AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042632

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042632.t1 MTR_5g055000 97.227 577 16 0 1 577 8 584 0.0 1162
MS.gene042632.t1 MTR_7g088825 57.645 569 235 3 9 573 20 586 0.0 686
MS.gene042632.t1 MTR_7g088790 56.228 578 243 4 3 577 23 593 0.0 669
MS.gene042632.t1 MTR_7g088820 55.009 569 246 5 4 567 18 581 0.0 653
MS.gene042632.t1 MTR_7g088820 54.962 524 226 5 49 567 1 519 0.0 595
MS.gene042632.t1 MTR_7g088820 52.954 474 217 3 97 567 1 471 0.0 526
MS.gene042632.t1 MTR_4g015080 46.364 550 284 8 9 555 32 573 2.96e-171 498
MS.gene042632.t1 MTR_7g067010 45.073 548 294 6 9 555 22 563 1.66e-168 491
MS.gene042632.t1 MTR_3g462710 43.761 553 303 7 5 554 17 564 6.74e-168 489
MS.gene042632.t1 MTR_3g112470 42.531 569 301 8 9 574 21 566 2.54e-156 459
MS.gene042632.t1 MTR_3g112460 42.021 564 310 7 9 571 21 568 5.84e-156 459
MS.gene042632.t1 MTR_5g038060 42.114 577 308 10 1 560 18 585 2.01e-150 446
MS.gene042632.t1 MTR_5g012270 41.007 556 321 5 9 560 27 579 2.48e-149 442
MS.gene042632.t1 MTR_5g012290 42.105 551 310 7 9 554 25 571 6.01e-145 431
MS.gene042632.t1 MTR_3g112450 41.416 565 314 8 9 571 21 570 2.82e-143 426
MS.gene042632.t1 MTR_4g101380 41.772 553 312 5 9 554 25 574 1.46e-140 420
MS.gene042632.t1 MTR_8g469480 39.383 551 320 6 14 555 41 586 1.73e-140 420
MS.gene042632.t1 MTR_3g462710 44.130 460 250 6 97 554 1 455 1.76e-139 412
MS.gene042632.t1 MTR_1g075440 40.909 550 311 8 9 553 26 566 3.46e-139 417
MS.gene042632.t1 MTR_4g107580 37.391 575 346 6 6 572 19 587 1.31e-138 415
MS.gene042632.t1 MTR_7g098200 39.427 558 326 7 9 562 27 576 1.74e-138 415
MS.gene042632.t1 MTR_7g098200 39.318 557 318 8 9 562 27 566 1.34e-135 407
MS.gene042632.t1 MTR_4g107510 37.158 549 335 6 14 554 39 585 2.23e-134 404
MS.gene042632.t1 MTR_7g098040 37.543 578 342 7 9 576 32 600 2.60e-134 405
MS.gene042632.t1 MTR_3g100980 39.362 564 324 6 9 567 14 564 5.07e-134 402
MS.gene042632.t1 MTR_7g098230 38.139 548 329 5 25 569 40 580 3.59e-131 396
MS.gene042632.t1 MTR_8g103233 38.937 583 333 13 1 571 5 576 3.90e-131 395
MS.gene042632.t1 MTR_1g041815 40.037 547 319 5 9 553 25 564 1.01e-130 395
MS.gene042632.t1 MTR_1g041835 39.671 547 321 5 9 553 25 564 1.17e-130 394
MS.gene042632.t1 MTR_3g069500 36.879 564 339 6 9 572 33 579 2.20e-130 394
MS.gene042632.t1 MTR_4g114340 40.569 562 317 6 9 565 22 571 3.98e-130 393
MS.gene042632.t1 MTR_3g100980 37.500 592 324 7 9 567 14 592 2.54e-128 389
MS.gene042632.t1 MTR_4g011280 39.344 549 315 10 10 550 31 569 9.22e-128 387
MS.gene042632.t1 MTR_7g098160 36.396 566 343 7 9 569 31 584 1.05e-127 387
MS.gene042632.t1 MTR_2g101640 35.540 574 354 8 7 571 19 585 1.11e-126 385
MS.gene042632.t1 MTR_1g042310 37.477 547 334 5 9 553 24 564 1.76e-126 384
MS.gene042632.t1 MTR_2g101590 36.742 577 345 9 6 571 21 588 2.63e-126 385
MS.gene042632.t1 MTR_3g069440 37.522 565 345 6 9 572 31 588 5.55e-126 382
MS.gene042632.t1 MTR_4g107530 36.014 572 345 9 14 569 36 602 3.21e-125 381
MS.gene042632.t1 MTR_7g065080 35.752 565 340 7 9 569 29 574 3.64e-125 380
MS.gene042632.t1 MTR_2g101650 34.364 582 351 8 6 564 19 592 1.16e-124 379
MS.gene042632.t1 MTR_1g042310 37.879 528 320 5 28 553 6 527 1.72e-124 377
MS.gene042632.t1 MTR_3g072300 37.681 552 337 5 11 561 24 569 3.32e-124 378
MS.gene042632.t1 MTR_4g019580 36.182 550 338 8 9 556 34 572 1.86e-123 376
MS.gene042632.t1 MTR_3g069420 34.798 569 360 7 9 574 32 592 2.24e-123 376
MS.gene042632.t1 MTR_1g042310 37.833 526 319 5 30 553 1 520 3.02e-123 374
MS.gene042632.t1 MTR_5g038190 35.495 555 342 6 8 553 21 568 5.57e-123 374
MS.gene042632.t1 MTR_7g098090 36.077 571 343 8 9 569 31 589 6.25e-123 375
MS.gene042632.t1 MTR_1g009200 36.972 568 336 8 11 569 27 581 1.39e-122 374
MS.gene042632.t1 MTR_7g098180 35.677 569 349 6 9 568 29 589 7.74e-122 372
MS.gene042632.t1 MTR_5g085850 37.828 571 318 11 9 571 28 569 9.33e-122 372
MS.gene042632.t1 MTR_2g101610 36.585 574 344 9 9 571 25 589 1.44e-121 373
MS.gene042632.t1 MTR_7g098220 36.749 566 340 8 9 569 28 580 2.82e-121 370
MS.gene042632.t1 MTR_1g026740 36.514 545 331 8 12 550 18 553 3.91e-121 369
MS.gene042632.t1 MTR_1g041875 37.665 531 312 7 3 529 21 536 5.16e-120 367
MS.gene042632.t1 MTR_4g107610 35.751 579 349 8 8 571 28 598 1.88e-119 366
MS.gene042632.t1 MTR_7g098220 36.929 547 327 8 28 569 3 536 4.96e-119 363
MS.gene042632.t1 MTR_8g038880 35.764 576 334 7 6 569 15 566 6.88e-119 363
MS.gene042632.t1 MTR_7g005930 35.777 573 348 8 5 568 23 584 1.30e-118 363
MS.gene042632.t1 MTR_4g033325 38.321 548 310 8 9 554 29 550 3.56e-118 361
MS.gene042632.t1 MTR_1g041885 39.062 512 291 9 30 536 1 496 9.17e-118 359
MS.gene042632.t1 MTR_8g469310 35.902 571 341 4 3 559 18 577 5.14e-117 359
MS.gene042632.t1 MTR_3g005010 35.390 551 317 7 9 554 28 544 6.72e-117 358
MS.gene042632.t1 MTR_8g469470 34.286 560 345 8 9 553 30 581 8.59e-117 358
MS.gene042632.t1 MTR_5g038380 35.979 567 335 6 3 553 20 574 1.12e-116 358
MS.gene042632.t1 MTR_2g005130 37.294 547 318 8 10 553 39 563 1.37e-116 358
MS.gene042632.t1 MTR_1g116930 34.948 578 346 10 1 568 13 570 1.89e-116 358
MS.gene042632.t1 MTR_4g033315 37.209 559 315 10 3 554 23 552 4.50e-116 356
MS.gene042632.t1 MTR_4g033310 37.209 559 315 10 3 554 23 552 4.50e-116 356
MS.gene042632.t1 MTR_3g014790 34.489 577 340 9 2 564 3 555 2.10e-115 354
MS.gene042632.t1 MTR_1g026750 36.101 554 331 9 7 550 14 554 2.59e-115 354
MS.gene042632.t1 MTR_0294s0020 37.387 551 311 9 9 554 29 550 7.88e-115 353
MS.gene042632.t1 MTR_5g014150 36.140 570 352 8 9 572 42 605 1.18e-114 354
MS.gene042632.t1 MTR_7g013270 36.036 555 337 9 5 550 78 623 2.94e-114 354
MS.gene042632.t1 MTR_1g085090 37.063 572 327 13 9 575 17 560 4.62e-114 352
MS.gene042632.t1 MTR_7g064800 34.079 581 368 5 1 571 16 591 7.27e-114 351
MS.gene042632.t1 MTR_7g098200 39.574 470 272 7 97 562 1 462 1.02e-113 347
MS.gene042632.t1 MTR_7g064780 33.042 572 368 4 8 569 23 589 1.50e-113 350
MS.gene042632.t1 MTR_7g006540 35.223 582 354 10 11 577 63 636 1.79e-113 352
MS.gene042632.t1 MTR_7g065080 36.436 505 298 8 69 569 2 487 2.20e-113 347
MS.gene042632.t1 MTR_7g010820 35.951 573 346 11 9 571 24 585 9.50e-113 348
MS.gene042632.t1 MTR_2g017750 33.448 580 368 6 3 567 26 602 2.10e-111 345
MS.gene042632.t1 MTR_2g101560 34.896 576 354 10 9 572 25 591 2.17e-111 346
MS.gene042632.t1 MTR_4g107670 35.017 574 342 9 3 558 16 576 8.72e-111 343
MS.gene042632.t1 MTR_1g026770 35.294 544 338 9 12 550 16 550 3.24e-110 341
MS.gene042632.t1 MTR_4g033330 37.546 538 303 11 1 532 20 530 8.21e-110 339
MS.gene042632.t1 MTR_4g098800 35.179 560 342 8 21 572 46 592 2.21e-109 340
MS.gene042632.t1 MTR_4g098800 35.179 560 342 8 21 572 111 657 1.41e-108 340
MS.gene042632.t1 MTR_1g057460 34.846 551 328 9 6 550 39 564 1.48e-108 337
MS.gene042632.t1 MTR_7g111260 36.477 562 327 10 9 565 17 553 5.73e-107 333
MS.gene042632.t1 MTR_8g087810 34.050 558 356 5 8 553 18 575 3.68e-106 331
MS.gene042632.t1 MTR_4g033375 38.337 493 272 7 9 495 30 496 9.66e-106 327
MS.gene042632.t1 MTR_4g033395 39.388 490 271 9 9 495 30 496 1.36e-105 327
MS.gene042632.t1 MTR_8g087780 33.452 562 363 5 3 553 13 574 1.19e-104 327
MS.gene042632.t1 MTR_1g057460 33.977 518 311 9 39 550 1 493 1.28e-97 306
MS.gene042632.t1 MTR_4g033325 37.310 461 261 8 96 554 18 452 2.52e-97 304
