AlfalfaGEDB | MS.gene60236

M. sativa cultivar XinJiangDaYe / MS.gene60236

KEGG: -
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00854.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60236.t1	XP_013454684.1	97.4	537	14	0	1	537	65	601	6.80E-302	1045.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60236.t1	Q9M817	54.7	543	236	6	4	536	57	599	8.8e-173	608.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60236.t1	A0A072US59	97.4	537	14	0	1	537	65	601	4.9e-302	1045.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene85128	MS.gene60236	PPI
MS.gene48607	MS.gene60236	PPI
MS.gene072108	MS.gene60236	PPI
MS.gene023238	MS.gene60236	PPI
MS.gene63175	MS.gene60236	PPI
MS.gene60236	MS.gene043167	PPI
MS.gene069358	MS.gene60236	PPI
MS.gene037668	MS.gene60236	PPI
MS.gene60236	MS.gene023241	PPI
MS.gene59045	MS.gene60236	PPI
MS.gene60236	MS.gene47798	PPI
MS.gene51032	MS.gene60236	PPI
MS.gene60236	MS.gene23175	PPI
MS.gene85126	MS.gene60236	PPI
MS.gene48611	MS.gene60236	PPI
MS.gene023088	MS.gene60236	PPI
MS.gene71923	MS.gene60236	PPI
MS.gene93925	MS.gene60236	PPI
MS.gene36331	MS.gene60236	PPI
MS.gene41062	MS.gene60236	PPI
MS.gene80997	MS.gene60236	PPI
MS.gene45440	MS.gene60236	PPI
MS.gene60236	MS.gene89274	PPI
MS.gene36330	MS.gene60236	PPI
MS.gene60236	MS.gene011513	PPI
MS.gene61500	MS.gene60236	PPI
MS.gene21479	MS.gene60236	PPI
MS.gene94247	MS.gene60236	PPI
MS.gene60236	MS.gene036797	PPI
MS.gene60236	MS.gene062539	PPI
MS.gene91646	MS.gene60236	PPI
MS.gene85124	MS.gene60236	PPI
MS.gene09964	MS.gene60236	PPI
MS.gene060422	MS.gene60236	PPI
MS.gene60236	MS.gene066294	PPI
MS.gene48608	MS.gene60236	PPI
MS.gene60236	MS.gene025801	PPI
MS.gene47799	MS.gene60236	PPI
MS.gene34769	MS.gene60236	PPI
MS.gene97221	MS.gene60236	PPI
MS.gene93924	MS.gene60236	PPI
MS.gene36328	MS.gene60236	PPI
MS.gene60236	MS.gene025799	PPI
MS.gene76514	MS.gene60236	PPI
MS.gene60236	MS.gene015321	PPI
MS.gene00573	MS.gene60236	PPI
MS.gene47803	MS.gene60236	PPI
MS.gene60236	MS.gene25379	PPI
MS.gene015450	MS.gene60236	PPI
MS.gene62883	MS.gene60236	PPI
MS.gene000889	MS.gene60236	PPI
MS.gene09666	MS.gene60236	PPI
MS.gene62424	MS.gene60236	PPI
MS.gene034047	MS.gene60236	PPI
MS.gene62577	MS.gene60236	PPI
MS.gene60236	MS.gene08380	PPI
MS.gene59687	MS.gene60236	PPI
MS.gene08386	MS.gene60236	PPI
MS.gene97858	MS.gene60236	PPI
MS.gene49588	MS.gene60236	PPI
MS.gene043168	MS.gene60236	PPI
MS.gene99020	MS.gene60236	PPI
MS.gene60236	MS.gene053889	PPI
MS.gene79483	MS.gene60236	PPI
MS.gene034782	MS.gene60236	PPI
MS.gene60236	MS.gene057996	PPI
MS.gene60236	MS.gene56842	PPI
MS.gene59046	MS.gene60236	PPI
MS.gene60236	MS.gene026792	PPI
MS.gene010998	MS.gene60236	PPI
MS.gene54408	MS.gene60236	PPI
MS.gene76508	MS.gene60236	PPI
MS.gene09962	MS.gene60236	PPI
MS.gene033170	MS.gene60236	PPI
MS.gene60236	MS.gene48605	PPI
MS.gene60236	MS.gene76510	PPI
MS.gene46070	MS.gene60236	PPI
MS.gene46358	MS.gene60236	PPI
MS.gene60236	MS.gene055163	PPI
MS.gene60236	MS.gene76513	PPI
MS.gene60236	MS.gene011636	PPI
MS.gene60236	MS.gene057470	PPI
MS.gene34999	MS.gene60236	PPI
MS.gene021879	MS.gene60236	PPI
MS.gene60236	MS.gene028221	PPI
MS.gene36327	MS.gene60236	PPI
MS.gene033172	MS.gene60236	PPI
MS.gene47798	MS.gene60236	PPI
MS.gene047248	MS.gene60236	PPI
MS.gene60236	MS.gene033171	PPI
MS.gene60236	MS.gene34999	PPI
MS.gene89274	MS.gene60236	PPI
MS.gene45920	MS.gene60236	PPI
MS.gene60236	MS.gene59045	PPI
MS.gene040288	MS.gene60236	PPI
MS.gene043163	MS.gene60236	PPI
MS.gene60236	MS.gene51033	PPI
MS.gene76513	MS.gene60236	PPI
MS.gene60236	MS.gene34993	PPI
MS.gene21160	MS.gene60236	PPI
MS.gene97223	MS.gene60236	PPI
MS.gene042632	MS.gene60236	PPI
MS.gene21157	MS.gene60236	PPI
MS.gene85129	MS.gene60236	PPI
MS.gene60236	MS.gene059682	PPI
MS.gene60236	MS.gene47801	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60236.t1	MTR_4g011280	97.393	537	14	0	1	537	65	601	0.0	1084
MS.gene60236.t1	MTR_2g101640	71.670	533	147	2	1	529	56	588	0.0	806
MS.gene60236.t1	MTR_2g101590	71.538	520	146	1	1	518	59	578	0.0	764
MS.gene60236.t1	MTR_2g101610	70.577	520	151	1	1	518	60	579	0.0	756
MS.gene60236.t1	MTR_2g101560	68.352	534	164	2	1	529	60	593	0.0	729
MS.gene60236.t1	MTR_1g057460	67.510	514	150	3	1	514	77	573	0.0	712
MS.gene60236.t1	MTR_1g057460	67.510	514	150	3	1	514	6	502	0.0	711
MS.gene60236.t1	MTR_0236s0050	67.899	514	148	4	1	514	6	502	0.0	694
MS.gene60236.t1	MTR_2g101650	59.847	523	206	4	4	524	60	580	0.0	669
MS.gene60236.t1	MTR_8g103233	49.630	540	259	8	1	537	50	579	0.0	522
MS.gene60236.t1	MTR_1g009200	49.807	518	251	6	4	518	63	574	9.84e-170	493
MS.gene60236.t1	MTR_1g026740	48.031	508	255	5	4	507	53	555	3.94e-169	491
MS.gene60236.t1	MTR_1g026750	47.601	521	262	6	4	518	54	569	3.11e-163	476
MS.gene60236.t1	MTR_1g026770	46.796	515	264	6	4	514	51	559	1.55e-159	466
MS.gene60236.t1	MTR_8g469480	37.736	530	310	9	5	520	73	596	1.67e-122	372
MS.gene60236.t1	MTR_4g107510	37.695	512	307	9	4	505	72	581	4.41e-120	366
MS.gene60236.t1	MTR_5g038060	36.147	545	323	11	3	534	66	598	6.81e-120	366
MS.gene60236.t1	MTR_4g107580	36.452	513	313	8	4	505	60	570	1.43e-117	360
MS.gene60236.t1	MTR_5g055000	38.356	511	297	10	5	505	55	557	3.08e-117	358
MS.gene60236.t1	MTR_4g107530	35.361	526	328	9	4	519	69	592	1.68e-110	342
MS.gene60236.t1	MTR_7g088790	34.972	529	325	11	5	521	66	587	1.04e-106	332
MS.gene60236.t1	MTR_5g038190	33.981	515	324	10	1	505	57	565	2.12e-103	322
MS.gene60236.t1	MTR_8g469470	34.875	519	319	10	1	505	65	578	1.83e-101	318
