AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21160.t1 MTR_5g012290 98.308 591 9 1 1 590 1 591 0.0 1194
MS.gene21160.t1 MTR_5g012270 74.614 583 143 4 1 579 1 582 0.0 904
MS.gene21160.t1 MTR_4g101380 72.391 594 159 5 1 590 1 593 0.0 862
MS.gene21160.t1 MTR_4g114340 57.268 571 219 8 11 572 8 562 0.0 579
MS.gene21160.t1 MTR_5g085850 50.624 561 249 6 15 569 18 556 0.0 523
MS.gene21160.t1 MTR_4g015080 45.781 557 289 9 17 569 24 571 1.19e-169 494
MS.gene21160.t1 MTR_7g067010 45.781 557 289 9 17 569 14 561 7.09e-166 484
MS.gene21160.t1 MTR_3g462710 44.444 558 297 8 17 569 14 563 9.68e-161 471
MS.gene21160.t1 MTR_5g055000 41.741 563 318 8 25 582 16 573 2.96e-152 450
MS.gene21160.t1 MTR_3g112460 40.636 566 315 10 17 578 13 561 1.24e-148 441
MS.gene21160.t1 MTR_3g112470 40.035 572 321 11 17 583 13 567 1.13e-144 430
MS.gene21160.t1 MTR_3g112450 40.105 571 318 9 14 575 10 565 1.97e-142 425
MS.gene21160.t1 MTR_7g098200 40.587 579 323 9 17 587 19 584 5.47e-141 422
MS.gene21160.t1 MTR_7g088825 37.828 571 339 7 21 587 16 574 6.75e-141 422
MS.gene21160.t1 MTR_7g098230 39.858 562 321 8 34 589 33 583 4.11e-136 409
MS.gene21160.t1 MTR_7g098200 40.069 579 316 10 17 587 19 574 5.22e-136 409
MS.gene21160.t1 MTR_1g075440 39.138 557 327 6 17 569 18 566 7.98e-135 406
MS.gene21160.t1 MTR_1g041835 39.930 571 330 6 17 583 17 578 1.36e-134 405
MS.gene21160.t1 MTR_7g098040 39.389 589 332 10 7 587 18 589 6.35e-134 404
MS.gene21160.t1 MTR_7g010820 38.632 585 338 7 11 582 10 586 9.03e-133 400
MS.gene21160.t1 MTR_1g041815 39.487 585 337 7 7 587 11 582 1.54e-131 397
MS.gene21160.t1 MTR_5g014150 37.024 578 352 6 11 582 28 599 7.77e-131 396
MS.gene21160.t1 MTR_4g098800 36.555 569 340 7 7 566 16 572 8.20e-131 395
MS.gene21160.t1 MTR_4g098800 36.555 569 340 7 7 566 81 637 5.12e-130 395
MS.gene21160.t1 MTR_1g042310 38.095 567 335 8 7 569 10 564 9.94e-130 393
MS.gene21160.t1 MTR_7g098160 38.144 582 339 9 7 581 17 584 6.77e-129 391
MS.gene21160.t1 MTR_4g107670 38.609 575 316 11 17 570 14 572 8.87e-129 390
MS.gene21160.t1 MTR_3g462710 44.372 462 244 8 113 569 1 454 1.74e-128 385
MS.gene21160.t1 MTR_7g005930 36.625 557 337 7 14 566 22 566 3.98e-128 388
MS.gene21160.t1 MTR_7g088790 37.455 550 337 6 24 569 26 572 1.05e-127 388
MS.gene21160.t1 MTR_7g098090 38.370 589 333 11 7 581 17 589 1.74e-127 387
MS.gene21160.t1 MTR_1g041875 38.779 557 322 7 17 569 19 560 3.76e-127 386
MS.gene21160.t1 MTR_7g088820 34.768 581 367 9 17 590 17 592 4.82e-127 386
MS.gene21160.t1 MTR_3g100980 37.809 566 329 8 21 577 10 561 5.09e-127 385
MS.gene21160.t1 MTR_2g005130 37.716 578 324 12 3 569 11 563 6.78e-126 383
MS.gene21160.t1 MTR_7g098180 36.815 584 352 7 5 581 9 582 8.98e-126 383
MS.gene21160.t1 MTR_8g469310 38.144 582 331 7 4 569 3 571 6.26e-125 380
MS.gene21160.t1 MTR_4g019580 38.095 567 331 12 10 570 18 570 3.65e-124 378
MS.gene21160.t1 MTR_7g098220 37.743 567 337 7 19 579 22 578 4.18e-124 378
MS.gene21160.t1 MTR_7g065080 38.095 567 325 12 10 570 13 559 8.05e-124 377
MS.gene21160.t1 MTR_3g069500 38.313 569 325 11 6 569 13 560 2.50e-122 373
MS.gene21160.t1 MTR_0294s0020 38.394 573 317 10 11 577 15 557 2.99e-122 372
MS.gene21160.t1 MTR_1g041885 39.842 507 286 7 50 552 5 496 1.03e-121 370
MS.gene21160.t1 MTR_7g013270 34.975 589 357 9 8 586 71 643 1.18e-121 374
MS.gene21160.t1 MTR_4g033325 38.103 580 323 11 4 577 8 557 1.44e-121 370
MS.gene21160.t1 MTR_3g069420 36.364 572 342 10 6 569 12 569 2.08e-121 371
MS.gene21160.t1 MTR_1g042310 37.925 530 317 7 44 569 6 527 2.22e-121 370
MS.gene21160.t1 MTR_3g100980 36.027 594 329 9 21 577 10 589 6.90e-121 370
MS.gene21160.t1 MTR_5g038380 39.024 574 316 11 17 571 18 576 1.00e-120 369
MS.gene21160.t1 MTR_1g042310 37.977 524 313 7 50 569 5 520 6.81e-120 366
MS.gene21160.t1 MTR_3g072300 37.324 568 337 11 17 576 14 570 7.09e-120 367
MS.gene21160.t1 MTR_5g038060 36.770 582 341 12 1 569 10 577 4.17e-119 366
MS.gene21160.t1 MTR_1g116930 35.951 573 348 10 17 585 14 571 6.98e-119 365
MS.gene21160.t1 MTR_2g017750 37.018 570 341 12 17 571 24 590 2.22e-118 363
MS.gene21160.t1 MTR_3g069440 37.456 574 337 11 17 585 23 579 3.67e-118 363
MS.gene21160.t1 MTR_1g085090 36.204 569 326 12 25 582 17 559 7.28e-118 362
MS.gene21160.t1 MTR_4g033315 38.146 561 313 10 17 571 21 553 9.22e-118 361
MS.gene21160.t1 MTR_4g033310 38.146 561 313 10 17 571 21 553 9.22e-118 361
MS.gene21160.t1 MTR_8g087810 37.824 579 340 12 17 579 11 585 1.36e-117 361
MS.gene21160.t1 MTR_7g088820 34.972 529 334 8 69 590 5 530 2.30e-117 359
MS.gene21160.t1 MTR_8g087780 37.694 581 337 13 17 579 11 584 8.17e-117 359
MS.gene21160.t1 MTR_3g005010 38.380 568 305 12 10 569 13 543 2.83e-116 357
MS.gene21160.t1 MTR_7g006540 37.148 568 332 7 24 575 60 618 4.04e-116 359
MS.gene21160.t1 MTR_7g111260 36.106 565 334 9 25 583 17 560 6.43e-116 357
MS.gene21160.t1 MTR_7g098220 37.454 542 323 7 44 579 3 534 2.23e-115 354
MS.gene21160.t1 MTR_4g107580 31.728 602 388 9 1 587 1 594 3.44e-113 350
MS.gene21160.t1 MTR_4g033375 38.659 507 280 8 12 514 17 496 1.33e-112 345
MS.gene21160.t1 MTR_8g469480 35.740 554 332 10 30 569 41 584 1.42e-111 346
MS.gene21160.t1 MTR_3g014790 36.136 559 329 8 25 575 15 553 3.36e-111 344
MS.gene21160.t1 MTR_4g033330 38.000 550 307 9 8 551 12 533 1.24e-110 342
MS.gene21160.t1 MTR_8g038880 36.155 567 328 9 25 577 16 562 1.29e-110 343
MS.gene21160.t1 MTR_4g107530 31.491 597 379 11 7 583 7 593 1.81e-108 338
MS.gene21160.t1 MTR_7g088820 35.477 482 301 8 116 590 4 482 2.39e-108 334
MS.gene21160.t1 MTR_4g033395 38.659 507 280 8 12 514 17 496 9.78e-108 333
MS.gene21160.t1 MTR_4g107510 31.787 582 378 8 2 570 10 585 2.36e-107 335
MS.gene21160.t1 MTR_4g123537 35.642 592 352 11 7 590 21 591 1.03e-106 334
MS.gene21160.t1 MTR_7g098200 38.831 479 276 8 115 587 3 470 2.13e-106 329
MS.gene21160.t1 MTR_8g469470 32.709 587 372 9 3 573 6 585 5.23e-106 331
MS.gene21160.t1 MTR_7g065080 37.755 490 280 11 86 570 3 472 6.37e-106 328
MS.gene21160.t1 MTR_7g098150 39.778 450 250 7 7 450 17 451 6.62e-100 312
MS.gene21160.t1 MTR_5g038190 31.606 579 375 10 1 569 1 568 4.69e-95 302
MS.gene21160.t1 MTR_4g033325 37.288 472 260 11 112 577 18 459 4.95e-95 298
MS.gene21160.t1 MTR_2g101590 32.682 563 343 15 21 566 22 565 6.85e-93 298
MS.gene21160.t1 MTR_4g033325 37.723 448 252 10 136 577 7 433 1.10e-92 291
MS.gene21160.t1 MTR_4g033385 36.632 475 268 9 109 577 13 460 1.58e-92 292
MS.gene21160.t1 MTR_4g011280 30.986 568 360 13 29 582 34 583 1.02e-90 292
MS.gene21160.t1 MTR_2g101640 31.643 572 357 13 11 566 9 562 1.95e-89 289
MS.gene21160.t1 MTR_2g101610 31.119 572 356 14 14 566 14 566 7.99e-89 288
MS.gene21160.t1 MTR_1g026740 32.246 552 355 12 23 566 13 553 1.34e-88 285
MS.gene21160.t1 MTR_2g101650 28.843 579 384 12 25 589 22 586 4.26e-88 285
