AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09964

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09964.t1 MTR_5g012290 98.646 591 8 0 1 591 1 591 0.0 1202
MS.gene09964.t1 MTR_5g012270 74.614 583 144 3 1 580 1 582 0.0 908
MS.gene09964.t1 MTR_4g101380 71.886 594 163 4 1 591 1 593 0.0 862
MS.gene09964.t1 MTR_4g114340 57.168 572 219 9 11 573 8 562 0.0 576
MS.gene09964.t1 MTR_5g085850 50.624 561 250 5 15 570 18 556 0.0 528
MS.gene09964.t1 MTR_4g015080 45.601 557 291 8 17 570 24 571 9.52e-171 497
MS.gene09964.t1 MTR_7g067010 45.601 557 291 8 17 570 14 561 4.37e-167 488
MS.gene09964.t1 MTR_3g462710 44.265 558 299 7 17 570 14 563 2.25e-162 476
MS.gene09964.t1 MTR_5g055000 42.096 563 317 7 25 583 16 573 6.60e-155 457
MS.gene09964.t1 MTR_3g112460 40.283 566 318 9 17 579 13 561 6.63e-149 441
MS.gene09964.t1 MTR_3g112470 39.685 572 324 10 17 584 13 567 5.87e-145 431
MS.gene09964.t1 MTR_3g112450 39.930 571 320 8 14 576 10 565 1.60e-143 427
MS.gene09964.t1 MTR_7g098200 40.587 579 324 8 17 588 19 584 1.06e-142 426
MS.gene09964.t1 MTR_7g088825 37.828 571 340 6 21 588 16 574 2.54e-142 426
MS.gene09964.t1 MTR_7g098230 39.858 562 322 7 34 590 33 583 7.76e-138 414
MS.gene09964.t1 MTR_7g098200 40.069 579 317 9 17 588 19 574 1.04e-137 413
MS.gene09964.t1 MTR_1g075440 39.138 557 328 5 17 570 18 566 1.43e-136 410
MS.gene09964.t1 MTR_1g041835 39.930 571 331 5 17 584 17 578 2.43e-136 409
MS.gene09964.t1 MTR_7g098040 39.389 589 333 9 7 588 18 589 6.45e-136 409
MS.gene09964.t1 MTR_7g010820 38.462 585 340 6 11 583 10 586 6.23e-134 403
MS.gene09964.t1 MTR_1g041815 39.487 585 338 6 7 588 11 582 2.18e-133 402
MS.gene09964.t1 MTR_1g042310 38.095 567 336 7 7 570 10 564 1.66e-131 397
MS.gene09964.t1 MTR_3g462710 44.372 462 245 7 113 570 1 454 8.63e-131 391
MS.gene09964.t1 MTR_4g107670 38.783 575 316 10 17 571 14 572 9.82e-131 395
MS.gene09964.t1 MTR_7g098160 38.144 582 340 8 7 582 17 584 1.21e-130 395
MS.gene09964.t1 MTR_5g014150 36.851 578 354 6 11 583 28 599 2.30e-130 395
MS.gene09964.t1 MTR_7g088790 37.636 550 337 5 24 570 26 572 2.59e-130 395
MS.gene09964.t1 MTR_4g098800 36.380 569 342 7 7 567 16 572 3.39e-130 394
MS.gene09964.t1 MTR_7g005930 36.625 557 338 6 14 567 22 566 6.30e-130 393
MS.gene09964.t1 MTR_7g088820 35.112 581 366 8 17 591 17 592 7.89e-130 393
MS.gene09964.t1 MTR_4g098800 36.380 569 342 7 7 567 81 637 1.33e-129 394
MS.gene09964.t1 MTR_7g098090 38.370 589 334 10 7 582 17 589 3.65e-129 392
MS.gene09964.t1 MTR_2g005130 37.716 578 325 10 3 570 11 563 6.99e-129 390
MS.gene09964.t1 MTR_1g041875 38.779 557 323 6 17 570 19 560 7.07e-129 390
MS.gene09964.t1 MTR_3g100980 37.809 566 330 7 21 578 10 561 4.09e-128 388
MS.gene09964.t1 MTR_7g098180 36.815 584 353 6 5 582 9 582 2.81e-127 387
MS.gene09964.t1 MTR_8g469310 38.144 582 332 6 4 570 3 571 1.61e-126 384
MS.gene09964.t1 MTR_4g019580 38.095 567 332 11 10 571 18 570 5.81e-126 383
MS.gene09964.t1 MTR_7g098220 37.743 567 338 6 19 580 22 578 9.20e-126 383
MS.gene09964.t1 MTR_7g065080 38.095 567 326 11 10 571 13 559 2.72e-125 381
MS.gene09964.t1 MTR_0294s0020 38.569 573 317 9 11 578 15 557 1.06e-124 379
MS.gene09964.t1 MTR_7g013270 35.314 589 356 8 8 587 71 643 2.14e-124 381
MS.gene09964.t1 MTR_3g069500 38.313 569 326 10 6 570 13 560 4.57e-124 378
MS.gene09964.t1 MTR_4g033325 38.276 580 323 10 4 578 8 557 6.84e-124 377
MS.gene09964.t1 MTR_1g041885 39.842 507 287 6 50 553 5 496 1.75e-123 375
MS.gene09964.t1 MTR_1g042310 37.925 530 318 6 44 570 6 527 4.41e-123 374
MS.gene09964.t1 MTR_3g069420 36.364 572 343 9 6 570 12 569 5.12e-123 375
MS.gene09964.t1 MTR_5g038380 39.024 574 317 10 17 572 18 576 2.49e-122 373
MS.gene09964.t1 MTR_3g100980 36.027 594 330 8 21 578 10 589 5.64e-122 373
MS.gene09964.t1 MTR_3g072300 37.324 568 338 10 17 577 14 570 7.78e-122 372
MS.gene09964.t1 MTR_1g042310 37.977 524 314 6 50 570 5 520 1.05e-121 370
MS.gene09964.t1 MTR_1g116930 36.126 573 348 9 17 586 14 571 3.74e-121 370
MS.gene09964.t1 MTR_4g033315 38.324 561 313 9 17 572 21 553 2.69e-120 367
MS.gene09964.t1 MTR_4g033310 38.324 561 313 9 17 572 21 553 2.69e-120 367
MS.gene09964.t1 MTR_7g088820 35.350 529 333 7 69 591 5 530 3.78e-120 366
MS.gene09964.t1 MTR_3g069440 37.847 576 333 12 17 586 23 579 8.21e-120 367
MS.gene09964.t1 MTR_1g085090 36.204 569 327 11 25 583 17 559 1.06e-119 367
MS.gene09964.t1 MTR_5g038060 36.426 582 344 11 1 570 10 577 1.31e-119 367
MS.gene09964.t1 MTR_2g017750 37.018 570 342 11 17 572 24 590 1.35e-119 367
MS.gene09964.t1 MTR_3g005010 38.556 568 305 11 10 570 13 543 9.62e-119 363
MS.gene09964.t1 MTR_8g087810 37.716 578 343 10 17 580 11 585 1.31e-118 364
MS.gene09964.t1 MTR_7g111260 36.283 565 334 8 25 584 17 560 2.18e-118 363
MS.gene09964.t1 MTR_8g087780 37.694 581 338 12 17 580 11 584 4.70e-118 362
MS.gene09964.t1 MTR_7g098220 37.316 544 326 6 42 580 1 534 4.52e-117 359
MS.gene09964.t1 MTR_7g006540 36.972 568 334 6 24 576 60 618 5.16e-117 361
MS.gene09964.t1 MTR_4g033375 38.856 507 280 7 12 515 17 496 4.68e-115 352
MS.gene09964.t1 MTR_4g107580 31.894 602 388 8 1 588 1 594 5.33e-115 355
MS.gene09964.t1 MTR_4g033330 38.182 550 307 8 8 552 12 533 5.39e-113 348
MS.gene09964.t1 MTR_8g038880 36.332 567 328 8 25 578 16 562 5.87e-113 349
MS.gene09964.t1 MTR_8g469480 35.560 554 334 9 30 570 41 584 6.94e-113 350
MS.gene09964.t1 MTR_3g014790 36.136 559 330 7 25 576 15 553 3.65e-112 346
MS.gene09964.t1 MTR_7g088820 35.685 482 301 7 116 591 4 482 2.28e-110 339
MS.gene09964.t1 MTR_4g033395 38.856 507 280 7 12 515 17 496 3.72e-110 339
MS.gene09964.t1 MTR_4g107530 31.323 597 381 10 7 584 7 593 2.18e-109 340
MS.gene09964.t1 MTR_4g123537 35.811 592 352 10 7 591 21 591 5.49e-109 340
MS.gene09964.t1 MTR_4g107510 31.787 582 379 7 2 571 10 585 5.83e-109 339
MS.gene09964.t1 MTR_7g098200 38.831 479 277 7 115 588 3 470 4.60e-108 333
MS.gene09964.t1 MTR_7g065080 37.755 490 281 10 86 571 3 472 1.77e-107 332
MS.gene09964.t1 MTR_8g469470 32.538 587 374 8 3 574 6 585 6.09e-107 333
MS.gene09964.t1 MTR_7g098150 39.778 450 251 6 7 451 17 451 1.48e-101 317
MS.gene09964.t1 MTR_4g033325 37.500 472 260 10 112 578 18 459 2.54e-97 305
MS.gene09964.t1 MTR_5g038190 31.434 579 377 9 1 570 1 568 6.27e-96 305
MS.gene09964.t1 MTR_4g033325 37.946 448 252 9 136 578 7 433 5.25e-95 298
MS.gene09964.t1 MTR_2g101590 32.860 563 343 14 21 567 22 565 7.07e-95 304
MS.gene09964.t1 MTR_4g033385 36.842 475 268 8 109 578 13 460 8.48e-95 298
MS.gene09964.t1 MTR_4g011280 31.162 568 360 12 29 583 34 583 9.56e-93 297
MS.gene09964.t1 MTR_2g101640 31.818 572 357 12 11 567 9 562 2.10e-91 295
MS.gene09964.t1 MTR_2g101610 31.294 572 356 13 14 567 14 566 9.29e-91 293