MS.gene60236.t1	MTR_7g088825	31.810	547	349	13	5	535	59	597	2.32e-101	318
MS.gene60236.t1	MTR_1g009170	41.475	434	190	10	91	521	5	377	3.64e-101	310
MS.gene60236.t1	MTR_7g088820	32.276	536	344	9	5	529	62	589	7.31e-99	311
MS.gene60236.t1	MTR_7g088820	32.150	535	344	9	6	529	1	527	8.80e-99	309
MS.gene60236.t1	MTR_7g067010	35.306	490	294	8	20	499	76	552	3.66e-95	301
MS.gene60236.t1	MTR_3g462710	35.010	497	300	11	20	505	76	560	8.95e-95	300
MS.gene60236.t1	MTR_4g107610	30.965	549	346	12	1	526	64	602	3.48e-92	294
MS.gene60236.t1	MTR_4g015080	33.725	510	319	10	4	505	70	568	7.28e-91	290
MS.gene60236.t1	MTR_5g012270	31.354	539	332	12	2	521	63	582	5.57e-89	285
MS.gene60236.t1	MTR_7g088820	31.622	487	314	9	54	529	1	479	4.11e-88	280
MS.gene60236.t1	MTR_7g064780	30.451	532	350	9	3	522	61	584	1.91e-87	281
MS.gene60236.t1	MTR_7g064800	32.427	515	318	12	3	499	61	563	1.85e-86	279
MS.gene60236.t1	MTR_3g112460	32.749	513	308	14	4	502	57	546	3.39e-85	275
MS.gene60236.t1	MTR_5g085850	32.282	539	321	15	5	526	65	576	2.03e-84	273
MS.gene60236.t1	MTR_3g462710	34.125	463	282	11	54	505	1	451	2.53e-84	269
MS.gene60236.t1	MTR_4g114340	32.745	510	332	9	1	507	57	558	6.40e-84	271
MS.gene60236.t1	MTR_3g112450	33.401	491	298	10	25	505	80	551	1.25e-83	271
MS.gene60236.t1	MTR_3g072300	33.469	490	303	12	26	505	82	558	1.63e-83	271
MS.gene60236.t1	MTR_3g112470	32.681	511	311	13	4	502	57	546	1.67e-83	270
MS.gene60236.t1	MTR_4g033325	34.257	505	296	11	9	505	72	548	3.71e-83	269
MS.gene60236.t1	MTR_7g098200	32.617	512	316	11	20	523	81	571	1.33e-82	268
MS.gene60236.t1	MTR_7g098040	32.731	498	311	10	25	511	91	575	2.97e-82	268
MS.gene60236.t1	MTR_7g098200	32.177	519	319	11	20	523	81	581	3.18e-82	268
MS.gene60236.t1	MTR_5g012290	29.907	535	350	10	2	521	61	585	3.26e-82	268
MS.gene60236.t1	MTR_3g069500	31.128	514	317	11	7	505	66	557	4.98e-82	267
MS.gene60236.t1	MTR_2g093160	33.269	520	303	15	1	505	54	544	9.98e-82	265
MS.gene60236.t1	MTR_4g033315	33.803	497	295	11	23	511	86	556	1.45e-81	265
MS.gene60236.t1	MTR_4g033310	33.803	497	295	11	23	511	86	556	1.45e-81	265
MS.gene60236.t1	MTR_7g098220	33.469	490	306	11	25	505	43	521	8.61e-81	263
MS.gene60236.t1	MTR_0294s0020	33.333	495	292	11	20	505	83	548	1.88e-80	262
MS.gene60236.t1	MTR_7g098220	33.265	490	307	10	25	505	87	565	3.05e-80	263
MS.gene60236.t1	MTR_4g019580	31.890	508	320	14	20	518	88	578	3.76e-80	262
MS.gene60236.t1	MTR_7g098180	33.814	485	308	9	24	502	87	564	3.92e-80	262
MS.gene60236.t1	MTR_7g098230	32.422	512	329	11	19	523	77	578	6.93e-80	261
MS.gene60236.t1	MTR_2g093180	33.911	519	296	14	4	505	57	545	2.80e-79	259
MS.gene60236.t1	MTR_4g101380	30.654	535	349	11	2	521	61	588	5.93e-79	259
MS.gene60236.t1	MTR_2g093640	33.723	513	304	11	4	505	57	544	2.38e-78	256
MS.gene60236.t1	MTR_7g098160	31.412	503	327	10	25	519	90	582	2.70e-78	258
MS.gene60236.t1	MTR_7g065080	30.814	516	320	13	6	505	61	555	4.33e-78	256
MS.gene60236.t1	MTR_3g069420	32.258	496	313	11	19	505	85	566	5.46e-78	256
MS.gene60236.t1	MTR_3g005010	31.727	498	299	9	20	509	82	546	1.13e-77	254
MS.gene60236.t1	MTR_3g069440	30.485	515	329	10	7	505	64	565	2.10e-77	255
MS.gene60236.t1	MTR_7g065080	31.084	489	308	12	25	505	1	468	2.15e-77	252
MS.gene60236.t1	MTR_1g075440	31.845	515	327	10	19	522	79	580	2.69e-77	254
MS.gene60236.t1	MTR_1g042310	31.081	518	327	12	19	522	33	534	3.97e-77	253
MS.gene60236.t1	MTR_4g033325	33.689	469	275	11	45	505	10	450	3.98e-77	250
MS.gene60236.t1	MTR_1g042310	31.081	518	327	12	19	522	40	541	5.27e-77	253
MS.gene60236.t1	MTR_4g033330	34.316	475	280	11	20	488	83	531	1.08e-76	251
MS.gene60236.t1	MTR_1g042310	31.081	518	327	12	19	522	77	578	1.09e-76	253
MS.gene60236.t1	MTR_7g098090	31.456	515	316	11	25	519	90	587	1.59e-76	253
MS.gene60236.t1	MTR_7g006540	32.752	516	306	11	18	505	107	609	1.84e-76	253
MS.gene60236.t1	MTR_4g033325	33.710	442	266	10	72	505	2	424	1.27e-75	246
MS.gene60236.t1	MTR_1g041885	31.875	480	298	13	19	488	33	493	2.31e-75	248
MS.gene60236.t1	MTR_2g005130	29.730	518	333	12	8	517	80	574	1.24e-74	248
MS.gene60236.t1	MTR_1g041875	31.969	513	322	12	19	522	80	574	1.55e-74	247
MS.gene60236.t1	MTR_3g100980	31.784	538	332	14	2	525	50	566	1.59e-74	247
MS.gene60236.t1	MTR_5g014150	29.528	508	346	7	20	519	96	599	1.84e-74	248
MS.gene60236.t1	MTR_2g017750	28.864	537	357	14	1	518	67	597	9.38e-74	246
MS.gene60236.t1	MTR_8g038880	31.200	500	296	10	19	499	71	541	2.02e-73	244
MS.gene60236.t1	MTR_4g033385	32.974	464	272	10	53	505	16	451	1.19e-72	239
MS.gene60236.t1	MTR_7g098200	31.340	485	300	11	54	523	1	467	3.51e-72	238
MS.gene60236.t1	MTR_1g085090	28.177	543	361	13	1	535	52	573	8.93e-72	240
MS.gene60236.t1	MTR_1g041815	30.019	513	338	10	19	522	78	578	6.26e-70	235
MS.gene60236.t1	MTR_7g005930	30.019	523	340	10	9	521	76	582	1.63e-69	234
MS.gene60236.t1	MTR_1g041835	29.447	506	336	10	26	522	85	578	1.86e-69	233
MS.gene60236.t1	MTR_4g033375	32.955	440	264	9	20	453	84	498	2.19e-69	231
MS.gene60236.t1	MTR_4g033395	33.700	454	264	9	9	453	73	498	2.99e-69	231
MS.gene60236.t1	MTR_3g100980	30.389	566	331	15	2	525	50	594	5.13e-69	233
MS.gene60236.t1	MTR_4g098800	29.757	494	324	10	20	502	88	569	3.27e-68	231
MS.gene60236.t1	MTR_4g098800	29.757	494	324	10	20	502	153	634	1.04e-67	231
MS.gene60236.t1	MTR_3g014790	30.485	515	307	13	26	522	75	556	1.74e-67	228
MS.gene60236.t1	MTR_8g469310	31.753	485	284	15	45	504	103	565	5.49e-66	224
MS.gene60236.t1	MTR_7g010820	30.608	477	314	10	20	485	78	548	2.85e-65	223