MS.gene21160.t1 MTR_8g103233 32.661 545 344 9 29 563 19 550 4.81e-88 284
MS.gene21160.t1 MTR_2g093160 32.437 558 335 13 26 570 20 548 1.49e-87 282
MS.gene21160.t1 MTR_2g093180 33.574 554 335 11 26 570 20 549 1.35e-86 280
MS.gene21160.t1 MTR_4g024930 31.283 569 350 10 5 566 18 552 1.99e-86 280
MS.gene21160.t1 MTR_1g026750 32.671 554 346 13 25 566 16 554 1.59e-83 272
MS.gene21160.t1 MTR_4g107610 29.636 577 380 12 17 579 18 582 5.90e-82 269
MS.gene21160.t1 MTR_7g064780 30.017 583 380 12 16 584 15 583 1.02e-79 263
MS.gene21160.t1 MTR_7g051880 33.752 557 322 13 14 566 12 525 2.27e-78 257
MS.gene21160.t1 MTR_1g009200 30.996 542 352 11 29 560 29 558 7.43e-78 258
MS.gene21160.t1 MTR_7g052600 34.173 556 321 13 14 566 12 525 7.96e-78 256
MS.gene21160.t1 MTR_2g093640 30.594 572 363 12 8 570 2 548 1.12e-77 256
MS.gene21160.t1 MTR_2g101560 30.404 569 364 15 14 566 14 566 3.00e-77 257
MS.gene21160.t1 MTR_1g026770 31.009 545 358 12 29 566 17 550 3.93e-77 255
MS.gene21160.t1 MTR_7g051830 33.631 559 320 14 14 566 12 525 3.97e-76 251
MS.gene21160.t1 MTR_6g008690 31.892 555 313 14 43 571 23 538 5.70e-76 251
MS.gene21160.t1 MTR_7g064800 29.655 580 384 10 23 586 22 593 9.73e-74 247
MS.gene21160.t1 MTR_1g057460 29.825 570 345 17 14 566 33 564 1.90e-73 246
MS.gene21160.t1 MTR_7g098210 31.203 532 270 12 46 570 1 443 1.95e-71 236
MS.gene21160.t1 MTR_1g057460 30.286 525 321 16 55 566 1 493 1.61e-68 231
MS.gene21160.t1 MTR_0236s0050 30.476 525 320 17 55 566 1 493 2.97e-64 219
MS.gene21160.t1 MTR_4g033310 38.351 279 161 4 297 571 218 489 8.01e-57 199
MS.gene21160.t1 MTR_4g033310 39.888 178 96 2 17 194 21 187 8.41e-32 129
MS.gene21160.t1 MTR_1g009170 26.683 401 235 11 154 548 9 356 1.17e-34 135
MS.gene21160.t1 MTR_3g065350 41.916 167 83 4 340 502 1 157 2.43e-28 111
MS.gene21160.t1 MTR_4g033390 32.323 99 60 2 486 582 30 123 1.49e-13 68.2
MS.gene21160.t1 MTR_2g093650 26.289 194 86 5 355 547 41 178 4.87e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21160.t1 AT1G12110 63.077 585 207 6 3 582 2 582 0.0 740
MS.gene21160.t1 AT2G26690 56.228 562 226 5 11 566 8 555 0.0 598
MS.gene21160.t1 AT2G26690 55.243 534 219 5 39 566 3 522 0.0 555
MS.gene21160.t1 AT2G26690 54.962 524 216 5 49 566 1 510 0.0 541
MS.gene21160.t1 AT3G21670 52.220 563 242 8 14 569 16 558 0.0 534
MS.gene21160.t1 AT5G01180 43.088 557 305 7 17 569 15 563 2.10e-164 481
MS.gene21160.t1 AT5G01180 43.088 557 305 7 17 569 15 563 2.10e-164 481
MS.gene21160.t1 AT5G01180 43.088 557 305 7 17 569 15 563 2.10e-164 481
MS.gene21160.t1 AT3G54140 42.857 567 309 8 7 569 8 563 3.51e-162 475
MS.gene21160.t1 AT3G54140 42.857 567 309 8 7 569 8 563 3.51e-162 475
MS.gene21160.t1 AT2G02040 42.397 559 312 6 17 572 31 582 9.03e-158 464
MS.gene21160.t1 AT1G68570 42.732 571 312 9 7 569 5 568 3.25e-144 430
MS.gene21160.t1 AT1G68570 43.970 539 289 8 39 569 5 538 1.33e-141 422
MS.gene21160.t1 AT1G62200 39.292 565 326 7 6 564 30 583 2.07e-135 407
MS.gene21160.t1 AT1G62200 38.007 592 325 9 6 564 30 612 2.37e-131 398
MS.gene21160.t1 AT1G62200 38.007 592 325 9 6 564 44 626 3.05e-131 398
MS.gene21160.t1 AT1G59740 37.809 566 332 8 14 572 28 580 8.53e-130 393
MS.gene21160.t1 AT4G21680 38.298 564 327 6 17 568 18 572 2.14e-125 381
MS.gene21160.t1 AT5G46050 37.108 574 342 9 17 584 17 577 3.08e-125 381
MS.gene21160.t1 AT2G02020 37.179 546 298 7 17 560 32 534 1.76e-124 378
MS.gene21160.t1 AT5G46040 37.238 572 342 9 17 582 17 577 1.19e-123 377
MS.gene21160.t1 AT1G32450 36.022 558 346 6 17 566 27 581 1.94e-123 377
MS.gene21160.t1 AT2G37900 36.620 568 335 8 8 569 18 566 3.71e-122 373
MS.gene21160.t1 AT3G53960 38.179 571 330 11 8 569 17 573 1.51e-121 372
MS.gene21160.t1 AT1G69850 37.544 570 338 6 16 570 14 580 1.20e-120 369
MS.gene21160.t1 AT5G19640 37.454 542 316 7 28 566 60 581 1.60e-120 370
MS.gene21160.t1 AT1G33440 38.169 579 327 12 17 585 28 585 4.24e-119 365
MS.gene21160.t1 AT1G72140 36.632 576 317 9 9 572 16 555 1.27e-118 363
MS.gene21160.t1 AT3G54450 34.867 565 344 8 24 582 9 555 5.29e-118 361
MS.gene21160.t1 AT5G13400 36.672 589 348 11 9 586 47 621 2.44e-117 362
MS.gene21160.t1 AT2G40460 38.380 568 325 11 7 569 8 555 2.69e-117 360
MS.gene21160.t1 AT1G27040 38.393 560 323 8 16 568 16 560 8.90e-117 358
MS.gene21160.t1 AT1G27040 38.393 560 323 8 16 568 12 556 9.60e-117 358
MS.gene21160.t1 AT1G69870 34.932 584 349 13 11 584 41 603 5.20e-112 348
MS.gene21160.t1 AT1G27040 39.286 532 307 8 41 568 9 528 2.33e-111 343
MS.gene21160.t1 AT1G22540 38.819 559 310 9 17 569 20 552 8.33e-109 338
MS.gene21160.t1 AT5G62730 35.512 566 332 9 17 572 46 588 1.14e-108 338
MS.gene21160.t1 AT2G37900 36.217 497 293 7 79 570 11 488 1.98e-107 332
MS.gene21160.t1 AT2G02020 35.348 546 287 10 17 560 32 513 3.89e-107 332
MS.gene21160.t1 AT1G22570 36.491 570 326 11 12 569 15 560 1.27e-105 330
MS.gene21160.t1 AT1G72120 35.727 571 330 10 8 569 10 552 1.78e-104 326
MS.gene21160.t1 AT1G22550 34.851 571 335 10 11 569 14 559 1.02e-103 325
MS.gene21160.t1 AT5G62730 35.273 550 323 9 33 572 3 529 1.10e-103 323
MS.gene21160.t1 AT1G72125 34.555 573 338 12 8 569 10 556 7.92e-103 322
MS.gene21160.t1 AT1G72130 36.151 556 299 12 25 569 23 533 1.97e-100 315
MS.gene21160.t1 AT1G18880 31.712 555 356 9 30 570 22 567 7.10e-100 315
MS.gene21160.t1 AT5G46050 36.555 476 283 9 115 584 3 465 3.81e-97 305
MS.gene21160.t1 AT1G22570 36.029 544 312 11 38 569 4 523 2.11e-95 302
MS.gene21160.t1 AT1G52190 31.712 555 359 8 25 566 19 566 3.63e-95 303
MS.gene21160.t1 AT3G25260 33.394 551 320 10 17 566 11 515 5.68e-95 300
MS.gene21160.t1 AT5G62680 32.558 559 346 12 30 569 46 592 2.06e-94 302
MS.gene21160.t1 AT3G47960 33.094 556 345 11 30 569 64 608 2.45e-94 302
MS.gene21160.t1 AT3G16180 31.690 568 367 11 13 566 5 565 3.33e-92 295
MS.gene21160.t1 AT3G25280 33.755 554 322 11 16 566 10 521 9.23e-92 292
MS.gene21160.t1 AT1G27080 32.862 566 346 12 29 584 16 557 4.35e-89 287
MS.gene21160.t1 AT3G45660 30.360 583 376 9 9 589 3 557 2.80e-88 284
MS.gene21160.t1 AT3G45660 30.360 583 376 9 9 589 3 557 2.80e-88 284
MS.gene21160.t1 AT3G45660 30.360 583 376 9 9 589 24 578 7.79e-88 283
MS.gene21160.t1 AT3G45710 30.123 571 371 12 21 587 14 560 2.49e-84 274
MS.gene21160.t1 AT1G69860 30.969 578 360 13 4 570 1 550 3.80e-83 271
MS.gene21160.t1 AT3G45650 29.730 555 362 9 23 572 15 546 6.08e-82 268
MS.gene21160.t1 AT3G45680 29.682 566 366 10 26 586 19 557 5.73e-81 265
MS.gene21160.t1 AT1G27080 32.775 537 327 12 58 584 3 515 9.38e-79 258
MS.gene21160.t1 AT3G45720 29.699 532 337 11 46 569 38 540 4.25e-77 254
MS.gene21160.t1 AT3G45650 28.399 581 362 10 23 572 15 572 6.76e-77 255
MS.gene21160.t1 AT3G45700 29.553 582 357 15 16 583 4 546 1.32e-76 253
