGCTTTATTTAT+GGG 0.289873 4.1:-17378352 MS.gene08380:CDS
TGCACAAGATAGAAATAAAA+AGG 0.309689 4.1:+17376315 None:intergenic
AAAGGCTTACCTAGGATAAA+TGG 0.313106 4.1:+17379474 None:intergenic
CCAGTAAATTTCCTTGCAAT+TGG 0.315468 4.1:+17376380 None:intergenic
TGACCTCCATTCAAATTATC+TGG 0.318762 4.1:+17375984 None:intergenic
GATCCGCATGTTTCCAGTTT+GGG 0.318958 4.1:-17376576 MS.gene08380:CDS
CATGTCAGCAGCTGCTGTTT+TGG 0.319086 4.1:-17376294 MS.gene08380:CDS
ATTGAAGCCTGCTGAGTGTT+TGG 0.320390 4.1:-17378635 MS.gene08380:CDS
ATCCCTTCTTAACCCTTTCC+CGG 0.335365 4.1:+17378476 None:intergenic
GAAAATGCAGGCTGGGGTCT+TGG 0.340594 4.1:-17378379 MS.gene08380:CDS
ATGTTTCCAGTTTGGGCTAC+TGG 0.352423 4.1:-17376569 MS.gene08380:CDS
CATAAACTTCGCATGGCATC+TGG 0.353544 4.1:+17376113 None:intergenic
TGATCCGCATGTTTCCAGTT+TGG 0.354435 4.1:-17376577 MS.gene08380:CDS
CTGCAGATTGCGAACGAGCT+TGG 0.360051 4.1:-17376260 MS.gene08380:CDS
TGCAGATTGCGAACGAGCTT+GGG 0.368793 4.1:-17376259 MS.gene08380:CDS
GTCTCTACCTGATTGCGCTT+GGG 0.374585 4.1:-17378561 MS.gene08380:CDS
GTGGTGACTATTCTAACCTT+TGG 0.376077 4.1:-17376640 MS.gene08380:CDS
ATTCTTACTGGGGACGATAC+TGG 0.377598 4.1:-17379220 MS.gene08380:CDS
GTCACTTCTGACTACTTCAC+TGG 0.378429 4.1:-17376081 MS.gene08380:CDS
TTGAAGCCTGCTGAGTGTTT+GGG 0.391323 4.1:-17378634 MS.gene08380:CDS
TGTTACCTTGCACCTCTCAT+TGG 0.393805 4.1:-17379257 MS.gene08380:CDS
CCACAAACAATGTTGACATC+TGG 0.401887 4.1:+17376522 None:intergenic
ACCTGGCACATTCTTGTAAG+AGG 0.405587 4.1:+17378265 None:intergenic
CTGTACCCCTTACTATACTA+TGG 0.407601 4.1:-17376217 MS.gene08380:CDS
TACCTGATTGCGCTTGGGAC+TGG 0.412113 4.1:-17378556 MS.gene08380:CDS
ATGGCTCGGTTGACTTTAAA+GGG 0.412816 4.1:-17379539 MS.gene08380:CDS
ATGTAGCTTGCGAGTAAGAT+AGG 0.425650 4.1:+17379328 None:intergenic
GCAGGCTGGGGTCTTGGATT+CGG 0.425778 4.1:-17378373 MS.gene08380:CDS
CACTCAGCAGGCTTCAATGC+TGG 0.427383 4.1:+17378640 None:intergenic
GGTCTCTACCTGATTGCGCT+TGG 0.427510 4.1:-17378562 MS.gene08380:CDS
GGAAGATTCATCGCGTACTT+TGG 0.427942 4.1:-17380704 MS.gene08380:CDS
CAATAAAACTGCTTGATACA+AGG 0.433027 4.1:+17378413 None:intergenic
TACAAGAATGTGCCAGGTTG+TGG 0.435062 4.1:-17378260 MS.gene08380:CDS
GCATATTGTGCAGGAGTAGC+TGG 0.436853 4.1:+17378598 None:intergenic
CATAGTATAGTAAGGGGTAC+AGG 0.441635 4.1:+17376218 None:intergenic
CGGCAAGACACGTCACTACT+TGG 0.445268 4.1:-17379289 MS.gene08380:CDS
GAAATTTACTGGCAAAGAAA+GGG 0.445439 4.1:-17376369 MS.gene08380:CDS
GGAAATTTACTGGCAAAGAA+AGG 0.446969 4.1:-17376370 MS.gene08380:CDS
TGTTGTCTCGTGCAGGGAAT+GGG 0.447601 4.1:-17378688 MS.gene08380:intron
CACCAGTCCCAAGCGCAATC+AGG 0.449732 4.1:+17378554 None:intergenic
CCCGTGCTTAAGCAGAATAC+TGG 0.455033 4.1:-17379513 MS.gene08380:CDS
TGGATTCCAGATAATTTGAA+TGG 0.455088 4.1:-17375990 MS.gene08380:CDS
ATAATGCCAGTAGCCCAAAC+TGG 0.457072 4.1:+17376563 None:intergenic
TCTGGGTCCCTGTCTATGAC+AGG 0.460821 4.1:-17376412 MS.gene08380:CDS
GGATTTGCCATAGTATAGTA+AGG 0.466110 4.1:+17376210 None:intergenic
CCAGATGTCAACATTGTTTG+TGG 0.471109 4.1:-17376522 MS.gene08380:CDS
GACAAGAGCTCTGCAATTGA+AGG 0.471271 4.1:-17378172 MS.gene08380:CDS
TTCGCATGGCATCTGGAGAT+TGG 0.473235 4.1:+17376120 None:intergenic
ACTATAAACCTGTCATAGAC+AGG 0.482414 4.1:+17376404 None:intergenic
CCCTCTTACAAGAATGTGCC+AGG 0.485020 4.1:-17378266 MS.gene08380:CDS
AAATGAGTGCTGTGAACGTT+TGG 0.486042 4.1:-17379381 MS.gene08380:CDS
GAGTTGCAAAGAATGGGAAT+TGG 0.489618 4.1:-17376338 MS.gene08380:CDS
TTAAGCAGAATACTGGCAAC+TGG 0.494822 4.1:-17379506 MS.gene08380:CDS
TCAAAAGTTGAGAGGGAAGC+TGG 0.497139 4.1:+17376452 None:intergenic
GCAGAAGTATTCACATTCGT+GGG 0.498185 4.1:-17376164 MS.gene08380:CDS
CACAAACAATGTTGACATCT+GGG 0.498393 4.1:+17376523 None:intergenic
TACAAGAGACTACTATCCTC+AGG 0.499157 4.1:+17378205 None:intergenic
AAAGCTTGTCCATTTATCCT+AGG 0.499238 4.1:-17379483 MS.gene08380:intron
TGCGAACGAGCTTGGGCTTG+TGG 0.501123 4.1:-17376252 MS.gene08380:CDS
ATAGTAAGGGGTACAGGGAC+AGG 0.501849 4.1:+17376224 None:intergenic
AATTACAATGAAGTAAATCA+TGG 0.505743 4.1:+17379181 None:intergenic
GATTCAAGAAAATGCAGGCT+GGG 0.507809 4.1:-17378386 MS.gene08380:CDS
TCCCCGGGAAAGGGTTAAGA+AGG 0.509878 4.1:-17378479 MS.gene08380:CDS
TGATACTGATCCCCGGGAAA+GGG 0.512180 4.1:-17378488 MS.gene08380:CDS
AAATTATCTGGAATCCATCC+AGG 0.515027 4.1:+17375996 None:intergenic
AAACTGATCTGCCCCAAAAG+AGG 0.516439 4.1:+17378513 None:intergenic
AGCAGAAGTATTCACATTCG+TGG 0.516878 4.1:-17376165 MS.gene08380:CDS
TCCCTTCTTAACCCTTTCCC+GGG 0.517322 4.1:+17378477 None:intergenic
ATGATACTGATCCCCGGGAA+AGG 0.520176 4.1:-17378489 MS.gene08380:CDS
GCCAGTATTCTGCTTAAGCA+CGG 0.524420 4.1:+17379512 None:intergenic
CCAGTATTCTGCTTAAGCAC+GGG 0.535944 4.1:+17379513 None:intergenic
TCAACATTGTTTGTGGAACA+AGG 0.537468 4.1:-17376515 MS.gene08380:CDS
GAGACTTTGCACTGTGACAC+AGG 0.538657 4.1:-17376618 MS.gene08380:CDS
GGATTCAAGAAAATGCAGGC+TGG 0.539579 4.1:-17378387 MS.gene08380:CDS
GCTAATCCCATAAATAAAGC+AGG 0.540709 4.1:+17378346 None:intergenic
GGTTTATAGTTCCAATTGCA+AGG 0.543519 4.1:-17376391 MS.gene08380:CDS
TAGTAGTCTCTTGTACGAAA+CGG 0.552468 4.1:-17378197 MS.gene08380:CDS
AGTTCTAGCAGATTCTTACT+GGG 0.559492 4.1:-17379231 MS.gene08380:CDS
GCAGCACCCAAACACTCAGC+AGG 0.559886 4.1:+17378628 None:intergenic
AATAAAACTGCTTGATACAA+GGG 0.562387 4.1:+17378414 None:intergenic
TTGCACTGTGACACAGGTGG+AGG 0.563549 4.1:-17376612 MS.gene08380:CDS
AGTAAGCTTTACACAGGAGA+TGG 0.565342 4.1:-17379558 MS.gene08380:CDS
CTGATTGCGCTTGGGACTGG+TGG 0.569652 4.1:-17378553 MS.gene08380:CDS
GAAAAGATGCTGCCACAACC+TGG 0.573806 4.1:+17378248 None:intergenic