MS.gene60236.t1	MTR_8g087780	30.723	498	320	14	1	479	54	545	1.43e-64	221
MS.gene60236.t1	MTR_7g111260	29.070	516	326	15	19	524	70	555	4.92e-64	219
MS.gene60236.t1	MTR_7g013270	30.502	518	330	10	20	522	142	644	9.82e-64	220
MS.gene60236.t1	MTR_8g087810	30.566	530	343	12	1	508	54	580	1.09e-63	218
MS.gene60236.t1	MTR_1g116930	29.045	513	333	13	20	522	75	566	9.22e-63	216
MS.gene60236.t1	MTR_5g038380	28.226	496	312	11	33	504	93	568	1.62e-61	213
MS.gene60236.t1	MTR_4g107670	29.554	538	318	18	6	505	54	568	8.30e-61	210
MS.gene60236.t1	MTR_4g123537	28.291	509	328	15	25	522	98	580	1.91e-54	194
MS.gene60236.t1	MTR_6g008690	29.330	433	261	12	99	508	127	537	6.82e-54	191
MS.gene60236.t1	MTR_7g098210	27.713	516	281	13	6	511	12	445	4.79e-52	184
MS.gene60236.t1	MTR_4g033310	31.024	332	212	5	184	511	174	492	2.34e-51	183
MS.gene60236.t1	MTR_4g033310	41.593	113	53	4	23	134	86	186	5.29e-12	68.6
MS.gene60236.t1	MTR_7g098150	29.945	364	242	8	25	383	90	445	3.80e-47	171
MS.gene60236.t1	MTR_4g024930	27.510	498	318	14	19	505	87	552	6.41e-44	164
MS.gene60236.t1	MTR_7g052600	25.000	492	322	11	19	505	76	525	2.11e-36	142
MS.gene60236.t1	MTR_7g051880	25.720	486	314	12	19	499	76	519	1.78e-34	137
MS.gene60236.t1	MTR_7g051830	24.897	486	318	11	19	499	76	519	9.41e-33	132
MS.gene60236.t1	MTR_8g091265	39.450	109	60	4	235	339	3	109	1.05e-17	80.5
MS.gene60236.t1	MTR_3g065350	28.485	165	108	5	277	439	1	157	3.30e-14	70.9
MS.gene60236.t1	MTR_4g033390	34.043	94	59	2	423	513	30	123	5.38e-12	63.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60236.t1	AT1G52190	54.696	543	236	6	4	536	57	599	0.0	632
MS.gene60236.t1	AT3G16180	54.664	536	230	7	1	524	56	590	0.0	617
MS.gene60236.t1	AT1G69870	36.447	546	315	12	1	522	76	613	5.44e-120	367
MS.gene60236.t1	AT1G68570	36.773	533	320	9	5	524	30	558	1.98e-110	340
MS.gene60236.t1	AT1G68570	36.773	533	320	9	5	524	60	588	7.07e-110	340
MS.gene60236.t1	AT5G62680	34.962	532	330	10	4	522	79	607	1.88e-108	337
MS.gene60236.t1	AT3G47960	34.961	512	320	8	4	505	97	605	7.85e-104	325
MS.gene60236.t1	AT1G27080	34.011	541	331	13	4	535	8	531	4.12e-103	320
MS.gene60236.t1	AT1G27080	34.011	541	331	13	4	535	50	573	1.12e-102	320
MS.gene60236.t1	AT1G18880	34.047	514	322	10	4	505	55	563	1.56e-100	315
MS.gene60236.t1	AT1G62200	37.081	507	290	12	7	501	92	581	2.86e-98	310
MS.gene60236.t1	AT3G54140	34.818	494	305	8	20	505	76	560	4.54e-97	306
MS.gene60236.t1	AT3G54140	34.818	494	305	8	20	505	76	560	4.54e-97	306
MS.gene60236.t1	AT2G02040	35.060	502	305	10	7	498	81	571	8.63e-96	303
MS.gene60236.t1	AT1G62200	35.888	535	287	14	7	501	92	610	7.20e-94	299
MS.gene60236.t1	AT5G28470	31.703	511	322	10	1	498	50	546	8.75e-94	297
MS.gene60236.t1	AT1G62200	35.888	535	287	14	7	501	106	624	1.20e-93	299
MS.gene60236.t1	AT5G01180	34.490	490	296	12	26	503	83	559	1.08e-91	292
MS.gene60236.t1	AT5G01180	34.490	490	296	12	26	503	83	559	1.08e-91	292
MS.gene60236.t1	AT5G01180	34.490	490	296	12	26	503	83	559	1.08e-91	292
MS.gene60236.t1	AT5G28470	31.507	511	321	11	1	498	50	544	7.48e-91	289
MS.gene60236.t1	AT5G11570	37.402	508	234	15	4	506	49	477	7.97e-91	287
MS.gene60236.t1	AT3G45650	32.871	505	314	9	4	505	58	540	2.37e-90	288
MS.gene60236.t1	AT2G26690	33.936	498	315	10	33	526	44	531	3.24e-90	287
MS.gene60236.t1	AT2G26690	33.936	498	315	10	33	526	56	543	5.76e-90	286
MS.gene60236.t1	AT2G26690	33.396	530	339	10	1	526	57	576	1.68e-89	286
MS.gene60236.t1	AT3G21670	32.348	541	331	13	5	532	64	582	1.80e-85	276
MS.gene60236.t1	AT3G45660	32.742	507	314	11	3	505	56	539	9.15e-85	273
MS.gene60236.t1	AT3G45660	32.742	507	314	11	3	505	56	539	9.15e-85	273
MS.gene60236.t1	AT5G46040	32.696	523	327	8	19	530	78	586	1.06e-84	274
MS.gene60236.t1	AT3G45650	31.262	531	314	10	4	505	58	566	1.26e-84	274
MS.gene60236.t1	AT1G69860	33.528	513	306	12	7	505	55	546	1.34e-84	273
MS.gene60236.t1	AT3G45660	32.544	507	315	11	3	505	77	560	2.03e-84	273
MS.gene60236.t1	AT2G02020	32.347	507	293	11	4	505	79	540	7.38e-83	268
MS.gene60236.t1	AT3G45720	29.924	528	332	12	3	523	54	550	9.93e-82	265
MS.gene60236.t1	AT3G45710	31.496	508	313	11	23	523	76	555	2.46e-80	262
MS.gene60236.t1	AT1G33440	32.830	530	320	12	8	522	78	586	8.64e-80	261
MS.gene60236.t1	AT5G46050	31.068	515	330	8	19	522	78	578	1.88e-79	260
MS.gene60236.t1	AT3G54450	29.787	517	323	10	19	519	63	555	3.53e-79	259
MS.gene60236.t1	AT3G45680	31.120	527	329	11	3	523	55	553	5.26e-79	258
MS.gene60236.t1	AT1G59740	32.000	525	328	14	8	519	81	589	4.33e-78	257
MS.gene60236.t1	AT2G40460	31.600	500	311	11	26	514	82	561	6.76e-77	253
MS.gene60236.t1	AT1G12110	32.402	537	336	13	5	524	62	588	7.07e-77	253
MS.gene60236.t1	AT5G13400	31.792	519	331	9	18	521	108	618	2.57e-76	253
MS.gene60236.t1	AT1G22540	31.224	490	309	8	21	505	83	549	5.54e-74	245
MS.gene60236.t1	AT3G53960	29.091	495	325	11	22	505	91	570	9.42e-74	246
MS.gene60236.t1	AT3G45700	29.533	535	332	11	3	529	51	548	3.38e-73	243
MS.gene60236.t1	AT1G72125	30.081	492	315	9	22	505	83	553	3.82e-73	243
MS.gene60236.t1	AT1G72140	31.014	503	297	9	17	505	83	549	5.50e-73	242
MS.gene60236.t1	AT2G37900	29.652	489	316	11	22	502	13	481	6.59e-73	241
MS.gene60236.t1	AT2G37900	29.652	489	316	11	22	502	92	560	3.75e-72	241
MS.gene60236.t1	AT5G46050	30.833	480	307	8	54	522	1	466	1.05e-71	236
MS.gene60236.t1	AT1G32450	27.925	530	362	9	20	537	89	610	1.71e-70	237
MS.gene60236.t1	AT1G27040	30.290	482	306	10	34	504	61	523	9.69e-70	233
MS.gene60236.t1	AT1G27040	30.290	482	306	10	34	504	93	555	2.78e-69	233
MS.gene60236.t1	AT1G27040	30.290	482	306	10	34	504	89	551	3.20e-69	233