MS.gene09964.t1 MTR_2g101650 29.016 579 384 11 25 590 22 586 1.26e-89 289
MS.gene09964.t1 MTR_8g103233 32.477 545 346 8 29 564 19 550 2.35e-89 288
MS.gene09964.t1 MTR_1g026740 31.884 552 358 11 23 567 13 553 1.58e-88 285
MS.gene09964.t1 MTR_2g093180 33.752 557 331 11 26 571 20 549 1.69e-87 282
MS.gene09964.t1 MTR_2g093160 32.252 555 341 12 26 571 20 548 7.03e-87 280
MS.gene09964.t1 MTR_4g024930 31.107 569 352 10 5 567 18 552 3.54e-86 279
MS.gene09964.t1 MTR_1g026750 32.852 554 346 12 25 567 16 554 1.10e-85 278
MS.gene09964.t1 MTR_4g107610 29.514 576 383 11 17 580 18 582 4.04e-81 267
MS.gene09964.t1 MTR_1g009200 31.365 542 351 10 29 561 29 558 8.53e-81 265
MS.gene09964.t1 MTR_7g051880 33.752 557 323 12 14 567 12 525 4.26e-80 262
MS.gene09964.t1 MTR_7g064780 29.795 584 381 12 16 585 15 583 6.12e-80 263
MS.gene09964.t1 MTR_2g101560 30.580 569 364 14 14 567 14 566 1.77e-79 263
MS.gene09964.t1 MTR_7g052600 34.173 556 322 12 14 567 12 525 1.96e-79 260
MS.gene09964.t1 MTR_1g026770 31.193 545 358 11 29 567 17 550 4.75e-79 260
MS.gene09964.t1 MTR_6g008690 32.007 553 316 12 43 572 23 538 1.27e-78 258
MS.gene09964.t1 MTR_2g093640 30.648 571 365 11 8 571 2 548 3.02e-78 258
MS.gene09964.t1 MTR_7g051830 33.513 558 323 12 14 567 12 525 2.91e-77 254
MS.gene09964.t1 MTR_1g057460 30.212 566 349 16 14 567 33 564 1.98e-75 251
MS.gene09964.t1 MTR_7g064800 29.310 580 387 9 23 587 22 593 8.69e-75 249
MS.gene09964.t1 MTR_7g098210 31.144 533 270 12 46 571 1 443 4.04e-71 236
MS.gene09964.t1 MTR_1g057460 30.476 525 321 15 55 567 1 493 1.80e-70 236
MS.gene09964.t1 MTR_0236s0050 30.667 525 320 16 55 567 1 493 3.04e-66 224
MS.gene09964.t1 MTR_4g033310 38.710 279 161 3 297 572 218 489 4.83e-59 205
MS.gene09964.t1 MTR_4g033310 39.888 178 96 2 17 194 21 187 7.02e-32 129
MS.gene09964.t1 MTR_1g009170 26.933 401 235 10 154 549 9 356 9.66e-37 141
MS.gene09964.t1 MTR_3g065350 39.634 164 92 2 340 503 1 157 6.98e-30 115
MS.gene09964.t1 MTR_4g033390 32.323 99 60 2 487 583 30 123 1.40e-13 68.2
MS.gene09964.t1 MTR_2g093650 40.625 96 54 2 355 449 41 134 2.80e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09964.t1 AT1G12110 62.906 585 209 5 3 583 2 582 0.0 743
MS.gene09964.t1 AT2G26690 56.128 563 226 6 11 567 8 555 0.0 594
MS.gene09964.t1 AT2G26690 55.140 535 219 6 39 567 3 522 0.0 550
MS.gene09964.t1 AT2G26690 54.857 525 216 6 49 567 1 510 0.0 536
MS.gene09964.t1 AT3G21670 51.510 563 247 6 14 570 16 558 0.0 535
MS.gene09964.t1 AT5G01180 42.908 557 307 6 17 570 15 563 1.16e-165 484
MS.gene09964.t1 AT5G01180 42.908 557 307 6 17 570 15 563 1.16e-165 484
MS.gene09964.t1 AT5G01180 42.908 557 307 6 17 570 15 563 1.16e-165 484
MS.gene09964.t1 AT3G54140 42.681 567 311 7 7 570 8 563 2.36e-163 478
MS.gene09964.t1 AT3G54140 42.681 567 311 7 7 570 8 563 2.36e-163 478
MS.gene09964.t1 AT2G02040 42.397 559 313 5 17 573 31 582 4.45e-159 468
MS.gene09964.t1 AT1G68570 43.082 571 311 8 7 570 5 568 7.41e-147 437
MS.gene09964.t1 AT1G68570 44.341 539 288 7 39 570 5 538 2.09e-144 429
MS.gene09964.t1 AT1G62200 39.115 565 328 6 6 565 30 583 5.37e-136 409
MS.gene09964.t1 AT1G59740 37.986 566 332 7 14 573 28 580 3.51e-132 399
MS.gene09964.t1 AT1G62200 37.838 592 327 8 6 565 30 612 5.99e-132 399
MS.gene09964.t1 AT1G62200 37.838 592 327 8 6 565 44 626 6.20e-132 400
MS.gene09964.t1 AT5G46050 36.934 574 344 8 17 585 17 577 2.71e-126 384
MS.gene09964.t1 AT5G46040 37.238 572 343 8 17 583 17 577 3.21e-125 381
MS.gene09964.t1 AT4G21680 38.121 564 329 6 17 569 18 572 5.06e-125 380
MS.gene09964.t1 AT2G02020 36.996 546 300 6 17 561 32 534 5.08e-125 379
MS.gene09964.t1 AT1G32450 36.201 558 346 6 17 567 27 581 1.96e-124 380
MS.gene09964.t1 AT2G37900 36.620 568 336 7 8 570 18 566 8.33e-124 377
MS.gene09964.t1 AT3G53960 38.179 571 331 10 8 570 17 573 3.09e-123 376
MS.gene09964.t1 AT1G69850 38.004 571 335 7 16 571 14 580 1.31e-122 374
MS.gene09964.t1 AT1G33440 38.342 579 327 11 17 586 28 585 2.16e-121 372
MS.gene09964.t1 AT1G72140 36.806 576 317 8 9 573 16 555 4.24e-121 369
MS.gene09964.t1 AT5G19640 37.569 543 315 7 28 567 60 581 4.85e-121 371
MS.gene09964.t1 AT2G40460 37.669 592 338 12 7 587 8 579 3.58e-119 365
MS.gene09964.t1 AT3G54450 34.690 565 346 7 24 583 9 555 2.05e-118 362
MS.gene09964.t1 AT1G27040 38.393 560 324 7 16 569 12 556 2.68e-118 362
MS.gene09964.t1 AT1G27040 38.393 560 324 7 16 569 16 560 3.22e-118 362
MS.gene09964.t1 AT5G13400 36.333 589 351 10 9 587 47 621 1.66e-117 362
MS.gene09964.t1 AT1G27040 39.286 532 308 7 41 569 9 528 8.27e-113 347
MS.gene09964.t1 AT1G69870 34.589 584 352 12 11 585 41 603 1.15e-112 350
MS.gene09964.t1 AT1G22540 38.998 559 310 8 17 570 20 552 3.34e-111 344
MS.gene09964.t1 AT5G62730 35.689 566 332 8 17 573 46 588 1.18e-110 343
MS.gene09964.t1 AT2G37900 36.217 497 294 6 79 571 11 488 3.85e-109 337
MS.gene09964.t1 AT1G22570 36.667 570 326 10 12 570 15 560 5.97e-108 336
MS.gene09964.t1 AT2G02020 35.165 546 289 9 17 561 32 513 1.11e-107 333
MS.gene09964.t1 AT1G72120 35.902 571 330 9 8 570 10 552 8.10e-107 332
MS.gene09964.t1 AT1G22550 35.026 571 335 9 11 570 14 559 5.52e-106 330
MS.gene09964.t1 AT5G62730 35.455 550 323 8 33 573 3 529 1.28e-105 328
MS.gene09964.t1 AT1G72125 34.555 573 339 11 8 570 10 556 6.46e-105 328
MS.gene09964.t1 AT1G72130 36.331 556 299 11 25 570 23 533 8.28e-103 322
MS.gene09964.t1 AT1G18880 31.712 555 357 8 30 571 22 567 1.98e-101 319
MS.gene09964.t1 AT5G46050 36.345 476 285 8 115 585 3 465 3.38e-98 307
MS.gene09964.t1 AT1G22570 36.213 544 312 10 38 570 4 523 9.85e-98 308
MS.gene09964.t1 AT1G52190 31.892 555 359 7 25 567 19 566 1.06e-97 310
MS.gene09964.t1 AT5G62680 32.500 560 346 11 30 570 46 592 2.98e-95 304
MS.gene09964.t1 AT3G25260 33.574 554 316 11 17 567 11 515 3.81e-95 301
MS.gene09964.t1 AT3G47960 32.914 556 347 10 30 570 64 608 5.60e-95 304
MS.gene09964.t1 AT3G16180 31.866 568 367 10 13 567 5 565 7.85e-94 300
MS.gene09964.t1 AT3G25280 33.874 555 321 12 16 567 10 521 6.38e-90 287
MS.gene09964.t1 AT3G45660 30.479 584 375 9 9 590 3 557 1.22e-88 285
MS.gene09964.t1 AT3G45660 30.479 584 375 9 9 590 3 557 1.22e-88 285
MS.gene09964.t1 AT3G45660 30.479 584 375 9 9 590 24 578 2.78e-88 285
MS.gene09964.t1 AT1G27080 32.451 567 348 12 29 585 16 557 9.60e-88 283
MS.gene09964.t1 AT3G45710 29.895 572 372 12 21 588 14 560 9.67e-84 272
MS.gene09964.t1 AT1G69860 30.261 575 369 11 4 571 1 550 2.39e-82 268
MS.gene09964.t1 AT3G45650 29.676 556 362 9 23 573 15 546 4.07e-81 265
MS.gene09964.t1 AT3G45680 29.277 567 368 10 26 587 19 557 1.53e-79 261
MS.gene09964.t1 AT1G72130 35.308 439 241 9 141 569 9 414 1.47e-78 254
MS.gene09964.t1 AT1G72130 35.308 439 241 9 141 569 9 414 1.47e-78 254
MS.gene09964.t1 AT5G14940 31.627 547 321 11 43 567 23 538 2.91e-78 258