MS.gene042632.t1 MTR_4g033325 37.327 434 254 6 123 554 9 426 1.50e-95 299
MS.gene042632.t1 MTR_4g033385 37.446 462 262 10 96 554 16 453 3.62e-94 296
MS.gene042632.t1 MTR_0236s0050 34.363 518 309 9 39 550 1 493 4.41e-94 297
MS.gene042632.t1 MTR_4g123537 35.091 550 338 9 8 554 38 571 6.97e-94 300
MS.gene042632.t1 MTR_7g098150 36.449 428 260 4 9 431 31 451 1.82e-90 287
MS.gene042632.t1 MTR_2g093160 31.712 555 343 9 11 555 21 549 7.13e-90 288
MS.gene042632.t1 MTR_2g093640 32.971 552 340 9 11 555 21 549 9.90e-89 285
MS.gene042632.t1 MTR_2g093180 32.550 553 342 9 11 555 21 550 6.64e-88 283
MS.gene042632.t1 MTR_7g098210 31.509 530 271 12 30 554 1 443 4.42e-79 256
MS.gene042632.t1 MTR_6g008690 29.074 540 342 6 28 553 24 536 1.11e-72 242
MS.gene042632.t1 MTR_7g052600 32.103 542 329 11 9 550 23 525 2.00e-69 233
MS.gene042632.t1 MTR_4g024930 30.601 549 344 13 9 550 34 552 2.54e-69 234
MS.gene042632.t1 MTR_7g051830 31.204 548 338 9 3 550 17 525 1.68e-68 231
MS.gene042632.t1 MTR_7g051880 31.022 548 339 10 3 550 17 525 1.22e-67 228
MS.gene042632.t1 MTR_1g009170 31.881 436 222 11 139 567 11 378 4.55e-59 202
MS.gene042632.t1 MTR_4g033310 35.357 280 169 3 278 554 218 488 4.04e-56 197
MS.gene042632.t1 MTR_4g033310 41.989 181 95 2 3 183 23 193 7.60e-32 129
MS.gene042632.t1 MTR_3g065350 38.125 160 91 3 319 478 1 152 4.08e-26 105
MS.gene042632.t1 MTR_4g033390 34.091 88 57 1 467 554 30 116 7.26e-13 66.2
MS.gene042632.t1 MTR_8g091265 36.111 108 60 4 282 382 3 108 1.82e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042632.t1 AT1G68570 74.914 582 140 3 2 577 12 593 0.0 895
MS.gene042632.t1 AT1G68570 75.492 559 133 2 23 577 5 563 0.0 873
MS.gene042632.t1 AT3G54140 44.891 548 295 5 9 554 22 564 1.58e-171 498
MS.gene042632.t1 AT3G54140 44.891 548 295 5 9 554 22 564 1.58e-171 498
MS.gene042632.t1 AT5G01180 45.471 552 293 6 9 558 23 568 1.34e-170 496
MS.gene042632.t1 AT5G01180 45.471 552 293 6 9 558 23 568 1.34e-170 496
MS.gene042632.t1 AT5G01180 45.471 552 293 6 9 558 23 568 1.34e-170 496
MS.gene042632.t1 AT2G02040 43.784 555 303 7 4 554 33 582 1.83e-161 473
MS.gene042632.t1 AT1G62200 43.407 546 293 6 8 548 49 583 1.05e-153 454
MS.gene042632.t1 AT1G69870 40.760 579 328 8 4 574 44 615 1.46e-150 447
MS.gene042632.t1 AT1G62200 41.217 575 293 7 8 548 49 612 2.60e-147 438
MS.gene042632.t1 AT1G62200 41.217 575 293 7 8 548 63 626 3.99e-147 438
MS.gene042632.t1 AT1G18880 38.869 566 328 8 14 567 22 581 3.59e-140 419
MS.gene042632.t1 AT3G16180 38.715 576 332 9 9 572 21 587 4.01e-139 416
MS.gene042632.t1 AT1G52190 37.937 572 333 8 6 563 16 579 2.01e-138 415
MS.gene042632.t1 AT2G26690 42.385 545 294 7 9 547 22 552 2.54e-138 414
MS.gene042632.t1 AT5G46040 38.821 577 338 6 1 569 16 585 3.18e-138 414
MS.gene042632.t1 AT5G46050 39.209 556 328 5 1 553 16 564 7.35e-138 413
MS.gene042632.t1 AT2G26690 42.722 529 283 7 25 547 5 519 3.43e-136 407
MS.gene042632.t1 AT2G02020 39.122 547 292 8 9 555 40 545 3.58e-136 407
MS.gene042632.t1 AT2G26690 42.610 521 279 7 33 547 1 507 7.62e-133 398
MS.gene042632.t1 AT1G12110 39.748 556 321 7 9 557 25 573 9.79e-133 400
MS.gene042632.t1 AT3G47960 37.887 549 328 6 14 553 64 608 4.60e-128 389
MS.gene042632.t1 AT5G62680 36.348 586 352 9 2 570 34 615 1.17e-127 388
MS.gene042632.t1 AT1G59740 37.523 541 326 4 11 548 41 572 2.40e-126 384
MS.gene042632.t1 AT3G21670 39.192 569 313 8 9 566 27 573 1.51e-123 376
MS.gene042632.t1 AT3G54450 35.816 564 338 7 9 567 10 554 2.84e-123 374
MS.gene042632.t1 AT1G27080 38.230 565 324 10 9 563 12 561 5.42e-123 374
MS.gene042632.t1 AT3G53960 37.004 554 331 9 9 556 35 576 3.67e-122 373
MS.gene042632.t1 AT1G33440 37.324 568 328 8 11 571 38 584 1.35e-121 372
MS.gene042632.t1 AT5G13400 36.234 563 346 7 11 565 64 621 2.09e-121 372
MS.gene042632.t1 AT2G02020 37.112 547 282 11 9 555 40 524 2.45e-119 363
MS.gene042632.t1 AT2G40460 36.445 557 335 7 11 566 24 562 5.56e-119 364
MS.gene042632.t1 AT1G27040 36.984 557 329 7 3 552 19 560 2.41e-118 362
MS.gene042632.t1 AT1G27040 36.984 557 329 7 3 552 15 556 2.63e-118 362
MS.gene042632.t1 AT2G37900 36.000 550 334 7 9 556 36 569 8.72e-118 361
MS.gene042632.t1 AT1G69850 36.126 573 336 7 3 554 17 580 1.12e-117 361
MS.gene042632.t1 AT1G22540 36.625 557 327 6 3 556 22 555 1.58e-116 357
MS.gene042632.t1 AT5G28470 36.136 559 336 9 9 558 15 561 2.30e-115 354
MS.gene042632.t1 AT1G27040 37.430 537 314 7 23 552 7 528 2.38e-114 351
MS.gene042632.t1 AT1G27080 38.722 532 301 10 42 563 3 519 8.57e-114 349
MS.gene042632.t1 AT5G46050 39.651 459 268 4 97 553 1 452 7.85e-113 345
MS.gene042632.t1 AT5G28470 35.957 559 335 10 9 558 15 559 1.63e-112 347
MS.gene042632.t1 AT1G32450 36.632 576 345 11 9 571 35 603 4.86e-111 345
MS.gene042632.t1 AT1G72140 34.220 564 326 10 1 553 23 552 2.61e-109 338
MS.gene042632.t1 AT1G69860 36.612 549 329 8 9 553 16 549 7.69e-109 337
MS.gene042632.t1 AT2G37900 36.040 505 305 7 54 556 2 490 1.19e-108 335
MS.gene042632.t1 AT1G72125 34.636 563 342 8 1 557 18 560 1.33e-108 337
MS.gene042632.t1 AT4G21680 37.766 564 331 10 1 552 17 572 2.73e-107 334
MS.gene042632.t1 AT1G22570 35.009 557 332 10 9 556 28 563 1.32e-106 332
MS.gene042632.t1 AT1G22570 35.305 541 320 10 25 556 7 526 3.33e-105 327
MS.gene042632.t1 AT1G72120 33.630 562 343 9 1 556 18 555 1.44e-103 323
MS.gene042632.t1 AT3G45650 34.091 572 340 12 6 571 17 557 4.21e-103 322
MS.gene042632.t1 AT1G22550 33.813 556 339 8 9 556 28 562 5.97e-103 322
MS.gene042632.t1 AT5G19640 33.514 555 342 11 12 563 60 590 2.00e-100 317
MS.gene042632.t1 AT3G45650 32.609 598 340 13 6 571 17 583 2.20e-97 308
MS.gene042632.t1 AT3G45660 32.332 566 351 11 3 562 13 552 2.19e-96 305
MS.gene042632.t1 AT3G45660 32.332 566 351 11 3 562 13 552 2.19e-96 305
MS.gene042632.t1 AT3G45660 32.332 566 351 11 3 562 34 573 4.51e-96 305
MS.gene042632.t1 AT3G45720 31.028 564 356 10 11 568 19 555 6.48e-96 303
MS.gene042632.t1 AT1G72130 33.394 548 321 9 12 554 26 534 4.88e-95 301
MS.gene042632.t1 AT5G62730 34.759 561 327 11 9 556 54 588 4.95e-94 300
MS.gene042632.t1 AT3G45710 31.866 568 344 12 10 567 20 554 1.39e-93 298
MS.gene042632.t1 AT3G45680 32.620 561 348 13 11 566 20 555 1.20e-92 295
MS.gene042632.t1 AT5G62730 34.909 550 319 11 20 556 6 529 3.01e-92 293
MS.gene042632.t1 AT3G45700 31.851 562 351 12 7 567 12 542 4.86e-90 288
MS.gene042632.t1 AT3G25260 33.764 542 310 13 11 550 21 515 4.52e-85 274
MS.gene042632.t1 AT5G14940 28.302 583 366 13 5 569 3 551 4.86e-81 265
MS.gene042632.t1 AT3G45690 30.071 562 324 14 11 568 18 514 7.30e-81 263
MS.gene042632.t1 AT1G72130 34.169 439 254 8 121 554 8 416 3.88e-79 256
MS.gene042632.t1 AT1G72130 34.169 439 254 8 121 554 8 416 3.88e-79 256
MS.gene042632.t1 AT3G25280 32.477 545 319 10 11 550 21 521 5.09e-79 258
MS.gene042632.t1 AT3G01350 28.319 565 347 11 28 562 24 560 6.44e-77 254
MS.gene042632.t1 AT2G38100 26.071 537 345 13 42 569 5 498 6.74e-46 169
MS.gene042632.t1 AT2G38100 26.071 537 345 13 42 569 21 514 1.58e-45 168
MS.gene042632.t1 AT2G38100 26.071 537 345 13 42 569 27 520 2.67e-45 168
MS.gene042632.t1 AT5G11570 33.852 257 155 5 295 550 234 476 2.38e-39 150
MS.gene042632.t1 AT5G11570 37.615 218 125 3 12 224 14 225 2.05e-35 139

Find 139 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTAGCAGCTTTGGTTAA+TGG 0.197024 5.2:-46588493 None:intergenic