MS.gene60236.t1	AT1G22570	29.897	485	294	9	20	486	45	501	1.11e-66	225
MS.gene60236.t1	AT1G22570	29.897	485	294	9	20	486	82	538	2.16e-66	225
MS.gene60236.t1	AT2G02020	30.693	505	283	12	4	505	79	519	2.33e-65	221
MS.gene60236.t1	AT1G22550	29.447	506	306	12	20	505	82	556	3.36e-65	222
MS.gene60236.t1	AT4G21680	29.563	504	324	11	20	505	80	570	7.11e-65	221
MS.gene60236.t1	AT5G14940	29.183	514	324	13	22	518	61	551	5.19e-64	218
MS.gene60236.t1	AT1G72120	30.346	491	309	9	23	505	84	549	1.01e-63	218
MS.gene60236.t1	AT3G45690	29.857	489	272	14	23	505	73	496	2.09e-62	213
MS.gene60236.t1	AT1G72130	28.889	495	302	10	20	505	77	530	1.04e-61	212
MS.gene60236.t1	AT5G19640	27.866	506	330	10	20	515	111	591	3.94e-60	209
MS.gene60236.t1	AT3G01350	29.533	535	311	18	22	523	61	562	6.73e-60	207
MS.gene60236.t1	AT1G69850	28.717	491	324	11	33	504	90	573	9.23e-59	205
MS.gene60236.t1	AT3G25260	27.593	511	307	13	3	504	56	512	1.22e-54	192
MS.gene60236.t1	AT1G72130	28.605	430	267	9	85	505	14	412	8.84e-52	182
MS.gene60236.t1	AT1G72130	28.605	430	267	9	85	505	14	412	8.84e-52	182
MS.gene60236.t1	AT3G25280	26.772	508	325	12	1	504	54	518	1.40e-48	176
MS.gene60236.t1	AT5G62730	27.475	495	328	11	19	504	48	520	3.50e-48	175
MS.gene60236.t1	AT5G62730	27.475	495	328	11	19	504	107	579	8.45e-48	175
MS.gene60236.t1	AT2G38100	23.669	507	330	21	31	522	37	501	1.51e-20	95.5
MS.gene60236.t1	AT2G38100	23.866	507	329	21	31	522	59	523	3.11e-20	94.4
MS.gene60236.t1	AT2G38100	23.669	507	330	21	31	522	53	517	3.64e-20	94.4

Find 114 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ACCAATTTCATGCCTCTTAT+TGG	0.106772	4.3:-85660855	MS.gene60236:CDS
TCCAATGCCCTTTGGTTATC+AGG	0.181681	4.3:+85659742	None:intergenic
CAGCCGGAACTTCGAAGTTT+TGG	0.192354	4.3:+85659026	None:intergenic
CGGTATAGTAGAACTCATTT+TGG	0.208877	4.3:+85658693	None:intergenic
GCCGATTCGACAAGTATTAT+TGG	0.244280	4.3:-85658517	MS.gene60236:CDS
TCATTTCTGAAGTCAATTAA+TGG	0.244897	4.3:+85658383	None:intergenic
AGGTTTCTTGCTGTTGGTTT+AGG	0.258775	4.3:-85660804	MS.gene60236:CDS
CTTAACATTGGAGGCTCATT+TGG	0.269927	4.3:-85659085	MS.gene60236:CDS
CTGTTCCAACTGATAAAATA+AGG	0.273173	4.3:-85659417	MS.gene60236:intron
GCTGAAGCATTCAATGTTAT+AGG	0.290021	4.3:-85658716	MS.gene60236:CDS
TGATATTCACAATATTTATA+TGG	0.291881	4.3:-85658985	MS.gene60236:CDS
CTTGGATGGAAACTTGGTTT+TGG	0.310808	4.3:-85659637	MS.gene60236:CDS
ACAAATAGCACCTTGTTTAC+CGG	0.313397	4.3:-85659541	MS.gene60236:CDS
TTCATTGCTGATTCTCATCT+TGG	0.318778	4.3:-85660828	MS.gene60236:CDS
GTAGTATGTAGTTGGGCTTA+TGG	0.330481	4.3:-85658455	MS.gene60236:CDS
ACCAATAAGAGGCATGAAAT+TGG	0.330763	4.3:+85660854	None:intergenic
AGGTTCTATCATCACTTTCA+TGG	0.335587	4.3:-85660784	MS.gene60236:intron
TGGTGGTTGCAACAGATAAA+AGG	0.339836	4.3:+85660874	None:intergenic
TCCCTTGCTCTTATGTCCAT+TGG	0.348657	4.3:-85659826	MS.gene60236:CDS
CTTCAATGCTCCATAGCGTT+TGG	0.357999	4.3:-85659793	MS.gene60236:CDS
CAGCAATTGTCGAGACTATA+AGG	0.361104	4.3:-85658838	MS.gene60236:CDS
CTTGGAAGGTTTCTTGCTGT+TGG	0.361872	4.3:-85660810	MS.gene60236:CDS
TACATTCCAGCCGAGTTCTT+AGG	0.374613	4.3:+85659466	None:intergenic
AACCCAAAACTTCGAAGTTC+CGG	0.380968	4.3:-85659029	MS.gene60236:CDS
TGGAAATGATGGATGGATAT+CGG	0.386093	4.3:-85658555	MS.gene60236:CDS
TTCTGTCATAATTGCATTCA+CGG	0.389746	4.3:-85659683	MS.gene60236:CDS
GAAAAGAACATAAGTGTTGC+TGG	0.403449	4.3:+85659610	None:intergenic
GTTTCCATCCAAGATGATCT+TGG	0.407018	4.3:+85659647	None:intergenic
TGGAATGTATCATCATATAA+AGG	0.408219	4.3:-85659452	MS.gene60236:CDS
CGACATAGTCTTGGGAAATT+CGG	0.414520	4.3:+85658673	None:intergenic
GTCTTTGCACTAATCCTAAC+CGG	0.414813	4.3:+85658908	None:intergenic
TGTATTATGTAGTATGTAGT+TGG	0.415728	4.3:-85658463	MS.gene60236:CDS
AGGTCTTGCTTGTGGGATCA+TGG	0.416917	4.3:+85659918	None:intergenic
GCCAATAATACTTGTCGAAT+CGG	0.421090	4.3:+85658516	None:intergenic
AGAGCAATCAATGAAGGATA+TGG	0.424291	4.3:-85658809	MS.gene60236:CDS
GATCATCTTGGATGGAAACT+TGG	0.426344	4.3:-85659643	MS.gene60236:CDS
ATGGATCAGCTTCAGATCCT+TGG	0.436157	4.3:-85659192	MS.gene60236:CDS
TTTCCTCAACTTTGCTTGGG+TGG	0.439391	4.3:-85658743	MS.gene60236:CDS
GCTCTTATGTCCATTGGAAA+TGG	0.445474	4.3:-85659820	MS.gene60236:CDS
AGAATATTTCCAATGCCCTT+TGG	0.446255	4.3:+85659734	None:intergenic
GCAATGAAAGCACCAATAAG+AGG	0.457008	4.3:+85660843	None:intergenic
CTCGAAGCTCAGAGGAAAAC+CGG	0.457609	4.3:-85658927	MS.gene60236:CDS
ATCTGCAACAACTTCACAAA+TGG	0.461858	4.3:-85659863	MS.gene60236:CDS
ATTAATTGACTTCAGAAATG+AGG	0.462266	4.3:-85658381	MS.gene60236:CDS
CCCTGATAACCAAAGGGCAT+TGG	0.463599	4.3:-85659743	MS.gene60236:CDS
TTGCTGATTCTCATCTTGGA+AGG	0.464292	4.3:-85660824	MS.gene60236:CDS
ACCTCGAGAGGTGGAAATGA+TGG	0.466678	4.3:-85658566	MS.gene60236:CDS
AAGGAGGAGGTCTTGCTTGT+GGG	0.467412	4.3:+85659911	None:intergenic
TTTATTCAGCATTGTCGAAA+GGG	0.476280	4.3:-85658591	MS.gene60236:CDS
ATTAGTGCAAAGACAAGAAT+GGG	0.480477	4.3:-85658899	MS.gene60236:CDS
CAAACGCTATGGAGCATTGA+AGG	0.485367	4.3:+85659794	None:intergenic
GTATTATGTAGTATGTAGTT+GGG	0.485998	4.3:-85658462	MS.gene60236:CDS
ATCAAAAGTAAGTGAAGATG+AGG	0.488823	4.3:-85658414	MS.gene60236:CDS
CCAATGCCCTTTGGTTATCA+GGG	0.489270	4.3:+85659743	None:intergenic
CTGGTCCGCGCCAAACGCTA+TGG	0.494260	4.3:+85659783	None:intergenic
CATAGCGTTTGGCGCGGACC+AGG	0.495367	4.3:-85659782	MS.gene60236:CDS
CATTGGAAATATTCTTCAGT+TGG	0.496292	4.3:-85659726	MS.gene60236:CDS
CCGTTGCGGCTTATAAGAAC+AGG	0.500334	4.3:-85659504	MS.gene60236:CDS
TGGCTTATTGCCACAGTGAG+TGG	0.505821	4.3:-85658497	MS.gene60236:CDS