MS.gene09964.t1 AT3G45720 29.831 533 336 11 46 570 38 540 2.32e-77 255
MS.gene09964.t1 AT1G27080 32.342 538 329 12 58 585 3 515 2.38e-77 255
MS.gene09964.t1 AT3G01350 30.900 589 346 11 24 583 4 560 6.18e-77 254
MS.gene09964.t1 AT5G28470 29.159 559 372 9 25 573 15 559 1.55e-76 253
MS.gene09964.t1 AT3G45650 28.351 582 362 10 23 573 15 572 4.75e-76 253
MS.gene09964.t1 AT3G45700 29.331 583 358 15 16 584 4 546 6.00e-76 251
MS.gene09964.t1 AT5G28470 28.980 559 371 10 25 573 15 557 1.80e-73 245
MS.gene09964.t1 AT3G45690 28.780 549 323 13 26 571 17 500 3.91e-68 230
MS.gene09964.t1 AT5G11570 26.916 535 306 9 37 567 23 476 4.53e-53 189
MS.gene09964.t1 AT2G38100 26.604 530 337 13 55 573 2 490 1.03e-42 160
MS.gene09964.t1 AT2G38100 26.604 530 337 13 55 573 24 512 2.40e-42 160
MS.gene09964.t1 AT2G38100 26.604 530 337 13 55 573 18 506 3.35e-42 159

Find 155 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGCAATCCATGGTTTATT+TGG 0.146472 5.2:+4733184 None:intergenic
CTCCTTTATGCTCTGTCTAT+TGG 0.183421 5.2:-4736866 MS.gene09964:CDS
TTAGAGTCTTCTTTGCATTT+TGG 0.212251 5.2:+4736262 None:intergenic
ATGTGGCATCCTTTGCTTCT+TGG 0.223376 5.2:+4735778 None:intergenic
ACTCGGCATCGCCGTTAATT+TGG 0.225881 5.2:-4736962 MS.gene09964:CDS
TCCTTTATGCTCTGTCTATT+GGG 0.231899 5.2:-4736865 MS.gene09964:CDS
TGGAGAGGCCTTTATGTATA+TGG 0.257387 5.2:-4733341 MS.gene09964:CDS
ATCCTTTGCTTCTTGGTCTT+AGG 0.272928 5.2:+4735785 None:intergenic
AATGTTGTTACTAATTTCTT+AGG 0.273061 5.2:-4736892 MS.gene09964:CDS
CTTGACCGGTACTATGCATT+TGG 0.289091 5.2:-4736932 MS.gene09964:CDS
ATGGATTGTCCAAAACATTA+TGG 0.311360 5.2:+4733726 None:intergenic
CATTATGGTTGTGGCCCATA+TGG 0.330752 5.2:+4733741 None:intergenic
TATAAATGTGGTGATATATT+TGG 0.333642 5.2:-4733104 MS.gene09964:CDS
TTTCGTAAGCATAGGGTCTT+TGG 0.338269 5.2:-4736062 MS.gene09964:CDS
AAATCTAGTGTCTCTGGCTT+TGG 0.347040 5.2:-4736157 MS.gene09964:CDS
GGGCCACAACCATAATGTTT+TGG 0.348324 5.2:-4733735 MS.gene09964:CDS
AGATGTGGAAGAAGTTAAAA+TGG 0.350382 5.2:-4733779 MS.gene09964:CDS
TTGCTTGATCCGGTATTTGC+GGG 0.367014 5.2:+4735931 None:intergenic
AAGAAGTTAAAATGGTAATA+AGG 0.380191 5.2:-4733771 MS.gene09964:CDS
TTCTTGAGCACACTCTCAAT+AGG 0.380892 5.2:-4733256 MS.gene09964:CDS
AGATGCCATTGAGTGTGTTT+TGG 0.390364 5.2:-4733393 MS.gene09964:CDS
TGCTGAGGCGGGCATAGAAT+TGG 0.392359 5.2:-4733044 MS.gene09964:CDS
CCCTTGTAATCAGATGCATC+TGG 0.396538 5.2:+4737069 None:intergenic
CAAGGTAGAGGTTGGGGTTA+CGG 0.404173 5.2:-4736004 MS.gene09964:CDS
AACTTCTTCCACATCTGTTA+AGG 0.406906 5.2:+4733786 None:intergenic
TCTTGAGCACACTCTCAATA+GGG 0.411173 5.2:-4733255 MS.gene09964:CDS
TCCGCGGCCGCCATGATATT+AGG 0.415550 5.2:-4737012 MS.gene09964:CDS
TAATAAGGATGTTACCCATA+TGG 0.419503 5.2:-4733756 MS.gene09964:CDS
CTCAGTAGTGTCCATGGTTG+CGG 0.432988 5.2:-4733485 MS.gene09964:CDS
CCCAGATGCATCTGATTACA+AGG 0.434717 5.2:-4737070 MS.gene09964:CDS
CAATCACAATCAAGGAGAAA+TGG 0.435261 5.2:-4733819 MS.gene09964:CDS
TAATTGTCCCATATACATAA+AGG 0.439112 5.2:+4733333 None:intergenic
GAGATTATCTTACAATTGCT+TGG 0.439655 5.2:+4736603 None:intergenic
TTGACCGGTACTATGCATTT+GGG 0.441330 5.2:-4736931 MS.gene09964:CDS
TCAATGACGGTCTTCTTAAT+CGG 0.441765 5.2:-4733625 MS.gene09964:CDS
TGCCACATAGCAAACAGTTC+CGG 0.441974 5.2:-4735763 MS.gene09964:intron
TACATCACGGCCCTCGGCAC+CGG 0.448076 5.2:-4736187 MS.gene09964:CDS
GCCTCTACATTCCATGCATA+GGG 0.450174 5.2:-4733010 None:intergenic
TCCTAATATCATGGCGGCCG+CGG 0.451996 5.2:+4737011 None:intergenic
GGTCGTAGAAAGGAACAGTT+AGG 0.460679 5.2:+4733593 None:intergenic
TTTCCCTTGTGTTGTAGGGA+GGG 0.463914 5.2:+4737098 None:intergenic
AGCAGACAGCAAGCAACTAT+TGG 0.464045 5.2:-4736227 MS.gene09964:CDS
AGATAACCAAGGTAGAGGTT+GGG 0.464346 5.2:-4736011 MS.gene09964:CDS
AATTTGGTCACATACTTGAC+CGG 0.465748 5.2:-4736946 MS.gene09964:CDS
GGAATGAAAACTATGAGTAC+AGG 0.465946 5.2:-4733283 MS.gene09964:CDS
CGGTCGTGTTTGTGGCTGCT+TGG 0.467550 5.2:-4735880 MS.gene09964:CDS
TCAGATTGCGGTCGTGTTTG+TGG 0.468178 5.2:-4735888 MS.gene09964:CDS
CTCAATGGCATCTTTGCCGT+TGG 0.474314 5.2:+4733403 None:intergenic
AAGACCGTCATTGATGCTGC+TGG 0.476879 5.2:+4733634 None:intergenic
ACAAGGGCCGGCCGGCCGAC+AGG 0.476979 5.2:-4737053 MS.gene09964:CDS
TGTCCGGTACCCGCAAATAC+CGG 0.478280 5.2:-4735940 MS.gene09964:CDS
CGCGGACCAACCACCGGTTG+TGG 0.478323 5.2:+4737029 None:intergenic
CACTTCTCCTCCTAATATCA+TGG 0.480052 5.2:+4737002 None:intergenic
GGTCTAAAATCTAGTGTCTC+TGG 0.480893 5.2:-4736163 MS.gene09964:CDS
ACCCAATAGACAGAGCATAA+AGG 0.482538 5.2:+4736864 None:intergenic
TACCGGATCAAGCAACTTGT+TGG 0.482750 5.2:-4735923 MS.gene09964:CDS
TTCTGATGACCAAGAAAAGA+AGG 0.483279 5.2:-4736116 MS.gene09964:CDS
TTGAAATTCGCACGATCACA+TGG 0.486954 5.2:-4733439 MS.gene09964:CDS
CCTTTACAACGCATTGGTGT+TGG 0.489948 5.2:-4733517 MS.gene09964:CDS
CGAATGAAGCGGTCGTAGAA+AGG 0.491283 5.2:+4733583 None:intergenic
AATAAGGATGTTACCCATAT+GGG 0.493344 5.2:-4733755 MS.gene09964:CDS
TGCTTGGACAGCTGCAAAGA+TGG 0.495214 5.2:+4736619 None:intergenic
GGAGAGGCCTTTATGTATAT+GGG 0.496953 5.2:-4733340 MS.gene09964:CDS
AGTCCTCTCAGTAGTGTCCA+TGG 0.500956 5.2:-4733491 MS.gene09964:CDS
TATTTGTGCGGTCGCAATTG+TGG 0.501020 5.2:-4735981 MS.gene09964:CDS
CAAGTATGTGACCAAATTAA+CGG 0.502223 5.2:+4736951 None:intergenic
TAGGAGGAGAAGTGATGGAG+AGG 0.502676 5.2:-4736993 MS.gene09964:CDS
AAGATAACCAAGGTAGAGGT+TGG 0.503461 5.2:-4736012 MS.gene09964:CDS
TTCACTCCTTTACAACGCAT+TGG 0.504068 5.2:-4733523 MS.gene09964:CDS
TGTCCAAAACATTATGGTTG+TGG 0.504094 5.2:+4733732 None:intergenic
TTTATGCTCTGTCTATTGGG+TGG 0.509907 5.2:-4736862 MS.gene09964:CDS
TACCAACAAGTTGCTTGATC+CGG 0.510732 5.2:+4735921 None:intergenic
TACCGGAACTGTTTGCTATG+TGG 0.513274 5.2:+4735761 None:intergenic
CCAACACCAATGCGTTGTAA+AGG 0.515233 5.2:+4733517 None:intergenic
ACCAACCAAAACACACTCAA+TGG 0.517641 5.2:+4733388 None:intergenic
GTTGCTTGATCCGGTATTTG+CGG 0.518244 5.2:+4735930 None:intergenic
TCGTGTTTGTGGCTGCTTGG+AGG 0.518539 5.2:-4735877 MS.gene09964:CDS
TTCTTCATTGCTCTATGAAG+AGG 0.518830 5.2:-4735828 MS.gene09964:CDS
CCGGTTGTGGACCTGTCGGC+CGG 0.519819 5.2:+4737042 None:intergenic
TTTCTTTGTTGGGTCTGGAG+AGG 0.523163 5.2:-4733356 MS.gene09964:CDS
TTGTGGACCTGTCGGCCGGC+CGG 0.524891 5.2:+4737046 None:intergenic
CCGGCCGACAGGTCCACAAC+CGG 0.525288 5.2:-4737042 MS.gene09964:CDS
GCACTTTACATCACGGCCCT+CGG 0.525416 5.2:-4736193 MS.gene09964:CDS
GACAAGAGACTTGCTGAGGC+GGG 0.533846 5.2:-4733055 MS.gene09964:CDS
ATTGCGGATAATCTTGATCA+AGG 0.535890 5.2:-4733169 MS.gene09964:CDS
GATAACCAAGGTAGAGGTTG+GGG 0.537914 5.2:-4736010 MS.gene09964:CDS
ATCTGATTACAAGGGCCGGC+CGG 0.538203 5.2:-4737061 MS.gene09964:CDS
TGGTCTTAGGTGTTTCACAT+AGG 0.541798 5.2:+4735798 None:intergenic
CCTTGTAATCAGATGCATCT+GGG 0.541992 5.2:+4737070 None:intergenic