MS.gene21160.t1 AT1G72130 35.080 439 241 10 141 568 9 414 2.66e-76 249
MS.gene21160.t1 AT1G72130 35.080 439 241 10 141 568 9 414 2.66e-76 249
MS.gene21160.t1 AT5G14940 31.444 547 321 13 43 566 23 538 9.20e-76 251
MS.gene21160.t1 AT3G01350 31.239 589 343 13 24 582 4 560 1.69e-75 251
MS.gene21160.t1 AT5G28470 29.159 559 371 10 25 572 15 559 4.88e-75 249
MS.gene21160.t1 AT5G28470 28.674 558 373 10 25 572 15 557 2.62e-72 242
MS.gene21160.t1 AT3G45690 29.015 548 322 13 26 570 17 500 1.40e-68 231
MS.gene21160.t1 AT5G11570 26.916 535 305 10 37 566 23 476 4.63e-52 186
MS.gene21160.t1 AT2G38100 26.857 525 341 14 55 572 2 490 1.13e-41 157
MS.gene21160.t1 AT2G38100 26.857 525 341 14 55 572 24 512 2.87e-41 157
MS.gene21160.t1 AT2G38100 26.857 525 341 14 55 572 18 506 3.23e-41 157

Find 159 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGCAATCCATGGTTTATT+TGG 0.146472 5.1:+5588018 None:intergenic
CTCCTTTATGCTCTGTCTAT+TGG 0.183421 5.1:-5591686 MS.gene21160:CDS
TTAGAGTCTTCTTTGCATTT+TGG 0.212251 5.1:+5591082 None:intergenic
ATGTGGCATCCTTTGCTTCT+TGG 0.223376 5.1:+5590598 None:intergenic
ACTCGGCATCGCCGTTAATT+TGG 0.225881 5.1:-5591782 MS.gene21160:CDS
TCCTTTATGCTCTGTCTATT+GGG 0.231899 5.1:-5591685 MS.gene21160:CDS
TGGAGAGGCCTTTATGTATA+TGG 0.257387 5.1:-5588175 MS.gene21160:CDS
ATCCTTTGCTTCTTGGTCTT+AGG 0.272928 5.1:+5590605 None:intergenic
AATGTTGTTACTAATTTCTT+AGG 0.273061 5.1:-5591712 MS.gene21160:CDS
CTTGACCGGTACTATGCATT+TGG 0.289091 5.1:-5591752 MS.gene21160:CDS
ATGGATTGTCCAAAACATTA+TGG 0.311360 5.1:+5588557 None:intergenic
CATTATGGTTGTGGCCCATA+TGG 0.330752 5.1:+5588572 None:intergenic
TATAAATGTGGTGATATATT+TGG 0.333642 5.1:-5587938 MS.gene21160:CDS
TTTCGTAAGCATAGGGTCTT+TGG 0.338269 5.1:-5590882 MS.gene21160:CDS
GGGCCACAACCATAATGTTT+TGG 0.348324 5.1:-5588566 MS.gene21160:CDS
AGATGTGGAAGAAGTTAAAA+TGG 0.350382 5.1:-5588610 MS.gene21160:CDS
AAATCTAGTGTCTCGGGCTT+TGG 0.351593 5.1:-5590977 MS.gene21160:CDS
TTGCTTGATCCGGTACTTGC+GGG 0.377777 5.1:+5590751 None:intergenic
AAGAAGTTAAAATGGTAATA+AGG 0.380191 5.1:-5588602 MS.gene21160:CDS
TTCTTGAGCACACTCTCAAT+AGG 0.380892 5.1:-5588090 MS.gene21160:CDS
AGATGCCATTGAGTGTGTTT+TGG 0.390364 5.1:-5588227 MS.gene21160:CDS
TGCTGAGGCGGGCATAGAAT+TGG 0.392359 5.1:-5587878 MS.gene21160:CDS
CAACACCAATGCGTTGTAAA+GGG 0.396868 5.1:+5588352 None:intergenic
CAAGGTAGAGGTTGGGGTTA+CGG 0.404173 5.1:-5590824 MS.gene21160:CDS
AACTTCTTCCACATCTGTTA+AGG 0.406906 5.1:+5588617 None:intergenic
TCTTGAGCACACTCTCAATA+GGG 0.411173 5.1:-5588089 MS.gene21160:CDS
TCCGCGGCCGCCATGATATT+AGG 0.415550 5.1:-5591832 MS.gene21160:CDS
TAATAAGGATGTTACCCATA+TGG 0.419503 5.1:-5588587 MS.gene21160:CDS
CTCAGTAGTGTCCATGGTTG+CGG 0.432988 5.1:-5588319 MS.gene21160:CDS
CAATCACAATCAAGGAGAAA+TGG 0.435261 5.1:-5588650 MS.gene21160:CDS
TTTCTAAGAGAATGTCCTAA+AGG 0.437158 5.1:-5588138 MS.gene21160:CDS
GAGATTATCTTACAATTGCT+TGG 0.439655 5.1:+5591423 None:intergenic
TTGACCGGTACTATGCATTT+GGG 0.441330 5.1:-5591751 MS.gene21160:CDS
TCAATGACGGTCTTCTTAAT+CGG 0.441765 5.1:-5588456 MS.gene21160:CDS
TGCCACATAGCAAACAGTTC+CGG 0.441974 5.1:-5590583 MS.gene21160:intron
TACATCACGGCCCTCGGCAC+CGG 0.448076 5.1:-5591007 MS.gene21160:CDS
CCCGGATGCATCTGATTACA+AGG 0.448500 5.1:-5591890 MS.gene21160:CDS
GCCTCTACATTCCATGCATA+GGG 0.450174 5.1:-5587844 None:intergenic
TCCTAATATCATGGCGGCCG+CGG 0.451996 5.1:+5591831 None:intergenic
GGTCGTAGAAAGGAACAGTT+AGG 0.460679 5.1:+5588424 None:intergenic
TTTCCCTTGTGTTGTAGGGA+GGG 0.463914 5.1:+5591918 None:intergenic
AGATAACCAAGGTAGAGGTT+GGG 0.464346 5.1:-5590831 MS.gene21160:CDS
TTCAGATGAGCAAGAAAAGA+AGG 0.464853 5.1:-5590936 MS.gene21160:CDS
AATTTGGTCACATACTTGAC+CGG 0.465748 5.1:-5591766 MS.gene21160:CDS
GGAATGAAAACTATGAGTAC+AGG 0.465946 5.1:-5588117 MS.gene21160:CDS
CGGTCGTGTTTGTGGCTGCT+TGG 0.467550 5.1:-5590700 MS.gene21160:CDS
CCAACACCAATGCGTTGTAA+AGG 0.467762 5.1:+5588351 None:intergenic
TAATTGTCCCATATACATAA+AGG 0.467859 5.1:+5588167 None:intergenic
TCAGATTGCGGTCGTGTTTG+TGG 0.468178 5.1:-5590708 MS.gene21160:CDS
CTCAATGGCATCTTTGCCGT+TGG 0.474314 5.1:+5588237 None:intergenic
AAGACCGTCATTGATGCTGC+TGG 0.476879 5.1:+5588465 None:intergenic
ACAAGGGCCGGCCGGCCGAC+AGG 0.476979 5.1:-5591873 MS.gene21160:CDS
TGGTCTAAAATCTAGTGTCT+CGG 0.477102 5.1:-5590984 MS.gene21160:CDS
CGCGGACCAACCACCGGTTG+TGG 0.478323 5.1:+5591849 None:intergenic
AGCAGACAGTAAGCAACTAT+TGG 0.478485 5.1:-5591047 MS.gene21160:CDS
CACTTCTCCTCCTAATATCA+TGG 0.480052 5.1:+5591822 None:intergenic
TGCTTGGACAGCTGCAAAGA+TGG 0.481351 5.1:+5591439 None:intergenic
ACCCAATAGACAGAGCATAA+AGG 0.482538 5.1:+5591684 None:intergenic
TTGAAATTCGCACGATCACA+TGG 0.486954 5.1:-5588273 MS.gene21160:CDS
CGAATGAAGCGGTCGTAGAA+AGG 0.491283 5.1:+5588414 None:intergenic
CCTTTACAACGCATTGGTGT+TGG 0.492431 5.1:-5588351 MS.gene21160:CDS
AATAAGGATGTTACCCATAT+GGG 0.493344 5.1:-5588586 MS.gene21160:CDS
CCCTTGTAATCAGATGCATC+CGG 0.496692 5.1:+5591889 None:intergenic
GGAGAGGCCTTTATGTATAT+GGG 0.496953 5.1:-5588174 MS.gene21160:CDS
AGTCCTCTCAGTAGTGTCCA+TGG 0.500956 5.1:-5588325 MS.gene21160:CDS
TATTTGTGCGGTCGCAATTG+TGG 0.501020 5.1:-5590801 MS.gene21160:CDS
CAAGTATGTGACCAAATTAA+CGG 0.502223 5.1:+5591771 None:intergenic
TACCGGATCAAGCAACTTGT+TGG 0.502233 5.1:-5590743 MS.gene21160:CDS
TAGGAGGAGAAGTGATGGAG+AGG 0.502676 5.1:-5591813 MS.gene21160:CDS
AAGATAACCAAGGTAGAGGT+TGG 0.503461 5.1:-5590832 MS.gene21160:CDS
TGTCCAAAACATTATGGTTG+TGG 0.504094 5.1:+5588563 None:intergenic
TTTATGCTCTGTCTATTGGG+TGG 0.509907 5.1:-5591682 MS.gene21160:CDS
TACCAACAAGTTGCTTGATC+CGG 0.510732 5.1:+5590741 None:intergenic
TACCGGAACTGTTTGCTATG+TGG 0.513274 5.1:+5590581 None:intergenic
TTCACCCCTTTACAACGCAT+TGG 0.516459 5.1:-5588357 MS.gene21160:CDS
ACCAACCAAAACACACTCAA+TGG 0.517641 5.1:+5588222 None:intergenic
TCGTGTTTGTGGCTGCTTGG+AGG 0.518539 5.1:-5590697 MS.gene21160:CDS
TTCTTCATTGCTCTATGAAG+AGG 0.518830 5.1:-5590648 MS.gene21160:CDS
CCGGTTGTGGACCTGTCGGC+CGG 0.519819 5.1:+5591862 None:intergenic
GGTCTAAAATCTAGTGTCTC+GGG 0.522143 5.1:-5590983 MS.gene21160:CDS
GTTGCTTGATCCGGTACTTG+CGG 0.522486 5.1:+5590750 None:intergenic
TTTCTTTGTTGGGTCTGGAG+AGG 0.523163 5.1:-5588190 MS.gene21160:CDS
TTGTGGACCTGTCGGCCGGC+CGG 0.524891 5.1:+5591866 None:intergenic
CCGGCCGACAGGTCCACAAC+CGG 0.525288 5.1:-5591862 MS.gene21160:CDS
GCACTTTACATCACGGCCCT+CGG 0.525416 5.1:-5591013 MS.gene21160:CDS
GACAAGAGACTTGCTGAGGC+GGG 0.533846 5.1:-5587889 MS.gene21160:CDS
ATTGCGGATAATCTTGATCA+AGG 0.535890 5.1:-5588003 MS.gene21160:CDS
GATAACCAAGGTAGAGGTTG+GGG 0.537914 5.1:-5590830 MS.gene21160:CDS
ATCTGATTACAAGGGCCGGC+CGG 0.538203 5.1:-5591881 MS.gene21160:CDS
AACACAAGGGAAAACTGTCC+CGG 0.539809 5.1:-5591908 MS.gene21160:CDS
TGGTCTTAGGTGTTTCACAT+AGG 0.541798 5.1:+5590618 None:intergenic