GTTTGATGATACTGATCCCC+GGG 0.576524 4.1:-17378494 MS.gene08380:CDS
CTTACTCGCAAGCTACATGA+AGG 0.577120 4.1:-17379323 MS.gene08380:CDS
TCACTTCTGACTACTTCACT+GGG 0.577467 4.1:-17376080 MS.gene08380:CDS
CCTGGCACATTCTTGTAAGA+GGG 0.578165 4.1:+17378266 None:intergenic
TTATTTATGGGATTAGCCAT+CGG 0.583415 4.1:-17378340 MS.gene08380:CDS
AAATTTACTGGCAAAGAAAG+GGG 0.587108 4.1:-17376368 MS.gene08380:CDS
GCTTTACACAGGAGATGGCT+CGG 0.589644 4.1:-17379553 MS.gene08380:CDS
AGTTTGATGATACTGATCCC+CGG 0.590421 4.1:-17378495 MS.gene08380:CDS
TCTGATGCTGAGAGGAAAAG+TGG 0.591094 4.1:-17376659 MS.gene08380:CDS
ACGCGATGAATCTTCCTCTA+CGG 0.600209 4.1:+17380711 None:intergenic
TGTGAACGTTTGGCATACTA+CGG 0.601727 4.1:-17379371 MS.gene08380:CDS
GAAGAGAGTAAGCTTTACAC+AGG 0.604640 4.1:-17379564 MS.gene08380:CDS
GCTCTGCAATTGAAGGAAGT+CGG 0.605687 4.1:-17378165 MS.gene08380:CDS
AATTACATCAAAAGTTGAGA+GGG 0.606804 4.1:+17376445 None:intergenic
ATTCCAGATAATTTGAATGG+AGG 0.607985 4.1:-17375987 MS.gene08380:CDS
ATAGTATAGTAAGGGGTACA+GGG 0.610486 4.1:+17376219 None:intergenic
GATTTGCCATAGTATAGTAA+GGG 0.612787 4.1:+17376211 None:intergenic
ACTATGATGAACACTAGTAT+CGG 0.613753 4.1:-17376491 MS.gene08380:CDS
AGCACTGCATAAACTTCGCA+TGG 0.615419 4.1:+17376106 None:intergenic
GTGTGGATTCAAGAAAATGC+AGG 0.620641 4.1:-17378391 MS.gene08380:CDS
CCCTTCTTAACCCTTTCCCG+GGG 0.625514 4.1:+17378478 None:intergenic
AGACACGTCACTACTTGGCA+AGG 0.625847 4.1:-17379284 MS.gene08380:CDS
TAATTACATCAAAAGTTGAG+AGG 0.625894 4.1:+17376444 None:intergenic
ATTCAAGAAAATGCAGGCTG+GGG 0.627196 4.1:-17378385 MS.gene08380:CDS
GCTAGAACTGCTCCAATGAG+AGG 0.630490 4.1:+17379245 None:intergenic
AAAGTTGAGAGGGAAGCTGG+TGG 0.638855 4.1:+17376455 None:intergenic
GGAGAAAATGGGTTCCGTAG+AGG 0.645377 4.1:-17380725 None:intergenic
ACAAGAGACTACTATCCTCA+GGG 0.646212 4.1:+17378206 None:intergenic
AACTTACTTCTCTACACGAG+GGG 0.646338 4.1:-17376024 MS.gene08380:CDS
GTAACTTACTTCTCTACACG+AGG 0.646598 4.1:-17376026 MS.gene08380:CDS
CTATAAACCTGTCATAGACA+GGG 0.648079 4.1:+17376405 None:intergenic
TCACAGTGCAAAGTCTCCAA+AGG 0.648321 4.1:+17376624 None:intergenic
AAGTTGAGAGGGAAGCTGGT+GGG 0.649456 4.1:+17376456 None:intergenic
CTGTAGTCTCTGATGCTGAG+AGG 0.653969 4.1:-17376667 MS.gene08380:CDS
CTGCTCCAATGAGAGGTGCA+AGG 0.655982 4.1:+17379252 None:intergenic
CTCCCAATAAGAAATACTGA+GGG 0.657516 4.1:+17376189 None:intergenic
ATTTGCCATAGTATAGTAAG+GGG 0.658896 4.1:+17376212 None:intergenic
CCCCGGGAAAGGGTTAAGAA+GGG 0.661735 4.1:-17378478 MS.gene08380:CDS
TATTGTGCAGGAGTAGCTGG+AGG 0.663423 4.1:+17378601 None:intergenic
GTTCTAGCAGATTCTTACTG+GGG 0.673438 4.1:-17379230 MS.gene08380:CDS
ACTTTGCACTGTGACACAGG+TGG 0.676355 4.1:-17376615 MS.gene08380:CDS
GAGTTCTTTCATTCTCACTG+TGG 0.679581 4.1:-17376048 MS.gene08380:CDS
GCTCCCAATAAGAAATACTG+AGG 0.683176 4.1:+17376188 None:intergenic
ATTGTGCAGGAGTAGCTGGA+GGG 0.683715 4.1:+17378602 None:intergenic
GCCCCAAAAGAGGACACACA+TGG 0.688333 4.1:+17378523 None:intergenic
CAGAAGTATTCACATTCGTG+GGG 0.688336 4.1:-17376163 MS.gene08380:CDS
TAGCCCAAACTGGAAACATG+CGG 0.695289 4.1:+17376573 None:intergenic
TAACTTACTTCTCTACACGA+GGG 0.696917 4.1:-17376025 MS.gene08380:CDS
GCGGAATCTGGATGTCCCTG+AGG 0.708173 4.1:-17378221 MS.gene08380:CDS
TAGAGCATAGTGATGAACTG+AGG 0.711499 4.1:-17378138 MS.gene08380:intron
ACTTACTTCTCTACACGAGG+GGG 0.713796 4.1:-17376023 MS.gene08380:CDS
ACATGAAGGAAATGTCTCTG+CGG 0.738709 4.1:-17379309 MS.gene08380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATTAACTTATATAAC+TGG - chr4.1:17376120-17376139 MS.gene08380:CDS 10.0%
!! ATAATAATAAGTATAGTAAT+TGG + chr4.1:17376061-17376080 None:intergenic 10.0%
!! TTACTATACTTATTATTATT+AGG - chr4.1:17376062-17376081 MS.gene08380:CDS 10.0%
!!! TAATTTTATTAATTGAAGAA+TGG + chr4.1:17376109-17376128 None:intergenic 10.0%
!! AAAGAAAAGAAAAAAATAGA+GGG + chr4.1:17375989-17376008 None:intergenic 15.0%
!! ATAACCTAATAATAATTGTA+TGG + chr4.1:17376603-17376622 None:intergenic 15.0%
!! ATATAAAGAAGATTTAGAAA+TGG + chr4.1:17377579-17377598 None:intergenic 15.0%
!! ATTTCCATACAATTATTATT+AGG - chr4.1:17376596-17376615 MS.gene08380:CDS 15.0%
!! ATTTCTAAATCTTCTTTATA+TGG - chr4.1:17377578-17377597 MS.gene08380:intron 15.0%
!! GTTATAAGAAACAAATATTA+TGG - chr4.1:17377630-17377649 MS.gene08380:intron 15.0%
!! TACTTATTATTATTAGGATT+AGG - chr4.1:17376068-17376087 MS.gene08380:CDS 15.0%
!! TATCAACACAAATTATTATT+AGG + chr4.1:17379812-17379831 None:intergenic 15.0%
!! TTTCATATAAAATGCAAATA+CGG + chr4.1:17379342-17379361 None:intergenic 15.0%
!! TTTCTAAATCTTCTTTATAT+GGG - chr4.1:17377579-17377598 MS.gene08380:intron 15.0%
!!! AAAAAAAGCTTTATTTACTT+CGG - chr4.1:17379567-17379586 MS.gene08380:CDS 15.0%
!!! AATGTTTTTATTACTATTTG+GGG - chr4.1:17376732-17376751 MS.gene08380:intron 15.0%
!!! ACAACATTAAATTTAAAGTA+AGG + chr4.1:17378499-17378518 None:intergenic 15.0%
!!! ATTTTTTTAACATTAGAGTA+GGG + chr4.1:17378672-17378691 None:intergenic 15.0%
!!! CAACATTAAATTTAAAGTAA+GGG + chr4.1:17378498-17378517 None:intergenic 15.0%
!!! CAATGTTTTTATTACTATTT+GGG - chr4.1:17376731-17376750 MS.gene08380:intron 15.0%
!!! TCAATGTTTTTATTACTATT+TGG - chr4.1:17376730-17376749 MS.gene08380:intron 15.0%
!! AAAGTTATAGGGTTAATATT+AGG - chr4.1:17377768-17377787 MS.gene08380:intron 20.0%
!! AAATCAATAAACTACGAATT+TGG + chr4.1:17378624-17378643 None:intergenic 20.0%
!! AATTACAATGAAGTAAATCA+TGG + chr4.1:17377424-17377443 None:intergenic 20.0%
!! ATAGGAGAATAAAAATATCT+TGG + chr4.1:17377452-17377471 None:intergenic 20.0%
!! ATGAATTTGAGTATTATAGT+CGG + chr4.1:17377736-17377755 None:intergenic 20.0%