GGCGGCCGCGGACCAACCAC+CGG 0.543833 5.2:+4737023 None:intergenic
ATCACGGCCCTCGGCACCGG+TGG 0.545009 5.2:-4736184 MS.gene09964:CDS
ATTATGGTTGTGGCCCATAT+GGG 0.546937 5.2:+4733742 None:intergenic
CGTAACCCCAACCTCTACCT+TGG 0.549093 5.2:+4736005 None:intergenic
TGGCAGTGCAATCACAATCA+AGG 0.551937 5.2:-4733827 MS.gene09964:CDS
GATCCGGTATTTGCGGGTAC+CGG 0.554792 5.2:+4735937 None:intergenic
TTAGACAAAGCGGCAATCAA+AGG 0.554882 5.2:-4733859 MS.gene09964:CDS
GATATTAGGAGGAGAAGTGA+TGG 0.558978 5.2:-4736998 MS.gene09964:CDS
TATGAGTGCTGCCGCAACCA+TGG 0.562291 5.2:+4733474 None:intergenic
CACCTAAGACCAAGAAGCAA+AGG 0.564356 5.2:-4735787 MS.gene09964:CDS
TGCCTCTACATTCCATGCAT+AGG 0.564381 5.2:-4733011 None:intergenic
ACAACCATGGATTGTCACAT+TGG 0.565357 5.2:-4733670 MS.gene09964:CDS
AAGCATAGGGTCTTTGGCAG+CGG 0.567922 5.2:-4736056 MS.gene09964:CDS
ATGCATCTGATTACAAGGGC+CGG 0.569787 5.2:-4737065 MS.gene09964:CDS
TGTTCCAATGTGACAATCCA+TGG 0.571949 5.2:+4733666 None:intergenic
ACGACCGCAATCTGAGTCAA+AGG 0.573004 5.2:+4735896 None:intergenic
TCCAAATAAACCATGGATTG+CGG 0.574971 5.2:-4733185 MS.gene09964:CDS
GGACAAGAGACTTGCTGAGG+CGG 0.576506 5.2:-4733056 MS.gene09964:CDS
TCAAGATTATCCGCAATCCA+TGG 0.577407 5.2:+4733175 None:intergenic
CACAACCGGTGGTTGGTCCG+CGG 0.578072 5.2:-4737028 MS.gene09964:CDS
TAAGAAATTAGTAACAACAT+TGG 0.578419 5.2:+4736894 None:intergenic
GCAATCAAAGGCATAGAAAG+TGG 0.579246 5.2:-4733847 MS.gene09964:CDS
TATCTCTACCTTAACAGATG+TGG 0.585721 5.2:-4733794 MS.gene09964:CDS
ATTAGTAACAACATTGGCAG+AGG 0.586147 5.2:+4736900 None:intergenic
TTGCGACTGGTCGAATGAAG+CGG 0.586629 5.2:+4733572 None:intergenic
AGCACCCTCCCTACAACACA+AGG 0.588695 5.2:-4737102 MS.gene09964:CDS
TAGTCCTTTGACTCAGATTG+CGG 0.589065 5.2:-4735900 MS.gene09964:CDS
AGACCGTCATTGATGCTGCT+GGG 0.589637 5.2:+4733635 None:intergenic
TGCTAAGTGGTATGTGTACA+AGG 0.589791 5.2:-4733077 MS.gene09964:CDS
ACAGGTCCACAACCGGTGGT+TGG 0.591605 5.2:-4737035 MS.gene09964:CDS
AGAATGTTGTCATTTGAGCA+TGG 0.600950 5.2:+4733707 None:intergenic
ATGGAGAGGTTGACAACACT+CGG 0.600987 5.2:-4736979 MS.gene09964:CDS
GACAGCTGCAAAGATGGTAA+TGG 0.602146 5.2:+4736625 None:intergenic
ATTGCCCAAATGCATAGTAC+CGG 0.603355 5.2:+4736927 None:intergenic
ATACAAGATAACCAAGGTAG+AGG 0.606582 5.2:-4736016 MS.gene09964:CDS
TATATTTGGCTTGTGCTAAG+TGG 0.609309 5.2:-4733090 MS.gene09964:CDS
GTATTTAGCACTTTACATCA+CGG 0.617039 5.2:-4736200 MS.gene09964:CDS
TTGCGGATAATCTTGATCAA+GGG 0.620665 5.2:-4733168 MS.gene09964:CDS
GACTCTAGTGAACAATGTGA+CGG 0.622141 5.2:-4733209 MS.gene09964:CDS
ACTCTAGTGAACAATGTGAC+GGG 0.623386 5.2:-4733208 MS.gene09964:CDS
TCTGATGACCAAGAAAAGAA+GGG 0.624905 5.2:-4736115 MS.gene09964:CDS
CGGATAATCTTGATCAAGGG+AGG 0.625811 5.2:-4733165 MS.gene09964:CDS
ATAGAGCAATGAAGAATCAG+AGG 0.625823 5.2:+4735835 None:intergenic
ACCACCGGTTGTGGACCTGT+CGG 0.626051 5.2:+4737038 None:intergenic
CCTCTACATTCCATGCATAG+GGG 0.630402 5.2:-4733009 None:intergenic
CAGCACTCATAGAAATGAAG+CGG 0.633945 5.2:-4733462 MS.gene09964:CDS
CCCCTATGCATGGAATGTAG+AGG 0.633977 5.2:+4733009 None:intergenic
GCCGACAGGTCCACAACCGG+TGG 0.637663 5.2:-4737039 MS.gene09964:CDS
GAATGAAAACTATGAGTACA+GGG 0.638544 5.2:-4733282 MS.gene09964:CDS
TAGAGCAATGAAGAATCAGA+GGG 0.646481 5.2:+4735836 None:intergenic
AATCCCAGCAGCATCAATGA+CGG 0.648376 5.2:-4733638 MS.gene09964:CDS
TGACGGGTCCAAATAAACCA+TGG 0.653922 5.2:-4733192 MS.gene09964:CDS
GCGGCCGCCATGATATTAGG+AGG 0.655145 5.2:-4737009 MS.gene09964:CDS
TATGCTAAGTGCTATAAATG+TGG 0.657537 5.2:-4733116 MS.gene09964:CDS
AAACAGTTTCTTAGACAAAG+CGG 0.657671 5.2:-4733869 MS.gene09964:intron
AGTATCACAAGCAACAACCA+TGG 0.663164 5.2:-4733683 MS.gene09964:CDS
TTGGGGTTACGGTATTTGTG+CGG 0.666939 5.2:-4735993 MS.gene09964:CDS
CAATAGACAGAGCATAAAGG+AGG 0.685001 5.2:+4736867 None:intergenic
AAATTACTAAACAACTCACA+CGG 0.686574 5.2:-4733547 MS.gene09964:CDS
TTCTCCTCCTAATATCATGG+CGG 0.687568 5.2:+4737005 None:intergenic
GGGTACCGGACAAGAAAACA+AGG 0.694489 5.2:+4735951 None:intergenic
CCAGATGCATCTGATTACAA+GGG 0.704068 5.2:-4737069 MS.gene09964:CDS
CAAGGACAAGAGACTTGCTG+AGG 0.709240 5.2:-4733059 MS.gene09964:CDS
CAACCATGGACACTACTGAG+AGG 0.733442 5.2:+4733488 None:intergenic
GCACCCTCCCTACAACACAA+GGG 0.747611 5.2:-4737101 MS.gene09964:CDS
GTGTACATACAAGATAACCA+AGG 0.754045 5.2:-4736022 MS.gene09964:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTCATTTATTTATTTAT+TGG - chr5.2:4734647-4734666 MS.gene09964:intron 10.0%
!! TTTATATAATAGTATAGTAT+TGG - chr5.2:4735382-4735401 MS.gene09964:intron 10.0%
!!! AATTGCAAATTTTTTTAATA+AGG + chr5.2:4735458-4735477 None:intergenic 10.0%
!!! ATTAAAAAAATTTGCAATTT+TGG - chr5.2:4735459-4735478 MS.gene09964:intron 10.0%
!!! TTTTGCAATTTTTTTTAATA+GGG - chr5.2:4735633-4735652 MS.gene09964:intron 10.0%
!! AAAAAATTCCTTTCTTATTA+TGG - chr5.2:4733329-4733348 MS.gene09964:CDS 15.0%
!! AATCTACTTAATATACTTTA+AGG + chr5.2:4735938-4735957 None:intergenic 15.0%
!! AATTAATTCATTAATCTTCA+AGG + chr5.2:4736212-4736231 None:intergenic 15.0%
!! ATAAAGACATTTATCATTAT+TGG - chr5.2:4735169-4735188 MS.gene09964:intron 15.0%
!! TAAAGACATTTATCATTATT+GGG - chr5.2:4735170-4735189 MS.gene09964:intron 15.0%
!!! CTTTTGCAATTTTTTTTAAT+AGG - chr5.2:4735632-4735651 MS.gene09964:intron 15.0%
!!! TAAACCTTTATAATTTGTTT+GGG + chr5.2:4735007-4735026 None:intergenic 15.0%
!!! TTTATTAATTTGTAATTCAG+TGG + chr5.2:4736063-4736082 None:intergenic 15.0%
!!! TTTGCAATTTTTTTTAATAG+GGG - chr5.2:4735634-4735653 MS.gene09964:intron 15.0%
!!! TTTTATTTGAAAACAAAAGT+TGG - chr5.2:4734824-4734843 MS.gene09964:intron 15.0%
!! AAAACCAATCATAATTAATG+TGG + chr5.2:4733402-4733421 None:intergenic 20.0%
!! AAAATAGTACTAGAAAACAA+TGG + chr5.2:4733560-4733579 None:intergenic 20.0%
!! AAGAAGTTAAAATGGTAATA+AGG - chr5.2:4736346-4736365 MS.gene09964:intron 20.0%
!! AAGTTTCAAAAATCTAACTA+AGG - chr5.2:4735831-4735850 MS.gene09964:CDS 20.0%
!! AATATCAAAGAACTAAACAA+CGG + chr5.2:4733765-4733784 None:intergenic 20.0%
!! AATGTTGTTACTAATTTCTT+AGG - chr5.2:4733225-4733244 MS.gene09964:CDS 20.0%
!! AATTCCCAAACAAATTATAA+AGG - chr5.2:4735000-4735019 MS.gene09964:intron 20.0%
!! ACGAATGTATGTTTATATTA+GGG - chr5.2:4733786-4733805 MS.gene09964:CDS 20.0%
!! AGAATGAATAGAAAATTTAC+CGG + chr5.2:4734376-4734395 None:intergenic 20.0%
!! ATGTAGAAAGAACAAATTAT+TGG - chr5.2:4735202-4735221 MS.gene09964:intron 20.0%
!! ATTAAGTAGATTGATTGAAA+GGG - chr5.2:4735946-4735965 MS.gene09964:CDS 20.0%
!! CATAAACTAAAAACAAAGAA+AGG + chr5.2:4735872-4735891 None:intergenic 20.0%
!! TAAGAAATTAGTAACAACAT+TGG + chr5.2:4733226-4733245 None:intergenic 20.0%
!! TATAAATGTGGTGATATATT+TGG - chr5.2:4737013-4737032 MS.gene09964:CDS 20.0%
!! TATTAAGTAGATTGATTGAA+AGG - chr5.2:4735945-4735964 MS.gene09964:CDS 20.0%