TGTCCGGTACCCGCAAGTAC+CGG 0.542640 5.1:-5590760 MS.gene21160:CDS
GGCGGCCGCGGACCAACCAC+CGG 0.543833 5.1:+5591843 None:intergenic
ATCACGGCCCTCGGCACCGG+TGG 0.545009 5.1:-5591004 MS.gene21160:CDS
ATTATGGTTGTGGCCCATAT+GGG 0.546937 5.1:+5588573 None:intergenic
CGTAACCCCAACCTCTACCT+TGG 0.549093 5.1:+5590825 None:intergenic
TGGCAGTGCAATCACAATCA+AGG 0.551937 5.1:-5588658 MS.gene21160:CDS
ATCTGAATCGTCAAATTGAT+CGG 0.553418 5.1:+5590952 None:intergenic
TTAGACAAAGCGGCAATCAA+AGG 0.554882 5.1:-5588690 MS.gene21160:CDS
ATGCATCTGATTACAAGGGC+CGG 0.558891 5.1:-5591885 MS.gene21160:CDS
GATATTAGGAGGAGAAGTGA+TGG 0.558978 5.1:-5591818 MS.gene21160:CDS
TATGAGTGCTGCCGCAACCA+TGG 0.562291 5.1:+5588308 None:intergenic
CACCTAAGACCAAGAAGCAA+AGG 0.564356 5.1:-5590607 MS.gene21160:CDS
TGCCTCTACATTCCATGCAT+AGG 0.564381 5.1:-5587845 None:intergenic
ACAACCATGGATTGTCACAT+TGG 0.565357 5.1:-5588501 MS.gene21160:CDS
AAGCATAGGGTCTTTGGCAG+CGG 0.567922 5.1:-5590876 MS.gene21160:CDS
GATCCGGTACTTGCGGGTAC+CGG 0.569345 5.1:+5590757 None:intergenic
TGTTCCAATGTGACAATCCA+TGG 0.571949 5.1:+5588497 None:intergenic
CCTTGTAATCAGATGCATCC+GGG 0.572340 5.1:+5591890 None:intergenic
ACGACCGCAATCTGAGTCAA+AGG 0.573004 5.1:+5590716 None:intergenic
TCCAAATAAACCATGGATTG+CGG 0.574971 5.1:-5588019 MS.gene21160:CDS
GGACAAGAGACTTGCTGAGG+CGG 0.576506 5.1:-5587890 MS.gene21160:CDS
TCAAGATTATCCGCAATCCA+TGG 0.577407 5.1:+5588009 None:intergenic
CACAACCGGTGGTTGGTCCG+CGG 0.578072 5.1:-5591848 MS.gene21160:CDS
TAAGAAATTAGTAACAACAT+TGG 0.578419 5.1:+5591714 None:intergenic
GCAATCAAAGGCATAGAAAG+TGG 0.579246 5.1:-5588678 MS.gene21160:CDS
TATCTCTACCTTAACAGATG+TGG 0.585721 5.1:-5588625 MS.gene21160:CDS
ATTAGTAACAACATTGGCAG+AGG 0.586147 5.1:+5591720 None:intergenic
AGCACCCTCCCTACAACACA+AGG 0.588695 5.1:-5591922 MS.gene21160:CDS
TAGTCCTTTGACTCAGATTG+CGG 0.589065 5.1:-5590720 MS.gene21160:CDS
AGACCGTCATTGATGCTGCT+GGG 0.589637 5.1:+5588466 None:intergenic
TGCTAAGTGGTATGTGTACA+AGG 0.589791 5.1:-5587911 MS.gene21160:CDS
AACACCAATGCGTTGTAAAG+GGG 0.591138 5.1:+5588353 None:intergenic
ACAGGTCCACAACCGGTGGT+TGG 0.591605 5.1:-5591855 MS.gene21160:CDS
TTGTGACTGGTCGAATGAAG+CGG 0.598343 5.1:+5588403 None:intergenic
AGAATGTTGTCATTTGAGCA+TGG 0.600950 5.1:+5588538 None:intergenic
ATGGAGAGGTTGACAACACT+CGG 0.600987 5.1:-5591799 MS.gene21160:CDS
ATTGCCCAAATGCATAGTAC+CGG 0.603355 5.1:+5591747 None:intergenic
ATACAAGATAACCAAGGTAG+AGG 0.606582 5.1:-5590836 MS.gene21160:CDS
TATATTTGGCTTGTGCTAAG+TGG 0.609309 5.1:-5587924 MS.gene21160:CDS
GTATTTAGCACTTTACATCA+CGG 0.617039 5.1:-5591020 MS.gene21160:CDS
TTGCGGATAATCTTGATCAA+GGG 0.620665 5.1:-5588002 MS.gene21160:CDS
GACTCTAGTGAACAATGTGA+CGG 0.622141 5.1:-5588043 MS.gene21160:CDS
ACTCTAGTGAACAATGTGAC+GGG 0.623386 5.1:-5588042 MS.gene21160:CDS
CGGATAATCTTGATCAAGGG+AGG 0.625811 5.1:-5587999 MS.gene21160:CDS
ATAGAGCAATGAAGAATCAG+AGG 0.625823 5.1:+5590655 None:intergenic
ACCACCGGTTGTGGACCTGT+CGG 0.626051 5.1:+5591858 None:intergenic
TCAGATGAGCAAGAAAAGAA+GGG 0.627345 5.1:-5590935 MS.gene21160:CDS
CCTCTACATTCCATGCATAG+GGG 0.630402 5.1:-5587843 None:intergenic
CAGCACTCATAGAAATGAAG+CGG 0.633945 5.1:-5588296 MS.gene21160:CDS
CCCCTATGCATGGAATGTAG+AGG 0.633977 5.1:+5587843 None:intergenic
GCCGACAGGTCCACAACCGG+TGG 0.637663 5.1:-5591859 MS.gene21160:CDS
GAATGAAAACTATGAGTACA+GGG 0.638544 5.1:-5588116 MS.gene21160:CDS
GACAGCTGCAAAGATGGCGA+TGG 0.645630 5.1:+5591445 None:intergenic
TAGAGCAATGAAGAATCAGA+GGG 0.646481 5.1:+5590656 None:intergenic
AATCCCAGCAGCATCAATGA+CGG 0.648376 5.1:-5588469 MS.gene21160:CDS
TGACGGGTCCAAATAAACCA+TGG 0.653922 5.1:-5588026 MS.gene21160:CDS
GCGGCCGCCATGATATTAGG+AGG 0.655145 5.1:-5591829 MS.gene21160:CDS
TATGCTAAGTGCTATAAATG+TGG 0.657537 5.1:-5587950 MS.gene21160:CDS
AAACAGTTTCTTAGACAAAG+CGG 0.657671 5.1:-5588700 MS.gene21160:intron
AGTATCACAAGCAACAACCA+TGG 0.663164 5.1:-5588514 MS.gene21160:CDS
TTGGGGTTACGGTATTTGTG+CGG 0.666939 5.1:-5590813 MS.gene21160:CDS
CAATAGACAGAGCATAAAGG+AGG 0.685001 5.1:+5591687 None:intergenic
TTCTCCTCCTAATATCATGG+CGG 0.687568 5.1:+5591825 None:intergenic
CCGGATGCATCTGATTACAA+GGG 0.700693 5.1:-5591889 MS.gene21160:CDS
CAAGGACAAGAGACTTGCTG+AGG 0.709240 5.1:-5587893 MS.gene21160:CDS
CAACCATGGACACTACTGAG+AGG 0.733442 5.1:+5588322 None:intergenic
GCACCCTCCCTACAACACAA+GGG 0.747611 5.1:-5591921 MS.gene21160:CDS
GTGTACATACAAGATAACCA+AGG 0.754045 5.1:-5590842 MS.gene21160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTCATTTATTTATTTAT+TGG - chr5.1:5589480-5589499 MS.gene21160:intron 10.0%
!! TTTATATAATAGTATAGTAT+TGG - chr5.1:5590215-5590234 MS.gene21160:intron 10.0%
!!! AATTGCAATTTTTTTTAATA+AGG + chr5.1:5590291-5590310 None:intergenic 10.0%
!!! ATTAAAAAAAATTGCAATTT+TGG - chr5.1:5590292-5590311 MS.gene21160:intron 10.0%
!!! TTTTGCAATTTTTTTTAATA+GGG - chr5.1:5590466-5590485 MS.gene21160:intron 10.0%
!! AAAAAATTCCTTTCTTATTA+TGG - chr5.1:5588163-5588182 MS.gene21160:CDS 15.0%
!! AATTAATTCATTAATCTTCA+AGG + chr5.1:5591035-5591054 None:intergenic 15.0%
!! AATTACCTTAAAGTATATTA+AGG - chr5.1:5590763-5590782 MS.gene21160:CDS 15.0%
!! ATAAAGACATTTATCATTAT+TGG - chr5.1:5590002-5590021 MS.gene21160:intron 15.0%
!! TAAAGACATTTATCATTATT+GGG - chr5.1:5590003-5590022 MS.gene21160:intron 15.0%
!!! CTTTTGCAATTTTTTTTAAT+AGG - chr5.1:5590465-5590484 MS.gene21160:intron 15.0%
!!! TAAACCTTTATAATTTGTTT+GGG + chr5.1:5589840-5589859 None:intergenic 15.0%
!!! TTTATTAATTTGTAATTCAG+TGG + chr5.1:5590896-5590915 None:intergenic 15.0%
!!! TTTGCAATTTTTTTTAATAG+GGG - chr5.1:5590467-5590486 MS.gene21160:intron 15.0%
!!! TTTTATTTGAAAACAAAAGT+TGG - chr5.1:5589657-5589676 MS.gene21160:intron 15.0%
!! AAAAAATTACTAAACTCACA+CGG - chr5.1:5591390-5591409 MS.gene21160:intron 20.0%
!! AAAACCAATCATAATTAATG+TGG + chr5.1:5588236-5588255 None:intergenic 20.0%
!! AAAATAGTACTAGAAAACAA+TGG + chr5.1:5588394-5588413 None:intergenic 20.0%
!! AAGAAGTTAAAATGGTAATA+AGG - chr5.1:5591169-5591188 MS.gene21160:intron 20.0%
!! AAGTTTCAAAAATCTAACTA+AGG - chr5.1:5590664-5590683 MS.gene21160:CDS 20.0%
!! AATATCAAAGAACTAAACAA+GGG + chr5.1:5588599-5588618 None:intergenic 20.0%
!! AATCTCCTTAATATACTTTA+AGG + chr5.1:5590771-5590790 None:intergenic 20.0%
!! AATGTTGTTACTAATTTCTT+AGG - chr5.1:5588059-5588078 MS.gene21160:CDS 20.0%
!! AATTCCCAAACAAATTATAA+AGG - chr5.1:5589833-5589852 MS.gene21160:intron 20.0%
!! ACGAATGTATGTTTATATTA+GGG - chr5.1:5588620-5588639 MS.gene21160:CDS 20.0%
!! AGAATGAATAGAAAATTTAC+CGG + chr5.1:5589210-5589229 None:intergenic 20.0%
!! ATGTAGAAAGAACAAATTAT+TGG - chr5.1:5590035-5590054 MS.gene21160:intron 20.0%
!! CATTAACTAAAAACAAAGAA+AGG + chr5.1:5590705-5590724 None:intergenic 20.0%
!! TAAGAAATTAGTAACAACAT+TGG + chr5.1:5588060-5588079 None:intergenic 20.0%
!! TGTAGAAAGAACAAATTATT+GGG - chr5.1:5590036-5590055 MS.gene21160:intron 20.0%