!! ATTTGACATTTAACTATCAA+GGG + chr4.1:17376903-17376922 None:intergenic 20.0%
!! CTACTCTAATGTTAAAAAAA+TGG - chr4.1:17378671-17378690 MS.gene08380:CDS 20.0%
!! GAAAGAAAAGAAAAAAATAG+AGG + chr4.1:17375990-17376009 None:intergenic 20.0%
!! TAAATAATCAAAGACACAAA+TGG - chr4.1:17376209-17376228 MS.gene08380:CDS 20.0%
!! TAGCCAAAAAAAATCAAAAA+TGG + chr4.1:17379127-17379146 None:intergenic 20.0%
!! TATTTGACATTTAACTATCA+AGG + chr4.1:17376904-17376923 None:intergenic 20.0%
!! TTATTATTAGGATTAGGATT+AGG - chr4.1:17376074-17376093 MS.gene08380:CDS 20.0%
!! TTCTAAATCTTCTTTATATG+GGG - chr4.1:17377580-17377599 MS.gene08380:intron 20.0%
!!! AAAAGTAGAAAGTATAGTAT+TGG + chr4.1:17376562-17376581 None:intergenic 20.0%
!!! ATTTGTGTTGATATCAATAA+AGG - chr4.1:17379819-17379838 MS.gene08380:intron 20.0%
!!! CATTTTTTTAACATTAGAGT+AGG + chr4.1:17378673-17378692 None:intergenic 20.0%
!!! GTGTAGAGAATTTTATAAAT+AGG + chr4.1:17377470-17377489 None:intergenic 20.0%
!!! TATTAGAAATTTTTTACCAG+AGG + chr4.1:17379777-17379796 None:intergenic 20.0%
!!! TCACCATTTTTGATTTTTTT+TGG - chr4.1:17379121-17379140 MS.gene08380:intron 20.0%
!!! TTTTACTTTTCTATCAACAT+AGG - chr4.1:17378163-17378182 MS.gene08380:CDS 20.0%
!!! TTTTGAGATCTATGATTTAT+TGG - chr4.1:17379275-17379294 MS.gene08380:CDS 20.0%
! AAATGGAAGTTGTATATGTA+AGG - chr4.1:17378688-17378707 MS.gene08380:intron 25.0%
! AACACTTAAACAGGAATATT+GGG + chr4.1:17378588-17378607 None:intergenic 25.0%
! AATAAAACTGCTTGATACAA+GGG + chr4.1:17378191-17378210 None:intergenic 25.0%
! AATAACCAATAGTTCATCAT+AGG + chr4.1:17377003-17377022 None:intergenic 25.0%
! AATGGAAGTTGTATATGTAA+GGG - chr4.1:17378689-17378708 MS.gene08380:intron 25.0%
! AATTACATCAAAAGTTGAGA+GGG + chr4.1:17380160-17380179 None:intergenic 25.0%
! ACAATAACATTCCTTGAAAA+CGG + chr4.1:17379682-17379701 None:intergenic 25.0%
! AGAGTAAGTTAGATGATATT+AGG + chr4.1:17378776-17378795 None:intergenic 25.0%
! ATAACCAATAGTTCATCATA+GGG + chr4.1:17377002-17377021 None:intergenic 25.0%
! ATCTTTAGCCAAAATTTCAA+TGG - chr4.1:17379048-17379067 MS.gene08380:intron 25.0%
! CAAAAGATACAAGAAAAAGA+AGG - chr4.1:17380710-17380729 MS.gene08380:CDS 25.0%
! CATCACAAATTACATTATGT+AGG + chr4.1:17377537-17377556 None:intergenic 25.0%
! GTTACATAAGTGAAATGAAA+AGG + chr4.1:17377149-17377168 None:intergenic 25.0%
! TAATTACATCAAAAGTTGAG+AGG + chr4.1:17380161-17380180 None:intergenic 25.0%
! TGCACAAGATAGAAATAAAA+AGG + chr4.1:17380290-17380309 None:intergenic 25.0%
! TTATGATCAAGAGTTGAATA+AGG + chr4.1:17376177-17376196 None:intergenic 25.0%
!! ATGTAATTTGTGATGGTAAT+AGG - chr4.1:17377542-17377561 MS.gene08380:intron 25.0%
!! CATGTAAACAATTTTCTCTT+TGG - chr4.1:17379728-17379747 MS.gene08380:intron 25.0%
!! CTACATAATGTAATTTGTGA+TGG - chr4.1:17377535-17377554 MS.gene08380:intron 25.0%
!! CTTCTTTTTCTTGTATCTTT+TGG + chr4.1:17380712-17380731 None:intergenic 25.0%
!!! ACTTTCCTTTGTTTTAATGA+AGG - chr4.1:17379896-17379915 MS.gene08380:intron 25.0%
!!! ATGTAATTAGCGTTATTTTC+TGG - chr4.1:17380172-17380191 MS.gene08380:intron 25.0%
!!! ATTGGTTATTTTTCATCTGA+AGG - chr4.1:17377013-17377032 MS.gene08380:intron 25.0%
!!! GTGTTTTAATGTAACAGATA+GGG - chr4.1:17376231-17376250 MS.gene08380:CDS 25.0%
!!! TGTAATTAGCGTTATTTTCT+GGG - chr4.1:17380173-17380192 MS.gene08380:intron 25.0%
AAACCTTGTGTCAAAAAACT+AGG + chr4.1:17379086-17379105 None:intergenic 30.0%
AAATTTACTGGCAAAGAAAG+GGG - chr4.1:17380234-17380253 MS.gene08380:intron 30.0%
AACCTTGTGTCAAAAAACTA+GGG + chr4.1:17379085-17379104 None:intergenic 30.0%
AATCCCTCAGTATTTCTTAT+TGG - chr4.1:17380410-17380429 MS.gene08380:intron 30.0%
ACTATGATGAACACTAGTAT+CGG - chr4.1:17380111-17380130 MS.gene08380:intron 30.0%
ACTTGAGTAATTTCCATATC+TGG + chr4.1:17376802-17376821 None:intergenic 30.0%
AGACACCTTCATTAAAACAA+AGG + chr4.1:17379904-17379923 None:intergenic 30.0%
ATATAGTGTGGACAATGAAT+AGG - chr4.1:17376276-17376295 MS.gene08380:CDS 30.0%
ATCAGATAGTGACTATGATT+AGG + chr4.1:17376642-17376661 None:intergenic 30.0%
ATCCCTCAGTATTTCTTATT+GGG - chr4.1:17380411-17380430 MS.gene08380:intron 30.0%
ATCGTTTAGGCAAGAAAATT+AGG + chr4.1:17379424-17379443 None:intergenic 30.0%
ATGTCTAATTGTGATCGTTT+AGG + chr4.1:17379437-17379456 None:intergenic 30.0%
ATTCCAGATAATTTGAATGG+AGG - chr4.1:17380615-17380634 MS.gene08380:intron 30.0%
ATTTGCCATAGTATAGTAAG+GGG + chr4.1:17380393-17380412 None:intergenic 30.0%
CAACACTTAAACAGGAATAT+TGG + chr4.1:17378589-17378608 None:intergenic 30.0%
CAATAAAACTGCTTGATACA+AGG + chr4.1:17378192-17378211 None:intergenic 30.0%
CAATAAACTACGAATTTGGT+GGG + chr4.1:17378620-17378639 None:intergenic 30.0%
CCCACATTTGAAAAGTTATA+GGG - chr4.1:17377757-17377776 MS.gene08380:intron 30.0%
CCTACTGTTTCAAAATTTCA+CGG - chr4.1:17379157-17379176 MS.gene08380:intron 30.0%
CTACTGTTTCAAAATTTCAC+GGG - chr4.1:17379158-17379177 MS.gene08380:intron 30.0%
CTTTGTAATAAATGACGCAT+CGG + chr4.1:17376356-17376375 None:intergenic 30.0%
GAAATTTACTGGCAAAGAAA+GGG - chr4.1:17380233-17380252 MS.gene08380:intron 30.0%
GAAGTAAATCATGGAGAAAA+TGG + chr4.1:17377415-17377434 None:intergenic 30.0%
GATTTGCCATAGTATAGTAA+GGG + chr4.1:17380394-17380413 None:intergenic 30.0%
GGACACAATAACTTGATATA+GGG + chr4.1:17379401-17379420 None:intergenic 30.0%
GGTTAATATTAGGAACAGTA+GGG - chr4.1:17377778-17377797 MS.gene08380:intron 30.0%
GTTAACATCCTAATATAGTG+TGG - chr4.1:17376264-17376283 MS.gene08380:CDS 30.0%
GTTAATATTAGGAACAGTAG+GGG - chr4.1:17377779-17377798 MS.gene08380:intron 30.0%
TAAATTCTCACAATCCAGAT+AGG + chr4.1:17379514-17379533 None:intergenic 30.0%