!! TGTAGAAAGAACAAATTATT+GGG - chr5.2:4735203-4735222 MS.gene09964:intron 20.0%
!!! ACAACATTTTAAAACTTAGA+GGG + chr5.2:4735425-4735444 None:intergenic 20.0%
!!! CTAAACCTTTATAATTTGTT+TGG + chr5.2:4735008-4735027 None:intergenic 20.0%
!!! GTTTTAAAATGTTGTGATTT+TGG - chr5.2:4735430-4735449 MS.gene09964:intron 20.0%
!!! TTAGTTTTCCATAATAAGAA+AGG + chr5.2:4733340-4733359 None:intergenic 20.0%
!!! TTATAATTTGTTTGGGAATT+GGG + chr5.2:4735000-4735019 None:intergenic 20.0%
!!! TTGCAATTTTTTTTAATAGG+GGG - chr5.2:4735635-4735654 MS.gene09964:intron 20.0%
!!! TTTATAATTTGTTTGGGAAT+TGG + chr5.2:4735001-4735020 None:intergenic 20.0%
!!! TTTTTGAGGATTTAATTCAA+AGG + chr5.2:4733732-4733751 None:intergenic 20.0%
! AAATTACTAAACAACTCACA+CGG - chr5.2:4736570-4736589 MS.gene09964:intron 25.0%
! AACATATTTCTCTAAACATG+GGG - chr5.2:4735604-4735623 MS.gene09964:intron 25.0%
! AGAACATATTTCTCTAAACA+TGG - chr5.2:4735602-4735621 MS.gene09964:intron 25.0%
! ATAAACCACACATTATTAGT+TGG + chr5.2:4735340-4735359 None:intergenic 25.0%
! ATATCTGTCAAACAAAGAAT+GGG + chr5.2:4733468-4733487 None:intergenic 25.0%
! ATTAAGCTACTTAAACTAAG+AGG + chr5.2:4734517-4734536 None:intergenic 25.0%
! GAACATATTTCTCTAAACAT+GGG - chr5.2:4735603-4735622 MS.gene09964:intron 25.0%
! GACGAATGTATGTTTATATT+AGG - chr5.2:4733785-4733804 MS.gene09964:CDS 25.0%
! GTAAAAGCAATAATTTCGAA+AGG + chr5.2:4735786-4735805 None:intergenic 25.0%
! TAATTGTCCCATATACATAA+AGG + chr5.2:4736787-4736806 None:intergenic 25.0%
! TCTTTATTGTTAGTTGCATA+CGG + chr5.2:4735156-4735175 None:intergenic 25.0%
! TGACTCAAAATTGAATAGTT+TGG - chr5.2:4734779-4734798 MS.gene09964:intron 25.0%
! TGATCCACATTAATTATGAT+TGG - chr5.2:4733395-4733414 MS.gene09964:CDS 25.0%
! TTCTCTCAAAAAATAATGTG+TGG - chr5.2:4735359-4735378 MS.gene09964:intron 25.0%
! TTTACAAAAAGTTGCGATTA+TGG + chr5.2:4735537-4735556 None:intergenic 25.0%
!! ACGGTATGATTAAATTTTTG+AGG + chr5.2:4733746-4733765 None:intergenic 25.0%
!! GTTTCAAAATGTTGCAATTT+TGG + chr5.2:4735661-4735680 None:intergenic 25.0%
!! TGACATAGTTGATATATTTG+TGG - chr5.2:4734752-4734771 MS.gene09964:intron 25.0%
!!! ATTGCAACATTTTGAAACTT+AGG - chr5.2:4735663-4735682 MS.gene09964:intron 25.0%
!!! CACAACATTTTAAAACTTAG+AGG + chr5.2:4735426-4735445 None:intergenic 25.0%
!!! CTATGATTTTTATTGGCTAT+TGG - chr5.2:4736977-4736996 MS.gene09964:CDS 25.0%
!!! GTATGATTAAATTTTTCAGC+TGG - chr5.2:4734024-4734043 MS.gene09964:intron 25.0%
!!! TATAATTTGTTTGGGAATTG+GGG + chr5.2:4734999-4735018 None:intergenic 25.0%
!!! TCTATTTTTTCGTAAGCATA+GGG - chr5.2:4734048-4734067 MS.gene09964:intron 25.0%
!!! TTCTATTTTTTCGTAAGCAT+AGG - chr5.2:4734047-4734066 MS.gene09964:intron 25.0%
!!! TTGCAACATTTTGAAACTTA+GGG - chr5.2:4735664-4735683 MS.gene09964:intron 25.0%
!!! TTTAGTAATTTTTTTGCGAC+TGG + chr5.2:4736561-4736580 None:intergenic 25.0%
!!! TTTTTAAGAGAATGTCCTAA+AGG - chr5.2:4736813-4736832 MS.gene09964:intron 25.0%
AAACAGTTTCTTAGACAAAG+CGG - chr5.2:4736248-4736267 MS.gene09964:CDS 30.0%
AAAGAAAAGAGAGGAGAAAA+TGG + chr5.2:4734973-4734992 None:intergenic 30.0%
AAAGTTTCTCTTCCAATGAA+TGG - chr5.2:4734539-4734558 MS.gene09964:intron 30.0%
AAATGACAACTGGGTTATTA+AGG - chr5.2:4735252-4735271 MS.gene09964:intron 30.0%
AATAAGGATGTTACCCATAT+GGG - chr5.2:4736362-4736381 MS.gene09964:intron 30.0%
ACATATTTCTCTAAACATGG+GGG - chr5.2:4735605-4735624 MS.gene09964:intron 30.0%
ACTCAAATTGTTCCATTCAT+TGG + chr5.2:4734554-4734573 None:intergenic 30.0%
AGAAACCAACTAATAATGTG+TGG - chr5.2:4735332-4735351 MS.gene09964:intron 30.0%
AGATGTGGAAGAAGTTAAAA+TGG - chr5.2:4736338-4736357 MS.gene09964:intron 30.0%
ATATACTGTATATGTCAAGG+AGG - chr5.2:4735064-4735083 MS.gene09964:intron 30.0%
CAAGTATGTGACCAAATTAA+CGG + chr5.2:4733169-4733188 None:intergenic 30.0%
CATATTTCCCTTATGTTAGA+GGG - chr5.2:4735574-4735593 MS.gene09964:intron 30.0%
CGATACGCAAAAAATACTAT+AGG + chr5.2:4735708-4735727 None:intergenic 30.0%
GAATGAAAACTATGAGTACA+GGG - chr5.2:4736835-4736854 MS.gene09964:CDS 30.0%
GAGATTATCTTACAATTGCT+TGG + chr5.2:4733517-4733536 None:intergenic 30.0%
GATATCTGTCAAACAAAGAA+TGG + chr5.2:4733469-4733488 None:intergenic 30.0%
GATATCTTGCAAATCTCAAA+AGG + chr5.2:4735749-4735768 None:intergenic 30.0%
GGAATATACTGTATATGTCA+AGG - chr5.2:4735061-4735080 MS.gene09964:intron 30.0%
GTATAGACAATCTTCTCTAA+TGG + chr5.2:4734723-4734742 None:intergenic 30.0%
GTATTTAGCACTTTACATCA+CGG - chr5.2:4733917-4733936 MS.gene09964:intron 30.0%
TAATAAGGATGTTACCCATA+TGG - chr5.2:4736361-4736380 MS.gene09964:intron 30.0%
TATACTGTATATGTCAAGGA+GGG - chr5.2:4735065-4735084 MS.gene09964:intron 30.0%
TCTTCAAGGTAATAACAAAG+AGG + chr5.2:4736198-4736217 None:intergenic 30.0%
TTGAAAGGGTCAATAAACTT+CGG - chr5.2:4735960-4735979 MS.gene09964:CDS 30.0%
TTGCTATGTTTATGTCTTGT+TGG - chr5.2:4734487-4734506 MS.gene09964:intron 30.0%
TTGTTCTTTCTACATCAAGT+GGG + chr5.2:4735197-4735216 None:intergenic 30.0%
TTTGTTCTTTCTACATCAAG+TGG + chr5.2:4735198-4735217 None:intergenic 30.0%
! ATGGATTGTCCAAAACATTA+TGG + chr5.2:4736394-4736413 None:intergenic 30.0%
! CAACTTTTTGTAAAGATGTG+AGG - chr5.2:4735543-4735562 MS.gene09964:intron 30.0%
! CATAAGGGAAATATGCTTTT+TGG + chr5.2:4735569-4735588 None:intergenic 30.0%
! CTCATAGTTTTCATTCCTTT+AGG + chr5.2:4736831-4736850 None:intergenic 30.0%
! TAATCATACCCTTCTTTTCT+TGG + chr5.2:4734013-4734032 None:intergenic 30.0%
! TGCCACAATTTTTCTTTGTT+GGG - chr5.2:4736751-4736770 MS.gene09964:intron 30.0%
! TTAGAGTCTTCTTTGCATTT+TGG + chr5.2:4733858-4733877 None:intergenic 30.0%
! TTTCTTGCTGATACTTTTCT+AGG - chr5.2:4733279-4733298 MS.gene09964:CDS 30.0%
!!! AGGTAATTTTGATTGATGAG+AGG + chr5.2:4735918-4735937 None:intergenic 30.0%
AAAAGAGAGGAGAAAATGGA+AGG + chr5.2:4734969-4734988 None:intergenic 35.0%
AAAGAGAGGAGAAAATGGAA+GGG + chr5.2:4734968-4734987 None:intergenic 35.0%
AACTTCTTCCACATCTGTTA+AGG + chr5.2:4736334-4736353 None:intergenic 35.0%
AATTTGGTCACATACTTGAC+CGG - chr5.2:4733171-4733190 MS.gene09964:CDS 35.0%
ATACAAGATAACCAAGGTAG+AGG - chr5.2:4734101-4734120 MS.gene09964:intron 35.0%
ATACTGTATATGTCAAGGAG+GGG - chr5.2:4735066-4735085 MS.gene09964:intron 35.0%
ATAGAGCAATGAAGAATCAG+AGG + chr5.2:4734285-4734304 None:intergenic 35.0%
ATATGCATATTGCTCCTCTT+TGG - chr5.2:4736149-4736168 MS.gene09964:CDS 35.0%
ATGGCCCACTATTAAATATG+TGG + chr5.2:4735231-4735250 None:intergenic 35.0%
ATTAACTCTCAGAAATCACG+AGG + chr5.2:4733429-4733448 None:intergenic 35.0%
ATTAGTAACAACATTGGCAG+AGG + chr5.2:4733220-4733239 None:intergenic 35.0%
ATTGCGGATAATCTTGATCA+AGG - chr5.2:4736948-4736967 MS.gene09964:CDS 35.0%
CAATCACAATCAAGGAGAAA+TGG - chr5.2:4736298-4736317 MS.gene09964:CDS 35.0%
CATATTAAGCAACACCAAAG+AGG + chr5.2:4736166-4736185 None:intergenic 35.0%
CATATTTCTCTAAACATGGG+GGG - chr5.2:4735606-4735625 MS.gene09964:intron 35.0%