!!! CTAAACCTTTATAATTTGTT+TGG + chr5.1:5589841-5589860 None:intergenic 20.0%
!!! GTAACATTTTAAAACTTAGA+GGG + chr5.1:5590258-5590277 None:intergenic 20.0%
!!! GTTTTAAAATGTTACGATTT+TGG - chr5.1:5590263-5590282 MS.gene21160:intron 20.0%
!!! TTAGTTTTCCATAATAAGAA+AGG + chr5.1:5588174-5588193 None:intergenic 20.0%
!!! TTATAATTTGTTTGGGAATT+GGG + chr5.1:5589833-5589852 None:intergenic 20.0%
!!! TTGCAATTTTTTTTAATAGG+GGG - chr5.1:5590468-5590487 MS.gene21160:intron 20.0%
!!! TTTAGTAATTTTTTTGTGAC+TGG + chr5.1:5591384-5591403 None:intergenic 20.0%
!!! TTTATAATTTGTTTGGGAAT+TGG + chr5.1:5589834-5589853 None:intergenic 20.0%
!!! TTTTTGAGGATTTAATTCAA+AGG + chr5.1:5588566-5588585 None:intergenic 20.0%
! AACATATTTCTCTAAACATG+GGG - chr5.1:5590437-5590456 MS.gene21160:intron 25.0%
! AGAACATATTTCTCTAAACA+TGG - chr5.1:5590435-5590454 MS.gene21160:intron 25.0%
! ATAAACCACACATTATTAGT+TGG + chr5.1:5590173-5590192 None:intergenic 25.0%
! ATATCTGTCAAACAAAGAAT+GGG + chr5.1:5588302-5588321 None:intergenic 25.0%
! ATTAAGCTACTTAAACTAAG+AGG + chr5.1:5589350-5589369 None:intergenic 25.0%
! ATTAAGGAGATTGATTGAAA+GGG - chr5.1:5590779-5590798 MS.gene21160:CDS 25.0%
! CAATATCAAAGAACTAAACA+AGG + chr5.1:5588600-5588619 None:intergenic 25.0%
! GAACATATTTCTCTAAACAT+GGG - chr5.1:5590436-5590455 MS.gene21160:intron 25.0%
! GACGAATGTATGTTTATATT+AGG - chr5.1:5588619-5588638 MS.gene21160:CDS 25.0%
! GTAAAAGCAATAATTTCGAA+AGG + chr5.1:5590619-5590638 None:intergenic 25.0%
! TAATTGTCCCATATACATAA+AGG + chr5.1:5591607-5591626 None:intergenic 25.0%
! TATTAAGGAGATTGATTGAA+AGG - chr5.1:5590778-5590797 MS.gene21160:CDS 25.0%
! TCTTTATTGTTAGTTGCATA+CGG + chr5.1:5589989-5590008 None:intergenic 25.0%
! TGACTCAAAATTGAATAGTT+TGG - chr5.1:5589612-5589631 MS.gene21160:intron 25.0%
! TGATCCACATTAATTATGAT+TGG - chr5.1:5588229-5588248 MS.gene21160:CDS 25.0%
! TTCTCTCAAAAAATAATGTG+TGG - chr5.1:5590192-5590211 MS.gene21160:intron 25.0%
! TTTACAAAAAGTTGCGATTA+TGG + chr5.1:5590370-5590389 None:intergenic 25.0%
!! AGGGTATGATTAAATTTTTG+AGG + chr5.1:5588580-5588599 None:intergenic 25.0%
!! GTTTCAAAATGTTGCAATTT+TGG + chr5.1:5590494-5590513 None:intergenic 25.0%
!! TGACATAGTTGATATATTTG+TGG - chr5.1:5589585-5589604 MS.gene21160:intron 25.0%
!!! ATTGCAACATTTTGAAACTT+AGG - chr5.1:5590496-5590515 MS.gene21160:intron 25.0%
!!! CGTAACATTTTAAAACTTAG+AGG + chr5.1:5590259-5590278 None:intergenic 25.0%
!!! CTATGATTTTTATTGGCTAT+TGG - chr5.1:5591797-5591816 MS.gene21160:CDS 25.0%
!!! GTATGATTAAATTTTTCAGC+TGG - chr5.1:5588858-5588877 MS.gene21160:intron 25.0%
!!! TATAATTTGTTTGGGAATTG+GGG + chr5.1:5589832-5589851 None:intergenic 25.0%
!!! TCTATTTTTTCGTAAGCATA+GGG - chr5.1:5588882-5588901 MS.gene21160:intron 25.0%
!!! TTCTATTTTTTCGTAAGCAT+AGG - chr5.1:5588881-5588900 MS.gene21160:intron 25.0%
!!! TTGCAACATTTTGAAACTTA+GGG - chr5.1:5590497-5590516 MS.gene21160:intron 25.0%
AAACAGTTTCTTAGACAAAG+CGG - chr5.1:5591071-5591090 MS.gene21160:CDS 30.0%
AAAGAAAAGAGAGGAGAAAA+TGG + chr5.1:5589806-5589825 None:intergenic 30.0%
AAAGTTTCTCTTCCAATGAA+TGG - chr5.1:5589372-5589391 MS.gene21160:intron 30.0%
AAATGACAACTGGGTTATTA+AGG - chr5.1:5590085-5590104 MS.gene21160:intron 30.0%
AATAAGGATGTTACCCATAT+GGG - chr5.1:5591185-5591204 MS.gene21160:intron 30.0%
ACATATTTCTCTAAACATGG+GGG - chr5.1:5590438-5590457 MS.gene21160:intron 30.0%
ACTCAAATTGTTCCATTCAT+TGG + chr5.1:5589387-5589406 None:intergenic 30.0%
AGAAACCAACTAATAATGTG+TGG - chr5.1:5590165-5590184 MS.gene21160:intron 30.0%
AGATGTGGAAGAAGTTAAAA+TGG - chr5.1:5591161-5591180 MS.gene21160:intron 30.0%
ATATACTGTATATGTCAAGG+AGG - chr5.1:5589897-5589916 MS.gene21160:intron 30.0%
ATCTGAATCGTCAAATTGAT+CGG + chr5.1:5588822-5588841 None:intergenic 30.0%
CAAGTATGTGACCAAATTAA+CGG + chr5.1:5588003-5588022 None:intergenic 30.0%
CATATTTCCCTTATGTTAGA+GGG - chr5.1:5590407-5590426 MS.gene21160:intron 30.0%
CGATACGCAAAAAATACTAT+AGG + chr5.1:5590541-5590560 None:intergenic 30.0%
GAATGAAAACTATGAGTACA+GGG - chr5.1:5591655-5591674 MS.gene21160:CDS 30.0%
GAGATTATCTTACAATTGCT+TGG + chr5.1:5588351-5588370 None:intergenic 30.0%
GATATCTGTCAAACAAAGAA+TGG + chr5.1:5588303-5588322 None:intergenic 30.0%
GATATCTTGCAAATCTCAAA+AGG + chr5.1:5590582-5590601 None:intergenic 30.0%
GGAATATACTGTATATGTCA+AGG - chr5.1:5589894-5589913 MS.gene21160:intron 30.0%
GTATAGACAATCTTCTCTAA+TGG + chr5.1:5589556-5589575 None:intergenic 30.0%
GTATTTAGCACTTTACATCA+CGG - chr5.1:5588751-5588770 MS.gene21160:intron 30.0%
TAATAAGGATGTTACCCATA+TGG - chr5.1:5591184-5591203 MS.gene21160:intron 30.0%
TATACTGTATATGTCAAGGA+GGG - chr5.1:5589898-5589917 MS.gene21160:intron 30.0%
TATGCTAAGTGCTATAAATG+TGG - chr5.1:5591821-5591840 MS.gene21160:CDS 30.0%
TCTTCAAGGTAATAACAAAG+AGG + chr5.1:5591021-5591040 None:intergenic 30.0%
TTGAAAGGGTCAATAAACTT+CGG - chr5.1:5590793-5590812 MS.gene21160:CDS 30.0%
TTGCTATGTTTATGTCTTGT+TGG - chr5.1:5589320-5589339 MS.gene21160:intron 30.0%
TTGTTCTTTCTACATCAAGT+GGG + chr5.1:5590030-5590049 None:intergenic 30.0%
TTTGTTCTTTCTACATCAAG+TGG + chr5.1:5590031-5590050 None:intergenic 30.0%
! ATGGATTGTCCAAAACATTA+TGG + chr5.1:5591217-5591236 None:intergenic 30.0%
! CAACTTTTTGTAAAGATGTG+AGG - chr5.1:5590376-5590395 MS.gene21160:intron 30.0%
! CATAAGGGAAATATGCTTTT+TGG + chr5.1:5590402-5590421 None:intergenic 30.0%
! CTCATAGTTTTCATTCCTTT+AGG + chr5.1:5591651-5591670 None:intergenic 30.0%
! TGCCACAATTTTTCTTTGTT+GGG - chr5.1:5591571-5591590 MS.gene21160:intron 30.0%
! TTAGAGTCTTCTTTGCATTT+TGG + chr5.1:5588692-5588711 None:intergenic 30.0%
! TTTCTAAGAGAATGTCCTAA+AGG - chr5.1:5591633-5591652 MS.gene21160:intron 30.0%
! TTTCTTGCTGATACTTTTCT+AGG - chr5.1:5588113-5588132 MS.gene21160:CDS 30.0%
!!! AGGTAATTTTGATTGATGAG+AGG + chr5.1:5590751-5590770 None:intergenic 30.0%
AAAAGAGAGGAGAAAATGGA+AGG + chr5.1:5589802-5589821 None:intergenic 35.0%
AAAGAGAGGAGAAAATGGAA+GGG + chr5.1:5589801-5589820 None:intergenic 35.0%
AACTTCTTCCACATCTGTTA+AGG + chr5.1:5591157-5591176 None:intergenic 35.0%
AATTTGGTCACATACTTGAC+CGG - chr5.1:5588005-5588024 MS.gene21160:CDS 35.0%
ATACAAGATAACCAAGGTAG+AGG - chr5.1:5588935-5588954 MS.gene21160:intron 35.0%
ATACTGTATATGTCAAGGAG+GGG - chr5.1:5589899-5589918 MS.gene21160:intron 35.0%
ATAGAGCAATGAAGAATCAG+AGG + chr5.1:5589119-5589138 None:intergenic 35.0%
ATATGCATATTGCTCCTCTT+TGG - chr5.1:5590972-5590991 MS.gene21160:CDS 35.0%
ATGGCCCACTATTAAATATG+TGG + chr5.1:5590064-5590083 None:intergenic 35.0%
ATTAAGTCTCAGAAATCACG+AGG + chr5.1:5588263-5588282 None:intergenic 35.0%
ATTAGTAACAACATTGGCAG+AGG + chr5.1:5588054-5588073 None:intergenic 35.0%
ATTGCGGATAATCTTGATCA+AGG - chr5.1:5591768-5591787 MS.gene21160:CDS 35.0%
CAATCACAATCAAGGAGAAA+TGG - chr5.1:5591121-5591140 MS.gene21160:CDS 35.0%