TACTGTTTCAAAATTTCACG+GGG - chr4.1:17379159-17379178 MS.gene08380:intron 30.0%
TCAATAAACTACGAATTTGG+TGG + chr4.1:17378621-17378640 None:intergenic 30.0%
TCATATGTGATATGAAACAC+AGG - chr4.1:17377198-17377217 MS.gene08380:intron 30.0%
TCCCACATTTGAAAAGTTAT+AGG - chr4.1:17377756-17377775 MS.gene08380:intron 30.0%
TCGTTTAGGCAAGAAAATTA+GGG + chr4.1:17379423-17379442 None:intergenic 30.0%
TCTATAGGTTTCAAAAACCA+GGG - chr4.1:17378308-17378327 MS.gene08380:CDS 30.0%
TGCTGAAGAAAAATGGAAAT+GGG - chr4.1:17377653-17377672 MS.gene08380:intron 30.0%
TGGATTCCAGATAATTTGAA+TGG - chr4.1:17380612-17380631 MS.gene08380:intron 30.0%
TTAATTACTAGACTGTTGTC+AGG - chr4.1:17379601-17379620 MS.gene08380:intron 30.0%
TTAGGATTAGGATTAGGATT+AGG - chr4.1:17376080-17376099 MS.gene08380:CDS 30.0%
TTCAAGGAATGTTATTGTCA+TGG - chr4.1:17379684-17379703 MS.gene08380:intron 30.0%
TTCATTGTCCACACTATATT+AGG + chr4.1:17376275-17376294 None:intergenic 30.0%
TTTAGAGAGAACATGCAATT+TGG - chr4.1:17379017-17379036 MS.gene08380:intron 30.0%
! ACCCTATAACTTTTCAAATG+TGG + chr4.1:17377761-17377780 None:intergenic 30.0%
! ATTATGGTGCTGAAGAAAAA+TGG - chr4.1:17377646-17377665 MS.gene08380:intron 30.0%
! CAATATGCTGTGTTTTTCAT+TGG - chr4.1:17378019-17378038 MS.gene08380:intron 30.0%
! CCCTATAACTTTTCAAATGT+GGG + chr4.1:17377760-17377779 None:intergenic 30.0%
! TCTCTTTGGAAGTCTTTAAT+AGG - chr4.1:17379742-17379761 MS.gene08380:intron 30.0%
!! AAAGTATAGTATTGGCATGT+GGG + chr4.1:17376554-17376573 None:intergenic 30.0%
!! TTATTTATGGGATTAGCCAT+CGG - chr4.1:17378262-17378281 MS.gene08380:CDS 30.0%
!!! GGTGTTTTAATGTAACAGAT+AGG - chr4.1:17376230-17376249 MS.gene08380:CDS 30.0%
!!! TATCAAGCAGTTTTATTGTG+TGG - chr4.1:17378194-17378213 MS.gene08380:CDS 30.0%
!!! TGGTTTTTGAAACCTATAGA+GGG + chr4.1:17378308-17378327 None:intergenic 30.0%
AAAAACACAGCATATTGTGC+AGG + chr4.1:17378016-17378035 None:intergenic 35.0%
AAAGCTTGTCCATTTATCCT+AGG - chr4.1:17377119-17377138 MS.gene08380:intron 35.0%
AAAGGCTTACCTAGGATAAA+TGG + chr4.1:17377131-17377150 None:intergenic 35.0%
AAAGGTTATTATCCCATCCA+GGG + chr4.1:17379187-17379206 None:intergenic 35.0%
ACTATAAACCTGTCATAGAC+AGG + chr4.1:17380201-17380220 None:intergenic 35.0%
ATGGGATAATAACCTTTGGA+TGG - chr4.1:17379190-17379209 MS.gene08380:CDS 35.0%
CACAAACAATGTTGACATCT+GGG + chr4.1:17380082-17380101 None:intergenic 35.0%
CCAATTGCAAGGAAATTTAC+TGG - chr4.1:17380222-17380241 MS.gene08380:intron 35.0%
CCAGTAAATTTCCTTGCAAT+TGG + chr4.1:17380225-17380244 None:intergenic 35.0%
CGATGCGTCATTTATTACAA+AGG - chr4.1:17376354-17376373 MS.gene08380:CDS 35.0%
CGTTTAGGCAAGAAAATTAG+GGG + chr4.1:17379422-17379441 None:intergenic 35.0%
CTATAAACCTGTCATAGACA+GGG + chr4.1:17380200-17380219 None:intergenic 35.0%
CTATAGGTTTCAAAAACCAG+GGG - chr4.1:17378309-17378328 MS.gene08380:CDS 35.0%
CTCCCAATAAGAAATACTGA+GGG + chr4.1:17380416-17380435 None:intergenic 35.0%
CTCTATAGGTTTCAAAAACC+AGG - chr4.1:17378307-17378326 MS.gene08380:CDS 35.0%
GATCATAGTACACTCAAAAC+TGG + chr4.1:17377691-17377710 None:intergenic 35.0%
GCAACATTTATACCATCCAA+AGG + chr4.1:17379205-17379224 None:intergenic 35.0%
GCATATGAAAAGGGAAAACA+GGG + chr4.1:17376881-17376900 None:intergenic 35.0%
GCTAATCCCATAAATAAAGC+AGG + chr4.1:17378259-17378278 None:intergenic 35.0%
GGAAATTTACTGGCAAAGAA+AGG - chr4.1:17380232-17380251 MS.gene08380:intron 35.0%
GGATTTGCCATAGTATAGTA+AGG + chr4.1:17380395-17380414 None:intergenic 35.0%
GGGACACAATAACTTGATAT+AGG + chr4.1:17379402-17379421 None:intergenic 35.0%
GGGTTAATATTAGGAACAGT+AGG - chr4.1:17377777-17377796 MS.gene08380:intron 35.0%
GGTTTATAGTTCCAATTGCA+AGG - chr4.1:17380211-17380230 MS.gene08380:intron 35.0%
GTATCACTCATAACCAGATA+TGG - chr4.1:17376786-17376805 MS.gene08380:intron 35.0%
GTCACACTTGCAAAAAACAA+GGG - chr4.1:17378535-17378554 MS.gene08380:CDS 35.0%
GTGCTGAAGAAAAATGGAAA+TGG - chr4.1:17377652-17377671 MS.gene08380:intron 35.0%
TAAAATTGTTGTCTCGTGCA+GGG - chr4.1:17377908-17377927 MS.gene08380:intron 35.0%
TAACTTACTTCTCTACACGA+GGG - chr4.1:17380577-17380596 MS.gene08380:intron 35.0%
TAGTAGTCTCTTGTACGAAA+CGG - chr4.1:17378405-17378424 MS.gene08380:CDS 35.0%
TATAGGTTTCAAAAACCAGG+GGG - chr4.1:17378310-17378329 MS.gene08380:CDS 35.0%
TCAACATTGTTTGTGGAACA+AGG - chr4.1:17380087-17380106 MS.gene08380:intron 35.0%
TCTGTCACAATCATCAAAGT+TGG - chr4.1:17378987-17379006 MS.gene08380:intron 35.0%
TCTTCCCTATGATGAACTAT+TGG - chr4.1:17376995-17377014 MS.gene08380:intron 35.0%
TGAAATGAAAAGGCTTACCT+AGG + chr4.1:17377139-17377158 None:intergenic 35.0%
TGACCTCCATTCAAATTATC+TGG + chr4.1:17380621-17380640 None:intergenic 35.0%
TGTATGGAAATGAAGTCGAT+TGG + chr4.1:17376587-17376606 None:intergenic 35.0%
TGTTGTAATGTTCTCAACCT+TGG - chr4.1:17378513-17378532 MS.gene08380:CDS 35.0%
TTGCACATAATCTACCTATC+TGG - chr4.1:17379497-17379516 MS.gene08380:CDS 35.0%
TTGCTCAATAGTGTGCAATA+CGG + chr4.1:17378868-17378887 None:intergenic 35.0%
TTTAGAAGAAAAAGAGACGC+CGG + chr4.1:17378912-17378931 None:intergenic 35.0%
TTTCTCCTATGATATACTGC+TGG - chr4.1:17377493-17377512 MS.gene08380:intron 35.0%
! AAATTATCTGGAATCCATCC+AGG + chr4.1:17380609-17380628 None:intergenic 35.0%
! ACAGATCTAGAGTTTAACGA+GGG + chr4.1:17378972-17378991 None:intergenic 35.0%
! ACTATCAAGGGCATATGAAA+AGG + chr4.1:17376891-17376910 None:intergenic 35.0%
! AGATGTGTTATTGAATCCTG+CGG + chr4.1:17376531-17376550 None:intergenic 35.0%
! AGTTCTAGCAGATTCTTACT+GGG - chr4.1:17377371-17377390 MS.gene08380:intron 35.0%
! ATACCCTTTTATAACCCTTC+CGG - chr4.1:17378890-17378909 MS.gene08380:intron 35.0%