GACCCAACAAAGAAAAATTG+TGG + chr5.2:4736756-4736775 None:intergenic 35.0%
GATCATTTGCTCCTTAATCA+TGG - chr5.2:4735274-4735293 MS.gene09964:intron 35.0%
GCATATTTCCCTTATGTTAG+AGG - chr5.2:4735573-4735592 MS.gene09964:intron 35.0%
GGAATGAAAACTATGAGTAC+AGG - chr5.2:4736834-4736853 MS.gene09964:intron 35.0%
GTGTACATACAAGATAACCA+AGG - chr5.2:4734095-4734114 MS.gene09964:intron 35.0%
TAGAGCAATGAAGAATCAGA+GGG + chr5.2:4734284-4734303 None:intergenic 35.0%
TATCTCTACCTTAACAGATG+TGG - chr5.2:4736323-4736342 MS.gene09964:intron 35.0%
TCAATGACGGTCTTCTTAAT+CGG - chr5.2:4736492-4736511 MS.gene09964:intron 35.0%
TCCTTTATGCTCTGTCTATT+GGG - chr5.2:4733252-4733271 MS.gene09964:CDS 35.0%
TCTGATGACCAAGAAAAGAA+GGG - chr5.2:4734002-4734021 MS.gene09964:intron 35.0%
TGGTTTCCAATCATGAAGAT+CGG + chr5.2:4734703-4734722 None:intergenic 35.0%
TGTCCAAAACATTATGGTTG+TGG + chr5.2:4736388-4736407 None:intergenic 35.0%
TGTTCTTTCTACATCAAGTG+GGG + chr5.2:4735196-4735215 None:intergenic 35.0%
TTCTGATGACCAAGAAAAGA+AGG - chr5.2:4734001-4734020 MS.gene09964:intron 35.0%
TTCTTCATTGCTCTATGAAG+AGG - chr5.2:4734289-4734308 MS.gene09964:intron 35.0%
TTGCGGATAATCTTGATCAA+GGG - chr5.2:4736949-4736968 MS.gene09964:CDS 35.0%
! AGAATGTTGTCATTTGAGCA+TGG + chr5.2:4736413-4736432 None:intergenic 35.0%
! ATAACCCAGTTGTCATTTCA+TGG + chr5.2:4735250-4735269 None:intergenic 35.0%
! CAATTTTTCTTTGTTGGGTC+TGG - chr5.2:4736756-4736775 MS.gene09964:intron 35.0%
! CTTTTGACCCTCTAACATAA+GGG + chr5.2:4735584-4735603 None:intergenic 35.0%
! GGAGGCTCTATGATTTTTAT+TGG - chr5.2:4736970-4736989 MS.gene09964:CDS 35.0%
! GGTGCCACATATTTAATAGT+GGG - chr5.2:4735224-4735243 MS.gene09964:intron 35.0%
! GTCAAAAAAGAAGTATGCCT+TGG - chr5.2:4735891-4735910 MS.gene09964:CDS 35.0%
! GTGCCACAATTTTTCTTTGT+TGG - chr5.2:4736750-4736769 MS.gene09964:intron 35.0%
! TCCAAATAAACCATGGATTG+CGG - chr5.2:4736932-4736951 MS.gene09964:CDS 35.0%
! TCTTTTGACCCTCTAACATA+AGG + chr5.2:4735585-4735604 None:intergenic 35.0%
!! TATATTTGGCTTGTGCTAAG+TGG - chr5.2:4737027-4737046 MS.gene09964:CDS 35.0%
!! TTGCTGATACTTTTCTAGGA+AGG - chr5.2:4733283-4733302 MS.gene09964:CDS 35.0%
!!! GTATTTTTTGCGTATCGCTT+TGG - chr5.2:4735711-4735730 MS.gene09964:intron 35.0%
!!! TCAACAATTTTGGGACGAAA+GGG + chr5.2:4735486-4735505 None:intergenic 35.0%
!!! TGGTTTTGTAAACGATCCAA+CGG - chr5.2:4736698-4736717 MS.gene09964:intron 35.0%
AAGATAACCAAGGTAGAGGT+TGG - chr5.2:4734105-4734124 MS.gene09964:intron 40.0%
AAGGTAAGAGAAGGAAAAGG+TGG + chr5.2:4734940-4734959 None:intergenic 40.0%
ACCAACCAAAACACACTCAA+TGG + chr5.2:4736732-4736751 None:intergenic 40.0%
ACCCAATAGACAGAGCATAA+AGG + chr5.2:4733256-4733275 None:intergenic 40.0%
ACTCTAGTGAACAATGTGAC+GGG - chr5.2:4736909-4736928 MS.gene09964:CDS 40.0%
AGATAACCAAGGTAGAGGTT+GGG - chr5.2:4734106-4734125 MS.gene09964:intron 40.0%
AGTATCACAAGCAACAACCA+TGG - chr5.2:4736434-4736453 MS.gene09964:intron 40.0%
ATTATGGTTGTGGCCCATAT+GGG + chr5.2:4736378-4736397 None:intergenic 40.0%
ATTGCCCAAATGCATAGTAC+CGG + chr5.2:4733193-4733212 None:intergenic 40.0%
CAATAGACAGAGCATAAAGG+AGG + chr5.2:4733253-4733272 None:intergenic 40.0%
CACTTCTCCTCCTAATATCA+TGG + chr5.2:4733118-4733137 None:intergenic 40.0%
CAGCACTCATAGAAATGAAG+CGG - chr5.2:4736655-4736674 MS.gene09964:intron 40.0%
CCAGATGCATCTGATTACAA+GGG - chr5.2:4733048-4733067 MS.gene09964:CDS 40.0%
CCTTGTAATCAGATGCATCT+GGG + chr5.2:4733050-4733069 None:intergenic 40.0%
CTCCTTTATGCTCTGTCTAT+TGG - chr5.2:4733251-4733270 MS.gene09964:CDS 40.0%
CTTGCAAATCTCAAAAGGCA+GGG + chr5.2:4735744-4735763 None:intergenic 40.0%
GACTCTAGTGAACAATGTGA+CGG - chr5.2:4736908-4736927 MS.gene09964:CDS 40.0%
GATATTAGGAGGAGAAGTGA+TGG - chr5.2:4733119-4733138 MS.gene09964:CDS 40.0%
GGAGAGGCCTTTATGTATAT+GGG - chr5.2:4736777-4736796 MS.gene09964:intron 40.0%
GGTTTCCAATCATGAAGATC+GGG + chr5.2:4734702-4734721 None:intergenic 40.0%
GTCAACACAAAGTGATAGAG+TGG - chr5.2:4735040-4735059 MS.gene09964:intron 40.0%
TACCAACAAGTTGCTTGATC+CGG + chr5.2:4734199-4734218 None:intergenic 40.0%
TAGTCCTTTGACTCAGATTG+CGG - chr5.2:4734217-4734236 MS.gene09964:intron 40.0%
TCAAGATTATCCGCAATCCA+TGG + chr5.2:4736945-4736964 None:intergenic 40.0%
TCAATCCCGATCTTCATGAT+TGG - chr5.2:4734694-4734713 MS.gene09964:intron 40.0%
TCCGCAATCCATGGTTTATT+TGG + chr5.2:4736936-4736955 None:intergenic 40.0%
TCGAAAGGAGATAGACTAGA+TGG + chr5.2:4735771-4735790 None:intergenic 40.0%
TCTTGAGCACACTCTCAATA+GGG - chr5.2:4736862-4736881 MS.gene09964:CDS 40.0%
TCTTGCAAATCTCAAAAGGC+AGG + chr5.2:4735745-4735764 None:intergenic 40.0%
TGCTAAGTGGTATGTGTACA+AGG - chr5.2:4737040-4737059 MS.gene09964:CDS 40.0%
TGGACTTGTCACCATGATTA+AGG + chr5.2:4735288-4735307 None:intergenic 40.0%
TGGAGAGGCCTTTATGTATA+TGG - chr5.2:4736776-4736795 MS.gene09964:intron 40.0%
TGTTCCAATGTGACAATCCA+TGG + chr5.2:4736454-4736473 None:intergenic 40.0%
TTAACTATTAAGCTCGTGCG+TGG + chr5.2:4735308-4735327 None:intergenic 40.0%
TTAGACAAAGCGGCAATCAA+AGG - chr5.2:4736258-4736277 MS.gene09964:CDS 40.0%
TTCACTCCTTTACAACGCAT+TGG - chr5.2:4736594-4736613 MS.gene09964:intron 40.0%
TTCTCCTCCTAATATCATGG+CGG + chr5.2:4733115-4733134 None:intergenic 40.0%
TTCTTGAGCACACTCTCAAT+AGG - chr5.2:4736861-4736880 MS.gene09964:CDS 40.0%
TTGAAATTCGCACGATCACA+TGG - chr5.2:4736678-4736697 MS.gene09964:intron 40.0%
TTGACCGGTACTATGCATTT+GGG - chr5.2:4733186-4733205 MS.gene09964:CDS 40.0%
TTGGGGAGTAAAGAAAAGAG+AGG + chr5.2:4734982-4735001 None:intergenic 40.0%
TTTATGCTCTGTCTATTGGG+TGG - chr5.2:4733255-4733274 MS.gene09964:CDS 40.0%
TTTCGTAAGCATAGGGTCTT+TGG - chr5.2:4734055-4734074 MS.gene09964:intron 40.0%
TTTGATTGATGAGAGGTCCA+AGG + chr5.2:4735911-4735930 None:intergenic 40.0%
! AAATCTAGTGTCTCTGGCTT+TGG - chr5.2:4733960-4733979 MS.gene09964:intron 40.0%
! ACAACCATGGATTGTCACAT+TGG - chr5.2:4736447-4736466 MS.gene09964:intron 40.0%
! ACAGTTTTCCCTTGTGTTGT+AGG + chr5.2:4733027-4733046 None:intergenic 40.0%
! AGATGCCATTGAGTGTGTTT+TGG - chr5.2:4736724-4736743 MS.gene09964:intron 40.0%
! ATCCTTTGCTTCTTGGTCTT+AGG + chr5.2:4734335-4734354 None:intergenic 40.0%
! CAGTTTTCCCTTGTGTTGTA+GGG + chr5.2:4733026-4733045 None:intergenic 40.0%
! GACACTAGATTTTAGACCAC+CGG + chr5.2:4733952-4733971 None:intergenic 40.0%
! GAGTCTTCTTTGCATTTTGG+TGG + chr5.2:4733855-4733874 None:intergenic 40.0%
! GCAATCAAAGGCATAGAAAG+TGG - chr5.2:4736270-4736289 MS.gene09964:CDS 40.0%
! GGCGTCTTCTCAACAATTTT+GGG + chr5.2:4735495-4735514 None:intergenic 40.0%
! GGGTGCCACATATTTAATAG+TGG - chr5.2:4735223-4735242 MS.gene09964:intron 40.0%
! GGTCTAAAATCTAGTGTCTC+TGG - chr5.2:4733954-4733973 MS.gene09964:intron 40.0%
! TGGCGTCTTCTCAACAATTT+TGG + chr5.2:4735496-4735515 None:intergenic 40.0%