TCCTGATAATAATCTCAATA+AGG 0.230319 5.2:+46593813 MS.gene042632:CDS
TTCCTTCCGGGTTCAAGTTC+CGG 0.272705 5.2:-46590596 None:intergenic
TAATCCCAATCTCAGTGTTT+TGG 0.287880 5.2:+46593581 MS.gene042632:CDS
ATGGATCTGAATTTGCTTAT+AGG 0.288804 5.2:-46593920 None:intergenic
CGGGTAAACGGGCTTCCTTC+CGG 0.293108 5.2:-46590609 None:intergenic
GAATTATATCAGTACACTTT+TGG 0.301867 5.2:+46593741 MS.gene042632:CDS
AGTGAGAGTGTTAGCAGCTT+TGG 0.308153 5.2:-46588500 None:intergenic
TAGGTGTCTGTTCATAGTTT+TGG 0.308975 5.2:-46593299 None:intergenic
GTTGGGTGGGGATGGGGCCT+TGG 0.309152 5.2:+46590513 MS.gene042632:CDS
TAATCAGGATGGGACCAATA+TGG 0.312169 5.2:+46593215 MS.gene042632:CDS
GGGTAAACGGGCTTCCTTCC+GGG 0.322366 5.2:-46590608 None:intergenic
AATGTAGAGTTAGGCACTTT+AGG 0.327409 5.2:-46590675 None:intergenic
TGCTGGGATTTCGAATGATT+TGG 0.337859 5.2:-46593323 None:intergenic
ATCTCAATAATTGCATTCAT+TGG 0.339608 5.2:+46590558 MS.gene042632:CDS
GTGCCACAATATAGCCTTCA+TGG 0.348499 5.2:+46593607 MS.gene042632:CDS
TGATATAACAATGTAGAGTT+AGG 0.358534 5.2:-46590684 None:intergenic
CCCTTATTGAGATTATTATC+AGG 0.367316 5.2:-46593814 None:intergenic
CGAGTGGCTCGTAGATTAAC+TGG 0.370595 5.2:+46593415 MS.gene042632:CDS
ATATGAAAACACCAGACTTA+TGG 0.370617 5.2:+46593152 MS.gene042632:CDS
CCTGATAATAATCTCAATAA+GGG 0.370828 5.2:+46593814 MS.gene042632:CDS
AATTACTATCTGGTAAATAA+TGG 0.372944 5.2:-46588614 None:intergenic
GTTGTCCTGTACTAGCTTCC+TGG 0.376790 5.2:-46590284 None:intergenic
TTGGTGGATATCGACTTTAC+CGG 0.381435 5.2:+46590577 MS.gene042632:CDS
TTTATATTCAAGACAATGTT+GGG 0.387510 5.2:+46590496 MS.gene042632:CDS
AACTGTTATCCTCTTTATGA+TGG 0.388034 5.2:-46593939 None:intergenic
GGATTTCGAATGATTTGGTT+AGG 0.389784 5.2:-46593318 None:intergenic
GACAATGTTGGGTGGGGATG+GGG 0.392224 5.2:+46590507 MS.gene042632:CDS
CGACCCTGCGTGGTAGCGTT+TGG 0.399578 5.2:+46590360 MS.gene042632:CDS
CTTGATGCATCAATAACATT+AGG 0.404501 5.2:+46590717 MS.gene042632:CDS
ACAAGCCAAAACACTGAGAT+TGG 0.409770 5.2:-46593586 None:intergenic
TAAGACCACCACCTTGTAAA+GGG 0.412663 5.2:+46590250 MS.gene042632:CDS
AGGAATTGAAATCAATAATC+AGG 0.426766 5.2:+46593200 MS.gene042632:CDS
TAATCTCAATAAGGGGAAGT+TGG 0.434640 5.2:+46593822 MS.gene042632:CDS
AAGTTTACTGCAGGGCCTAA+TGG 0.441477 5.2:+46593778 MS.gene042632:CDS
AAGACAATGTTGGGTGGGGA+TGG 0.443676 5.2:+46590505 MS.gene042632:CDS
AGACAATGTTGGGTGGGGAT+GGG 0.446260 5.2:+46590506 MS.gene042632:CDS
AAGGGAGAAAGTGCCTTGTT+GGG 0.461179 5.2:-46593269 None:intergenic
ATGGGACCAATATGGGCATC+AGG 0.463348 5.2:+46593223 MS.gene042632:CDS
CTACTAAGTGCACTCGGATC+GGG 0.463936 5.2:+46590330 MS.gene042632:CDS
AGAATGCCTGATGCCCATAT+TGG 0.472545 5.2:-46593229 None:intergenic
AGAATGGTAATCATACTAGA+AGG 0.472601 5.2:+46588036 MS.gene042632:CDS
TACTGAGAAGTTAGCAGTGG+TGG 0.482433 5.2:+46588423 MS.gene042632:CDS
GTTTATATTCAAGACAATGT+TGG 0.483529 5.2:+46590495 MS.gene042632:CDS
CATACCTCCTCCCCTTTACA+AGG 0.486223 5.2:-46590261 None:intergenic
ATTATTATCAGGAAGCCAAT+TGG 0.486251 5.2:-46593803 None:intergenic
AATCAGGATGGGACCAATAT+GGG 0.488017 5.2:+46593216 MS.gene042632:CDS
GCATGTGAAGCTGTGTTGTT+AGG 0.489463 5.2:-46588471 None:intergenic
GGAAGCCAATTGGTACCATT+AGG 0.489490 5.2:-46593793 None:intergenic
GAAGGGAGAAAGTGCCTTGT+TGG 0.491103 5.2:-46593270 None:intergenic
ATAAGCTTCCTTCACAGAAT+GGG 0.492433 5.2:+46593451 MS.gene042632:CDS
GTTGATAGCCTCCATAAGTC+TGG 0.494596 5.2:-46593163 None:intergenic
CAAGGTGGTGGTCTTAATTG+TGG 0.495509 5.2:-46590243 None:intergenic
AATACCGACATGGACCCTGC+TGG 0.496239 5.2:-46593340 None:intergenic
GCTAACACTCTCACTAACTT+TGG 0.499426 5.2:+46588508 MS.gene042632:CDS
TCAAGCTTGACACCATTGCT+TGG 0.502976 5.2:+46588538 MS.gene042632:CDS
TCAATAATTGCATTCATTGG+TGG 0.503989 5.2:+46590561 MS.gene042632:CDS
GATGCATCAATAACATTAGG+AGG 0.506441 5.2:+46590720 MS.gene042632:CDS
ACAATATAGCCTTCATGGAA+TGG 0.508930 5.2:+46593612 MS.gene042632:CDS
TTCCTTCACAGAATGGGCAT+TGG 0.510988 5.2:+46593457 MS.gene042632:CDS
TTTGAAAAGATGGAGAAGAA+TGG 0.511164 5.2:+46588020 None:intergenic
GCAGTACTTGTCATACTCTC+AGG 0.513223 5.2:-46593685 None:intergenic
AAATCATTCGAAATCCCAGC+AGG 0.515566 5.2:+46593325 MS.gene042632:CDS
CAGGGCCTAATGGTACCAAT+TGG 0.515633 5.2:+46593788 MS.gene042632:CDS
TATTCAAGACAATGTTGGGT+GGG 0.515890 5.2:+46590500 MS.gene042632:CDS
TTGGTACACAAGTTTACTGC+AGG 0.516278 5.2:+46593769 MS.gene042632:CDS
AACACTCTCACTAACTTTGG+TGG 0.517057 5.2:+46588511 MS.gene042632:CDS
ATTCAAGACAATGTTGGGTG+GGG 0.518324 5.2:+46590501 MS.gene042632:CDS
GAAACGAAAGAAGGTAGCTA+TGG 0.519384 5.2:+46593528 MS.gene042632:CDS
TTAAGACCACCACCTTGTAA+AGG 0.521958 5.2:+46590249 MS.gene042632:CDS
TAAAGGGGAGGAGGTATGCC+AGG 0.523753 5.2:+46590266 MS.gene042632:CDS
TATAAGCTTCCTTCACAGAA+TGG 0.527460 5.2:+46593450 MS.gene042632:CDS
CAAGCCAAAACACTGAGATT+GGG 0.530147 5.2:-46593585 None:intergenic
TCCTCCCCTTTACAAGGTGG+TGG 0.535350 5.2:-46590255 None:intergenic
TTTGGACATCAATTTCTCTA+GGG 0.538439 5.2:+46593719 MS.gene042632:CDS
TCTACTAAGTGCACTCGGAT+CGG 0.539272 5.2:+46590329 MS.gene042632:CDS
TATGATTAGTTTGACTATGT+CGG 0.540452 5.2:+46590212 MS.gene042632:CDS
AATTCAGATCCATCATAAAG+AGG 0.544449 5.2:+46593930 MS.gene042632:CDS
ACTGAGAAGTTAGCAGTGGT+GGG 0.545206 5.2:+46588424 MS.gene042632:CDS
GAGATAAACATTGCCAATGT+GGG 0.548246 5.2:-46590540 None:intergenic
TTGCCAATGTGGGGATTCCA+AGG 0.550082 5.2:-46590530 None:intergenic
CTGGTAAATAATGGAAGCAA+CGG 0.552887 5.2:-46588605 None:intergenic
CTAAGTGCACTCGGATCGGG+TGG 0.559356 5.2:+46590333 MS.gene042632:CDS
ATTGAAATCAATAATCAGGA+TGG 0.565434 5.2:+46593204 MS.gene042632:CDS
ATACCGACATGGACCCTGCT+GGG 0.565654 5.2:-46593339 None:intergenic
CGTTGAAATGAAACGAAAGA+AGG 0.566796 5.2:+46593519 MS.gene042632:CDS
ATCTGATTCATCGAATTGAT+CGG 0.567827 5.2:-46590385 None:intergenic
TTGAAATCAATAATCAGGAT+GGG 0.570095 5.2:+46593205 MS.gene042632:CDS
CAGTTAATCTACGAGCCACT+CGG 0.573812 5.2:-46593414 None:intergenic
TGAGATAAACATTGCCAATG+TGG 0.576745 5.2:-46590541 None:intergenic
GATTAAGACACGGTCATAGA+GGG 0.581651 5.2:-46593392 None:intergenic
GGTGAAGAGCATTGTGAGGA+TGG 0.581690 5.2:-46593365 None:intergenic
GGATTAAGACACGGTCATAG+AGG 0.582064 5.2:-46593393 None:intergenic
GCTCCAAACGCTACCACGCA+GGG 0.582688 5.2:-46590363 None:intergenic
ACTTTACCGGAACTTGAACC+CGG 0.583922 5.2:+46590590 MS.gene042632:CDS
GGCTCCAAACGCTACCACGC+AGG 0.589118 5.2:-46590364 None:intergenic
GAAATGAAAGCACCAAGCAA+TGG 0.589853 5.2:-46588550 None:intergenic
GTTTACCCGACTTGTAAAAG+TGG 0.592261 5.2:+46590623 MS.gene042632:CDS
GTATGCCAGGAAGCTAGTAC+AGG 0.596922 5.2:+46590279 MS.gene042632:CDS
ACCACCTTGTAAAGGGGAGG+AGG 0.597387 5.2:+46590257 MS.gene042632:CDS
CAAGGCAGCAATAGTGACAG+AGG 0.600878 5.2:+46593123 MS.gene042632:CDS
AAGCTTCAGCCATTCCATGA+AGG 0.601801 5.2:-46593621 None:intergenic
TTCAACGAATCCAGCAACAA+AGG 0.607512 5.2:-46593503 None:intergenic
TACCGGAACTTGAACCCGGA+AGG 0.608598 5.2:+46590594 MS.gene042632:CDS
AACCAATGCCCATTCTGTGA+AGG 0.612186 5.2:-46593459 None:intergenic
CCGACTTGTAAAAGTGGGTG+TGG 0.612323 5.2:+46590629 MS.gene042632:CDS
CTGATAATAATCTCAATAAG+GGG 0.613450 5.2:+46593815 MS.gene042632:CDS
TGTGAAGGAAGCTTATACCA+CGG 0.613490 5.2:-46593444 None:intergenic
GGGCCTTGGAATCCCCACAT+TGG 0.619404 5.2:+46590527 MS.gene042632:CDS
TTTACCCGACTTGTAAAAGT+GGG 0.621054 5.2:+46590624 MS.gene042632:CDS
AGATAAACATTGCCAATGTG+GGG 0.622888 5.2:-46590539 None:intergenic