! ATAGTATAGTAAGGGGTACA+GGG + chr4.1:17380386-17380405 None:intergenic 35.0%
! CTATCAAGGGCATATGAAAA+GGG + chr4.1:17376890-17376909 None:intergenic 35.0%
! CTTCTCTTTTTCCGTTTTCA+AGG - chr4.1:17379668-17379687 MS.gene08380:intron 35.0%
! GCGTCTCTTTTTCTTCTAAA+GGG - chr4.1:17378912-17378931 MS.gene08380:intron 35.0%
! GTTTTCAGTCATGTATCTTG+TGG - chr4.1:17376677-17376696 MS.gene08380:CDS 35.0%
! TAATAGGTTGAGAAATCCTC+TGG - chr4.1:17379758-17379777 MS.gene08380:intron 35.0%
! TACCTGCACCATTGAAATTT+TGG + chr4.1:17379059-17379078 None:intergenic 35.0%
! TTTTCGGAGTTGCAAAGAAT+GGG - chr4.1:17380258-17380277 MS.gene08380:intron 35.0%
!! AAGGCTTTTTAAAGACCAAC+TGG + chr4.1:17378716-17378735 None:intergenic 35.0%
!! AGAAGGGATCATTTTTCAAC+TGG - chr4.1:17378140-17378159 MS.gene08380:CDS 35.0%
!! ATTGTCATGGACAGTTTTGT+AGG - chr4.1:17379697-17379716 MS.gene08380:intron 35.0%
!! GAAAGTATAGTATTGGCATG+TGG + chr4.1:17376555-17376574 None:intergenic 35.0%
!! GGCATTCCTGCTTTATTTAT+GGG - chr4.1:17378250-17378269 MS.gene08380:CDS 35.0%
!! TCAGGTTTTCTCTTTTGAGT+TGG - chr4.1:17379619-17379638 MS.gene08380:intron 35.0%
!!! ATTTTGAAACAGTAGGTTGC+TGG + chr4.1:17379153-17379172 None:intergenic 35.0%
!!! CCGTGAAATTTTGAAACAGT+AGG + chr4.1:17379160-17379179 None:intergenic 35.0%
!!! CTGGTTTTTGAAACCTATAG+AGG + chr4.1:17378309-17378328 None:intergenic 35.0%
!!! CTTTTTGAGATAGTGTTGCT+GGG - chr4.1:17376459-17376478 MS.gene08380:CDS 35.0%
!!! GGTTTTTGAAACCTATAGAG+GGG + chr4.1:17378307-17378326 None:intergenic 35.0%
!!! GTACACTCAAAACTGGTTTT+TGG + chr4.1:17377684-17377703 None:intergenic 35.0%
!!! GTCATCTCGATTACTTTTTC+TGG - chr4.1:17380637-17380656 MS.gene08380:intron 35.0%
!!! TACTTTTTCTGGCTTTTAGC+TGG - chr4.1:17380648-17380667 MS.gene08380:intron 35.0%
!!! TCTTTTTGAGATAGTGTTGC+TGG - chr4.1:17376458-17376477 MS.gene08380:CDS 35.0%
!!! TTCCCTAGTTTTTTGACACA+AGG - chr4.1:17379080-17379099 MS.gene08380:intron 35.0%
!!! TTCTCTTTTGAGTTGGCTAA+TGG - chr4.1:17379626-17379645 MS.gene08380:intron 35.0%
!!! TTTTTGAGATAGTGTTGCTG+GGG - chr4.1:17376460-17376479 MS.gene08380:CDS 35.0%
AACTTACTTCTCTACACGAG+GGG - chr4.1:17380578-17380597 MS.gene08380:intron 40.0%
ACAAGAGACTACTATCCTCA+GGG + chr4.1:17378399-17378418 None:intergenic 40.0%
ACATGAAGGAAATGTCTCTG+CGG - chr4.1:17377293-17377312 MS.gene08380:intron 40.0%
ACTACGATTGTTGGTCGATT+TGG - chr4.1:17376755-17376774 MS.gene08380:intron 40.0%
AGCCAAAATTTCAATGGTGC+AGG - chr4.1:17379054-17379073 MS.gene08380:intron 40.0%
AGTAAGCTTTACACAGGAGA+TGG - chr4.1:17377044-17377063 MS.gene08380:intron 40.0%
ATTCAAGAAAATGCAGGCTG+GGG - chr4.1:17378217-17378236 MS.gene08380:CDS 40.0%
CAAAGGTTATTATCCCATCC+AGG + chr4.1:17379188-17379207 None:intergenic 40.0%
CATAGCCAGCAGTATATCAT+AGG + chr4.1:17377501-17377520 None:intergenic 40.0%
CCACAAACAATGTTGACATC+TGG + chr4.1:17380083-17380102 None:intergenic 40.0%
CCAGATGTCAACATTGTTTG+TGG - chr4.1:17380080-17380099 MS.gene08380:intron 40.0%
CTATCCTATCAGTCATTGTC+AGG + chr4.1:17378749-17378768 None:intergenic 40.0%
CTGACAATGACTGATAGGAT+AGG - chr4.1:17378747-17378766 MS.gene08380:intron 40.0%
CTGGATGGGATAATAACCTT+TGG - chr4.1:17379186-17379205 MS.gene08380:intron 40.0%
CTGTACCCCTTACTATACTA+TGG - chr4.1:17380385-17380404 MS.gene08380:intron 40.0%
GAAGAGAGTAAGCTTTACAC+AGG - chr4.1:17377038-17377057 MS.gene08380:intron 40.0%
GAGTTCTTTCATTCTCACTG+TGG - chr4.1:17380554-17380573 MS.gene08380:intron 40.0%
GAGTTGCAAAGAATGGGAAT+TGG - chr4.1:17380264-17380283 MS.gene08380:intron 40.0%
GATTCAAGAAAATGCAGGCT+GGG - chr4.1:17378216-17378235 MS.gene08380:CDS 40.0%
GCCTAAAAAGAAACTTCCGA+TGG + chr4.1:17378281-17378300 None:intergenic 40.0%
GCTCCCAATAAGAAATACTG+AGG + chr4.1:17380417-17380436 None:intergenic 40.0%
GGCATATGAAAAGGGAAAAC+AGG + chr4.1:17376882-17376901 None:intergenic 40.0%
GGTCACACTTGCAAAAAACA+AGG - chr4.1:17378534-17378553 MS.gene08380:CDS 40.0%
GTAAAATTGTTGTCTCGTGC+AGG - chr4.1:17377907-17377926 MS.gene08380:intron 40.0%
GTAACTTACTTCTCTACACG+AGG - chr4.1:17380576-17380595 MS.gene08380:intron 40.0%
GTGGTGACTATTCTAACCTT+TGG - chr4.1:17379962-17379981 MS.gene08380:intron 40.0%
GTGTGGATTCAAGAAAATGC+AGG - chr4.1:17378211-17378230 MS.gene08380:CDS 40.0%
GTTCTAGCAGATTCTTACTG+GGG - chr4.1:17377372-17377391 MS.gene08380:intron 40.0%
TACAAGAGACTACTATCCTC+AGG + chr4.1:17378400-17378419 None:intergenic 40.0%
TAGAGCATAGTGATGAACTG+AGG - chr4.1:17378464-17378483 MS.gene08380:CDS 40.0%
TATTTGGGGACTACGATTGT+TGG - chr4.1:17376746-17376765 MS.gene08380:intron 40.0%
TCACTTCTGACTACTTCACT+GGG - chr4.1:17380522-17380541 MS.gene08380:intron 40.0%
TGCTCGAGAAGGAATAAGTT+TGG + chr4.1:17377713-17377732 None:intergenic 40.0%
TGTATATGTAAGGGTCCAGT+TGG - chr4.1:17378698-17378717 MS.gene08380:intron 40.0%
TGTGAACGTTTGGCATACTA+CGG - chr4.1:17377231-17377250 MS.gene08380:intron 40.0%
TTAAGCAGAATACTGGCAAC+TGG - chr4.1:17377096-17377115 MS.gene08380:intron 40.0%
TTGCGGATATAGCACTTGAA+TGG - chr4.1:17376387-17376406 MS.gene08380:CDS 40.0%
! AAACCATGTGTGTCCTCTTT+TGG - chr4.1:17378076-17378095 MS.gene08380:intron 40.0%
! AAACTACGAATTTGGTGGGA+AGG + chr4.1:17378616-17378635 None:intergenic 40.0%
! AAATGAGTGCTGTGAACGTT+TGG - chr4.1:17377221-17377240 MS.gene08380:intron 40.0%
! AACCATGTGTGTCCTCTTTT+GGG - chr4.1:17378077-17378096 MS.gene08380:intron 40.0%
! AGTTTGATGATACTGATCCC+CGG - chr4.1:17378107-17378126 MS.gene08380:intron 40.0%
! ATGTAGCTTGCGAGTAAGAT+AGG + chr4.1:17377277-17377296 None:intergenic 40.0%
! CAGATCTAGAGTTTAACGAG+GGG + chr4.1:17378971-17378990 None:intergenic 40.0%