AGCGATGCTCGACATAGTCT+TGG	0.506861	4.3:+85658664	None:intergenic
GATTAGTGCAAAGACAAGAA+TGG	0.507012	4.3:-85658900	MS.gene60236:CDS
TCTGTCATAATTGCATTCAC+GGG	0.521279	4.3:-85659682	MS.gene60236:CDS
TTGATGTCACTTAACATTGG+AGG	0.525633	4.3:-85659094	MS.gene60236:CDS
GCGATGCTCGACATAGTCTT+GGG	0.526210	4.3:+85658665	None:intergenic
CAGTTGGTACTATGCTTCCT+CGG	0.529829	4.3:-85659710	MS.gene60236:CDS
CGAAGAAGAGCAATCAATGA+AGG	0.534308	4.3:-85658815	MS.gene60236:CDS
TTAATTGACTTCAGAAATGA+GGG	0.534447	4.3:-85658380	MS.gene60236:CDS
CAAGGAGGAGGTCTTGCTTG+TGG	0.537281	4.3:+85659910	None:intergenic
GACATGTTCAACACTGAATG+AGG	0.541800	4.3:+85658779	None:intergenic
CTACCACCTAAGAACTCGGC+TGG	0.541857	4.3:-85659472	MS.gene60236:CDS
GTATATATCCAAGATCATCT+TGG	0.542980	4.3:-85659655	MS.gene60236:CDS
CAAAACTTCGAAGTTCCGGC+TGG	0.549745	4.3:-85659025	MS.gene60236:CDS
GCAAAGACAAGAATGGGACT+TGG	0.551458	4.3:-85658893	MS.gene60236:CDS
AGAAGATATAATGTATCCTA+CGG	0.552827	4.3:+85658616	None:intergenic
AGCTCAGAGGAAAACCGGTT+AGG	0.555051	4.3:-85658922	MS.gene60236:CDS
TTTGATTCTACATCAGCAGT+AGG	0.565843	4.3:+85658431	None:intergenic
CTTATGTCCATTGGAAATGG+TGG	0.567721	4.3:-85659817	MS.gene60236:CDS
TTGAAGGCCACCATTTCCAA+TGG	0.569645	4.3:+85659810	None:intergenic
TCGTACAAAGCCGGTAAACA+AGG	0.571512	4.3:+85659531	None:intergenic
CCTCTGAGCTTCGAGGCTAG+AGG	0.574416	4.3:+85658935	None:intergenic
CGAGAGGTGGAAATGATGGA+TGG	0.575410	4.3:-85658562	MS.gene60236:CDS
AACGGTCACTCGTACAAAGC+CGG	0.581357	4.3:+85659522	None:intergenic
CCTGTTCTTATAAGCCGCAA+CGG	0.581934	4.3:+85659504	None:intergenic
AGATAACCCTGATAACCAAA+GGG	0.582920	4.3:-85659749	MS.gene60236:CDS
TCCATCATTTCCACCTCTCG+AGG	0.582933	4.3:+85658565	None:intergenic
ATATCCAAGATCATCTTGGA+TGG	0.583794	4.3:-85659651	MS.gene60236:CDS
TCAATTGTGCATAGACTCCA+AGG	0.586697	4.3:+85659175	None:intergenic
AAGATAACCCTGATAACCAA+AGG	0.589458	4.3:-85659750	MS.gene60236:CDS
TCCAATGGACATAAGAGCAA+GGG	0.589995	4.3:+85659825	None:intergenic
AATAAGAGGCATGAAATTGG+TGG	0.602647	4.3:+85660857	None:intergenic
GTTGCAGGAATGCAAGGAGG+AGG	0.607647	4.3:+85659898	None:intergenic
AACAGGGAATGATACTCTTG+TGG	0.610637	4.3:-85659948	MS.gene60236:intron
ATCTTGATGTCACTTAACAT+TGG	0.611897	4.3:-85659097	MS.gene60236:CDS
TTCCAATGGACATAAGAGCA+AGG	0.616534	4.3:+85659824	None:intergenic
TCGACTACCACCTAAGAACT+CGG	0.619351	4.3:-85659476	MS.gene60236:CDS
ATTCCACCCAAGCAAAGTTG+AGG	0.630367	4.3:+85658740	None:intergenic
ATTCCAGCCGAGTTCTTAGG+TGG	0.637012	4.3:+85659469	None:intergenic
AAATGAGGGTTCATATGACA+AGG	0.644999	4.3:-85658366	MS.gene60236:CDS
GAAAGGGTAACCTCGAGAGG+TGG	0.651879	4.3:-85658575	MS.gene60236:CDS
ATGCTCCATAGCGTTTGGCG+CGG	0.653136	4.3:-85659788	MS.gene60236:CDS
ATCTGAAGCTGATCCATCAG+AGG	0.653350	4.3:+85659198	None:intergenic
GTCGAAAGGGTAACCTCGAG+AGG	0.656180	4.3:-85658578	MS.gene60236:CDS
CTTTGTACGAGTGACCGTTG+CGG	0.660158	4.3:-85659518	MS.gene60236:CDS
GATATCGGATAATATTAACA+AGG	0.662248	4.3:-85658540	MS.gene60236:CDS
CCTCTAGCCTCGAAGCTCAG+AGG	0.662495	4.3:-85658935	MS.gene60236:CDS
TCATTAAAGTTATTCCACTG+TGG	0.683505	4.3:-85659129	MS.gene60236:CDS
ATATCGGATAATATTAACAA+GGG	0.683833	4.3:-85658539	MS.gene60236:CDS
TCAGTTGCAGGAATGCAAGG+AGG	0.690858	4.3:+85659895	None:intergenic
ATTACACTAAGTGAACCAGC+CGG	0.696488	4.3:+85659010	None:intergenic
AATTATGACAGAAATAGCCG+AGG	0.702109	4.3:+85659693	None:intergenic
TTCGGACTAGGAATGGCCGT+AGG	0.705285	4.3:-85658632	MS.gene60236:CDS
TATATTAAGACCACTCACTG+TGG	0.737154	4.3:+85658487	None:intergenic
TGTTGAACATGTCTGCAATG+TGG	0.741046	4.3:-85658769	MS.gene60236:CDS
AAGATGCTTGTAGACCACAG+TGG	0.801613	4.3:+85659115	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGATATTCACAATATTTATA+TGG	-	chr4.3:85660291-85660310	MS.gene60236:intron	15.0%
!!	AATATAACATGAAAGTTTAG+AGG	-	chr4.3:85658893-85658912	MS.gene60236:CDS	20.0%
!!	ACAAAATCATTTACATTGTT+TGG	+	chr4.3:85659275-85659294	None:intergenic	20.0%
!!	ATATCAACTTATCTAAATGT+AGG	+	chr4.3:85659921-85659940	None:intergenic	20.0%
!!	ATATCGGATAATATTAACAA+GGG	-	chr4.3:85660737-85660756	MS.gene60236:intron	20.0%
!!	CCAAATATTAAATAAGTATC+TGG	+	chr4.3:85659013-85659032	None:intergenic	20.0%
!!	CCAGATACTTATTTAATATT+TGG	-	chr4.3:85659010-85659029	MS.gene60236:CDS	20.0%
!!	GTATTAATATACTGAATTTG+TGG	-	chr4.3:85659990-85660009	MS.gene60236:intron	20.0%
!!	TATCAACTTATCTAAATGTA+GGG	+	chr4.3:85659920-85659939	None:intergenic	20.0%
!!!	GTTTTATTCTTTACATAAAG+TGG	+	chr4.3:85659717-85659736	None:intergenic	20.0%
!	AGAAGATATAATGTATCCTA+CGG	+	chr4.3:85660663-85660682	None:intergenic	25.0%
!	CAAATAAAGATGATGCATTT+AGG	-	chr4.3:85658973-85658992	MS.gene60236:CDS	25.0%
!	CACAAAATGACAACAAAAAT+TGG	+	chr4.3:85659955-85659974	None:intergenic	25.0%
!	GATATCGGATAATATTAACA+AGG	-	chr4.3:85660736-85660755	MS.gene60236:intron	25.0%
!	GTATTATGTAGTATGTAGTT+GGG	-	chr4.3:85660814-85660833	MS.gene60236:CDS	25.0%
!	TAAAGAGCTTCTTTAATAAC+AGG	-	chr4.3:85659039-85659058	MS.gene60236:CDS	25.0%
!	TGGAATGTATCATCATATAA+AGG	-	chr4.3:85659824-85659843	MS.gene60236:CDS	25.0%
!	TGTATTATGTAGTATGTAGT+TGG	-	chr4.3:85660813-85660832	MS.gene60236:CDS	25.0%
!!	ATCATTCACATGATAATGAT+AGG	+	chr4.3:85658541-85658560	None:intergenic	25.0%
!!	ATTAATTGACTTCAGAAATG+AGG	-	chr4.3:85660895-85660914	MS.gene60236:CDS	25.0%
!!	TTAATTGACTTCAGAAATGA+GGG	-	chr4.3:85660896-85660915	MS.gene60236:CDS	25.0%
!!!	ACACTAGACATTTTAGAAAA+TGG	-	chr4.3:85658630-85658649	MS.gene60236:CDS	25.0%
!!!	TCATTTCTGAAGTCAATTAA+TGG	+	chr4.3:85660896-85660915	None:intergenic	25.0%