TGAAAACACCAGACTTATGG+AGG 0.627460 5.2:+46593155 MS.gene042632:CDS
GAGTATGACAAGTACTGCAA+TGG 0.633328 5.2:+46593690 MS.gene042632:CDS
ATATTCAAGACAATGTTGGG+TGG 0.637995 5.2:+46590499 MS.gene042632:CDS
ACCACCACCTTGTAAAGGGG+AGG 0.640217 5.2:+46590254 MS.gene042632:CDS
AAGACCACCACCTTGTAAAG+GGG 0.641620 5.2:+46590251 MS.gene042632:CDS
GCTATCAACTGTTCACAGAG+TGG 0.641735 5.2:+46593177 MS.gene042632:CDS
TGCAGTAAACTTGTGTACCA+AGG 0.643581 5.2:-46593767 None:intergenic
CAAACGCTACCACGCAGGGT+CGG 0.644069 5.2:-46590359 None:intergenic
ATTCCATGAAGGCTATATTG+TGG 0.645084 5.2:-46593610 None:intergenic
ATGCATCAATAACATTAGGA+GGG 0.645194 5.2:+46590721 MS.gene042632:CDS
TCACTTCTACTAAGTGCACT+CGG 0.645604 5.2:+46590324 MS.gene042632:CDS
GACACGGTCATAGAGGGCAA+TGG 0.646638 5.2:-46593386 None:intergenic
ACCTCCTCCCCTTTACAAGG+TGG 0.650601 5.2:-46590258 None:intergenic
ATCAACTGTTCACAGAGTGG+AGG 0.656720 5.2:+46593180 MS.gene042632:CDS
ATCACAGCATATGCCCAACA+AGG 0.657237 5.2:+46593256 MS.gene042632:CDS
GGGTGGGATCCGACCCTGCG+TGG 0.657844 5.2:+46590350 MS.gene042632:CDS
CATGGGAACAGCTATACTTG+TGG 0.666916 5.2:+46590458 MS.gene042632:CDS
AAGAAGGTAGCTATGGAGCA+CGG 0.668396 5.2:+46593535 MS.gene042632:CDS
TGGTACACAAGTTTACTGCA+GGG 0.672147 5.2:+46593770 MS.gene042632:CDS
TAAGTGCACTCGGATCGGGT+GGG 0.676292 5.2:+46590334 MS.gene042632:CDS
TGACCGTGTCTTAATCCGAG+TGG 0.677752 5.2:+46593399 MS.gene042632:CDS
AATCCCAGCAGGGTCCATGT+CGG 0.687979 5.2:+46593336 MS.gene042632:CDS
AATCATTCGAAATCCCAGCA+GGG 0.692056 5.2:+46593326 MS.gene042632:CDS
AGATTAACTGGACTTGACCG+TGG 0.706631 5.2:+46593427 MS.gene042632:CDS
GGTTACTGAGAAGTTAGCAG+TGG 0.712724 5.2:+46588420 MS.gene042632:CDS
CAATGGTGAAGAGCATTGTG+AGG 0.730767 5.2:-46593369 None:intergenic
GAGGATGGTGAATACCGACA+TGG 0.733860 5.2:-46593350 None:intergenic
GAGCCACTCGGATTAAGACA+CGG 0.745498 5.2:-46593402 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAATATAAAAGAGTT+AGG - chr5.2:46588113-46588132 None:intergenic 10.0%
!! AACATACATATTAAAAAAAA+TGG - chr5.2:46590091-46590110 None:intergenic 10.0%
!! AATTTAATATAAAAGAGTTA+GGG - chr5.2:46588112-46588131 None:intergenic 10.0%
!! TAATATATTTATTTAAGTAG+AGG + chr5.2:46591580-46591599 MS.gene042632:intron 10.0%
!! TATAATAATGATGATTAATT+TGG - chr5.2:46591817-46591836 None:intergenic 10.0%
!! TATATCTATACTATATATAA+AGG - chr5.2:46592591-46592610 None:intergenic 10.0%
!!! ATAAATAAAATTCACTTTTT+AGG - chr5.2:46590961-46590980 None:intergenic 10.0%
!!! GTTTAATATAAAATTCATTT+TGG - chr5.2:46588925-46588944 None:intergenic 10.0%
!!! TTACTTGTATTTAAAATTAA+GGG + chr5.2:46592514-46592533 MS.gene042632:intron 10.0%
!!! TTATTAATTACATTGTTTTT+TGG - chr5.2:46589733-46589752 None:intergenic 10.0%
!! AAGTTTAATTGAAAAAATAG+AGG - chr5.2:46593019-46593038 None:intergenic 15.0%
!! AATAAAAAAAAATGTAAGGA+TGG - chr5.2:46589526-46589545 None:intergenic 15.0%
!! ACTAATCATTACTAAAAATA+TGG + chr5.2:46592041-46592060 MS.gene042632:intron 15.0%
!! ATGTAAAATCATAATAAAGA+AGG - chr5.2:46588669-46588688 None:intergenic 15.0%
!! CATTCATTTAATGATATATT+TGG + chr5.2:46590897-46590916 MS.gene042632:intron 15.0%
!! CTCAAATAAAAAAAAATGTA+AGG - chr5.2:46589530-46589549 None:intergenic 15.0%
!! GAATAAAAAATCTTTCAATA+AGG - chr5.2:46590154-46590173 None:intergenic 15.0%
!! GTATTAAAAAACATTATGAA+AGG - chr5.2:46590815-46590834 None:intergenic 15.0%
!! TATATAATAATATATTGTCC+TGG + chr5.2:46589667-46589686 MS.gene042632:intron 15.0%
!! TATATATACTAGCAAAAAAA+GGG + chr5.2:46592157-46592176 MS.gene042632:intron 15.0%
!! TATATTATTATATACGCAAT+AGG - chr5.2:46589661-46589680 None:intergenic 15.0%
!! TATTACAATAACTTTAAACA+AGG - chr5.2:46593052-46593071 None:intergenic 15.0%
!! TCATATCAAATCTTTAAATT+CGG + chr5.2:46591252-46591271 MS.gene042632:intron 15.0%
!! TTATATATACTAGCAAAAAA+AGG + chr5.2:46592156-46592175 MS.gene042632:intron 15.0%
!! TTCAATAATTGAGTTAATAA+AGG + chr5.2:46591022-46591041 MS.gene042632:intron 15.0%
!!! AGTTTGTTATACTTTTTAAA+TGG + chr5.2:46592376-46592395 MS.gene042632:intron 15.0%
!!! ATGAATAGTTTTTTTTTTCA+TGG + chr5.2:46589286-46589305 MS.gene042632:intron 15.0%
!!! ATTTTGCTTATATTTTGAAA+CGG - chr5.2:46590863-46590882 None:intergenic 15.0%
!!! CTTACATTTTTTTTTATTTG+AGG + chr5.2:46589528-46589547 MS.gene042632:intron 15.0%
!!! GTTACTTGTATTTAAAATTA+AGG + chr5.2:46592513-46592532 MS.gene042632:intron 15.0%
!!! TCTTTTATAATTTTCTGATT+TGG - chr5.2:46592719-46592738 None:intergenic 15.0%
!!! TTATACTTTTTAAATGGTAA+TGG + chr5.2:46592382-46592401 MS.gene042632:intron 15.0%
!!! TTCAAAGTCTAAAATATTTT+TGG - chr5.2:46589831-46589850 None:intergenic 15.0%
!!! TTTGTGATTTTTAAAAATCA+GGG + chr5.2:46590189-46590208 MS.gene042632:intron 15.0%
!!! TTTTGTGATTTTTAAAAATC+AGG + chr5.2:46590188-46590207 MS.gene042632:intron 15.0%
!! AAAATGACAATCAAGATTTA+CGG - chr5.2:46589339-46589358 None:intergenic 20.0%
!! AATTACTATCTGGTAAATAA+TGG - chr5.2:46588617-46588636 None:intergenic 20.0%
!! CATTTATTTAATGATGTATG+TGG - chr5.2:46590936-46590955 None:intergenic 20.0%
!! GATTAATCATCATTAAATAG+TGG - chr5.2:46590132-46590151 None:intergenic 20.0%
!! TAAGCTTAAATTACTCATAA+AGG + chr5.2:46591497-46591516 MS.gene042632:intron 20.0%
!! TGGAAGATATTAAAAAATTG+AGG + chr5.2:46591063-46591082 MS.gene042632:intron 20.0%
!! TTTATATTCAAGACAATGTT+GGG + chr5.2:46590496-46590515 MS.gene042632:CDS 20.0%
!!! AAACTATTCATTTTCATGAA+TGG - chr5.2:46589277-46589296 None:intergenic 20.0%
!!! AAATATTTTATGAGAGTACA+TGG - chr5.2:46589109-46589128 None:intergenic 20.0%
!!! AAATGGATTTTTTATTTGAG+GGG + chr5.2:46589055-46589074 MS.gene042632:intron 20.0%
!!! AACTATTCATTTTCATGAAT+GGG - chr5.2:46589276-46589295 None:intergenic 20.0%
!!! AAGAGATTTAAAGATGATTT+TGG - chr5.2:46592138-46592157 None:intergenic 20.0%
!!! AATATTTTATGAGAGTACAT+GGG - chr5.2:46589108-46589127 None:intergenic 20.0%
!!! ACTCTTATTTTGGAAAAAAT+AGG + chr5.2:46591979-46591998 MS.gene042632:intron 20.0%
!!! ATAAGCAAAATTCACTTTTT+AGG + chr5.2:46590872-46590891 MS.gene042632:intron 20.0%
!!! GAAATGGATTTTTTATTTGA+GGG + chr5.2:46589054-46589073 MS.gene042632:intron 20.0%
!!! GATATATTTGGTTCATAATA+TGG + chr5.2:46590909-46590928 MS.gene042632:intron 20.0%
!!! TAGTAATGATTAGTTTTTGT+CGG - chr5.2:46592035-46592054 None:intergenic 20.0%
!!! TGAAATGGATTTTTTATTTG+AGG + chr5.2:46589053-46589072 MS.gene042632:intron 20.0%
!!! TTAATACAGATTTTTAGACA+AGG + chr5.2:46593105-46593124 MS.gene042632:intron 20.0%
!!! TTATTTTGGAAAAAATAGGT+TGG + chr5.2:46591983-46592002 MS.gene042632:intron 20.0%
!!! TTTTCCATATTTATTGAACT+GGG - chr5.2:46591894-46591913 None:intergenic 20.0%
!!! TTTTTCAAAATTATTAGCTG+CGG + chr5.2:46588275-46588294 MS.gene042632:intron 20.0%
!!! TTTTTCCATATTTATTGAAC+TGG - chr5.2:46591895-46591914 None:intergenic 20.0%
! AAAAAAAAATGTAAGGATGG+TGG - chr5.2:46589523-46589542 None:intergenic 25.0%
! AAACACTAGAATTGATGAAA+TGG + chr5.2:46589038-46589057 MS.gene042632:intron 25.0%
! AACTGTTTCCTTTAATCTTA+GGG - chr5.2:46592918-46592937 None:intergenic 25.0%
! AATCATACTAGAAGGAAAAA+AGG + chr5.2:46588044-46588063 MS.gene042632:CDS 25.0%
! AATTGTATTATACGTAAAGG+AGG - chr5.2:46589561-46589580 None:intergenic 25.0%
! AGAAAAAGCAATATTCGAAT+TGG + chr5.2:46588980-46588999 MS.gene042632:intron 25.0%
! AGAAGAAGAAAATTACTATC+TGG - chr5.2:46588627-46588646 None:intergenic 25.0%
! AGGAATTGAAATCAATAATC+AGG + chr5.2:46593200-46593219 MS.gene042632:CDS 25.0%