! CAGTTCTAGCAGATTCTTAC+TGG - chr4.1:17377370-17377389 MS.gene08380:intron 40.0%
! CATAGTATAGTAAGGGGTAC+AGG + chr4.1:17380387-17380406 None:intergenic 40.0%
! CTTTTCGGAGTTGCAAAGAA+TGG - chr4.1:17380257-17380276 MS.gene08380:intron 40.0%
! GACAGATCTAGAGTTTAACG+AGG + chr4.1:17378973-17378992 None:intergenic 40.0%
! GCCATCGGAAGTTTCTTTTT+AGG - chr4.1:17378277-17378296 MS.gene08380:CDS 40.0%
! GGCGTCTCTTTTTCTTCTAA+AGG - chr4.1:17378911-17378930 MS.gene08380:intron 40.0%
! TATCATCTGATGAGAGTGCA+TGG + chr4.1:17378844-17378863 None:intergenic 40.0%
!! ACAAAGGTGTCGTCAAATTG+CGG - chr4.1:17376370-17376389 MS.gene08380:CDS 40.0%
!! AGCAGAAGTATTCACATTCG+TGG - chr4.1:17380437-17380456 MS.gene08380:intron 40.0%
!! ATGGCTCGGTTGACTTTAAA+GGG - chr4.1:17377063-17377082 MS.gene08380:intron 40.0%
!! CAGAAGTATTCACATTCGTG+GGG - chr4.1:17380439-17380458 MS.gene08380:intron 40.0%
!! CGGCATTCCTGCTTTATTTA+TGG - chr4.1:17378249-17378268 MS.gene08380:CDS 40.0%
!! GCAGAAGTATTCACATTCGT+GGG - chr4.1:17380438-17380457 MS.gene08380:intron 40.0%
!!! GTTTTTTGCAAGTGTGACCA+AGG + chr4.1:17378533-17378552 None:intergenic 40.0%
AAACTGATCTGCCCCAAAAG+AGG + chr4.1:17378092-17378111 None:intergenic 45.0%
AAGAAAAAGAGACGCCGGAA+GGG + chr4.1:17378907-17378926 None:intergenic 45.0%
AAGGCGTGCAACACTTAAAC+AGG + chr4.1:17378597-17378616 None:intergenic 45.0%
ACCTGGCACATTCTTGTAAG+AGG + chr4.1:17378340-17378359 None:intergenic 45.0%
ACGCCGGAAGGGTTATAAAA+GGG + chr4.1:17378896-17378915 None:intergenic 45.0%
ACGCGATGAATCTTCCTCTA+CGG + chr4.1:17375894-17375913 None:intergenic 45.0%
ACTTACTTCTCTACACGAGG+GGG - chr4.1:17380579-17380598 MS.gene08380:intron 45.0%
AGCACTGCATAAACTTCGCA+TGG + chr4.1:17380499-17380518 None:intergenic 45.0%
ATAATGCCAGTAGCCCAAAC+TGG + chr4.1:17380042-17380061 None:intergenic 45.0%
ATCCCTTCTTAACCCTTTCC+CGG + chr4.1:17378129-17378148 None:intergenic 45.0%
ATGCAAATACGGCAACACAC+TGG + chr4.1:17379331-17379350 None:intergenic 45.0%
ATGTTTCCAGTTTGGGCTAC+TGG - chr4.1:17380033-17380052 MS.gene08380:intron 45.0%
ATTCTTACTGGGGACGATAC+TGG - chr4.1:17377382-17377401 MS.gene08380:intron 45.0%
ATTGAAGCCTGCTGAGTGTT+TGG - chr4.1:17377967-17377986 MS.gene08380:intron 45.0%
CAGCCTATGGGGAACAATAA+TGG + chr4.1:17378944-17378963 None:intergenic 45.0%
CATAAACTTCGCATGGCATC+TGG + chr4.1:17380492-17380511 None:intergenic 45.0%
CCAGTATTCTGCTTAAGCAC+GGG + chr4.1:17377092-17377111 None:intergenic 45.0%
CCTATCAGTCATTGTCAGGT+GGG + chr4.1:17378745-17378764 None:intergenic 45.0%
CCTGGCACATTCTTGTAAGA+GGG + chr4.1:17378339-17378358 None:intergenic 45.0%
CTGGGGTTTGTACCAATTCA+TGG - chr4.1:17376477-17376496 MS.gene08380:CDS 45.0%
CTTACTCGCAAGCTACATGA+AGG - chr4.1:17377279-17377298 MS.gene08380:intron 45.0%
GACAAGAGCTCTGCAATTGA+AGG - chr4.1:17378430-17378449 MS.gene08380:CDS 45.0%
GATCCGCATGTTTCCAGTTT+GGG - chr4.1:17380026-17380045 MS.gene08380:intron 45.0%
GCCAGTATTCTGCTTAAGCA+CGG + chr4.1:17377093-17377112 None:intergenic 45.0%
GCTCTGCAATTGAAGGAAGT+CGG - chr4.1:17378437-17378456 MS.gene08380:CDS 45.0%
GGAACAAGTGATCAGTCTTC+AGG + chr4.1:17379380-17379399 None:intergenic 45.0%
GGAAGATTCATCGCGTACTT+TGG - chr4.1:17375898-17375917 MS.gene08380:CDS 45.0%
GGATTCAAGAAAATGCAGGC+TGG - chr4.1:17378215-17378234 MS.gene08380:CDS 45.0%
GTCACTTCTGACTACTTCAC+TGG - chr4.1:17380521-17380540 MS.gene08380:intron 45.0%
TACAAGAATGTGCCAGGTTG+TGG - chr4.1:17378342-17378361 MS.gene08380:CDS 45.0%
TAGCCCAAACTGGAAACATG+CGG + chr4.1:17380032-17380051 None:intergenic 45.0%
TCAAAAGTTGAGAGGGAAGC+TGG + chr4.1:17380153-17380172 None:intergenic 45.0%
TCACAGTGCAAAGTCTCCAA+AGG + chr4.1:17379981-17380000 None:intergenic 45.0%
TCCTATCAGTCATTGTCAGG+TGG + chr4.1:17378746-17378765 None:intergenic 45.0%
TCGCCATTATTGTTCCCCAT+AGG - chr4.1:17378938-17378957 MS.gene08380:intron 45.0%
TCTGATGCTGAGAGGAAAAG+TGG - chr4.1:17379943-17379962 MS.gene08380:intron 45.0%
TGATCCGCATGTTTCCAGTT+TGG - chr4.1:17380025-17380044 MS.gene08380:intron 45.0%
TGTGCAAAGTTGCGCGATAA+AGG + chr4.1:17379484-17379503 None:intergenic 45.0%
TGTTACCTTGCACCTCTCAT+TGG - chr4.1:17377345-17377364 MS.gene08380:intron 45.0%
TTGAAGCCTGCTGAGTGTTT+GGG - chr4.1:17377968-17377987 MS.gene08380:intron 45.0%
! ACCATGTGTGTCCTCTTTTG+GGG - chr4.1:17378078-17378097 MS.gene08380:intron 45.0%
! AGGTTGTGGCAGCATCTTTT+CGG - chr4.1:17378356-17378375 MS.gene08380:CDS 45.0%
! ATCTGATGAGAGTGCATGGT+CGG + chr4.1:17378840-17378859 None:intergenic 45.0%
! ATCTTTTCGGAAGCGGAATC+TGG - chr4.1:17378369-17378388 MS.gene08380:CDS 45.0%
! ATTATAGTCGGTGCTCGAGA+AGG + chr4.1:17377724-17377743 None:intergenic 45.0%
! GTTTGATGATACTGATCCCC+GGG - chr4.1:17378108-17378127 MS.gene08380:intron 45.0%
! TCTCTGCTGCTTATGTGGAT+TGG - chr4.1:17376502-17376521 MS.gene08380:CDS 45.0%
! TGGCAAAGAAAGGGGCTTTT+CGG - chr4.1:17380242-17380261 MS.gene08380:intron 45.0%
! TTTTAGGCACACCCCTCTAT+AGG - chr4.1:17378293-17378312 MS.gene08380:CDS 45.0%
!! ACGATTGTTGGTCGATTTGG+TGG - chr4.1:17376758-17376777 MS.gene08380:intron 45.0%
!! GATGGCTCGGTTGACTTTAA+AGG - chr4.1:17377062-17377081 MS.gene08380:intron 45.0%
!! GGAAGAAGCTCTTGTTGTTC+AGG - chr4.1:17375919-17375938 MS.gene08380:CDS 45.0%
!! TTATGTGGATTGGTTTCCGC+AGG - chr4.1:17376512-17376531 MS.gene08380:CDS 45.0%
AAAGTTGAGAGGGAAGCTGG+TGG + chr4.1:17380150-17380169 None:intergenic 50.0%
AACGAGGGGATATCAGCCTA+TGG + chr4.1:17378957-17378976 None:intergenic 50.0%
AAGTTGAGAGGGAAGCTGGT+GGG + chr4.1:17380149-17380168 None:intergenic 50.0%
ACGAGGGGATATCAGCCTAT+GGG + chr4.1:17378956-17378975 None:intergenic 50.0%