CATATTAAGCAACACCAAAG+AGG + chr5.1:5590989-5591008 None:intergenic 35.0%
CATATTTCTCTAAACATGGG+GGG - chr5.1:5590439-5590458 MS.gene21160:intron 35.0%
GACCCAACAAAGAAAAATTG+TGG + chr5.1:5591576-5591595 None:intergenic 35.0%
GATCATTTGCTCCTTAATCA+TGG - chr5.1:5590107-5590126 MS.gene21160:intron 35.0%
GCATATTTCCCTTATGTTAG+AGG - chr5.1:5590406-5590425 MS.gene21160:intron 35.0%
GGAATGAAAACTATGAGTAC+AGG - chr5.1:5591654-5591673 MS.gene21160:intron 35.0%
GTGTACATACAAGATAACCA+AGG - chr5.1:5588929-5588948 MS.gene21160:intron 35.0%
TAGAGCAATGAAGAATCAGA+GGG + chr5.1:5589118-5589137 None:intergenic 35.0%
TATCTCTACCTTAACAGATG+TGG - chr5.1:5591146-5591165 MS.gene21160:intron 35.0%
TCAATGACGGTCTTCTTAAT+CGG - chr5.1:5591315-5591334 MS.gene21160:intron 35.0%
TCAGATGAGCAAGAAAAGAA+GGG - chr5.1:5588836-5588855 MS.gene21160:intron 35.0%
TCCTTTATGCTCTGTCTATT+GGG - chr5.1:5588086-5588105 MS.gene21160:CDS 35.0%
TGGTTTCCAATCATGAAGAT+CGG + chr5.1:5589536-5589555 None:intergenic 35.0%
TGTCCAAAACATTATGGTTG+TGG + chr5.1:5591211-5591230 None:intergenic 35.0%
TGTTCTTTCTACATCAAGTG+GGG + chr5.1:5590029-5590048 None:intergenic 35.0%
TTCAGATGAGCAAGAAAAGA+AGG - chr5.1:5588835-5588854 MS.gene21160:intron 35.0%
TTCTTCATTGCTCTATGAAG+AGG - chr5.1:5589123-5589142 MS.gene21160:intron 35.0%
TTGCGGATAATCTTGATCAA+GGG - chr5.1:5591769-5591788 MS.gene21160:CDS 35.0%
! AGAATGTTGTCATTTGAGCA+TGG + chr5.1:5591236-5591255 None:intergenic 35.0%
! ATAACCCAGTTGTCATTTCA+TGG + chr5.1:5590083-5590102 None:intergenic 35.0%
! CAATTTTTCTTTGTTGGGTC+TGG - chr5.1:5591576-5591595 MS.gene21160:intron 35.0%
! CTTTTGACCCTCTAACATAA+GGG + chr5.1:5590417-5590436 None:intergenic 35.0%
! GGAGGCTCTATGATTTTTAT+TGG - chr5.1:5591790-5591809 MS.gene21160:CDS 35.0%
! GGTGCCACATATTTAATAGT+GGG - chr5.1:5590057-5590076 MS.gene21160:intron 35.0%
! GTCAAAAAAGAAGTATGCCT+TGG - chr5.1:5590724-5590743 MS.gene21160:CDS 35.0%
! GTGCCACAATTTTTCTTTGT+TGG - chr5.1:5591570-5591589 MS.gene21160:intron 35.0%
! TCCAAATAAACCATGGATTG+CGG - chr5.1:5591752-5591771 MS.gene21160:CDS 35.0%
! TCTTTTGACCCTCTAACATA+AGG + chr5.1:5590418-5590437 None:intergenic 35.0%
! TGGTCTAAAATCTAGTGTCT+CGG - chr5.1:5588787-5588806 MS.gene21160:intron 35.0%
!! TATATTTGGCTTGTGCTAAG+TGG - chr5.1:5591847-5591866 MS.gene21160:CDS 35.0%
!! TTGCTGATACTTTTCTAGGA+AGG - chr5.1:5588117-5588136 MS.gene21160:CDS 35.0%
!!! GTATTTTTTGCGTATCGCTT+TGG - chr5.1:5590544-5590563 MS.gene21160:intron 35.0%
!!! TCAACAATTTTGGGACGAAA+GGG + chr5.1:5590319-5590338 None:intergenic 35.0%
!!! TGGTTTTGTAAACGATCCAA+CGG - chr5.1:5591518-5591537 MS.gene21160:intron 35.0%
AACACCAATGCGTTGTAAAG+GGG + chr5.1:5591421-5591440 None:intergenic 40.0%
AAGATAACCAAGGTAGAGGT+TGG - chr5.1:5588939-5588958 MS.gene21160:intron 40.0%
AAGGTAAGAGAAGGAAAAGG+TGG + chr5.1:5589773-5589792 None:intergenic 40.0%
AATGAAACTCCCATGCATCT+TGG + chr5.1:5589946-5589965 None:intergenic 40.0%
ACCAACCAAAACACACTCAA+TGG + chr5.1:5591552-5591571 None:intergenic 40.0%
ACCCAATAGACAGAGCATAA+AGG + chr5.1:5588090-5588109 None:intergenic 40.0%
ACTCTAGTGAACAATGTGAC+GGG - chr5.1:5591729-5591748 MS.gene21160:CDS 40.0%
AGATAACCAAGGTAGAGGTT+GGG - chr5.1:5588940-5588959 MS.gene21160:intron 40.0%
AGCAGACAGTAAGCAACTAT+TGG - chr5.1:5588724-5588743 MS.gene21160:intron 40.0%
AGTATCACAAGCAACAACCA+TGG - chr5.1:5591257-5591276 MS.gene21160:intron 40.0%
ATTATGGTTGTGGCCCATAT+GGG + chr5.1:5591201-5591220 None:intergenic 40.0%
ATTGCCCAAATGCATAGTAC+CGG + chr5.1:5588027-5588046 None:intergenic 40.0%
CAACACCAATGCGTTGTAAA+GGG + chr5.1:5591422-5591441 None:intergenic 40.0%
CAATAGACAGAGCATAAAGG+AGG + chr5.1:5588087-5588106 None:intergenic 40.0%
CACTTCTCCTCCTAATATCA+TGG + chr5.1:5587952-5587971 None:intergenic 40.0%
CAGCACTCATAGAAATGAAG+CGG - chr5.1:5591475-5591494 MS.gene21160:intron 40.0%
CTCCTTTATGCTCTGTCTAT+TGG - chr5.1:5588085-5588104 MS.gene21160:CDS 40.0%
GACTCTAGTGAACAATGTGA+CGG - chr5.1:5591728-5591747 MS.gene21160:CDS 40.0%
GATATTAGGAGGAGAAGTGA+TGG - chr5.1:5587953-5587972 MS.gene21160:CDS 40.0%
GGAGAGGCCTTTATGTATAT+GGG - chr5.1:5591597-5591616 MS.gene21160:intron 40.0%
GGTTTCCAATCATGAAGATC+GGG + chr5.1:5589535-5589554 None:intergenic 40.0%
GTCAACACAAAGTGATAGAG+TGG - chr5.1:5589873-5589892 MS.gene21160:intron 40.0%
TACCAACAAGTTGCTTGATC+CGG + chr5.1:5589033-5589052 None:intergenic 40.0%
TAGTCCTTTGACTCAGATTG+CGG - chr5.1:5589051-5589070 MS.gene21160:intron 40.0%
TCAAGATTATCCGCAATCCA+TGG + chr5.1:5591765-5591784 None:intergenic 40.0%
TCAATCCCGATCTTCATGAT+TGG - chr5.1:5589527-5589546 MS.gene21160:intron 40.0%
TCCGCAATCCATGGTTTATT+TGG + chr5.1:5591756-5591775 None:intergenic 40.0%
TCGAAAGGAGATAGACTAGA+TGG + chr5.1:5590604-5590623 None:intergenic 40.0%
TCTTGAGCACACTCTCAATA+GGG - chr5.1:5591682-5591701 MS.gene21160:CDS 40.0%
TGCTAAGTGGTATGTGTACA+AGG - chr5.1:5591860-5591879 MS.gene21160:CDS 40.0%
TGGAGAGGCCTTTATGTATA+TGG - chr5.1:5591596-5591615 MS.gene21160:intron 40.0%
TGGAGTTGTCACCATGATTA+AGG + chr5.1:5590121-5590140 None:intergenic 40.0%
TGTTCCAATGTGACAATCCA+TGG + chr5.1:5591277-5591296 None:intergenic 40.0%
TTAACTATTAAGCTCGTGCG+TGG + chr5.1:5590141-5590160 None:intergenic 40.0%
TTAGACAAAGCGGCAATCAA+AGG - chr5.1:5591081-5591100 MS.gene21160:CDS 40.0%
TTCTCCTCCTAATATCATGG+CGG + chr5.1:5587949-5587968 None:intergenic 40.0%
TTCTTGAGCACACTCTCAAT+AGG - chr5.1:5591681-5591700 MS.gene21160:CDS 40.0%
TTGAAATTCGCACGATCACA+TGG - chr5.1:5591498-5591517 MS.gene21160:intron 40.0%
TTGACCGGTACTATGCATTT+GGG - chr5.1:5588020-5588039 MS.gene21160:CDS 40.0%
TTGGGGAGTAAAGAAAAGAG+AGG + chr5.1:5589815-5589834 None:intergenic 40.0%
TTTATGCTCTGTCTATTGGG+TGG - chr5.1:5588089-5588108 MS.gene21160:CDS 40.0%
TTTCGTAAGCATAGGGTCTT+TGG - chr5.1:5588889-5588908 MS.gene21160:intron 40.0%
TTTGATTGATGAGAGGTCCA+AGG + chr5.1:5590744-5590763 None:intergenic 40.0%
! ACAACCATGGATTGTCACAT+TGG - chr5.1:5591270-5591289 MS.gene21160:intron 40.0%
! ACAGTTTTCCCTTGTGTTGT+AGG + chr5.1:5587861-5587880 None:intergenic 40.0%
! AGATGCCATTGAGTGTGTTT+TGG - chr5.1:5591544-5591563 MS.gene21160:intron 40.0%
! ATCCTTTGCTTCTTGGTCTT+AGG + chr5.1:5589169-5589188 None:intergenic 40.0%
! CAGTTTTCCCTTGTGTTGTA+GGG + chr5.1:5587860-5587879 None:intergenic 40.0%
! GACACTAGATTTTAGACCAC+CGG + chr5.1:5588786-5588805 None:intergenic 40.0%
! GAGTCTTCTTTGCATTTTGG+TGG + chr5.1:5588689-5588708 None:intergenic 40.0%
! GCAATCAAAGGCATAGAAAG+TGG - chr5.1:5591093-5591112 MS.gene21160:CDS 40.0%
! GGCGTCTTCTCAACAATTTT+GGG + chr5.1:5590328-5590347 None:intergenic 40.0%
! GGGTGCCACATATTTAATAG+TGG - chr5.1:5590056-5590075 MS.gene21160:intron 40.0%
! GGTCTAAAATCTAGTGTCTC+GGG - chr5.1:5588788-5588807 MS.gene21160:intron 40.0%
! TGGCGTCTTCTCAACAATTT+TGG + chr5.1:5590329-5590348 None:intergenic 40.0%