! AGGAATTGTATTATACGTAA+AGG - chr5.2:46589564-46589583 None:intergenic 25.0%
! AGTTATAATCACATGAATCT+TGG + chr5.2:46589599-46589618 MS.gene042632:intron 25.0%
! ATCTCAATAATTGCATTCAT+TGG + chr5.2:46590558-46590577 MS.gene042632:CDS 25.0%
! ATTAAACATATGTCATGTCA+TGG + chr5.2:46590021-46590040 MS.gene042632:intron 25.0%
! ATTGAAATCAATAATCAGGA+TGG + chr5.2:46593204-46593223 MS.gene042632:CDS 25.0%
! CAAAGCATACCAAAAATAAA+AGG - chr5.2:46588086-46588105 None:intergenic 25.0%
! CCTGATAATAATCTCAATAA+GGG + chr5.2:46593814-46593833 MS.gene042632:CDS 25.0%
! CTGATAATAATCTCAATAAG+GGG + chr5.2:46593815-46593834 MS.gene042632:CDS 25.0%
! GAAGAAGAAAAAAAAAACGA+GGG - chr5.2:46589436-46589455 None:intergenic 25.0%
! GATTATAACTCAATTGATGA+TGG - chr5.2:46589589-46589608 None:intergenic 25.0%
! GTTTATATTCAAGACAATGT+TGG + chr5.2:46590495-46590514 MS.gene042632:CDS 25.0%
! TAACTGTTTCCTTTAATCTT+AGG - chr5.2:46592919-46592938 None:intergenic 25.0%
! TAATCATCATTAAATAGTGG+TGG - chr5.2:46590129-46590148 None:intergenic 25.0%
! TATAGTAAACCTAATCTTTG+AGG - chr5.2:46589856-46589875 None:intergenic 25.0%
! TCCTGATAATAATCTCAATA+AGG + chr5.2:46593813-46593832 MS.gene042632:CDS 25.0%
! TGAAGAAGAAAAAAAAAACG+AGG - chr5.2:46589437-46589456 None:intergenic 25.0%
! TGATATAACAATGTAGAGTT+AGG - chr5.2:46590687-46590706 None:intergenic 25.0%
! TTGAAATCAATAATCAGGAT+GGG + chr5.2:46593205-46593224 MS.gene042632:CDS 25.0%
!! AATTGGTACTATTTTGTCAT+GGG + chr5.2:46590441-46590460 MS.gene042632:CDS 25.0%
!! AGATTTAAAGATGATTTTGG+TGG - chr5.2:46592135-46592154 None:intergenic 25.0%
!! CAAATTCGAATTCTTTTCTT+AGG - chr5.2:46591118-46591137 None:intergenic 25.0%
!! GAATTATATCAGTACACTTT+TGG + chr5.2:46593741-46593760 MS.gene042632:CDS 25.0%
!! TAATTGGTACTATTTTGTCA+TGG + chr5.2:46590440-46590459 MS.gene042632:CDS 25.0%
!!! ATTCGAATATTGCTTTTTCT+TGG - chr5.2:46588980-46588999 None:intergenic 25.0%
!!! TATGATTAGTTTGACTATGT+CGG + chr5.2:46590212-46590231 MS.gene042632:CDS 25.0%
!!! TCGTTTTTTTTTTCTTCTTC+AGG + chr5.2:46589436-46589455 MS.gene042632:intron 25.0%
!!! TGAGCAATTTGTTAAAAGTT+CGG + chr5.2:46591950-46591969 MS.gene042632:intron 25.0%
AAAACCATGATTCAAAACCA+TGG - chr5.2:46588336-46588355 None:intergenic 30.0%
AACTGTTATCCTCTTTATGA+TGG - chr5.2:46593942-46593961 None:intergenic 30.0%
AATTCAGATCCATCATAAAG+AGG + chr5.2:46593930-46593949 MS.gene042632:CDS 30.0%
ACTGTTTCCTTTAATCTTAG+GGG - chr5.2:46592917-46592936 None:intergenic 30.0%
AGAATGGTAATCATACTAGA+AGG + chr5.2:46588036-46588055 MS.gene042632:CDS 30.0%
AGTGATTAATTGTGCAAAGT+AGG + chr5.2:46591087-46591106 MS.gene042632:intron 30.0%
ATACTAGAAGGAAAAAAGGA+GGG + chr5.2:46588048-46588067 MS.gene042632:CDS 30.0%
ATATATTGTCCAAGCGATAA+AGG + chr5.2:46591915-46591934 MS.gene042632:intron 30.0%
ATATGAAAACACCAGACTTA+TGG + chr5.2:46593152-46593171 MS.gene042632:CDS 30.0%
ATCTGATTCATCGAATTGAT+CGG - chr5.2:46590388-46590407 None:intergenic 30.0%
ATGCATCAATAACATTAGGA+GGG + chr5.2:46590721-46590740 MS.gene042632:CDS 30.0%
ATTATTATCAGGAAGCCAAT+TGG - chr5.2:46593806-46593825 None:intergenic 30.0%
ATTGAGTTAATAAAGGCCTT+AGG + chr5.2:46591029-46591048 MS.gene042632:intron 30.0%
CCCTTATTGAGATTATTATC+AGG - chr5.2:46593817-46593836 None:intergenic 30.0%
CTTGATGCATCAATAACATT+AGG + chr5.2:46590717-46590736 MS.gene042632:CDS 30.0%
GAGTTAGTTATGATCACATA+GGG - chr5.2:46592895-46592914 None:intergenic 30.0%
TCAATAATTGCATTCATTGG+TGG + chr5.2:46590561-46590580 MS.gene042632:CDS 30.0%
TCATCCCAGTTCAATAAATA+TGG + chr5.2:46591887-46591906 MS.gene042632:intron 30.0%
TGATTAAACATGCTAAGCTA+TGG + chr5.2:46592860-46592879 MS.gene042632:intron 30.0%
TTCAGTGTAATTACAAGTGT+CGG - chr5.2:46588242-46588261 None:intergenic 30.0%
TTTGGACATCAATTTCTCTA+GGG + chr5.2:46593719-46593738 MS.gene042632:CDS 30.0%
! AGGTTATATTGAGTTGTAAC+TGG - chr5.2:46592945-46592964 None:intergenic 30.0%
! ATGGATCTGAATTTGCTTAT+AGG - chr5.2:46593923-46593942 None:intergenic 30.0%
! ATTCGAATTCTTTTCTTAGG+AGG - chr5.2:46591115-46591134 None:intergenic 30.0%
! ATTTTTAAACGTTAGCACGA+CGG - chr5.2:46592193-46592212 None:intergenic 30.0%
! CTGAAGCTTTTATGTCAATA+GGG + chr5.2:46593635-46593654 MS.gene042632:CDS 30.0%
! TTCATTTCTGATTCTTTTGC+TGG + chr5.2:46588565-46588584 MS.gene042632:CDS 30.0%
! TTCGAATTCTTTTCTTAGGA+GGG - chr5.2:46591114-46591133 None:intergenic 30.0%
! TTTTGGACATCAATTTCTCT+AGG + chr5.2:46593718-46593737 MS.gene042632:CDS 30.0%
!! AATTGGTGTTATAACCTAGT+TGG + chr5.2:46588997-46589016 MS.gene042632:intron 30.0%
!! ATTAAATAGTGGTGGATTCA+AGG - chr5.2:46590121-46590140 None:intergenic 30.0%
!! GAGGCTTTATTTATAACTTG+TGG + chr5.2:46591599-46591618 MS.gene042632:intron 30.0%
!! TAACTCAATTGATGATGGTA+AGG - chr5.2:46589584-46589603 None:intergenic 30.0%
!! TTTTATGTCAATAGGGCATT+TGG + chr5.2:46593642-46593661 MS.gene042632:CDS 30.0%
!!! ACATTGTTTTTTGGAAAGCT+AGG - chr5.2:46589724-46589743 None:intergenic 30.0%
!!! GCAACAATGCCTTTTATTTT+TGG + chr5.2:46588074-46588093 MS.gene042632:CDS 30.0%
!!! GGACATGGACTTATTTTAAT+TGG + chr5.2:46590424-46590443 MS.gene042632:CDS 30.0%
!!! TTGCTTATATTTTGAAACGG+AGG - chr5.2:46590860-46590879 None:intergenic 30.0%
AATGTAGAGTTAGGCACTTT+AGG - chr5.2:46590678-46590697 None:intergenic 35.0%
ACAATATAGCCTTCATGGAA+TGG + chr5.2:46593612-46593631 MS.gene042632:CDS 35.0%
ACTAACTCCCCTAAGATTAA+AGG + chr5.2:46592907-46592926 MS.gene042632:intron 35.0%
AGATAAACATTGCCAATGTG+GGG - chr5.2:46590542-46590561 None:intergenic 35.0%
AGATGAATAAGTGAGAAGTC+TGG + chr5.2:46589489-46589508 MS.gene042632:intron 35.0%
ATAAGCTTCCTTCACAGAAT+GGG + chr5.2:46593451-46593470 MS.gene042632:CDS 35.0%
ATATTCAAGACAATGTTGGG+TGG + chr5.2:46590499-46590518 MS.gene042632:CDS 35.0%
ATGATTCAAAACCATGGACA+CGG - chr5.2:46588330-46588349 None:intergenic 35.0%
ATTCCATGAAGGCTATATTG+TGG - chr5.2:46593613-46593632 None:intergenic 35.0%
ATTGCTGTAAACAACCAACT+AGG - chr5.2:46589014-46589033 None:intergenic 35.0%
ATTTCTCATGCTAGCTATGT+CGG + chr5.2:46591198-46591217 MS.gene042632:intron 35.0%
CAAACCAAAAAACAAGGACA+TGG + chr5.2:46590409-46590428 MS.gene042632:CDS 35.0%
CAAACTTAACTAAAACCTCG+AGG - chr5.2:46589638-46589657 None:intergenic 35.0%
CAGATCCAAACCAAAAAACA+AGG + chr5.2:46590403-46590422 MS.gene042632:CDS 35.0%
CATACTAGAAGGAAAAAAGG+AGG + chr5.2:46588047-46588066 MS.gene042632:CDS 35.0%
CGTTGAAATGAAACGAAAGA+AGG + chr5.2:46593519-46593538 MS.gene042632:CDS 35.0%
GACACTAGAATTAAAGACAG+TGG + chr5.2:46589786-46589805 MS.gene042632:intron 35.0%
GAGATAAACATTGCCAATGT+GGG - chr5.2:46590543-46590562 None:intergenic 35.0%
GATAAAACTCCTTTATCGCT+TGG - chr5.2:46591927-46591946 None:intergenic 35.0%
GATGCATCAATAACATTAGG+AGG + chr5.2:46590720-46590739 MS.gene042632:CDS 35.0%
GATGGTCTATGTCTTATCTA+TGG - chr5.2:46591769-46591788 None:intergenic 35.0%
GCAAGTTATCACAGATTACA+AGG - chr5.2:46592965-46592984 None:intergenic 35.0%
GGAGTTAGTTATGATCACAT+AGG - chr5.2:46592896-46592915 None:intergenic 35.0%
TAATCTCAATAAGGGGAAGT+TGG + chr5.2:46593822-46593841 MS.gene042632:CDS 35.0%
TACTTCAATGCTATGAAGCA+CGG + chr5.2:46588157-46588176 MS.gene042632:intron 35.0%
TATAAGCTTCCTTCACAGAA+TGG + chr5.2:46593450-46593469 MS.gene042632:CDS 35.0%
TATTCAAGACAATGTTGGGT+GGG + chr5.2:46590500-46590519 MS.gene042632:CDS 35.0%
TCGTAAATAGGAATGAGAGT+AGG - chr5.2:46591721-46591740 None:intergenic 35.0%
TGAGATAAACATTGCCAATG+TGG - chr5.2:46590544-46590563 None:intergenic 35.0%