ACTTTGCACTGTGACACAGG+TGG - chr4.1:17379987-17380006 MS.gene08380:intron 50.0%
AGACACGTCACTACTTGGCA+AGG - chr4.1:17377318-17377337 MS.gene08380:intron 50.0%
AGGGGTCTGTATCTGCTTGA+TGG - chr4.1:17377797-17377816 MS.gene08380:intron 50.0%
ATGATACTGATCCCCGGGAA+AGG - chr4.1:17378113-17378132 MS.gene08380:intron 50.0%
ATTGTCAGGTGGGACAGACA+AGG + chr4.1:17378735-17378754 None:intergenic 50.0%
ATTGTGCAGGAGTAGCTGGA+GGG + chr4.1:17378003-17378022 None:intergenic 50.0%
CAAAATTTCACGGGGAACCC+TGG - chr4.1:17379167-17379186 MS.gene08380:intron 50.0%
CCCACCTGACAATGACTGAT+AGG - chr4.1:17378742-17378761 MS.gene08380:intron 50.0%
CCCGTGCTTAAGCAGAATAC+TGG - chr4.1:17377089-17377108 MS.gene08380:intron 50.0%
CCCTCTTACAAGAATGTGCC+AGG - chr4.1:17378336-17378355 MS.gene08380:CDS 50.0%
CTGTAGTCTCTGATGCTGAG+AGG - chr4.1:17379935-17379954 MS.gene08380:intron 50.0%
GAAAAGATGCTGCCACAACC+TGG + chr4.1:17378357-17378376 None:intergenic 50.0%
GAAGAAAAAGAGACGCCGGA+AGG + chr4.1:17378908-17378927 None:intergenic 50.0%
GACGCCGGAAGGGTTATAAA+AGG + chr4.1:17378897-17378916 None:intergenic 50.0%
GAGACTTTGCACTGTGACAC+AGG - chr4.1:17379984-17380003 MS.gene08380:intron 50.0%
GCAGCAGAGAGTCCATGAAT+TGG + chr4.1:17376492-17376511 None:intergenic 50.0%
GCATATTGTGCAGGAGTAGC+TGG + chr4.1:17378007-17378026 None:intergenic 50.0%
GCTAGAACTGCTCCAATGAG+AGG + chr4.1:17377360-17377379 None:intergenic 50.0%
GCTTTACACAGGAGATGGCT+CGG - chr4.1:17377049-17377068 MS.gene08380:intron 50.0%
GTCTCTACCTGATTGCGCTT+GGG - chr4.1:17378041-17378060 MS.gene08380:intron 50.0%
TATTGTGCAGGAGTAGCTGG+AGG + chr4.1:17378004-17378023 None:intergenic 50.0%
TCCCTTCTTAACCCTTTCCC+GGG + chr4.1:17378128-17378147 None:intergenic 50.0%
TGATACTGATCCCCGGGAAA+GGG - chr4.1:17378114-17378133 MS.gene08380:intron 50.0%
TGCAGATTGCGAACGAGCTT+GGG - chr4.1:17380343-17380362 MS.gene08380:intron 50.0%
TGTTGTCTCGTGCAGGGAAT+GGG - chr4.1:17377914-17377933 MS.gene08380:intron 50.0%
TTCGCATGGCATCTGGAGAT+TGG + chr4.1:17380485-17380504 None:intergenic 50.0%
TTGTTGTCTCGTGCAGGGAA+TGG - chr4.1:17377913-17377932 MS.gene08380:intron 50.0%
! ATAGTAAGGGGTACAGGGAC+AGG + chr4.1:17380381-17380400 None:intergenic 50.0%
! TGGACTCTCTGCTGCTTATG+TGG - chr4.1:17376497-17376516 MS.gene08380:CDS 50.0%
! TGGCAGCATCTTTTCGGAAG+CGG - chr4.1:17378362-17378381 MS.gene08380:CDS 50.0%
!! CATGTCAGCAGCTGCTGTTT+TGG - chr4.1:17380308-17380327 MS.gene08380:intron 50.0%
ATTTCACGGGGAACCCTGGA+TGG - chr4.1:17379171-17379190 MS.gene08380:intron 55.0%
CACTCAGCAGGCTTCAATGC+TGG + chr4.1:17377965-17377984 None:intergenic 55.0%
CCCCGGGAAAGGGTTAAGAA+GGG - chr4.1:17378124-17378143 MS.gene08380:intron 55.0%
CCCTTCTTAACCCTTTCCCG+GGG + chr4.1:17378127-17378146 None:intergenic 55.0%
CGAGGGGATATCAGCCTATG+GGG + chr4.1:17378955-17378974 None:intergenic 55.0%
CGGCAAGACACGTCACTACT+TGG - chr4.1:17377313-17377332 MS.gene08380:intron 55.0%
CTGCAGATTGCGAACGAGCT+TGG - chr4.1:17380342-17380361 MS.gene08380:intron 55.0%
GAAAATGCAGGCTGGGGTCT+TGG - chr4.1:17378223-17378242 MS.gene08380:CDS 55.0%
GCCCCAAAAGAGGACACACA+TGG + chr4.1:17378082-17378101 None:intergenic 55.0%
GGTCTCTACCTGATTGCGCT+TGG - chr4.1:17378040-17378059 MS.gene08380:intron 55.0%
TACCTGATTGCGCTTGGGAC+TGG - chr4.1:17378046-17378065 MS.gene08380:intron 55.0%
TCCCCGGGAAAGGGTTAAGA+AGG - chr4.1:17378123-17378142 MS.gene08380:intron 55.0%
TCTACACGAGGGGGAAATCC+TGG - chr4.1:17380588-17380607 MS.gene08380:intron 55.0%
TCTGGGTCCCTGTCTATGAC+AGG - chr4.1:17380190-17380209 MS.gene08380:intron 55.0%
TTGCACTGTGACACAGGTGG+AGG - chr4.1:17379990-17380009 MS.gene08380:intron 55.0%
TTTCACGGGGAACCCTGGAT+GGG - chr4.1:17379172-17379191 MS.gene08380:intron 55.0%
! CTGCTCCAATGAGAGGTGCA+AGG + chr4.1:17377353-17377372 None:intergenic 55.0%
CACCAGTCCCAAGCGCAATC+AGG + chr4.1:17378051-17378070 None:intergenic 60.0%
CACGAGGGGGAAATCCTGGA+TGG - chr4.1:17380592-17380611 MS.gene08380:intron 60.0%
CTGATTGCGCTTGGGACTGG+TGG - chr4.1:17378049-17378068 MS.gene08380:intron 60.0%
CTTGTAAGAGGGCTTCCCCC+TGG + chr4.1:17378328-17378347 None:intergenic 60.0%
GCAGCACCCAAACACTCAGC+AGG + chr4.1:17377977-17377996 None:intergenic 60.0%
GCAGGCTGGGGTCTTGGATT+CGG - chr4.1:17378229-17378248 MS.gene08380:CDS 60.0%
GCGGAATCTGGATGTCCCTG+AGG - chr4.1:17378381-17378400 MS.gene08380:CDS 60.0%
TGCGAACGAGCTTGGGCTTG+TGG - chr4.1:17380350-17380369 MS.gene08380:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 17375884 17380740 17375884 ID=MS.gene08380
chr4.1 mRNA 17375884 17380740 17375884 ID=MS.gene08380.t1;Parent=MS.gene08380
chr4.1 exon 17380684 17380740 17380684 ID=MS.gene08380.t1.exon1;Parent=MS.gene08380.t1
chr4.1 CDS 17380684 17380740 17380684 ID=cds.MS.gene08380.t1;Parent=MS.gene08380.t1
chr4.1 exon 17379484 17379589 17379484 ID=MS.gene08380.t1.exon2;Parent=MS.gene08380.t1
chr4.1 CDS 17379484 17379589 17379484 ID=cds.MS.gene08380.t1;Parent=MS.gene08380.t1
chr4.1 exon 17379187 17379404 17379187 ID=MS.gene08380.t1.exon3;Parent=MS.gene08380.t1
chr4.1 CDS 17379187 17379404 17379187 ID=cds.MS.gene08380.t1;Parent=MS.gene08380.t1
chr4.1 exon 17378139 17378695 17378139 ID=MS.gene08380.t1.exon4;Parent=MS.gene08380.t1
chr4.1 CDS 17378139 17378695 17378139 ID=cds.MS.gene08380.t1;Parent=MS.gene08380.t1
chr4.1 exon 17375884 17376706 17375884 ID=MS.gene08380.t1.exon5;Parent=MS.gene08380.t1
chr4.1 CDS 17375884 17376706 17375884 ID=cds.MS.gene08380.t1;Parent=MS.gene08380.t1
Gene Sequence

>MS.gene08380