! TGGTCTTAGGTGTTTCACAT+AGG + chr5.1:5589156-5589175 None:intergenic 40.0%
!! CATTTTGGTGGATGTAAGCT+TGG + chr5.1:5588677-5588696 None:intergenic 40.0%
!!! CAACAATTTTGGGACGAAAG+GGG + chr5.1:5590318-5590337 None:intergenic 40.0%
!!! CTCAACAATTTTGGGACGAA+AGG + chr5.1:5590320-5590339 None:intergenic 40.0%
!!! GCGATTATGGTCCCTTTTTT+GGG + chr5.1:5590357-5590376 None:intergenic 40.0%
!!! TGCGATTATGGTCCCTTTTT+TGG + chr5.1:5590358-5590377 None:intergenic 40.0%
AAATCTAGTGTCTCGGGCTT+TGG - chr5.1:5588794-5588813 MS.gene21160:intron 45.0%
AACACAAGGGAAAACTGTCC+CGG - chr5.1:5587863-5587882 MS.gene21160:CDS 45.0%
AATCCCAGCAGCATCAATGA+CGG - chr5.1:5591302-5591321 MS.gene21160:intron 45.0%
AGAAAATGGAAGGGATGGGA+AGG + chr5.1:5589792-5589811 None:intergenic 45.0%
AGAGGAGAAAATGGAAGGGA+TGG + chr5.1:5589797-5589816 None:intergenic 45.0%
AGTTGCATACGGCTCTCAAT+TGG + chr5.1:5589978-5589997 None:intergenic 45.0%
ATGCATCTGATTACAAGGGC+CGG - chr5.1:5587886-5587905 MS.gene21160:CDS 45.0%
ATGGAGAGGTTGACAACACT+CGG - chr5.1:5587972-5587991 MS.gene21160:CDS 45.0%
ATGTGGCATCCTTTGCTTCT+TGG + chr5.1:5589176-5589195 None:intergenic 45.0%
CACCTAAGACCAAGAAGCAA+AGG - chr5.1:5589164-5589183 MS.gene21160:intron 45.0%
CATTATGGTTGTGGCCCATA+TGG + chr5.1:5591202-5591221 None:intergenic 45.0%
CCAACACCAATGCGTTGTAA+AGG + chr5.1:5591423-5591442 None:intergenic 45.0%
CCCTTGTAATCAGATGCATC+CGG + chr5.1:5587885-5587904 None:intergenic 45.0%
CCGGATGCATCTGATTACAA+GGG - chr5.1:5587882-5587901 MS.gene21160:CDS 45.0%
CCTTGTAATCAGATGCATCC+GGG + chr5.1:5587884-5587903 None:intergenic 45.0%
CGGATAATCTTGATCAAGGG+AGG - chr5.1:5591772-5591791 MS.gene21160:CDS 45.0%
CTTGACCGGTACTATGCATT+TGG - chr5.1:5588019-5588038 MS.gene21160:CDS 45.0%
GAGGAGAAAATGGAAGGGAT+GGG + chr5.1:5589796-5589815 None:intergenic 45.0%
GATAACCAAGGTAGAGGTTG+GGG - chr5.1:5588941-5588960 MS.gene21160:intron 45.0%
GGCAGGATCAACATCGAATA+GGG + chr5.1:5589925-5589944 None:intergenic 45.0%
GGGAAGGTAAGAGAAGGAAA+AGG + chr5.1:5589776-5589795 None:intergenic 45.0%
GGTCGTAGAAAGGAACAGTT+AGG + chr5.1:5591350-5591369 None:intergenic 45.0%
TACCGGATCAAGCAACTTGT+TGG - chr5.1:5589028-5589047 MS.gene21160:intron 45.0%
TATTTGTGCGGTCGCAATTG+TGG - chr5.1:5588970-5588989 MS.gene21160:intron 45.0%
TGCCACATAGCAAACAGTTC+CGG - chr5.1:5589188-5589207 MS.gene21160:intron 45.0%
TGGCAGGATCAACATCGAAT+AGG + chr5.1:5589926-5589945 None:intergenic 45.0%
TGGCAGTGCAATCACAATCA+AGG - chr5.1:5591113-5591132 MS.gene21160:CDS 45.0%
TGGGCCATGAAATGACAACT+GGG - chr5.1:5590076-5590095 MS.gene21160:intron 45.0%
TTCACCCCTTTACAACGCAT+TGG - chr5.1:5591414-5591433 MS.gene21160:intron 45.0%
TTGATCCTGCCAAGATGCAT+GGG - chr5.1:5589934-5589953 MS.gene21160:intron 45.0%
TTGGGGTTACGGTATTTGTG+CGG - chr5.1:5588958-5588977 MS.gene21160:intron 45.0%
TTTCCCTTGTGTTGTAGGGA+GGG + chr5.1:5587856-5587875 None:intergenic 45.0%
TTTCTTTGTTGGGTCTGGAG+AGG - chr5.1:5591581-5591600 MS.gene21160:intron 45.0%
! CCTTTACAACGCATTGGTGT+TGG - chr5.1:5591420-5591439 MS.gene21160:intron 45.0%
! GGGCCACAACCATAATGTTT+TGG - chr5.1:5591205-5591224 MS.gene21160:intron 45.0%
! TGACGGGTCCAAATAAACCA+TGG - chr5.1:5591745-5591764 MS.gene21160:CDS 45.0%
! TTGTGACTGGTCGAATGAAG+CGG + chr5.1:5591371-5591390 None:intergenic 45.0%
! TTTTCCCTTGTGTTGTAGGG+AGG + chr5.1:5587857-5587876 None:intergenic 45.0%
!! TACCGGAACTGTTTGCTATG+TGG + chr5.1:5589193-5589212 None:intergenic 45.0%
!!! GCCATTGAGTGTGTTTTGGT+TGG - chr5.1:5591548-5591567 MS.gene21160:intron 45.0%
!!! GCGCTTCTTGTTTTCTTGTC+CGG - chr5.1:5588995-5589014 MS.gene21160:intron 45.0%
!!! TTTTTAACATAATATAATTT+CGG - chr5.1:5589736-5589755 MS.gene21160:intron 5.0%
AAACTCCCATGCATCTTGGC+AGG + chr5.1:5589942-5589961 None:intergenic 50.0%
AAGACCGTCATTGATGCTGC+TGG + chr5.1:5591309-5591328 None:intergenic 50.0%
AAGCATAGGGTCTTTGGCAG+CGG - chr5.1:5588895-5588914 MS.gene21160:intron 50.0%
ACGACCGCAATCTGAGTCAA+AGG + chr5.1:5589058-5589077 None:intergenic 50.0%
ACGCCACGTGTCCCAAAAAA+GGG - chr5.1:5590343-5590362 MS.gene21160:intron 50.0%
ACTCGGCATCGCCGTTAATT+TGG - chr5.1:5587989-5588008 MS.gene21160:CDS 50.0%
AGACCGTCATTGATGCTGCT+GGG + chr5.1:5591308-5591327 None:intergenic 50.0%
AGGGATGGGAAGGTAAGAGA+AGG + chr5.1:5589782-5589801 None:intergenic 50.0%
AGTCCTCTCAGTAGTGTCCA+TGG - chr5.1:5591446-5591465 MS.gene21160:CDS 50.0%
CAACCATGGACACTACTGAG+AGG + chr5.1:5591452-5591471 None:intergenic 50.0%
CAAGGTAGAGGTTGGGGTTA+CGG - chr5.1:5588947-5588966 MS.gene21160:intron 50.0%
CCCGGATGCATCTGATTACA+AGG - chr5.1:5587881-5587900 MS.gene21160:CDS 50.0%
CGAATGAAGCGGTCGTAGAA+AGG + chr5.1:5591360-5591379 None:intergenic 50.0%
CTCAATGGCATCTTTGCCGT+TGG + chr5.1:5591537-5591556 None:intergenic 50.0%
CTCAGTAGTGTCCATGGTTG+CGG - chr5.1:5591452-5591471 MS.gene21160:CDS 50.0%
GTGGGCCATGAAATGACAAC+TGG - chr5.1:5590075-5590094 MS.gene21160:intron 50.0%
GTTGATCCTGCCAAGATGCA+TGG - chr5.1:5589933-5589952 MS.gene21160:intron 50.0%
GTTGCTTGATCCGGTACTTG+CGG + chr5.1:5589024-5589043 None:intergenic 50.0%
TCAGATTGCGGTCGTGTTTG+TGG - chr5.1:5589063-5589082 MS.gene21160:intron 50.0%
TGCTTGGACAGCTGCAAAGA+TGG + chr5.1:5588335-5588354 None:intergenic 50.0%
TTGCTTGATCCGGTACTTGC+GGG + chr5.1:5589023-5589042 None:intergenic 50.0%
! TAGGAGGAGAAGTGATGGAG+AGG - chr5.1:5587958-5587977 MS.gene21160:CDS 50.0%
!! CAAGGACAAGAGACTTGCTG+AGG - chr5.1:5591878-5591897 MS.gene21160:CDS 50.0%
AGCACCCTCCCTACAACACA+AGG - chr5.1:5587849-5587868 MS.gene21160:CDS 55.0%
ATCTGATTACAAGGGCCGGC+CGG - chr5.1:5587890-5587909 MS.gene21160:CDS 55.0%
CGTAACCCCAACCTCTACCT+TGG + chr5.1:5588949-5588968 None:intergenic 55.0%
GACAGCTGCAAAGATGGCGA+TGG + chr5.1:5588329-5588348 None:intergenic 55.0%
GACGCCACGTGTCCCAAAAA+AGG - chr5.1:5590342-5590361 MS.gene21160:intron 55.0%
GCACCCTCCCTACAACACAA+GGG - chr5.1:5587850-5587869 MS.gene21160:CDS 55.0%
GCACTTTACATCACGGCCCT+CGG - chr5.1:5588758-5588777 MS.gene21160:intron 55.0%
TCCTAATATCATGGCGGCCG+CGG + chr5.1:5587943-5587962 None:intergenic 55.0%
TCGTGTTTGTGGCTGCTTGG+AGG - chr5.1:5589074-5589093 MS.gene21160:intron 55.0%
TGCTGAGGCGGGCATAGAAT+TGG - chr5.1:5591893-5591912 MS.gene21160:CDS 55.0%
! TATGAGTGCTGCCGCAACCA+TGG + chr5.1:5591466-5591485 None:intergenic 55.0%
!! ATTTTAGACCACCGGTGCCG+AGG + chr5.1:5588778-5588797 None:intergenic 55.0%
!! GACAAGAGACTTGCTGAGGC+GGG - chr5.1:5591882-5591901 MS.gene21160:CDS 55.0%
!! GGACAAGAGACTTGCTGAGG+CGG - chr5.1:5591881-5591900 MS.gene21160:CDS 55.0%
!! TTTTAGACCACCGGTGCCGA+GGG + chr5.1:5588777-5588796 None:intergenic 55.0%
!!! GGTCCCTTTTTTGGGACACG+TGG + chr5.1:5590349-5590368 None:intergenic 55.0%
ACAGGTCCACAACCGGTGGT+TGG - chr5.1:5587916-5587935 MS.gene21160:CDS 60.0%
CGGTCGTGTTTGTGGCTGCT+TGG - chr5.1:5589071-5589090 MS.gene21160:intron 60.0%