TGTACTCATGTAGATGTTTG+AGG + chr5.2:46589976-46589995 MS.gene042632:intron 35.0%
TGTATTATACGTAAAGGAGG+AGG - chr5.2:46589558-46589577 None:intergenic 35.0%
TTCACGACAAAACAAAGTGA+TGG - chr5.2:46591787-46591806 None:intergenic 35.0%
TTGAGGGGATCTTGATTAAA+TGG + chr5.2:46589070-46589089 MS.gene042632:intron 35.0%
TTTCTTTCTTTCTACAAGCC+AGG - chr5.2:46589688-46589707 None:intergenic 35.0%
! ACTTTTACAAGTCGGGTAAA+CGG - chr5.2:46590624-46590643 None:intergenic 35.0%
! AGTTTTTGTCGGAGAACTTA+TGG - chr5.2:46592024-46592043 None:intergenic 35.0%
! CTGGTAAATAATGGAAGCAA+CGG - chr5.2:46588608-46588627 None:intergenic 35.0%
! CTTTGAAGACCTCAAAGATT+AGG + chr5.2:46589844-46589863 MS.gene042632:intron 35.0%
! GCTGAAGCTTTTATGTCAAT+AGG + chr5.2:46593634-46593653 MS.gene042632:CDS 35.0%
! GGAAGTTGGAATACTTTTAC+TGG + chr5.2:46593836-46593855 MS.gene042632:CDS 35.0%
! GTAACTCTTGTTGTACTCAT+GGG + chr5.2:46588829-46588848 MS.gene042632:intron 35.0%
! GTTTTTGTCGGAGAACTTAT+GGG - chr5.2:46592023-46592042 None:intergenic 35.0%
! TAACTCTTGTTGTACTCATG+GGG + chr5.2:46588830-46588849 MS.gene042632:intron 35.0%
! TAATCCCAATCTCAGTGTTT+TGG + chr5.2:46593581-46593600 MS.gene042632:CDS 35.0%
! TAGGTGTCTGTTCATAGTTT+TGG - chr5.2:46593302-46593321 None:intergenic 35.0%
! TGTAACTCTTGTTGTACTCA+TGG + chr5.2:46588828-46588847 MS.gene042632:intron 35.0%
! TTTACCCGACTTGTAAAAGT+GGG + chr5.2:46590624-46590643 MS.gene042632:CDS 35.0%
! TTTTTAAACGTTAGCACGAC+GGG - chr5.2:46592192-46592211 None:intergenic 35.0%
!! AAAGATGATTTTGGTGGTTG+TGG - chr5.2:46592129-46592148 None:intergenic 35.0%
!! GGAAGTATCAAAGAAGGTAA+AGG - chr5.2:46590839-46590858 None:intergenic 35.0%
!! GGATTTCGAATGATTTGGTT+AGG - chr5.2:46593321-46593340 None:intergenic 35.0%
!! TCGGTCTTTGACTCTTATTT+TGG + chr5.2:46591969-46591988 MS.gene042632:intron 35.0%
!!! AAGTCCATGTCCTTGTTTTT+TGG - chr5.2:46590416-46590435 None:intergenic 35.0%
!!! CATAGTTTTGGCTTGTTGAA+GGG - chr5.2:46593290-46593309 None:intergenic 35.0%
!!! CATGTCCTTGTTTTTTGGTT+TGG - chr5.2:46590411-46590430 None:intergenic 35.0%
!!! GTACTGCAATGGCATTTTTT+TGG + chr5.2:46593701-46593720 MS.gene042632:CDS 35.0%
!!! TCATAGTTTTGGCTTGTTGA+AGG - chr5.2:46593291-46593310 None:intergenic 35.0%
!!! TGTTTTTTGGAAAGCTAGGA+CGG - chr5.2:46589720-46589739 None:intergenic 35.0%
!!! TTTTGTTGTTGCAGCTAATG+AGG + chr5.2:46588399-46588418 MS.gene042632:intron 35.0%
AAATCATTCGAAATCCCAGC+AGG + chr5.2:46593325-46593344 MS.gene042632:CDS 40.0%
AACACTCTCACTAACTTTGG+TGG + chr5.2:46588511-46588530 MS.gene042632:CDS 40.0%
AATAGGAATGAGAGTAGGTC+AGG - chr5.2:46591716-46591735 None:intergenic 40.0%
AATCAGGATGGGACCAATAT+GGG + chr5.2:46593216-46593235 MS.gene042632:CDS 40.0%
AATCATTCGAAATCCCAGCA+GGG + chr5.2:46593326-46593345 MS.gene042632:CDS 40.0%
AATGAACTCCGAGGATTATG+TGG - chr5.2:46591181-46591200 None:intergenic 40.0%
ACAAGCCAAAACACTGAGAT+TGG - chr5.2:46593589-46593608 None:intergenic 40.0%
ATTCAAGACAATGTTGGGTG+GGG + chr5.2:46590501-46590520 MS.gene042632:CDS 40.0%
CAAGCCAAAACACTGAGATT+GGG - chr5.2:46593588-46593607 None:intergenic 40.0%
GAAACGAAAGAAGGTAGCTA+TGG + chr5.2:46593528-46593547 MS.gene042632:CDS 40.0%
GAGAACCTCTTTGCTTCTTT+CGG + chr5.2:46591739-46591758 MS.gene042632:intron 40.0%
GATTAAGACACGGTCATAGA+GGG - chr5.2:46593395-46593414 None:intergenic 40.0%
GCAAAGAGGTTCTCGTAAAT+AGG - chr5.2:46591733-46591752 None:intergenic 40.0%
GCTAACACTCTCACTAACTT+TGG + chr5.2:46588508-46588527 MS.gene042632:CDS 40.0%
GTCATGGCTTTCTCTATCAA+TGG + chr5.2:46590037-46590056 MS.gene042632:intron 40.0%
TAAGACCACCACCTTGTAAA+GGG + chr5.2:46590250-46590269 MS.gene042632:CDS 40.0%
TAATCAGGATGGGACCAATA+TGG + chr5.2:46593215-46593234 MS.gene042632:CDS 40.0%
TCACTTCTACTAAGTGCACT+CGG + chr5.2:46590324-46590343 MS.gene042632:CDS 40.0%
TGAAAACACCAGACTTATGG+AGG + chr5.2:46593155-46593174 MS.gene042632:CDS 40.0%
TGCAGTAAACTTGTGTACCA+AGG - chr5.2:46593770-46593789 None:intergenic 40.0%
TGCTGGGATTTCGAATGATT+TGG - chr5.2:46593326-46593345 None:intergenic 40.0%
TGGTACACAAGTTTACTGCA+GGG + chr5.2:46593770-46593789 MS.gene042632:CDS 40.0%
TGTGAAGGAAGCTTATACCA+CGG - chr5.2:46593447-46593466 None:intergenic 40.0%
TTAAGACCACCACCTTGTAA+AGG + chr5.2:46590249-46590268 MS.gene042632:CDS 40.0%
TTCAACGAATCCAGCAACAA+AGG - chr5.2:46593506-46593525 None:intergenic 40.0%
TTCCAATCATTGCTCACCTA+AGG - chr5.2:46591048-46591067 None:intergenic 40.0%
TTGAACTGGGATGAATAGAG+TGG - chr5.2:46591881-46591900 None:intergenic 40.0%
TTGGTACACAAGTTTACTGC+AGG + chr5.2:46593769-46593788 MS.gene042632:CDS 40.0%
! AACCCAAAAGTGTGCTGAAA+GGG + chr5.2:46592558-46592577 MS.gene042632:intron 40.0%
! CTTTTACAAGTCGGGTAAAC+GGG - chr5.2:46590623-46590642 None:intergenic 40.0%
! CTTTTTGCTACCTTTGTTGC+TGG + chr5.2:46593493-46593512 MS.gene042632:CDS 40.0%
! GAGTATGACAAGTACTGCAA+TGG + chr5.2:46593690-46593709 MS.gene042632:CDS 40.0%
! GGTTCAATCTTTTTACCTCG+AGG + chr5.2:46589620-46589639 MS.gene042632:intron 40.0%
! GTGTTAGCAGCTTTGGTTAA+TGG - chr5.2:46588496-46588515 None:intergenic 40.0%
! GTTTACCCGACTTGTAAAAG+TGG + chr5.2:46590623-46590642 MS.gene042632:CDS 40.0%
!! AACGGAGGAAGTATCAAAGA+AGG - chr5.2:46590845-46590864 None:intergenic 40.0%
!! CAGTACACTTTTGGTTACCT+TGG + chr5.2:46593750-46593769 MS.gene042632:CDS 40.0%
!! GAAATGAAAGCACCAAGCAA+TGG - chr5.2:46588553-46588572 None:intergenic 40.0%
!! TTGGTGGATATCGACTTTAC+CGG + chr5.2:46590577-46590596 MS.gene042632:CDS 40.0%
!!! GTGTCCATGGTTTTGAATCA+TGG + chr5.2:46588329-46588348 MS.gene042632:intron 40.0%
AACCAATGCCCATTCTGTGA+AGG - chr5.2:46593462-46593481 None:intergenic 45.0%
AACCTCTTTGCTTCTTTCGG+TGG + chr5.2:46591742-46591761 MS.gene042632:intron 45.0%
AACTCCGAGGATTATGTGGT+GGG - chr5.2:46591177-46591196 None:intergenic 45.0%
AAGAAGGTAGCTATGGAGCA+CGG + chr5.2:46593535-46593554 MS.gene042632:CDS 45.0%
AAGACCACCACCTTGTAAAG+GGG + chr5.2:46590251-46590270 MS.gene042632:CDS 45.0%
AAGATGTTCCTCACAGCACA+AGG + chr5.2:46588950-46588969 MS.gene042632:intron 45.0%
AAGCTTCAGCCATTCCATGA+AGG - chr5.2:46593624-46593643 None:intergenic 45.0%
AAGTTTACTGCAGGGCCTAA+TGG + chr5.2:46593778-46593797 MS.gene042632:CDS 45.0%
ACCTCTTTGCTTCTTTCGGT+GGG + chr5.2:46591743-46591762 MS.gene042632:intron 45.0%
ACTGAGAAGTTAGCAGTGGT+GGG + chr5.2:46588424-46588443 MS.gene042632:CDS 45.0%
ACTGGGATGAATAGAGTGGA+TGG - chr5.2:46591877-46591896 None:intergenic 45.0%
ACTTTACCGGAACTTGAACC+CGG + chr5.2:46590590-46590609 MS.gene042632:CDS 45.0%
AGAATGCCTGATGCCCATAT+TGG - chr5.2:46593232-46593251 None:intergenic 45.0%
AGATTAACTGGACTTGACCG+TGG + chr5.2:46593427-46593446 MS.gene042632:CDS 45.0%
AGCATGAGAAATGAACTCCG+AGG - chr5.2:46591190-46591209 None:intergenic 45.0%
ATCAACTGTTCACAGAGTGG+AGG + chr5.2:46593180-46593199 MS.gene042632:CDS 45.0%
ATCACAGCATATGCCCAACA+AGG + chr5.2:46593256-46593275 MS.gene042632:CDS 45.0%
ATGGGGTCGGGTTTATATAC+GGG + chr5.2:46588847-46588866 MS.gene042632:intron 45.0%
CAGTTAATCTACGAGCCACT+CGG - chr5.2:46593417-46593436 None:intergenic 45.0%
CATGGGAACAGCTATACTTG+TGG + chr5.2:46590458-46590477 MS.gene042632:CDS 45.0%
CATGGGGTCGGGTTTATATA+CGG + chr5.2:46588846-46588865 MS.gene042632:intron 45.0%
GCAGTACTTGTCATACTCTC+AGG - chr5.2:46593688-46593707 None:intergenic 45.0%
GCTATCAACTGTTCACAGAG+TGG + chr5.2:46593177-46593196 MS.gene042632:CDS 45.0%
GGAAGCCAATTGGTACCATT+AGG - chr5.2:46593796-46593815 None:intergenic 45.0%