!!!	TTCAACCTTATTTTATCAGT+TGG	+	chr4.3:85659867-85659886	None:intergenic	25.0%
	AAAATGTCTAGTGTTTGTGT+CGG	+	chr4.3:85658624-85658643	None:intergenic	30.0%
	ACATTGTTTGGTACAAATGA+GGG	+	chr4.3:85659263-85659282	None:intergenic	30.0%
	AGCAAGAAAAAAGAAGAAAG+TGG	+	chr4.3:85659691-85659710	None:intergenic	30.0%
	ATCAAAAGTAAGTGAAGATG+AGG	-	chr4.3:85660862-85660881	MS.gene60236:CDS	30.0%
	ATTAGTGCAAAGACAAGAAT+GGG	-	chr4.3:85660377-85660396	MS.gene60236:intron	30.0%
	CATTGGAAATATTCTTCAGT+TGG	-	chr4.3:85659550-85659569	MS.gene60236:CDS	30.0%
	CATTGTGAAGACAAGATTAA+TGG	-	chr4.3:85658732-85658751	MS.gene60236:CDS	30.0%
	CTAATATTGTGAGATTTCGA+CGG	-	chr4.3:85658829-85658848	MS.gene60236:CDS	30.0%
	CTGTTCCAACTGATAAAATA+AGG	-	chr4.3:85659859-85659878	MS.gene60236:CDS	30.0%
	GAAATCTCACAATATTAGAG+AGG	+	chr4.3:85658827-85658846	None:intergenic	30.0%
	GTATATATCCAAGATCATCT+TGG	-	chr4.3:85659621-85659640	MS.gene60236:CDS	30.0%
	TAATATTGTGAGATTTCGAC+GGG	-	chr4.3:85658830-85658849	MS.gene60236:CDS	30.0%
	TACATTGTTTGGTACAAATG+AGG	+	chr4.3:85659264-85659283	None:intergenic	30.0%
	TCATTAAAGTTATTCCACTG+TGG	-	chr4.3:85660147-85660166	MS.gene60236:intron	30.0%
	TGTCTTCACAATGAAACAAT+TGG	+	chr4.3:85658725-85658744	None:intergenic	30.0%
	TTCAATGAATCTTTCTTGCT+TGG	-	chr4.3:85658771-85658790	MS.gene60236:CDS	30.0%
	TTCTGTCATAATTGCATTCA+CGG	-	chr4.3:85659593-85659612	MS.gene60236:CDS	30.0%
	TTTATTCAGCATTGTCGAAA+GGG	-	chr4.3:85660685-85660704	MS.gene60236:intron	30.0%
!	ATCTTGATGTCACTTAACAT+TGG	-	chr4.3:85660179-85660198	MS.gene60236:intron	30.0%
!	CAACTCAATTTTCTTCCTTT+TGG	-	chr4.3:85659304-85659323	MS.gene60236:intron	30.0%
!	GTTTTTCTCTTTTCTTCACT+TGG	-	chr4.3:85660409-85660428	MS.gene60236:intron	30.0%
!	TTTTATTCAGCATTGTCGAA+AGG	-	chr4.3:85660684-85660703	MS.gene60236:intron	30.0%
!!	ATGTGAATGATTAACTTGTG+TGG	-	chr4.3:85658550-85658569	MS.gene60236:CDS	30.0%
!!	ATTTTCTTCCTTTTGGTAAC+AGG	-	chr4.3:85659311-85659330	MS.gene60236:intron	30.0%
!!	TTTTCTTCCTTTTGGTAACA+GGG	-	chr4.3:85659312-85659331	MS.gene60236:intron	30.0%
	AAATGAGGGTTCATATGACA+AGG	-	chr4.3:85660910-85660929	MS.gene60236:CDS	35.0%
	AAGATAACCCTGATAACCAA+AGG	-	chr4.3:85659526-85659545	MS.gene60236:CDS	35.0%
	AATTATGACAGAAATAGCCG+AGG	+	chr4.3:85659586-85659605	None:intergenic	35.0%
	ACCAATTTCATGCCTCTTAT+TGG	-	chr4.3:85658421-85658440	MS.gene60236:CDS	35.0%
	AGAATATTTCCAATGCCCTT+TGG	+	chr4.3:85659545-85659564	None:intergenic	35.0%
	AGAGCAATCAATGAAGGATA+TGG	-	chr4.3:85660467-85660486	MS.gene60236:intron	35.0%
	AGATAACCCTGATAACCAAA+GGG	-	chr4.3:85659527-85659546	MS.gene60236:CDS	35.0%
	AGGTTCTATCATCACTTTCA+TGG	-	chr4.3:85658492-85658511	MS.gene60236:CDS	35.0%
	ATATCCAAGATCATCTTGGA+TGG	-	chr4.3:85659625-85659644	MS.gene60236:CDS	35.0%
	ATATTGACACCAACACGATA+CGG	+	chr4.3:85658670-85658689	None:intergenic	35.0%
	ATCTGCAACAACTTCACAAA+TGG	-	chr4.3:85659413-85659432	MS.gene60236:intron	35.0%
	GAAAAAGACATAACCTCTGA+TGG	-	chr4.3:85660065-85660084	MS.gene60236:intron	35.0%
	GATTAGTGCAAAGACAAGAA+TGG	-	chr4.3:85660376-85660395	MS.gene60236:intron	35.0%
	GCCAATAATACTTGTCGAAT+CGG	+	chr4.3:85660763-85660782	None:intergenic	35.0%
	GTGAAGACAAGATTAATGGA+GGG	-	chr4.3:85658736-85658755	MS.gene60236:CDS	35.0%
	TATATTAAGACCACTCACTG+TGG	+	chr4.3:85660792-85660811	None:intergenic	35.0%
	TATCATTCCCTGTTACCAAA+AGG	+	chr4.3:85659322-85659341	None:intergenic	35.0%
	TCTGTCATAATTGCATTCAC+GGG	-	chr4.3:85659594-85659613	MS.gene60236:CDS	35.0%
	TGAAGACAAGATTAATGGAG+GGG	-	chr4.3:85658737-85658756	MS.gene60236:CDS	35.0%
	TGTGAAGACAAGATTAATGG+AGG	-	chr4.3:85658735-85658754	MS.gene60236:CDS	35.0%
	TTTGATTCTACATCAGCAGT+AGG	+	chr4.3:85660848-85660867	None:intergenic	35.0%
!	AATAAGAGGCATGAAATTGG+TGG	+	chr4.3:85658422-85658441	None:intergenic	35.0%
!	ACAAATAGCACCTTGTTTAC+CGG	-	chr4.3:85659735-85659754	MS.gene60236:CDS	35.0%
!	ACCAATAAGAGGCATGAAAT+TGG	+	chr4.3:85658425-85658444	None:intergenic	35.0%
!	CATCTTTATTTGATTCACCG+AGG	+	chr4.3:85658965-85658984	None:intergenic	35.0%
!	CGGTATAGTAGAACTCATTT+TGG	+	chr4.3:85660586-85660605	None:intergenic	35.0%
!	CTTTTTCCTCAACTTTGCTT+GGG	-	chr4.3:85660530-85660549	MS.gene60236:intron	35.0%
!	GAAAAGAACATAAGTGTTGC+TGG	+	chr4.3:85659669-85659688	None:intergenic	35.0%
!	GCTGAAGCATTCAATGTTAT+AGG	-	chr4.3:85660560-85660579	MS.gene60236:intron	35.0%
!	GGTTATCTTTTCTATTCACC+TGG	+	chr4.3:85659515-85659534	None:intergenic	35.0%
!	TCAGAGGTTATGTCTTTTTC+TGG	+	chr4.3:85660065-85660084	None:intergenic	35.0%
!	TTGATGTCACTTAACATTGG+AGG	-	chr4.3:85660182-85660201	MS.gene60236:intron	35.0%
!!	GATATGCATTTTTCAGTTGC+AGG	+	chr4.3:85659396-85659415	None:intergenic	35.0%
!!	TGGAAATGATGGATGGATAT+CGG	-	chr4.3:85660721-85660740	MS.gene60236:intron	35.0%
!!	TTCATTGCTGATTCTCATCT+TGG	-	chr4.3:85658448-85658467	MS.gene60236:CDS	35.0%
!!!	GTGGTAATGCTTTGTTTTCT+AGG	-	chr4.3:85660009-85660028	MS.gene60236:intron	35.0%
	AACAGGGAATGATACTCTTG+TGG	-	chr4.3:85659328-85659347	MS.gene60236:intron	40.0%
	AACCCAAAACTTCGAAGTTC+CGG	-	chr4.3:85660247-85660266	MS.gene60236:intron	40.0%
	ATTACACTAAGTGAACCAGC+CGG	+	chr4.3:85660269-85660288	None:intergenic	40.0%
	CAGCAATTGTCGAGACTATA+AGG	-	chr4.3:85660438-85660457	MS.gene60236:intron	40.0%
	CGAAGAAGAGCAATCAATGA+AGG	-	chr4.3:85660461-85660480	MS.gene60236:intron	40.0%
	CTTAACATTGGAGGCTCATT+TGG	-	chr4.3:85660191-85660210	MS.gene60236:intron	40.0%
	CTTATGTCCATTGGAAATGG+TGG	-	chr4.3:85659459-85659478	MS.gene60236:CDS	40.0%
	GACATGTTCAACACTGAATG+AGG	+	chr4.3:85660500-85660519	None:intergenic	40.0%