! TGGTCTTAGGTGTTTCACAT+AGG + chr5.2:4734322-4734341 None:intergenic 40.0%
!! CTTTGCATTTTGGTGGATGT+AGG + chr5.2:4733848-4733867 None:intergenic 40.0%
!!! CAACAATTTTGGGACGAAAG+GGG + chr5.2:4735485-4735504 None:intergenic 40.0%
!!! CTCAACAATTTTGGGACGAA+AGG + chr5.2:4735487-4735506 None:intergenic 40.0%
!!! GCGATTATGGTCCCTTTTTT+GGG + chr5.2:4735524-4735543 None:intergenic 40.0%
!!! TGCGATTATGGTCCCTTTTT+TGG + chr5.2:4735525-4735544 None:intergenic 40.0%
AATCCCAGCAGCATCAATGA+CGG - chr5.2:4736479-4736498 MS.gene09964:intron 45.0%
AATGAAACTCCCACGCATCT+TGG + chr5.2:4735113-4735132 None:intergenic 45.0%
AGAAAATGGAAGGGATGGGA+AGG + chr5.2:4734959-4734978 None:intergenic 45.0%
AGAGGAGAAAATGGAAGGGA+TGG + chr5.2:4734964-4734983 None:intergenic 45.0%
AGCAGACAGCAAGCAACTAT+TGG - chr5.2:4733890-4733909 MS.gene09964:intron 45.0%
AGTTGCATACGGCTCTCAAT+TGG + chr5.2:4735145-4735164 None:intergenic 45.0%
ATGCATCTGATTACAAGGGC+CGG - chr5.2:4733052-4733071 MS.gene09964:CDS 45.0%
ATGGAGAGGTTGACAACACT+CGG - chr5.2:4733138-4733157 MS.gene09964:CDS 45.0%
ATGTGGCATCCTTTGCTTCT+TGG + chr5.2:4734342-4734361 None:intergenic 45.0%
CACCTAAGACCAAGAAGCAA+AGG - chr5.2:4734330-4734349 MS.gene09964:intron 45.0%
CATTATGGTTGTGGCCCATA+TGG + chr5.2:4736379-4736398 None:intergenic 45.0%
CCAACACCAATGCGTTGTAA+AGG + chr5.2:4736603-4736622 None:intergenic 45.0%
CCCAGATGCATCTGATTACA+AGG - chr5.2:4733047-4733066 MS.gene09964:CDS 45.0%
CCCTTGTAATCAGATGCATC+TGG + chr5.2:4733051-4733070 None:intergenic 45.0%
CGGATAATCTTGATCAAGGG+AGG - chr5.2:4736952-4736971 MS.gene09964:CDS 45.0%
CTTGACCGGTACTATGCATT+TGG - chr5.2:4733185-4733204 MS.gene09964:CDS 45.0%
GACAGCTGCAAAGATGGTAA+TGG + chr5.2:4733495-4733514 None:intergenic 45.0%
GAGGAGAAAATGGAAGGGAT+GGG + chr5.2:4734963-4734982 None:intergenic 45.0%
GATAACCAAGGTAGAGGTTG+GGG - chr5.2:4734107-4734126 MS.gene09964:intron 45.0%
GGCAGGATCAACATCGAATA+GGG + chr5.2:4735092-4735111 None:intergenic 45.0%
GGGAAGGTAAGAGAAGGAAA+AGG + chr5.2:4734943-4734962 None:intergenic 45.0%
GGTCGTAGAAAGGAACAGTT+AGG + chr5.2:4736527-4736546 None:intergenic 45.0%
GTTGCTTGATCCGGTATTTG+CGG + chr5.2:4734190-4734209 None:intergenic 45.0%
TACCGGATCAAGCAACTTGT+TGG - chr5.2:4734194-4734213 MS.gene09964:intron 45.0%
TATTTGTGCGGTCGCAATTG+TGG - chr5.2:4734136-4734155 MS.gene09964:intron 45.0%
TGCCACATAGCAAACAGTTC+CGG - chr5.2:4734354-4734373 MS.gene09964:intron 45.0%
TGGCAGGATCAACATCGAAT+AGG + chr5.2:4735093-4735112 None:intergenic 45.0%
TGGCAGTGCAATCACAATCA+AGG - chr5.2:4736290-4736309 MS.gene09964:CDS 45.0%
TGGGCCATGAAATGACAACT+GGG - chr5.2:4735243-4735262 MS.gene09964:intron 45.0%
TTGCTTGATCCGGTATTTGC+GGG + chr5.2:4734189-4734208 None:intergenic 45.0%
TTGGGGTTACGGTATTTGTG+CGG - chr5.2:4734124-4734143 MS.gene09964:intron 45.0%
TTTCCCTTGTGTTGTAGGGA+GGG + chr5.2:4733022-4733041 None:intergenic 45.0%
TTTCTTTGTTGGGTCTGGAG+AGG - chr5.2:4736761-4736780 MS.gene09964:intron 45.0%
! CCTTTACAACGCATTGGTGT+TGG - chr5.2:4736600-4736619 MS.gene09964:intron 45.0%
! GGGCCACAACCATAATGTTT+TGG - chr5.2:4736382-4736401 MS.gene09964:intron 45.0%
! TGACGGGTCCAAATAAACCA+TGG - chr5.2:4736925-4736944 MS.gene09964:CDS 45.0%
! TTTTCCCTTGTGTTGTAGGG+AGG + chr5.2:4733023-4733042 None:intergenic 45.0%
!! CATTTTGGTGGATGTAGGCT+TGG + chr5.2:4733843-4733862 None:intergenic 45.0%
!! TACCGGAACTGTTTGCTATG+TGG + chr5.2:4734359-4734378 None:intergenic 45.0%
!!! GCCATTGAGTGTGTTTTGGT+TGG - chr5.2:4736728-4736747 MS.gene09964:intron 45.0%
!!! TTTTTAACATAATATAATTT+CGG - chr5.2:4734903-4734922 MS.gene09964:intron 5.0%
AAGACCGTCATTGATGCTGC+TGG + chr5.2:4736486-4736505 None:intergenic 50.0%
AAGCATAGGGTCTTTGGCAG+CGG - chr5.2:4734061-4734080 MS.gene09964:intron 50.0%
ACGACCGCAATCTGAGTCAA+AGG + chr5.2:4734224-4734243 None:intergenic 50.0%
ACGCCACGTGTCCCAAAAAA+GGG - chr5.2:4735510-4735529 MS.gene09964:intron 50.0%
ACTCGGCATCGCCGTTAATT+TGG - chr5.2:4733155-4733174 MS.gene09964:CDS 50.0%
AGACCGTCATTGATGCTGCT+GGG + chr5.2:4736485-4736504 None:intergenic 50.0%
AGGGATGGGAAGGTAAGAGA+AGG + chr5.2:4734949-4734968 None:intergenic 50.0%
AGTCCTCTCAGTAGTGTCCA+TGG - chr5.2:4736626-4736645 MS.gene09964:CDS 50.0%
CAACCATGGACACTACTGAG+AGG + chr5.2:4736632-4736651 None:intergenic 50.0%
CAAGGTAGAGGTTGGGGTTA+CGG - chr5.2:4734113-4734132 MS.gene09964:intron 50.0%
CGAATGAAGCGGTCGTAGAA+AGG + chr5.2:4736537-4736556 None:intergenic 50.0%
CTCAATGGCATCTTTGCCGT+TGG + chr5.2:4736717-4736736 None:intergenic 50.0%
CTCAGTAGTGTCCATGGTTG+CGG - chr5.2:4736632-4736651 MS.gene09964:CDS 50.0%
GTGGGCCATGAAATGACAAC+TGG - chr5.2:4735242-4735261 MS.gene09964:intron 50.0%
TCAGATTGCGGTCGTGTTTG+TGG - chr5.2:4734229-4734248 MS.gene09964:intron 50.0%
TGCTTGGACAGCTGCAAAGA+TGG + chr5.2:4733501-4733520 None:intergenic 50.0%
TTGATCCTGCCAAGATGCGT+GGG - chr5.2:4735101-4735120 MS.gene09964:intron 50.0%
! TAGGAGGAGAAGTGATGGAG+AGG - chr5.2:4733124-4733143 MS.gene09964:CDS 50.0%
! TTGCGACTGGTCGAATGAAG+CGG + chr5.2:4736548-4736567 None:intergenic 50.0%
!! CAAGGACAAGAGACTTGCTG+AGG - chr5.2:4737058-4737077 MS.gene09964:CDS 50.0%
!! GGGTACCGGACAAGAAAACA+AGG + chr5.2:4734169-4734188 None:intergenic 50.0%
!!! GCGCTCCTTGTTTTCTTGTC+CGG - chr5.2:4734161-4734180 MS.gene09964:intron 50.0%
AAACTCCCACGCATCTTGGC+AGG + chr5.2:4735109-4735128 None:intergenic 55.0%
AGCACCCTCCCTACAACACA+AGG - chr5.2:4733015-4733034 MS.gene09964:CDS 55.0%
ATCTGATTACAAGGGCCGGC+CGG - chr5.2:4733056-4733075 MS.gene09964:CDS 55.0%
CGTAACCCCAACCTCTACCT+TGG + chr5.2:4734115-4734134 None:intergenic 55.0%
GACGCCACGTGTCCCAAAAA+AGG - chr5.2:4735509-4735528 MS.gene09964:intron 55.0%
GATCCGGTATTTGCGGGTAC+CGG + chr5.2:4734183-4734202 None:intergenic 55.0%
GCACCCTCCCTACAACACAA+GGG - chr5.2:4733016-4733035 MS.gene09964:CDS 55.0%
GCACTTTACATCACGGCCCT+CGG - chr5.2:4733924-4733943 MS.gene09964:intron 55.0%
GTTGATCCTGCCAAGATGCG+TGG - chr5.2:4735100-4735119 MS.gene09964:intron 55.0%
TCCTAATATCATGGCGGCCG+CGG + chr5.2:4733109-4733128 None:intergenic 55.0%
TCGTGTTTGTGGCTGCTTGG+AGG - chr5.2:4734240-4734259 MS.gene09964:intron 55.0%
TGCTGAGGCGGGCATAGAAT+TGG - chr5.2:4737073-4737092 MS.gene09964:CDS 55.0%
TGTCCGGTACCCGCAAATAC+CGG - chr5.2:4734177-4734196 MS.gene09964:intron 55.0%
! TATGAGTGCTGCCGCAACCA+TGG + chr5.2:4736646-4736665 None:intergenic 55.0%
!! ATTTTAGACCACCGGTGCCG+AGG + chr5.2:4733944-4733963 None:intergenic 55.0%
!! GACAAGAGACTTGCTGAGGC+GGG - chr5.2:4737062-4737081 MS.gene09964:CDS 55.0%
!! GGACAAGAGACTTGCTGAGG+CGG - chr5.2:4737061-4737080 MS.gene09964:CDS 55.0%
!! TTTTAGACCACCGGTGCCGA+GGG + chr5.2:4733943-4733962 None:intergenic 55.0%
!!! GGTCCCTTTTTTGGGACACG+TGG + chr5.2:4735516-4735535 None:intergenic 55.0%
ACAGGTCCACAACCGGTGGT+TGG - chr5.2:4733082-4733101 MS.gene09964:CDS 60.0%