GGATTAAGACACGGTCATAG+AGG - chr5.2:46593396-46593415 None:intergenic 45.0%
GGTTACTGAGAAGTTAGCAG+TGG + chr5.2:46588420-46588439 MS.gene042632:CDS 45.0%
GTGCCACAATATAGCCTTCA+TGG + chr5.2:46593607-46593626 MS.gene042632:CDS 45.0%
GTTGTGGTAAAGTCAAGGTG+CGG - chr5.2:46592113-46592132 None:intergenic 45.0%
TACTGAGAAGTTAGCAGTGG+TGG + chr5.2:46588423-46588442 MS.gene042632:CDS 45.0%
TATGAAGCACGGACACTTCT+CGG + chr5.2:46588168-46588187 MS.gene042632:intron 45.0%
TCAAGCTTGACACCATTGCT+TGG + chr5.2:46588538-46588557 MS.gene042632:CDS 45.0%
TCTACTAAGTGCACTCGGAT+CGG + chr5.2:46590329-46590348 MS.gene042632:CDS 45.0%
TGGATAGCACTAGAGACTAG+TGG - chr5.2:46591857-46591876 None:intergenic 45.0%
TGGTGGTTGTGGTAAAGTCA+AGG - chr5.2:46592118-46592137 None:intergenic 45.0%
TTCCTTCACAGAATGGGCAT+TGG + chr5.2:46593457-46593476 MS.gene042632:CDS 45.0%
! ACCCAAAAGTGTGCTGAAAG+GGG + chr5.2:46592559-46592578 MS.gene042632:intron 45.0%
! ACCCCTTTCAGCACACTTTT+GGG - chr5.2:46592563-46592582 None:intergenic 45.0%
! CAACCCAAAAGTGTGCTGAA+AGG + chr5.2:46592557-46592576 MS.gene042632:intron 45.0%
! CAAGGTGGTGGTCTTAATTG+TGG - chr5.2:46590246-46590265 None:intergenic 45.0%
! GCATGTGAAGCTGTGTTGTT+AGG - chr5.2:46588474-46588493 None:intergenic 45.0%
! TACCCCTTTCAGCACACTTT+TGG - chr5.2:46592564-46592583 None:intergenic 45.0%
! TAGGTCAGGTCGGTTTACAA+GGG - chr5.2:46591702-46591721 None:intergenic 45.0%
! TCTTGTTGTACTCATGGGGT+CGG + chr5.2:46588834-46588853 MS.gene042632:intron 45.0%
!! AAGGGAGAAAGTGCCTTGTT+GGG - chr5.2:46593272-46593291 None:intergenic 45.0%
!! AGTGAGAGTGTTAGCAGCTT+TGG - chr5.2:46588503-46588522 None:intergenic 45.0%
!! CAATGGTGAAGAGCATTGTG+AGG - chr5.2:46593372-46593391 None:intergenic 45.0%
!! CACACCCACTTTTACAAGTC+GGG - chr5.2:46590631-46590650 None:intergenic 45.0%
!! CCACACCCACTTTTACAAGT+CGG - chr5.2:46590632-46590651 None:intergenic 45.0%
!! CTTTCAGCACACTTTTGGGT+TGG - chr5.2:46592559-46592578 None:intergenic 45.0%
!! GTTGATAGCCTCCATAAGTC+TGG - chr5.2:46593166-46593185 None:intergenic 45.0%
!!! AAAAAAAAAAACTTTTTTTT+TGG + chr5.2:46589227-46589246 MS.gene042632:intron 5.0%
!!! AAAAAAAAAACTTTTTTTTT+GGG + chr5.2:46589228-46589247 MS.gene042632:intron 5.0%
!!! TATTTTTTATTATGAAATTT+TGG + chr5.2:46592222-46592241 MS.gene042632:intron 5.0%
!!! TTATTTTCTTAAAAAAAAAT+CGG - chr5.2:46589144-46589163 None:intergenic 5.0%
AAAACCATGGACACGGACAC+CGG - chr5.2:46588323-46588342 None:intergenic 50.0%
AAGACAATGTTGGGTGGGGA+TGG + chr5.2:46590505-46590524 MS.gene042632:CDS 50.0%
ACTCCGAGGATTATGTGGTG+GGG - chr5.2:46591176-46591195 None:intergenic 50.0%
AGACAATGTTGGGTGGGGAT+GGG + chr5.2:46590506-46590525 MS.gene042632:CDS 50.0%
ATGGGACCAATATGGGCATC+AGG + chr5.2:46593223-46593242 MS.gene042632:CDS 50.0%
CAAGGCAGCAATAGTGACAG+AGG + chr5.2:46593123-46593142 MS.gene042632:CDS 50.0%
CAAGGTGCGGAGAGATATAG+AGG - chr5.2:46592100-46592119 None:intergenic 50.0%
CAGGGCCTAATGGTACCAAT+TGG + chr5.2:46593788-46593807 MS.gene042632:CDS 50.0%
CATACCTCCTCCCCTTTACA+AGG - chr5.2:46590264-46590283 None:intergenic 50.0%
CGAGTGGCTCGTAGATTAAC+TGG + chr5.2:46593415-46593434 MS.gene042632:CDS 50.0%
CTACTAAGTGCACTCGGATC+GGG + chr5.2:46590330-46590349 MS.gene042632:CDS 50.0%
GAACTCCGAGGATTATGTGG+TGG - chr5.2:46591178-46591197 None:intergenic 50.0%
GAGCCACTCGGATTAAGACA+CGG - chr5.2:46593405-46593424 None:intergenic 50.0%
GAGGATGGTGAATACCGACA+TGG - chr5.2:46593353-46593372 None:intergenic 50.0%
GGAATGAGAGTAGGTCAGGT+CGG - chr5.2:46591712-46591731 None:intergenic 50.0%
GGCCTTAGGTGAGCAATGAT+TGG + chr5.2:46591043-46591062 MS.gene042632:intron 50.0%
GTATGCCAGGAAGCTAGTAC+AGG + chr5.2:46590279-46590298 MS.gene042632:CDS 50.0%
TCACCCCACCACATAATCCT+CGG + chr5.2:46591170-46591189 MS.gene042632:intron 50.0%
TGACCGTGTCTTAATCCGAG+TGG + chr5.2:46593399-46593418 MS.gene042632:CDS 50.0%
TTGCCAATGTGGGGATTCCA+AGG - chr5.2:46590533-46590552 None:intergenic 50.0%
! CCGACTTGTAAAAGTGGGTG+TGG + chr5.2:46590629-46590648 MS.gene042632:CDS 50.0%
! CTTGTTGTACTCATGGGGTC+GGG + chr5.2:46588835-46588854 MS.gene042632:intron 50.0%
! GTAGGTCAGGTCGGTTTACA+AGG - chr5.2:46591703-46591722 None:intergenic 50.0%
! GTTGTCCTGTACTAGCTTCC+TGG - chr5.2:46590287-46590306 None:intergenic 50.0%
! TGTCGGTGTCTTGTCAGTGT+CGG - chr5.2:46588225-46588244 None:intergenic 50.0%
! TTCCTTCCGGGTTCAAGTTC+CGG - chr5.2:46590599-46590618 None:intergenic 50.0%
!! GAAGGGAGAAAGTGCCTTGT+TGG - chr5.2:46593273-46593292 None:intergenic 50.0%
!! GGTGAAGAGCATTGTGAGGA+TGG - chr5.2:46593368-46593387 None:intergenic 50.0%
!!! GTGTGGCTGCTTTTCGTAAG+AGG + chr5.2:46590646-46590665 MS.gene042632:CDS 50.0%
AAACGTTAGCACGACGGGCA+CGG - chr5.2:46592187-46592206 None:intergenic 55.0%
AATACCGACATGGACCCTGC+TGG - chr5.2:46593343-46593362 None:intergenic 55.0%
AATCCCAGCAGGGTCCATGT+CGG + chr5.2:46593336-46593355 MS.gene042632:CDS 55.0%
ACCACCACCTTGTAAAGGGG+AGG + chr5.2:46590254-46590273 MS.gene042632:CDS 55.0%
ACCACCTTGTAAAGGGGAGG+AGG + chr5.2:46590257-46590276 MS.gene042632:CDS 55.0%
ACCTCCTCCCCTTTACAAGG+TGG - chr5.2:46590261-46590280 None:intergenic 55.0%
ATACCGACATGGACCCTGCT+GGG - chr5.2:46593342-46593361 None:intergenic 55.0%
GACAATGTTGGGTGGGGATG+GGG + chr5.2:46590507-46590526 MS.gene042632:CDS 55.0%
GACACGGTCATAGAGGGCAA+TGG - chr5.2:46593389-46593408 None:intergenic 55.0%
GCCCACCGAAAGAAGCAAAG+AGG - chr5.2:46591747-46591766 None:intergenic 55.0%
TAAGTGCACTCGGATCGGGT+GGG + chr5.2:46590334-46590353 MS.gene042632:CDS 55.0%
TACCGGAACTTGAACCCGGA+AGG + chr5.2:46590594-46590613 MS.gene042632:CDS 55.0%
TCCTCCCCTTTACAAGGTGG+TGG - chr5.2:46590258-46590277 None:intergenic 55.0%
TTGGCACACCTTGTGCTGTG+AGG - chr5.2:46588961-46588980 None:intergenic 55.0%
! TAAAGGGGAGGAGGTATGCC+AGG + chr5.2:46590266-46590285 MS.gene042632:CDS 55.0%
CAAACGCTACCACGCAGGGT+CGG - chr5.2:46590362-46590381 None:intergenic 60.0%
CTAAGTGCACTCGGATCGGG+TGG + chr5.2:46590333-46590352 MS.gene042632:CDS 60.0%
GCACGGACACTTCTCGGACT+AGG + chr5.2:46588174-46588193 MS.gene042632:intron 60.0%
GCTCCAAACGCTACCACGCA+GGG - chr5.2:46590366-46590385 None:intergenic 60.0%
GGGCCTTGGAATCCCCACAT+TGG + chr5.2:46590527-46590546 MS.gene042632:CDS 60.0%
GTCAGTGTCCGTGTCGTGTC+CGG + chr5.2:46588301-46588320 MS.gene042632:intron 60.0%
! CGGGTAAACGGGCTTCCTTC+CGG - chr5.2:46590612-46590631 None:intergenic 60.0%
! GGGTAAACGGGCTTCCTTCC+GGG - chr5.2:46590611-46590630 None:intergenic 60.0%
CACGGACACCGGACACGACA+CGG - chr5.2:46588312-46588331 None:intergenic 65.0%
CGGACGCGACACGTGCAACT+GGG - chr5.2:46588205-46588224 None:intergenic 65.0%
GGCTCCAAACGCTACCACGC+AGG - chr5.2:46590367-46590386 None:intergenic 65.0%
GTGTCCGGTGTCCGTGTCCA+TGG + chr5.2:46588316-46588335 MS.gene042632:intron 65.0%
TCGGACGCGACACGTGCAAC+TGG - chr5.2:46588206-46588225 None:intergenic 65.0%
! CGACCCTGCGTGGTAGCGTT+TGG + chr5.2:46590360-46590379 MS.gene042632:CDS 65.0%
GTTGGGTGGGGATGGGGCCT+TGG + chr5.2:46590513-46590532 MS.gene042632:CDS 70.0%
GGGTGGGATCCGACCCTGCG+TGG + chr5.2:46590350-46590369 MS.gene042632:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 46588029 46594002 46588029 ID=MS.gene042632
chr5.2 mRNA 46588029 46594002 46588029 ID=MS.gene042632.t1;Parent=MS.gene042632
chr5.2 exon 46588029 46588095 46588029 ID=MS.gene042632.t1.exon1;Parent=MS.gene042632.t1