	GATCATCTTGGATGGAAACT+TGG	-	chr4.3:85659633-85659652	MS.gene60236:CDS	40.0%
	GCTCTTATGTCCATTGGAAA+TGG	-	chr4.3:85659456-85659475	MS.gene60236:CDS	40.0%
	GTAGTATGTAGTTGGGCTTA+TGG	-	chr4.3:85660821-85660840	MS.gene60236:CDS	40.0%
	GTCTTTGCACTAATCCTAAC+CGG	+	chr4.3:85660371-85660390	None:intergenic	40.0%
	GTGTGGAAGAAGAGATGAAT+AGG	-	chr4.3:85658567-85658586	MS.gene60236:CDS	40.0%
	GTTTCCATCCAAGATGATCT+TGG	+	chr4.3:85659632-85659651	None:intergenic	40.0%
	GTTTGGTACAAATGAGGGAA+GGG	+	chr4.3:85659258-85659277	None:intergenic	40.0%
	TCAATTGTGCATAGACTCCA+AGG	+	chr4.3:85660104-85660123	None:intergenic	40.0%
	TCCAATGGACATAAGAGCAA+GGG	+	chr4.3:85659454-85659473	None:intergenic	40.0%
	TCTAGTGAAATCTCTCTCCT+CGG	-	chr4.3:85658945-85658964	MS.gene60236:CDS	40.0%
	TGGTGGTTGCAACAGATAAA+AGG	+	chr4.3:85658405-85658424	None:intergenic	40.0%
	TGTTGAACATGTCTGCAATG+TGG	-	chr4.3:85660507-85660526	MS.gene60236:intron	40.0%
	TGTTTGGTACAAATGAGGGA+AGG	+	chr4.3:85659259-85659278	None:intergenic	40.0%
	TTCCAATGGACATAAGAGCA+AGG	+	chr4.3:85659455-85659474	None:intergenic	40.0%
	TTTGGTACAAATGAGGGAAG+GGG	+	chr4.3:85659257-85659276	None:intergenic	40.0%
!	CGACATAGTCTTGGGAAATT+CGG	+	chr4.3:85660606-85660625	None:intergenic	40.0%
!	CTTGGATGGAAACTTGGTTT+TGG	-	chr4.3:85659639-85659658	MS.gene60236:CDS	40.0%
!	GGTGTTACATAGCTCATTTG+TGG	-	chr4.3:85658698-85658717	MS.gene60236:CDS	40.0%
!	TTTTCAGTTGCAGGAATGCA+AGG	+	chr4.3:85659387-85659406	None:intergenic	40.0%
!!	AGCATCGCTTCATCACTTTT+CGG	-	chr4.3:85660626-85660645	MS.gene60236:intron	40.0%
!!	AGGTTTCTTGCTGTTGGTTT+AGG	-	chr4.3:85658472-85658491	MS.gene60236:CDS	40.0%
!!	ATCACTTTTCGGACTAGGAA+TGG	-	chr4.3:85660637-85660656	MS.gene60236:intron	40.0%
!!	GCAATGAAAGCACCAATAAG+AGG	+	chr4.3:85658436-85658455	None:intergenic	40.0%
!!	GCCGATTCGACAAGTATTAT+TGG	-	chr4.3:85660759-85660778	MS.gene60236:intron	40.0%
!!	GCTTTTTCCTCAACTTTGCT+TGG	-	chr4.3:85660529-85660548	MS.gene60236:intron	40.0%
!!	GTATCGTGTTGGTGTCAATA+TGG	-	chr4.3:85658669-85658688	MS.gene60236:CDS	40.0%
!!	TTGCTGATTCTCATCTTGGA+AGG	-	chr4.3:85658452-85658471	MS.gene60236:CDS	40.0%
!!	TTGGTGTCAATATGGAGTGT+CGG	-	chr4.3:85658677-85658696	MS.gene60236:CDS	40.0%
	AAGATGCTTGTAGACCACAG+TGG	+	chr4.3:85660164-85660183	None:intergenic	45.0%
	AGAGATTTCACTAGAGGAGG+AGG	+	chr4.3:85658940-85658959	None:intergenic	45.0%
	ATCGAATGTCCGTATCGTGT+TGG	-	chr4.3:85658658-85658677	MS.gene60236:CDS	45.0%
	ATGGATCAGCTTCAGATCCT+TGG	-	chr4.3:85660084-85660103	MS.gene60236:intron	45.0%
	ATTCCACCCAAGCAAAGTTG+AGG	+	chr4.3:85660539-85660558	None:intergenic	45.0%
	CCAATGCCCTTTGGTTATCA+GGG	+	chr4.3:85659536-85659555	None:intergenic	45.0%
	CCTGTTCTTATAAGCCGCAA+CGG	+	chr4.3:85659775-85659794	None:intergenic	45.0%
	CTTCAATGCTCCATAGCGTT+TGG	-	chr4.3:85659483-85659502	MS.gene60236:CDS	45.0%
	CTTGGCTCAACGATTTGAAG+GGG	-	chr4.3:85658789-85658808	MS.gene60236:CDS	45.0%
	GACAAGATTAATGGAGGGGA+TGG	-	chr4.3:85658741-85658760	MS.gene60236:CDS	45.0%
	GAGAGAGATTTCACTAGAGG+AGG	+	chr4.3:85658943-85658962	None:intergenic	45.0%
	GAGGAGAGAGATTTCACTAG+AGG	+	chr4.3:85658946-85658965	None:intergenic	45.0%
	GCAAAGACAAGAATGGGACT+TGG	-	chr4.3:85660383-85660402	MS.gene60236:intron	45.0%
	GCTTGGCTCAACGATTTGAA+GGG	-	chr4.3:85658788-85658807	MS.gene60236:CDS	45.0%
	TACATTCCAGCCGAGTTCTT+AGG	+	chr4.3:85659813-85659832	None:intergenic	45.0%
	TCCAATGCCCTTTGGTTATC+AGG	+	chr4.3:85659537-85659556	None:intergenic	45.0%
	TCCCTTGCTCTTATGTCCAT+TGG	-	chr4.3:85659450-85659469	MS.gene60236:CDS	45.0%
	TCGACTACCACCTAAGAACT+CGG	-	chr4.3:85659800-85659819	MS.gene60236:CDS	45.0%
	TCGTACAAAGCCGGTAAACA+AGG	+	chr4.3:85659748-85659767	None:intergenic	45.0%
	TGCTTGGCTCAACGATTTGA+AGG	-	chr4.3:85658787-85658806	MS.gene60236:CDS	45.0%
	TTGAAGGCCACCATTTCCAA+TGG	+	chr4.3:85659469-85659488	None:intergenic	45.0%
	TTTCCTCAACTTTGCTTGGG+TGG	-	chr4.3:85660533-85660552	MS.gene60236:intron	45.0%
!	AGCCGGAACTTCGAAGTTTT+GGG	+	chr4.3:85660252-85660271	None:intergenic	45.0%
!	ATCTGAAGCTGATCCATCAG+AGG	+	chr4.3:85660081-85660100	None:intergenic	45.0%
!	CAGTTGGTACTATGCTTCCT+CGG	-	chr4.3:85659566-85659585	MS.gene60236:CDS	45.0%
!	CTTGGAAGGTTTCTTGCTGT+TGG	-	chr4.3:85658466-85658485	MS.gene60236:CDS	45.0%
!	GGAGATGATATTGAGGTGCT+TGG	+	chr4.3:85659236-85659255	None:intergenic	45.0%
!!	CAAACGCTATGGAGCATTGA+AGG	+	chr4.3:85659485-85659504	None:intergenic	45.0%
!!	GCTTCATCACTTTTCGGACT+AGG	-	chr4.3:85660632-85660651	MS.gene60236:intron	45.0%
	AACGGTCACTCGTACAAAGC+CGG	+	chr4.3:85659757-85659776	None:intergenic	50.0%
	AAGGAGGAGGTCTTGCTTGT+GGG	+	chr4.3:85659368-85659387	None:intergenic	50.0%
	ACCTCGAGAGGTGGAAATGA+TGG	-	chr4.3:85660710-85660729	MS.gene60236:intron	50.0%
	AGCGATGCTCGACATAGTCT+TGG	+	chr4.3:85660615-85660634	None:intergenic	50.0%
	AGCTCAGAGGAAAACCGGTT+AGG	-	chr4.3:85660354-85660373	MS.gene60236:intron	50.0%
	AGGTCTTGCTTGTGGGATCA+TGG	+	chr4.3:85659361-85659380	None:intergenic	50.0%
	ATTCCAGCCGAGTTCTTAGG+TGG	+	chr4.3:85659810-85659829	None:intergenic	50.0%
	CAAAACTTCGAAGTTCCGGC+TGG	-	chr4.3:85660251-85660270	MS.gene60236:intron	50.0%
	CCGTTGCGGCTTATAAGAAC+AGG	-	chr4.3:85659772-85659791	MS.gene60236:CDS	50.0%
	CTCAACGATTTGAAGGGGCA+CGG	-	chr4.3:85658794-85658813	MS.gene60236:CDS	50.0%
	CTCGAAGCTCAGAGGAAAAC+CGG	-	chr4.3:85660349-85660368	MS.gene60236:intron	50.0%
	CTTTGTACGAGTGACCGTTG+CGG	-	chr4.3:85659758-85659777	MS.gene60236:CDS	50.0%
	GATTTCACTAGAGGAGGAGG+AGG	+	chr4.3:85658937-85658956	None:intergenic	50.0%
	GCGATGCTCGACATAGTCTT+GGG	+	chr4.3:85660614-85660633	None:intergenic	50.0%