ATGGGTTCCGTAGAGGAAGATTCATCGCGTACTTTGGAAGAAGCTCTTGTTGTTCAGGTTCAATTCTCTTTTTTCATTTTTCGCTTTTTTTCGTTGAGTCAACCCTCTATTTTTTTCTTTTCTTTCTATTGATTTGTTATTTATCACAATATTCATTCGCTCAGTATGAATCTTCCAATTACTATACTTATTATTATTAGGATTAGGATTAGGATTAGGACTCCATTCTTCAATTAATAAAATTAACTTATATAACTGGAAGCTTCAATTGTGTGTTTAAATAAAACACACCTTATTCAACTCTTGATCATAACATAACAATCATTAAATAATCAAAGACACAAATGGTGTTTTAATGTAACAGATAGGGTCTATTCAAAGTTAACATCCTAATATAGTGTGGACAATGAATAGGTCAAACTGTTGAGCTGTGTGAGCATGTAAAATTTGAACAAATCATTATTGTTTTCCGATGCGTCATTTATTACAAAGGTGTCGTCAAATTGCGGATATAGCACTTGAATGGACAGTTGTTTTCAGCGATCTGCAGTTTAAAACACTGTCTTGTATTTGTTCTTTTTGAGATAGTGTTGCTGGGGTTTGTACCAATTCATGGACTCTCTGCTGCTTATGTGGATTGGTTTCCGCAGGATTCAATAACACATCTCCCACATGCCAATACTATACTTTCTACTTTTGTCCAATCGACTTCATTTCCATACAATTATTATTAGGTTATTACAGTTGTAACTCATCCTAATCATAGTCACTATCTGATCTTCTCGTATGAACTGTTTTCAGTCATGTATCTTGTGGTTGTAAGTTAGACATGATAGTAGATCTATTTCAATGTTTTTATTACTATTTGGGGACTACGATTGTTGGTCGATTTGGTGGATAGAGTATCACTCATAACCAGATATGGAAATTACTCAAGTATCAACTACAGTACTTTGTTGTTCAAATCTACTTTATATTTAGTTAATTGTCAATACCCTGTTTTCCCTTTTCATATGCCCTTGATAGTTAAATGTCAAATAATTTTTTAATTTCAAATTGTGAAATAGCGAAATTGTTTTCTATAATCAGCATTATTTTTATTTTTTTTTACTCTTCCCTATGATGAACTATTGGTTATTTTTCATCTGAAGGATGAAGAGAGTAAGCTTTACACAGGAGATGGCTCGGTTGACTTTAAAGGGAGACCCGTGCTTAAGCAGAATACTGGCAACTGGAAAGCTTGTCCATTTATCCTAGGTAAGCCTTTTCATTTCACTTATGTAACAAATATTTATTTATTTTCTAAAGTTGAACTCATATGTGATATGAAACACAGGAAATGAGTGCTGTGAACGTTTGGCATACTACGGCATTGCAACAAATCTTGTTACCTATCTTACTCGCAAGCTACATGAAGGAAATGTCTCTGCGGCAAGACACGTCACTACTTGGCAAGGCACTTGTTACCTTGCACCTCTCATTGGAGCAGTTCTAGCAGATTCTTACTGGGGACGATACTGGACAATTGCCATTTTCTCCATGATTTACTTCATTGTAATTATAAACCAAGATATTTTTATTCTCCTATTTATAAAATTCTCTACACACATTTCTCCTATGATATACTGCTGGCTATGCATTATATAGTATCCTACATAATGTAATTTGTGATGGTAATAGGATGTCATCAAACCATTTCTAAATCTTCTTTATATGGGGAAGTTAAATTCTTTTATACATTTTATAGTTATAAGAAACAAATATTATGGTGCTGAAGAAAAATGGAAATGGGAGAATCCAAAAACCAGTTTTGAGTGTACTATGATCCAAACTTATTCCTTCTCGAGCACCGACTATAATACTCAAATTCATTCCCACATTTGAAAAGTTATAGGGTTAATATTAGGAACAGTAGGGGTCTGTATCTGCTTGATGGTATAATTGTATTCTCATCATTTTGTTTTTATGTGCATCATTTTCATCTACATGCTTTATATTCAAATGTCTTTACATGTTTTAATATGTAAAATTGTTGTCTCGTGCAGGGAATGGGTACATTAACTCTTTCTGCATCTATTCCAGCATTGAAGCCTGCTGAGTGTTTGGGTGCTGCATGCCCTCCAGCTACTCCTGCACAATATGCTGTGTTTTTCATTGGTCTCTACCTGATTGCGCTTGGGACTGGTGGCATTAAACCATGTGTGTCCTCTTTTGGGGCAGATCAGTTTGATGATACTGATCCCCGGGAAAGGGTTAAGAAGGGATCATTTTTCAACTGGTTTTACTTTTCTATCAACATAGGAGCCCTTGTATCAAGCAGTTTTATTGTGTGGATTCAAGAAAATGCAGGCTGGGGTCTTGGATTCGGCATTCCTGCTTTATTTATGGGATTAGCCATCGGAAGTTTCTTTTTAGGCACACCCCTCTATAGGTTTCAAAAACCAGGGGGAAGCCCTCTTACAAGAATGTGCCAGGTTGTGGCAGCATCTTTTCGGAAGCGGAATCTGGATGTCCCTGAGGATAGTAGTCTCTTGTACGAAACGGAAGACAAGAGCTCTGCAATTGAAGGAAGTCGGAAATTAGAGCATAGTGATGAACTGAGGTGATTATTCCCTTACTTTAAATTTAATGTTGTAATGTTCTCAACCTTGGTCACACTTGCAAAAAACAAGGGAGTATGTTCTGTGAAAAATAACTTATTCCCAATATTCCTGTTTAAGTGTTGCACGCCTTCCCACCAAATTCGTAGTTTATTGATTTAGAGTAATGTAATTTCAAATGTAAGCCCTACTCTAATGTTAAAAAAATGGAAGTTGTATATGTAAGGGTCCAGTTGGTCTTTAAAAAGCCTTGTCTGTCCCACCTGACAATGACTGATAGGATAGGATACCTAATATCATCTAACTTACTCTAGTGTTTGAAGTTCATAAACAGATAGCTGAACACTAACTATCCGACCATGCACTCTCATCAGATGATATCCGTATTGCACACTATTGAGCAATCATACCCTTTTATAACCCTTCCGGCGTCTCTTTTTCTTCTAAAGGGCACTCGCCATTATTGTTCCCCATAGGCTGATATCCCCTCGTTAAACTCTAGATCTGTCACAATCATCAAAGTTGGAGTACTATTTAGAGAGAACATGCAATTTGGTTTTACACATCTTTAGCCAAAATTTCAATGGTGCAGGTATTTCCCTAGTTTTTTGACACAAGGTTTTCACTGATTAAACTATCACCATTTTTGATTTTTTTTGGCTAATACCAGCAACCTACTGTTTCAAAATTTCACGGGGAACCCTGGATGGGATAATAACCTTTGGATGGTATAAATGTTGCTAGATTTATGATATTTCTTTCATTCACACATTCTGTATGAATTGCGTTGCTTTTGAGATCTATGATTTATTGGAAAAAAATTTCTTCTTTGCACTTATATTTGCCAGTGTGTTGCCGTATTTGCATTTTATATGAAAGCATATTTTTTTTATCCTGAAGACTGATCACTTGTTCCCTATATCAAGTTATTGTGTCCCCTAATTTTCTTGCCTAAACGATCACAATTAGACATTTATGTTGAACATTTTAGATTTTTCCTTTATCGCGCAACTTTGCACATAATCTACCTATCTGGATTGTGAGAATTTACTTTACAAGCTTTATTTACTTTCTCTCAAAAAGAAAAAAAGCTTTATTTACTTCGGACTTGCTATCTTTAATTACTAGACTGTTGTCAGGTTTTCTCTTTTGAGTTGGCTAATGGCTGATTCATTGTTTTCTTGCTTCTCTTTTTCCGTTTTCAAGGAATGTTATTGTCATGGACAGTTTTGTAGGATAGACTGCATGTAAACAATTTTCTCTTTGGAAGTCTTTAATAGGTTGAGAAATCCTCTGGTAAAAAATTTCTAATATTTAGCTTGTGTCCTAATAATAATTTGTGTTGATATCAATAAAGGCTTAAGTATGCTTACTTGCTTCAGAAGATTTCACACTCATTAACAGGGCTTTCTACTTTCCTTTGTTTTAATGAAGGTGTCTTGACAGAGCAGCTGTAGTCTCTGATGCTGAGAGGAAAAGTGGTGACTATTCTAACCTTTGGAGACTTTGCACTGTGACACAGGTGGAGGAATTGAAAATCTTGATCCGCATGTTTCCAGTTTGGGCTACTGGCATTATTTTTTCTGCTGTCTATGCCCAGATGTCAACATTGTTTGTGGAACAAGGAACTATGATGAACACTAGTATCGGTTCTTTCAAAATCCCACCAGCTTCCCTCTCAACTTTTGATGTAATTAGCGTTATTTTCTGGGTCCCTGTCTATGACAGGTTTATAGTTCCAATTGCAAGGAAATTTACTGGCAAAGAAAGGGGCTTTTCGGAGTTGCAAAGAATGGGAATTGGCCTTTTTATTTCTATCTTGTGCATGTCAGCAGCTGCTGTTTTGGAGATTAAACGTCTGCAGATTGCGAACGAGCTTGGGCTTGTGGATGAACCTGTCCCTGTACCCCTTACTATACTATGGCAAATCCCTCAGTATTTCTTATTGGGAGCAGCAGAAGTATTCACATTCGTGGGGCAGCTTGAGTTCTTCTATGACCAATCTCCAGATGCCATGCGAAGTTTATGCAGTGCTTTGTCACTTCTGACTACTTCACTGGGAAATTACTTGAGTTCTTTCATTCTCACTGTGGTAACTTACTTCTCTACACGAGGGGGAAATCCTGGATGGATTCCAGATAATTTGAATGGAGGTCATCTCGATTACTTTTTCTGGCTTTTAGCTGGACTTAGCTTCTTAAATATGTTGATGTACACAGTTGTTGCCAAAAGATACAAGAAAAAGAAGGCTTCTTAA
Protein sequence

>MS.gene08380.t1

MGSVEEDSSRTLEEALVVQDEESKLYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIATNLVTYLTRKLHEGNVSAARHVTTWQGTCYLAPLIGAVLADSYWGRYWTIAIFSMIYFIGMGTLTLSASIPALKPAECLGAACPPATPAQYAVFFIGLYLIALGTGGIKPCVSSFGADQFDDTDPRERVKKGSFFNWFYFSINIGALVSSSFIVWIQENAGWGLGFGIPALFMGLAIGSFFLGTPLYRFQKPGGSPLTRMCQVVAASFRKRNLDVPEDSSLLYETEDKSSAIEGSRKLEHSDELRCLDRAAVVSDAERKSGDYSNLWRLCTVTQVEELKILIRMFPVWATGIIFSAVYAQMSTLFVEQGTMMNTSIGSFKIPPASLSTFDVISVIFWVPVYDRFIVPIARKFTGKERGFSELQRMGIGLFISILCMSAAAVLEIKRLQIANELGLVDEPVPVPLTILWQIPQYFLLGAAEVFTFVGQLEFFYDQSPDAMRSLCSALSLLTTSLGNYLSSFILTVVTYFSTRGGNPGWIPDNLNGGHLDYFFWLLAGLSFLNMLMYTVVAKRYKKKKAS