GATCCGGTACTTGCGGGTAC+CGG + chr5.1:5589017-5589036 None:intergenic 60.0%
GCGGCCGCCATGATATTAGG+AGG - chr5.1:5587942-5587961 MS.gene21160:CDS 60.0%
TCCGCGGCCGCCATGATATT+AGG - chr5.1:5587939-5587958 MS.gene21160:CDS 60.0%
TGTCCGGTACCCGCAAGTAC+CGG - chr5.1:5589011-5589030 MS.gene21160:intron 60.0%
! ACCACCGGTTGTGGACCTGT+CGG + chr5.1:5587916-5587935 None:intergenic 60.0%
TACATCACGGCCCTCGGCAC+CGG - chr5.1:5588764-5588783 MS.gene21160:intron 65.0%
! CACAACCGGTGGTTGGTCCG+CGG - chr5.1:5587923-5587942 MS.gene21160:CDS 65.0%
CCGGCCGACAGGTCCACAAC+CGG - chr5.1:5587909-5587928 MS.gene21160:CDS 70.0%
CCGGTTGTGGACCTGTCGGC+CGG + chr5.1:5587912-5587931 None:intergenic 70.0%
GCCGACAGGTCCACAACCGG+TGG - chr5.1:5587912-5587931 MS.gene21160:CDS 70.0%
TTGTGGACCTGTCGGCCGGC+CGG + chr5.1:5587908-5587927 None:intergenic 70.0%
! CGCGGACCAACCACCGGTTG+TGG + chr5.1:5587925-5587944 None:intergenic 70.0%
! ATCACGGCCCTCGGCACCGG+TGG - chr5.1:5588767-5588786 MS.gene21160:intron 75.0%
! ACAAGGGCCGGCCGGCCGAC+AGG - chr5.1:5587898-5587917 MS.gene21160:CDS 80.0%
! GGCGGCCGCGGACCAACCAC+CGG + chr5.1:5587931-5587950 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 5587846 5591947 5587846 ID=MS.gene21160
chr5.1 mRNA 5587846 5591947 5587846 ID=MS.gene21160.t1;Parent=MS.gene21160
chr5.1 exon 5591655 5591947 5591655 ID=MS.gene21160.t1.exon1;Parent=MS.gene21160.t1
chr5.1 CDS 5591655 5591947 5591655 ID=cds.MS.gene21160.t1;Parent=MS.gene21160.t1
chr5.1 exon 5591436 5591475 5591436 ID=MS.gene21160.t1.exon2;Parent=MS.gene21160.t1
chr5.1 CDS 5591436 5591475 5591436 ID=cds.MS.gene21160.t1;Parent=MS.gene21160.t1
chr5.1 exon 5590584 5591152 5590584 ID=MS.gene21160.t1.exon3;Parent=MS.gene21160.t1
chr5.1 CDS 5590584 5591152 5590584 ID=cds.MS.gene21160.t1;Parent=MS.gene21160.t1
chr5.1 exon 5587846 5588716 5587846 ID=MS.gene21160.t1.exon4;Parent=MS.gene21160.t1
chr5.1 CDS 5587846 5588716 5587846 ID=cds.MS.gene21160.t1;Parent=MS.gene21160.t1
Gene Sequence

>MS.gene21160

ATGAGCACCCTCCCTACAACACAAGGGAAAACTGTCCCGGATGCATCTGATTACAAGGGCCGGCCGGCCGACAGGTCCACAACCGGTGGTTGGTCCGCGGCCGCCATGATATTAGGAGGAGAAGTGATGGAGAGGTTGACAACACTCGGCATCGCCGTTAATTTGGTCACATACTTGACCGGTACTATGCATTTGGGCAATGCTGCCTCTGCCAATGTTGTTACTAATTTCTTAGGAACCTCCTTTATGCTCTGTCTATTGGGTGGATTTCTTGCTGATACTTTTCTAGGAAGGTTCGAAATTTAATATATCTATAAAAAAAATTCCTTTCTTATTATGGAAAACTAAGACAAGACTTAGTTATTTTATTTTTGTTATTCAAATGATCCACATTAATTATGATTGGTTTTAATGCCTCGTGATTTCTGAGACTTAATTTAATATTTTTTGCTTCCCATTCTTTGTTTGACAGATATCTCACCATCGCCATCTTTGCAGCTGTCCAAGCAATTGTAAGATAATCTCAACTATTCATTTTGTTGTTTCCATTGTTTTCTAGTACTATTTTACATTCAAATCAAGATTTTAATATTAGTATACATGTAAAAAAGTTTGCAACAATTCAAATAAATATTCTAATCGAAGTAACTCATTAATTTTTAATGATCTGACGATTATAATTGATTGACAATGTAAATTTTTCTTACGCTAACAATGCCTTTGAATTAAATCCTCAAAAATTTAATCATACCCTTGTTTAGTTCTTTGATATTGACGAATGTATGTTTATATTAGGGTGTAACAATATTGACGATATCAACTATAATTCCAAGCTTACATCCACCAAAATGCAAAGAAGACTCTAAATCTTGCATACAAGCAGACAGTAAGCAACTATTGGTGATGTATTTAGCACTTTACATCACGGCCCTCGGCACCGGTGGTCTAAAATCTAGTGTCTCGGGCTTTGGTTCCGATCAATTTGACGATTCAGATGAGCAAGAAAAGAAGGGTATGATTAAATTTTTCAGCTGGTTCTATTTTTTCGTAAGCATAGGGTCTTTGGCAGCGGTGACTGTTCTTGTGTACATACAAGATAACCAAGGTAGAGGTTGGGGTTACGGTATTTGTGCGGTCGCAATTGTGGTTGCGCTTCTTGTTTTCTTGTCCGGTACCCGCAAGTACCGGATCAAGCAACTTGTTGGTAGTCCTTTGACTCAGATTGCGGTCGTGTTTGTGGCTGCTTGGAGGAAGAGACACATGCAATTGCCCTCTGATTCTTCATTGCTCTATGAAGAGGATGATATCCTATGTGAAACACCTAAGACCAAGAAGCAAAGGATGCCACATAGCAAACAGTTCCGGTAAATTTTCTATTCATTCTTCTTAGTATTATAGTATAATAATTATTATTATACATAACTTTATTCTTTTTTAACTTAATAAGTTCTTTTTTTTTTGACACTATGTTAACTTGCTATGTTTATGTCTTGTTGGTGTTCCTCTTAGTTTAAGTAGCTTAATCTAAAGTTTCTCTTCCAATGAATGGAACAATTTGAGTAATAATTTATATAAAAAAATTCAATTATAGTTTCTTGTTGACTAGACTACAATAATGTTTGCTAAACTAGTATTCATTCATTTATTTATTTATTGGATTGTAGAACAAGCAAAACTTTTTTCAATCCCGATCTTCATGATTGGAAACCATTAGAGAAGATTGTCTATACTAAAAACATTGACATAGTTGATATATTTGTGGTTGTTGACTCAAAATTGAATAGTTTGGATTTCAAATTCGTATATTTTTATTTTATTTGAAAACAAAAGTTGGATTATTTAATCTCAAATCTTACTATCACATATATTCTGAAAGTGTAATGCATCAATTTTTTAACATAATATAATTTCGGAGACAATATATCCACCTTTTCCTTCTCTTACCTTCCCATCCCTTCCATTTTCTCCTCTCTTTTCTTTACTCCCCAATTCCCAAACAAATTATAAAGGTTTAGATTCAAAGTTGAGTCAACACAAAGTGATAGAGTGGAATATACTGTATATGTCAAGGAGGGGCCCTATTCGATGTTGATCCTGCCAAGATGCATGGGAGTTTCATTTTCAATTTACCAATTGAGAGCCGTATGCAACTAACAATAAAGACATTTATCATTATTGGGCCCCACTTGATGTAGAAAGAACAAATTATTGGGTGCCACATATTTAATAGTGGGCCATGAAATGACAACTGGGTTATTAAGGATCATTTGCTCCTTAATCATGGTGACAACTCCACGCACGAGCTTAATAGTTAAGAGTAGAAACCAACTAATAATGTGTGGTTTATTCTCTCAAAAAATAATGTGTGGTTTATATAATAGTATAGTATTGGCAAAACTGCACTTTTCGCCCTCTAAGTTTTAAAATGTTACGATTTTGGTTCCTTATTAAAAAAAATTGCAATTTTGGCCCCTTTCGTCCCAAAATTGTTGAGAAGACGCCACGTGTCCCAAAAAAGGGACCATAATCGCAACTTTTTGTAAAGATGTGAGGCCAAAAAGCATATTTCCCTTATGTTAGAGGGTCAAAAGAACATATTTCTCTAAACATGGGGGGTTACTTTTGCAATTTTTTTTAATAGGGGGCCAAAATTGCAACATTTTGAAACTTAGGGACAAAAAGTGCAGTTTAGCCTATAGTATTTTTTGCGTATCGCTTTGGATATTTTCTCTGCCTTTTGAGATTTGCAAGATATCCATCTAGTCTATCTCCTTTCGAAATTATTGCTTTTACATATTCACAAGCTTGTCAACGTCTAAAGTTTCAAAAATCTAACTAAGGATGAGAAAATTAACACCTTTCTTTGTTTTTAGTTAATGTCAAAAAAGAAGTATGCCTTGGACCTCTCATCAATCAAAATTACCTTAAAGTATATTAAGGAGATTGATTGAAAGGGTCAATAAACTTCGGTTACAGTTGAAATTAATTCGAAGCACTTAAGTTCATGTCTAATTGAAATAATTTTTAATTAGACTTTACTTATTTTACCACTGAATTACAAATTAATAAAGCTCATAGTCTATTTTTTTAAAAACACGAGACTTGAGACAAAAAAAAACATAATTAATATGCATATTGCTCCTCTTTGGTGTTGCTTAATATGTATATTTCTCCTCTTTGTTATTACCTTGAAGATTAATGAATTAATTGATTTACATTTTGATCAAACAGTTTCTTAGACAAAGCGGCAATCAAAGGCATAGAAAGTGGCAGTGCAATCACAATCAAGGAGAAATGGTATATCTCTACCTTAACAGATGTGGAAGAAGTTAAAATGGTAATAAGGATGTTACCCATATGGGCCACAACCATAATGTTTTGGACAATCCATGCTCAAATGACAACATTCTCAGTATCACAAGCAACAACCATGGATTGTCACATTGGAACATTTCAAATCCCAGCAGCATCAATGACGGTCTTCTTAATCGGAACTATTCTCCTAACTGTTCCTTTCTACGACCGCTTCATTCGACCAGTCACAAAAAAATTACTAAACTCACACGGATTCACCCCTTTACAACGCATTGGTGTTGGTTTAGTCCTCTCAGTAGTGTCCATGGTTGCGGCAGCACTCATAGAAATGAAGCGGTTGAAATTCGCACGATCACATGGTTTTGTAAACGATCCAACGGCAAAGATGCCATTGAGTGTGTTTTGGTTGGTGCCACAATTTTTCTTTGTTGGGTCTGGAGAGGCCTTTATGTATATGGGACAATTAGACTTTTTTCTAAGAGAATGTCCTAAAGGAATGAAAACTATGAGTACAGGGTTGTTCTTGAGCACACTCTCAATAGGGTTTTTCTTTAGCTCATTATTAGTGACTCTAGTGAACAATGTGACGGGTCCAAATAAACCATGGATTGCGGATAATCTTGATCAAGGGAGGCTCTATGATTTTTATTGGCTATTGGCTATGCTAAGTGCTATAAATGTGGTGATATATTTGGCTTGTGCTAAGTGGTATGTGTACAAGGACAAGAGACTTGCTGAGGCGGGCATAGAATTGGAAGAAATAGATGCCTCTACATTCCATGCATAG
Protein sequence

>MS.gene21160.t1

MSTLPTTQGKTVPDASDYKGRPADRSTTGGWSAAAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYLTIAIFAAVQAIGVTILTISTIIPSLHPPKCKEDSKSCIQADSKQLLVMYLALYITALGTGGLKSSVSGFGSDQFDDSDEQEKKGMIKFFSWFYFFVSIGSLAAVTVLVYIQDNQGRGWGYGICAVAIVVALLVFLSGTRKYRIKQLVGSPLTQIAVVFVAAWRKRHMQLPSDSSLLYEEDDILCETPKTKKQRMPHSKQFRFLDKAAIKGIESGSAITIKEKWYISTLTDVEEVKMVIRMLPIWATTIMFWTIHAQMTTFSVSQATTMDCHIGTFQIPAASMTVFLIGTILLTVPFYDRFIRPVTKKLLNSHGFTPLQRIGVGLVLSVVSMVAAALIEMKRLKFARSHGFVNDPTAKMPLSVFWLVPQFFFVGSGEAFMYMGQLDFFLRECPKGMKTMSTGLFLSTLSIGFFFSSLLVTLVNNVTGPNKPWIADNLDQGRLYDFYWLLAMLSAINVVIYLACAKWYVYKDKRLAEAGIELEEIDASTFHA