	GGGAAGGGGAGATGATATTG+AGG	+	chr4.3:85659243-85659262	None:intergenic	50.0%
	TCAGTTGCAGGAATGCAAGG+AGG	+	chr4.3:85659384-85659403	None:intergenic	50.0%
	TCCATCATTTCCACCTCTCG+AGG	+	chr4.3:85660714-85660733	None:intergenic	50.0%
	TGGCTTATTGCCACAGTGAG+TGG	-	chr4.3:85660779-85660798	MS.gene60236:intron	50.0%
	TTGTGAGATTTCGACGGGAG+AGG	-	chr4.3:85658835-85658854	MS.gene60236:CDS	50.0%
!	CAGCCGGAACTTCGAAGTTT+TGG	+	chr4.3:85660253-85660272	None:intergenic	50.0%
!	CCCTGATAACCAAAGGGCAT+TGG	-	chr4.3:85659533-85659552	MS.gene60236:CDS	50.0%
!	CGAGAGGTGGAAATGATGGA+TGG	-	chr4.3:85660714-85660733	MS.gene60236:intron	50.0%
	ATGCTCCATAGCGTTTGGCG+CGG	-	chr4.3:85659488-85659507	MS.gene60236:CDS	55.0%
	CAAGGAGGAGGTCTTGCTTG+TGG	+	chr4.3:85659369-85659388	None:intergenic	55.0%
	CTACCACCTAAGAACTCGGC+TGG	-	chr4.3:85659804-85659823	MS.gene60236:CDS	55.0%
	GAAAGGGTAACCTCGAGAGG+TGG	-	chr4.3:85660701-85660720	MS.gene60236:intron	55.0%
	GTCGAAAGGGTAACCTCGAG+AGG	-	chr4.3:85660698-85660717	MS.gene60236:intron	55.0%
	GTTGCAGGAATGCAAGGAGG+AGG	+	chr4.3:85659381-85659400	None:intergenic	55.0%
!	CGGTTTTCCTCTGAGCTTCG+AGG	+	chr4.3:85660351-85660370	None:intergenic	55.0%
!	TTCGGACTAGGAATGGCCGT+AGG	-	chr4.3:85660644-85660663	MS.gene60236:intron	55.0%
	CCTCTAGCCTCGAAGCTCAG+AGG	-	chr4.3:85660341-85660360	MS.gene60236:intron	60.0%
	CCTCTGAGCTTCGAGGCTAG+AGG	+	chr4.3:85660344-85660363	None:intergenic	60.0%
	CATAGCGTTTGGCGCGGACC+AGG	-	chr4.3:85659494-85659513	MS.gene60236:CDS	65.0%
	CTGGTCCGCGCCAAACGCTA+TGG	+	chr4.3:85659496-85659515	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	85658358	85660940	85658358	ID=MS.gene60236
chr4.3	mRNA	85658358	85660940	85658358	ID=MS.gene60236.t1;Parent=MS.gene60236
chr4.3	exon	85660785	85660940	85660785	ID=MS.gene60236.t1.exon1;Parent=MS.gene60236.t1
chr4.3	CDS	85660785	85660940	85660785	ID=cds.MS.gene60236.t1;Parent=MS.gene60236.t1
chr4.3	exon	85659418	85659965	85659418	ID=MS.gene60236.t1.exon2;Parent=MS.gene60236.t1
chr4.3	CDS	85659418	85659965	85659418	ID=cds.MS.gene60236.t1;Parent=MS.gene60236.t1
chr4.3	exon	85658358	85659267	85658358	ID=MS.gene60236.t1.exon3;Parent=MS.gene60236.t1
chr4.3	CDS	85658358	85659267	85658358	ID=cds.MS.gene60236.t1;Parent=MS.gene60236.t1

Gene Sequence

>MS.gene60236

ATGGGGAGTTATAATCTTCATTTATCTAAAGCTACTCATATACTCCTTTTATCTGTTGCAACCACCAATTTCATGCCTCTTATTGGTGCTTTCATTGCTGATTCTCATCTTGGAAGGTTTCTTGCTGTTGGTTTAGGTTCTATCATCACTTTCATGGTAAGTAGACTACTTTTCATTTTTCCTATCATTATCATGTGAATGATTAACTTGTGTGGAAGAAGAGATGAATAGGATATGTATTTTGACTCATTTGCTAAAAAGCACCGACACAAACACTAGACATTTTAGAAAATGGAATTGATCGAATGTCCGTATCGTGTTGGTGTCAATATGGAGTGTCGGTGTTACATAGCTCATTTGTGGACCAATTGTTTCATTGTGAAGACAAGATTAATGGAGGGGATGGAAAGATTTTCAATGAATCTTTCTTGCTTGGCTCAACGATTTGAAGGGGCACGGCATCTATCCTCTCTAATATTGTGAGATTTCGACGGGAGAGGATACGTGTTTAAGATATTTTAAACATGTTGACTTTAATATAACATGAAAGTTTAGAGGTTGTAAAAAGTAATTAGTCCTCCTCCTCCTCTAGTGAAATCTCTCTCCTCGGTGAATCAAATAAAGATGATGCATTTAGGTGTGAAGAGCTTAACCAGATACTTATTTAATATTTGGCAATCTTAAAGAGCTTCTTTAATAACAGGTTATAGTAGAACTCTGCATAAGCTATGTATAAACTATTTTAGTAAGTTACTACTATGAGCTTATGAAATAAGCTTAAAATAGTTTATGAATACTTCATACGTTATGTTATAAACTCGTTCAAGCTCTTACATAAATGCTTACGTCAAAAGTTAAGCACAAAATAAGCTCTTCCAAGCACCTCAATATCATCTCCCCTTCCCTCATTTGTACCAAACAATGTAAATGATTTTGTATTGAAAAACAACTCAATTTTCTTCCTTTTGGTAACAGGGAATGATACTCTTGTGGCTAACAGCCATGATCCCACAAGCAAGACCTCCTCCTTGCATTCCTGCAACTGAAAAATGCATATCTGCAACAACTTCACAAATGGCAATGCTGATTTCTTCCCTTGCTCTTATGTCCATTGGAAATGGTGGCCTTCAATGCTCCATAGCGTTTGGCGCGGACCAGGTGAATAGAAAAGATAACCCTGATAACCAAAGGGCATTGGAAATATTCTTCAGTTGGTACTATGCTTCCTCGGCTATTTCTGTCATAATTGCATTCACGGGAATAGTATATATCCAAGATCATCTTGGATGGAAACTTGGTTTTGGTGTTCCAGCAACACTTATGTTCTTTTCCACTTTCTTCTTTTTTCTTGCTTCTCCACTTTATGTAAAGAATAAAACAAATAGCACCTTGTTTACCGGCTTTGTACGAGTGACCGTTGCGGCTTATAAGAACAGGAAAATTCGACTACCACCTAAGAACTCGGCTGGAATGTATCATCATATAAAGGATTCTGAACTTACTGTTCCAACTGATAAAATAAGGTTGAATCACTTGCATATTCACATTAGTATTAGAGTCCCTACATTTAGATAAGTTGATATTCAAATTATTGCCAATTTTTGTTGTCATTTTGTGTTAAAATATCATTATGTATTAATATACTGAATTTGTGGTAATGCTTTGTTTTCTAGGTTTCTGAATAAAGCTTGCTTCATTAGAAGTCCAGAAAAAGACATAACCTCTGATGGATCAGCTTCAGATCCTTGGAGTCTATGCACAATTGATCAAGTAGAAGAATTAAAAGCTATCATTAAAGTTATTCCACTGTGGTCTACAAGCATCTTGATGTCACTTAACATTGGAGGCTCATTTGGATTACTGCAAGCGAAATCGCTGAACAGACACATAACCCAAAACTTCGAAGTTCCGGCTGGTTCACTTAGTGTAATCATGATATTCACAATATTTATATGGATAGCTCTTTATGATCGTGTCGTTATTCCTCTAGCCTCGAAGCTCAGAGGAAAACCGGTTAGGATTAGTGCAAAGACAAGAATGGGACTTGGATTGTTTTTCTCTTTTCTTCACTTGGTAACTGCAGCAATTGTCGAGACTATAAGGCGAAGAAGAGCAATCAATGAAGGATATGGTAATGATCCTCATTCAGTGTTGAACATGTCTGCAATGTGGCTTTTTCCTCAACTTTGCTTGGGTGGAATAGCTGAAGCATTCAATGTTATAGGCCAAAATGAGTTCTACTATACCGAATTTCCCAAGACTATGTCGAGCATCGCTTCATCACTTTTCGGACTAGGAATGGCCGTAGGATACATTATATCTTCTTTTTTATTCAGCATTGTCGAAAGGGTAACCTCGAGAGGTGGAAATGATGGATGGATATCGGATAATATTAACAAGGGCCGATTCGACAAGTATTATTGGCTTATTGCCACAGTGAGTGGTCTTAATATACTGTATTATGTAGTATGTAGTTGGGCTTATGGACCTACTGCTGATGTAGAATCAAAAGTAAGTGAAGATGAGGAAGAATTGCCATTAATTGACTTCAGAAATGAGGGTTCATATGACAAGGATAACTGA

Protein sequence

>MS.gene60236.t1

MGSYNLHLSKATHILLLSVATTNFMPLIGAFIADSHLGRFLAVGLGSIITFMGMILLWLTAMIPQARPPPCIPATEKCISATTSQMAMLISSLALMSIGNGGLQCSIAFGADQVNRKDNPDNQRALEIFFSWYYASSAISVIIAFTGIVYIQDHLGWKLGFGVPATLMFFSTFFFFLASPLYVKNKTNSTLFTGFVRVTVAAYKNRKIRLPPKNSAGMYHHIKDSELTVPTDKIRFLNKACFIRSPEKDITSDGSASDPWSLCTIDQVEELKAIIKVIPLWSTSILMSLNIGGSFGLLQAKSLNRHITQNFEVPAGSLSVIMIFTIFIWIALYDRVVIPLASKLRGKPVRISAKTRMGLGLFFSFLHLVTAAIVETIRRRRAINEGYGNDPHSVLNMSAMWLFPQLCLGGIAEAFNVIGQNEFYYTEFPKTMSSIASSLFGLGMAVGYIISSFLFSIVERVTSRGGNDGWISDNINKGRFDKYYWLIATVSGLNILYYVVCSWAYGPTADVESKVSEDEEELPLIDFRNEGSYDKDN