chr5.2 CDS 46588029 46588095 46588029 ID=cds.MS.gene042632.t1;Parent=MS.gene042632.t1
chr5.2 exon 46588413 46588630 46588413 ID=MS.gene042632.t1.exon2;Parent=MS.gene042632.t1
chr5.2 CDS 46588413 46588630 46588413 ID=cds.MS.gene042632.t1;Parent=MS.gene042632.t1
chr5.2 exon 46590210 46590769 46590210 ID=MS.gene042632.t1.exon3;Parent=MS.gene042632.t1
chr5.2 CDS 46590210 46590769 46590210 ID=cds.MS.gene042632.t1;Parent=MS.gene042632.t1
chr5.2 exon 46593114 46594002 46593114 ID=MS.gene042632.t1.exon4;Parent=MS.gene042632.t1
chr5.2 CDS 46593114 46594002 46593114 ID=cds.MS.gene042632.t1;Parent=MS.gene042632.t1
Gene Sequence

>MS.gene042632

ATGGAGAAGAATGGTAATCATACTAGAAGGAAAAAAGGAGGGCTTGCAACAATGCCTTTTATTTTTGGTATGCTTTGAAACCCTAACTCTTTTATATTAAATTTTAGACATTTTTGTAACTCATATTTTACTTCAATGCTATGAAGCACGGACACTTCTCGGACTAGGCGAGTCCCAGTTGCACGTGTCGCGTCCGACACTGACAAGACACCGACACTTGTAATTACACTGAATTATATGATTTTTTTTTTCAAAATTATTAGCTGCGGCGTGTCAGTGTCCGTGTCGTGTCCGGTGTCCGTGTCCATGGTTTTGAATCATGGTTTTGTATTAGATAGTAAACTATAGAAATATTAATGTTGATTTAATTTTTTGTTGTTGCAGCTAATGAGGTTACTGAGAAGTTAGCAGTGGTGGGTTTCAATGCAAACATGATAAGCTACCTAACAACACAGCTTCACATGCCATTAACCAAAGCTGCTAACACTCTCACTAACTTTGGTGGAACTTCAAGCTTGACACCATTGCTTGGTGCTTTCATTTCTGATTCTTTTGCTGGAAAATTCATGACTATTACCGTTGCTTCCATTATTTACCAGATAGTAATTTTCTTCTTCTAATCAACAATAATGATTTTCCTTCTTTATTATGATTTTACATTAACAAGTTTTCTCTTGTTGAAGATTGATTGAAATTATATTTACACTTTAAAACAAGAAATATTAATAATGATCAAATCATGTGATATTTTTGTGAATAATTTTATAAAATAGAATAAAATTATTTGATTGATAATAATTGTAACTCTTGTTGTACTCATGGGGTCGGGTTTATATACGGGAAAGATAAAAATTGTGCATTTTTATATTCAAATTGTTTTTTTTTTTAACAAACCAAAATGAATTTTATATTAAACGACAAAAGATGTTCCTCACAGCACAAGGTGTGCCAAGAAAAAGCAATATTCGAATTGGTGTTATAACCTAGTTGGTTGTTTACAGCAATGTTAAAACACTAGAATTGATGAAATGGATTTTTTATTTGAGGGGATCTTGATTAAATGGATTGATGTAGATCCCATGTACTCTCATAAAATATTTTGCTTATAAAAACCGATTTTTTTTTAAGAAAATAAAAAATCAAACATGTTTTAATATATGAATTCAGTTAGAATTGATATTATATAACTATTCTTAAAAAAAAAAAAAACTTTTTTTTTGGGTACAATGATATAAAGAATCTTACCCATTCATGAAAATGAATAGTTTTTTTTTTCATGGTTAAAATGAATAGTAAATAGATATGCACCGTAAATCTTGATTGTCATTTTTTTATTACAGAAGTTACTAAACTTTTATTTCAATAAAATAAATTACAAAACTTTTAGTGAAATTTTAAACAATGCCCTCGTTTTTTTTTTCTTCTTCAGGTAGTCTAATAACTATAATTTCACTTGTTTAAGATGAATAAGTGAGAAGTCTGGTGTTCAAACCACCATCCTTACATTTTTTTTTATTTGAGGAAAACCTCCTCCTTTACGTATAATACAATTCCTTACCATCATCAATTGAGTTATAATCACATGAATCTTGGTTCAATCTTTTTACCTCGAGGTTTTAGTTAAGTTTGCCTATTGCGTATATAATAATATATTGTCCTGGCTTGTAGAAAGAAAGAAAAAAATAATACCGTCCTAGCTTTCCAAAAAACAATGTAATTAATAAAATTAGCTAGTTGTTTACATGAGTATTGTCTTTGACACTAGAATTAAAGACAGTGGTAATTCTTTAAAGTTTTGTCCAAAAATATTTTAGACTTTGAAGACCTCAAAGATTAGGTTTACTATACTAAATTGAAGTTAAAAAAATGAATAAATATTTTAATAGAATTATGCGCAGACATAAATGAATCATAATAGTATGCTTTTTTTTGTTGTTGAAAATAGTATGTACTCATGTAGATGTTTGAGGATATATTTTGTTTGTGCAATGCATTAAACATATGTCATGTCATGGCTTTCTCTATCAATGGAATGTGTACATACGTATGATTATTGAAGCCATTTTTTTTAATATGTATGTTATAAACACCTTGAATCCACCACTATTTAATGATGATTAATCCTTATTGAAAGATTTTTTATTCTAAGCTGTCGAAATTTTTGTGATTTTTAAAAATCAGGGTATGATTAGTTTGACTATGTCGGCGATACTTCCACAATTAAGACCACCACCTTGTAAAGGGGAGGAGGTATGCCAGGAAGCTAGTACAGGACAACTCGCTATTCTATATGCGTCACTTCTACTAAGTGCACTCGGATCGGGTGGGATCCGACCCTGCGTGGTAGCGTTTGGAGCCGATCAATTCGATGAATCAGATCCAAACCAAAAAACAAGGACATGGACTTATTTTAATTGGTACTATTTTGTCATGGGAACAGCTATACTTGTGGCTGTGACTGTTCTAGTTTATATTCAAGACAATGTTGGGTGGGGATGGGGCCTTGGAATCCCCACATTGGCAATGTTTATCTCAATAATTGCATTCATTGGTGGATATCGACTTTACCGGAACTTGAACCCGGAAGGAAGCCCGTTTACCCGACTTGTAAAAGTGGGTGTGGCTGCTTTTCGTAAGAGGAAGATACCTAAAGTGCCTAACTCTACATTGTTATATCAAAATGATGAACTTGATGCATCAATAACATTAGGAGGGAAGCTGCTTCATTCTGATCAGTTAAAGTAAGTATAGTAATTAATTAATTTATGTATCTCTTATCTTTTCCTTTCATAATGTTTTTTAATACACCTTTACCTTCTTTGATACTTCCTCCGTTTCAAAATATAAGCAAAATTCACTTTTTAGGTTCATTCATTTAATGATATATTTGGTTCATAATATGGACCACATACATCATTAAATAAATGAACCTAAAAAGTGAATTTTATTTATATTTTGAAACAGAGCGAGTATAAAGCATATCATATGAGTGTTTCAATAATTGAGTTAATAAAGGCCTTAGGTGAGCAATGATTGGAAGATATTAAAAAATTGAGGAAGTGATTAATTGTGCAAAGTAGGACCCTCCTAAGAAAAGAATTCGAATTTGATTTTTACAAACACACATCTTGAAGATTAGTCTCACCCCACCACATAATCCTCGGAGTTCATTTCTCATGCTAGCTATGTCGGTTAAAAAGCTAACATTTTTAAAAAAGTTATTTCATATCAAATCTTTAAATTCGGTTAAAAAGCTAACATCTTTAAAAAAGTTATTTCATATCAAATCTTTAGATAAGAAATATAATATAAATTTAATTAGACTATCAAACTAATATATATCAATGAAATTAGTCTTTTTTATACTCAACATGAATTTTTAGAGAATGTTACTCTATATTATTTCATATTTCAATTGTAATGTATACTAATATATTTAAATATACAAAAAAAATTAGTGTAAATTAATAAGCTTAAATTACTCATAAAGGTTAATGAATTTATAATTTAATTCAAAGTACATAATATAATATAATAATATTTAAAATAATTAATATATTTATTTAAGTAGAGGCTTTATTTATAACTTGTGGTTTGATTTTTTGTTTTTTTTTACTAAATAAGCTTTGAAAAATTTGTAAATATGATTTATTATAGACTAAGTTGCAGACCCTTGTAAACCGACCTGACCTACTCTCATTCCTATTTACGAGAACCTCTTTGCTTCTTTCGGTGGGCCATAGATAAGACATAGACCATCACTTTGTTTTGTCGTGAACTATGAGCCAAATTAATCATCATTATTATAGTAGCAATTTACACACACCACTAGTCTCTAGTGCTATCCATCCACTCTATTCATCCCAGTTCAATAAATATGGAAAAAATATATTGTCCAAGCGATAAAGGAGTTTTATCTCTTGAGCAATTTGTTAAAAGTTCGGTCTTTGACTCTTATTTTGGAAAAAATAGGTTGGAAGAGAAAAATTATCCCATAAGTTCTCCGACAAAAACTAATCATTACTAAAAATATGGTAAAAATATAAAATCTAGAAAACAAACACTCAACCTCTATATCTCTCCGCACCTTGACTTTACCACAACCACCAAAATCATCTTTAAATCTCTTATATATACTAGCAAAAAAAGGGCACTCCGTGCCCGTCGTGCTAACGTTTAAAAATTATGAACAGTATTTTTTATTATGAAATTTTGGTTTTGATTAAAAGTAAAAATATGAATATTTGTTGCTTTTTTTAATGACACGAACAACAATCTTTATTATAGAAAAAGTTGTTTAAGAGTATAATTGGAATAATGAAAAAGTAAGTATAAATATATTTATCTAGTTTGTTATACTTTTTAAATGGTAATGGAAAATATATATATATATATATATATATATATATATATATATATATTCATATCGTGTTTGTTACATTTGTTTTAATATTTAAATTTATTCTTATCTATTTCTTACTTGTGTTACTTGTATTTAAAATTAAGGGTATTTTTAGAAAGAAAATTCCAACCCAAAAGTGTGCTGAAAGGGGTAGTTTCCTTTATATATAGTATAGATATAGATACATTCGTATAAGTAGTTAAATGAAAGTCTAATTTTAAAATACATACTGTATCAAACTATCATACACAATCGTCACTATTAAAAATGTTGAAATAGTGTTAACCAAATCAGAAAATTATAAAAGATAAAAAAAAAAAAAAAAAAAAAAGAGTGTGTGAGAGAAATTATAGTGTGAATTGTAATATTGTATTGAATTTTAACATAATGAACTAATGTACAAGCTTGCAAGTATTCATACTTAATCTATGATTAAACATGCTAAGCTATGGTGTGATCAACCCTATGTGATCATAACTAACTCCCCTAAGATTAAAGGAAACAGTTACAACCAGTTACAACTCAATATAACCTTGTAATCTGTGATAACTTGCTGCACAAGTTAGTGTAGTTTATGTCGTTCTTCCTCTATTTTTTCAATTAAACTTTTTCATACAGCCTTGTTTAAAGTTATTGTAATATTGTATAAATGATCTCAAGATTATAAACTGATTTTAATACAGATTTTTAGACAAGGCAGCAATAGTGACAGAGGAAGACAATATGAAAACACCAGACTTATGGAGGCTATCAACTGTTCACAGAGTGGAGGAATTGAAATCAATAATCAGGATGGGACCAATATGGGCATCAGGCATTCTTCTAATCACAGCATATGCCCAACAAGGCACTTTCTCCCTTCAACAAGCCAAAACTATGAACAGACACCTAACCAAATCATTCGAAATCCCAGCAGGGTCCATGTCGGTATTCACCATCCTCACAATGCTCTTCACCATTGCCCTCTATGACCGTGTCTTAATCCGAGTGGCTCGTAGATTAACTGGACTTGACCGTGGTATAAGCTTCCTTCACAGAATGGGCATTGGTTTTGTGATCTCACTTTTTGCTACCTTTGTTGCTGGATTCGTTGAAATGAAACGAAAGAAGGTAGCTATGGAGCACGGACTCGTTGAACACTCTAGTGAAATAATCCCAATCTCAGTGTTTTGGCTTGTGCCACAATATAGCCTTCATGGAATGGCTGAAGCTTTTATGTCAATAGGGCATTTGGAGTTTTTCTATGATCAAGCTCCTGAGAGTATGACAAGTACTGCAATGGCATTTTTTTGGACATCAATTTCTCTAGGGAATTATATCAGTACACTTTTGGTTACCTTGGTACACAAGTTTACTGCAGGGCCTAATGGTACCAATTGGCTTCCTGATAATAATCTCAATAAGGGGAAGTTGGAATACTTTTACTGGCTAATCACACTCTTGCAGTTTTTTAATCTCATTTACTACTTGATTTGTGCTAAAATGTACACCTATAAGCAAATTCAGATCCATCATAAAGAGGATAACAGTTCAGAAGACAACAATATTGAGCTTGCTAGTACTACAGTTTAA
Protein sequence

>MS.gene042632.t1

MEKNGNHTRRKKGGLATMPFIFANEVTEKLAVVGFNANMISYLTTQLHMPLTKAANTLTNFGGTSSLTPLLGAFISDSFAGKFMTITVASIIYQIGMISLTMSAILPQLRPPPCKGEEVCQEASTGQLAILYASLLLSALGSGGIRPCVVAFGADQFDESDPNQKTRTWTYFNWYYFVMGTAILVAVTVLVYIQDNVGWGWGLGIPTLAMFISIIAFIGGYRLYRNLNPEGSPFTRLVKVGVAAFRKRKIPKVPNSTLLYQNDELDASITLGGKLLHSDQLKFLDKAAIVTEEDNMKTPDLWRLSTVHRVEELKSIIRMGPIWASGILLITAYAQQGTFSLQQAKTMNRHLTKSFEIPAGSMSVFTILTMLFTIALYDRVLIRVARRLTGLDRGISFLHRMGIGFVISLFATFVAGFVEMKRKKVAMEHGLVEHSSEIIPISVFWLVPQYSLHGMAEAFMSIGHLEFFYDQAPESMTSTAMAFFWTSISLGNYISTLLVTLVHKFTAGPNGTNWLPDNNLNKGKLEYFYWLITLLQFFNLIYYLICAKMYTYKQIQIHHKEDNSSEDNNIELASTTV