CGGTCGTGTTTGTGGCTGCT+TGG - chr5.2:4734237-4734256 MS.gene09964:intron 60.0%
GCGGCCGCCATGATATTAGG+AGG - chr5.2:4733108-4733127 MS.gene09964:CDS 60.0%
TCCGCGGCCGCCATGATATT+AGG - chr5.2:4733105-4733124 MS.gene09964:CDS 60.0%
! ACCACCGGTTGTGGACCTGT+CGG + chr5.2:4733082-4733101 None:intergenic 60.0%
TACATCACGGCCCTCGGCAC+CGG - chr5.2:4733930-4733949 MS.gene09964:intron 65.0%
! CACAACCGGTGGTTGGTCCG+CGG - chr5.2:4733089-4733108 MS.gene09964:CDS 65.0%
CCGGCCGACAGGTCCACAAC+CGG - chr5.2:4733075-4733094 MS.gene09964:CDS 70.0%
CCGGTTGTGGACCTGTCGGC+CGG + chr5.2:4733078-4733097 None:intergenic 70.0%
GCCGACAGGTCCACAACCGG+TGG - chr5.2:4733078-4733097 MS.gene09964:CDS 70.0%
TTGTGGACCTGTCGGCCGGC+CGG + chr5.2:4733074-4733093 None:intergenic 70.0%
! CGCGGACCAACCACCGGTTG+TGG + chr5.2:4733091-4733110 None:intergenic 70.0%
! ATCACGGCCCTCGGCACCGG+TGG - chr5.2:4733933-4733952 MS.gene09964:intron 75.0%
! ACAAGGGCCGGCCGGCCGAC+AGG - chr5.2:4733064-4733083 MS.gene09964:CDS 80.0%
! GGCGGCCGCGGACCAACCAC+CGG + chr5.2:4733097-4733116 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 4733012 4737127 4733012 ID=MS.gene09964
chr5.2 mRNA 4733012 4737127 4733012 ID=MS.gene09964.t1;Parent=MS.gene09964
chr5.2 exon 4736835 4737127 4736835 ID=MS.gene09964.t1.exon1;Parent=MS.gene09964.t1
chr5.2 CDS 4736835 4737127 4736835 ID=cds.MS.gene09964.t1;Parent=MS.gene09964.t1
chr5.2 exon 4736616 4736655 4736616 ID=MS.gene09964.t1.exon2;Parent=MS.gene09964.t1
chr5.2 CDS 4736616 4736655 4736616 ID=cds.MS.gene09964.t1;Parent=MS.gene09964.t1
chr5.2 exon 4735764 4736332 4735764 ID=MS.gene09964.t1.exon3;Parent=MS.gene09964.t1
chr5.2 CDS 4735764 4736332 4735764 ID=cds.MS.gene09964.t1;Parent=MS.gene09964.t1
chr5.2 exon 4733012 4733885 4733012 ID=MS.gene09964.t1.exon4;Parent=MS.gene09964.t1
chr5.2 CDS 4733012 4733885 4733012 ID=cds.MS.gene09964.t1;Parent=MS.gene09964.t1
Gene Sequence

>MS.gene09964

ATGAGCACCCTCCCTACAACACAAGGGAAAACTGTCCCAGATGCATCTGATTACAAGGGCCGGCCGGCCGACAGGTCCACAACCGGTGGTTGGTCCGCGGCCGCCATGATATTAGGAGGAGAAGTGATGGAGAGGTTGACAACACTCGGCATCGCCGTTAATTTGGTCACATACTTGACCGGTACTATGCATTTGGGCAATGCTGCCTCTGCCAATGTTGTTACTAATTTCTTAGGAACCTCCTTTATGCTCTGTCTATTGGGTGGATTTCTTGCTGATACTTTTCTAGGAAGGTTCGAAATTTAATATATCTATAAAAAAAATTCCTTTCTTATTATGGAAAACTAAGACAAGACTTAGTTATTTTATTTTTGTTATTCAAATGATCCACATTAATTATGATTGGTTTTAATGCCTCGTGATTTCTGAGAGTTAATTTAATATTTTTTGCTTCCCATTCTTTGTTTGACAGATATCTCACCATTACCATCTTTGCAGCTGTCCAAGCAATTGTAAGATAATCTCAACTATTCATTTTGTTGTTTCCATTGTTTTCTAGTACTATTTTACATTCAAATCAAGATTTTAATATTAGTATTCATGTAAAAAAGTTTGCAACAATTCAAATAAATATTCTAATCAAAGTAACTCATTAATTTTTAATGATCTGACGATTATAATTGATTGACAATGTAAATTTTTCTTACGCTAACAATGCCTTTGAATTAAATCCTCAAAAATTTAATCATACCGTTGTTTAGTTCTTTGATATTGACGAATGTATGTTTATATTAGGGTGTAACAATATTGACGATATCAACTATAATTCCAAGCCTACATCCACCAAAATGCAAAGAAGACTCTAAATCTTGCATACAAGCAGACAGCAAGCAACTATTGGTGATGTATTTAGCACTTTACATCACGGCCCTCGGCACCGGTGGTCTAAAATCTAGTGTCTCTGGCTTTGGTTCTGATCAATTTGATGATTCTGATGACCAAGAAAAGAAGGGTATGATTAAATTTTTCAGCTGGTTCTATTTTTTCGTAAGCATAGGGTCTTTGGCAGCGGTGACTGTTCTTGTGTACATACAAGATAACCAAGGTAGAGGTTGGGGTTACGGTATTTGTGCGGTCGCAATTGTGGTTGCGCTCCTTGTTTTCTTGTCCGGTACCCGCAAATACCGGATCAAGCAACTTGTTGGTAGTCCTTTGACTCAGATTGCGGTCGTGTTTGTGGCTGCTTGGAGGAAGAGACACATGCAATTGCCCTCTGATTCTTCATTGCTCTATGAAGAGGATGATATCCTATGTGAAACACCTAAGACCAAGAAGCAAAGGATGCCACATAGCAAACAGTTCCGGTAAATTTTCTATTCATTCTTCTTAGTATTATAGTATAATAATTATTATTATACATAACTTTATTCTTTTTTAACTTAATAAGTTCTTTTTTTTTTTGACACTATGTTAACTTGCTATGTTTATGTCTTGTTGGTGTTCCTCTTAGTTTAAGTAGCTTAATCTAAAGTTTCTCTTCCAATGAATGGAACAATTTGAGTAATAATTTATATAAAAAAATTCAATTATAGTTTCTTGTTGACTAGACTACAATAATGTTTGCTAAACTAGTATTCATTCATTTATTTATTTATTGGATTGTAGAACAAGCAAAACTTTTTTCAATCCCGATCTTCATGATTGGAAACCATTAGAGAAGATTGTCTATACTAAAAACATTGACATAGTTGATATATTTGTGGTTGTTGACTCAAAATTGAATAGTTTGGATTTCAAATTCGTATATTTTTATTTTATTTGAAAACAAAAGTTGGATTATTTAATCTCAAATCTTACTATCACATATATTCTGAAAGTGTAATGCATCAATTTTTTAACATAATATAATTTCGGAGACAATATATCCACCTTTTCCTTCTCTTACCTTCCCATCCCTTCCATTTTCTCCTCTCTTTTCTTTACTCCCCAATTCCCAAACAAATTATAAAGGTTTAGATTCAAAGTTGAGTCAACACAAAGTGATAGAGTGGAATATACTGTATATGTCAAGGAGGGGCCCTATTCGATGTTGATCCTGCCAAGATGCGTGGGAGTTTCATTTTCAATTTACCAATTGAGAGCCGTATGCAACTAACAATAAAGACATTTATCATTATTGGGCCCCACTTGATGTAGAAAGAACAAATTATTGGGTGCCACATATTTAATAGTGGGCCATGAAATGACAACTGGGTTATTAAGGATCATTTGCTCCTTAATCATGGTGACAAGTCCACGCACGAGCTTAATAGTTAAGAGTAGAAACCAACTAATAATGTGTGGTTTATTCTCTCAAAAAATAATGTGTGGTTTATATAATAGTATAGTATTGGCTGAACTGCACTTTTCGCCCTCTAAGTTTTAAAATGTTGTGATTTTGGTTCCTTATTAAAAAAATTTGCAATTTTGGCCCCTTTCGTCCCAAAATTGTTGAGAAGACGCCACGTGTCCCAAAAAAGGGACCATAATCGCAACTTTTTGTAAAGATGTGAGGCCAAAAAGCATATTTCCCTTATGTTAGAGGGTCAAAAGAACATATTTCTCTAAACATGGGGGGTCACTTTTGCAATTTTTTTTAATAGGGGGCCAAAATTGCAACATTTTGAAACTTAGGGACAAAAAGTGCAGTTTAGCCTATAGTATTTTTTGCGTATCGCTTTGGATATTTTCCCTGCCTTTTGAGATTTGCAAGATATCCATCTAGTCTATCTCCTTTCGAAATTATTGCTTTTACATATTCACAAGCTTGTCAACGTCTAAAGTTTCAAAAATCTAACTAAGGATGAGAAAATTAACACCTTTCTTTGTTTTTAGTTTATGTCAAAAAAGAAGTATGCCTTGGACCTCTCATCAATCAAAATTACCTTAAAGTATATTAAGTAGATTGATTGAAAGGGTCAATAAACTTCGGTTACAGTTGAAATTAATTCGAAGCACTTAAGTTCATGTCTAATTGAAATAATTTTTAATTAGACTTTACTTATTTTACCACTGAATTACAAATTAATAAAGCTCATAGTCTATTTTTTTAAAAACATGAGACTTGAGACAAAAAAAAACATAATTTGTTCAAATTAATATGCATATTGCTCCTCTTTGGTGTTGCTTAATATGTATATTTCTCCTCTTTGTTATTACCTTGAAGATTAATGAATTAATTGATTTACATTTTGATCAAACAGTTTCTTAGACAAAGCGGCAATCAAAGGCATAGAAAGTGGCAGTGCAATCACAATCAAGGAGAAATGGTATATCTCTACCTTAACAGATGTGGAAGAAGTTAAAATGGTAATAAGGATGTTACCCATATGGGCCACAACCATAATGTTTTGGACAATCCATGCTCAAATGACAACATTCTCAGTATCACAAGCAACAACCATGGATTGTCACATTGGAACATTTCAAATCCCAGCAGCATCAATGACGGTCTTCTTAATCGGAACTATTCTCCTAACTGTTCCTTTCTACGACCGCTTCATTCGACCAGTCGCAAAAAAATTACTAAACAACTCACACGGATTCACTCCTTTACAACGCATTGGTGTTGGTTTAGTCCTCTCAGTAGTGTCCATGGTTGCGGCAGCACTCATAGAAATGAAGCGGTTGAAATTCGCACGATCACATGGTTTTGTAAACGATCCAACGGCAAAGATGCCATTGAGTGTGTTTTGGTTGGTGCCACAATTTTTCTTTGTTGGGTCTGGAGAGGCCTTTATGTATATGGGACAATTAGATTTTTTTTTAAGAGAATGTCCTAAAGGAATGAAAACTATGAGTACAGGGTTGTTCTTGAGCACACTCTCAATAGGGTTTTTCTTTAGCTCATTATTAGTGACTCTAGTGAACAATGTGACGGGTCCAAATAAACCATGGATTGCGGATAATCTTGATCAAGGGAGGCTCTATGATTTTTATTGGCTATTGGCTATGCTAAGTGCTATAAATGTGGTGATATATTTGGCTTGTGCTAAGTGGTATGTGTACAAGGACAAGAGACTTGCTGAGGCGGGCATAGAATTGGAAGAAATAGATGCCTCTACATTCCATGCATAG
Protein sequence

>MS.gene09964.t1

MSTLPTTQGKTVPDASDYKGRPADRSTTGGWSAAAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYLTITIFAAVQAIGVTILTISTIIPSLHPPKCKEDSKSCIQADSKQLLVMYLALYITALGTGGLKSSVSGFGSDQFDDSDDQEKKGMIKFFSWFYFFVSIGSLAAVTVLVYIQDNQGRGWGYGICAVAIVVALLVFLSGTRKYRIKQLVGSPLTQIAVVFVAAWRKRHMQLPSDSSLLYEEDDILCETPKTKKQRMPHSKQFRFLDKAAIKGIESGSAITIKEKWYISTLTDVEEVKMVIRMLPIWATTIMFWTIHAQMTTFSVSQATTMDCHIGTFQIPAASMTVFLIGTILLTVPFYDRFIRPVAKKLLNNSHGFTPLQRIGVGLVLSVVSMVAAALIEMKRLKFARSHGFVNDPTAKMPLSVFWLVPQFFFVGSGEAFMYMGQLDFFLRECPKGMKTMSTGLFLSTLSIGFFFSSLLVTLVNNVTGPNKPWIADNLDQGRLYDFYWLLAMLSAINVVIYLACAKWYVYKDKRLAEAGIELEEIDASTFHA