AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036797

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036797.t1 MTR_4g114340 97.241 580 12 2 1 579 1 577 0.0 1145
MS.gene036797.t1 MTR_5g012290 56.993 572 220 8 8 562 11 573 0.0 615
MS.gene036797.t1 MTR_4g101380 56.021 573 227 10 8 562 11 576 0.0 597
MS.gene036797.t1 MTR_5g012270 52.189 571 247 7 9 562 14 575 0.0 594
MS.gene036797.t1 MTR_5g085850 50.633 553 254 8 12 559 18 556 1.23e-173 504
MS.gene036797.t1 MTR_4g015080 44.658 571 294 11 2 560 12 572 2.67e-160 470
MS.gene036797.t1 MTR_7g067010 43.333 570 305 10 1 560 1 562 3.39e-157 462
MS.gene036797.t1 MTR_3g462710 41.404 570 318 7 1 560 1 564 1.23e-150 445
MS.gene036797.t1 MTR_3g112470 41.324 559 300 8 13 560 12 553 4.57e-148 439
MS.gene036797.t1 MTR_3g112460 40.575 557 307 7 13 560 12 553 1.05e-147 438
MS.gene036797.t1 MTR_5g055000 40.575 557 314 6 16 560 10 561 3.57e-144 429
MS.gene036797.t1 MTR_7g098200 38.908 586 333 7 4 574 9 584 1.00e-141 423
MS.gene036797.t1 MTR_3g112450 41.815 562 301 10 10 560 9 555 9.38e-141 420
MS.gene036797.t1 MTR_7g098200 39.138 580 330 7 4 574 9 574 2.36e-140 419
MS.gene036797.t1 MTR_5g014150 39.478 575 323 9 8 568 28 591 3.56e-138 414
MS.gene036797.t1 MTR_7g098040 39.753 566 318 6 4 556 14 569 3.95e-137 412
MS.gene036797.t1 MTR_7g098160 38.660 582 330 8 4 568 13 584 2.08e-136 410
MS.gene036797.t1 MTR_7g098230 38.721 563 319 8 31 578 33 584 2.75e-135 407
MS.gene036797.t1 MTR_1g041835 40.426 564 312 7 6 556 9 561 3.08e-133 401
MS.gene036797.t1 MTR_4g098800 37.345 565 340 7 2 557 14 573 6.69e-132 398
MS.gene036797.t1 MTR_1g041815 39.716 564 316 6 6 556 9 561 1.50e-131 397
MS.gene036797.t1 MTR_1g075440 38.004 571 329 6 4 559 8 568 3.22e-131 396
MS.gene036797.t1 MTR_4g098800 37.345 565 340 7 2 557 79 638 3.90e-131 398
MS.gene036797.t1 MTR_1g042310 38.095 567 332 5 1 556 3 561 1.28e-130 395
MS.gene036797.t1 MTR_7g098180 37.308 587 344 6 6 578 13 589 1.01e-129 392
MS.gene036797.t1 MTR_7g098090 37.710 594 338 9 4 575 13 596 1.41e-129 392
MS.gene036797.t1 MTR_7g098220 38.644 590 328 8 6 571 12 591 5.90e-129 390
MS.gene036797.t1 MTR_1g041875 39.130 552 311 6 1 540 3 541 6.39e-129 390
MS.gene036797.t1 MTR_1g116930 38.095 546 321 8 20 557 19 555 1.81e-127 386
MS.gene036797.t1 MTR_3g100980 38.380 568 318 9 19 571 11 561 4.87e-127 385
MS.gene036797.t1 MTR_7g088825 36.491 570 343 9 20 577 18 580 7.59e-127 385
MS.gene036797.t1 MTR_2g005130 38.616 549 315 11 13 556 29 560 2.31e-126 384
MS.gene036797.t1 MTR_2g017750 36.851 597 351 11 1 576 11 602 2.58e-125 381
MS.gene036797.t1 MTR_7g010820 37.676 568 334 9 8 560 10 572 5.81e-125 380
MS.gene036797.t1 MTR_4g019580 36.788 579 350 8 1 572 13 582 1.76e-124 379
MS.gene036797.t1 MTR_7g005930 36.380 558 336 8 8 557 21 567 1.90e-124 379
MS.gene036797.t1 MTR_8g087810 39.249 586 332 11 1 566 1 582 1.66e-123 376
MS.gene036797.t1 MTR_3g100980 36.745 596 317 10 19 571 11 589 5.14e-122 372
MS.gene036797.t1 MTR_3g069500 37.478 563 330 9 3 559 14 560 3.56e-121 370
MS.gene036797.t1 MTR_7g088790 35.800 581 351 10 9 577 14 584 1.18e-120 370
MS.gene036797.t1 MTR_1g042310 38.140 527 307 5 41 556 6 524 4.10e-120 366
MS.gene036797.t1 MTR_7g098220 38.739 555 306 8 41 571 3 547 9.14e-120 365
MS.gene036797.t1 MTR_3g069420 36.655 562 338 8 7 559 17 569 1.15e-119 366
MS.gene036797.t1 MTR_7g006540 36.254 582 336 10 21 578 60 630 5.36e-119 366
MS.gene036797.t1 MTR_7g065080 35.929 565 342 8 2 560 9 559 6.02e-119 364
MS.gene036797.t1 MTR_7g088820 34.636 563 349 9 11 561 14 569 1.00e-118 364
MS.gene036797.t1 MTR_8g087780 38.000 550 316 12 1 530 1 545 1.38e-118 363
MS.gene036797.t1 MTR_1g042310 38.196 521 303 5 47 556 5 517 2.21e-118 362
MS.gene036797.t1 MTR_7g013270 35.870 552 335 8 16 557 82 624 4.63e-118 364
MS.gene036797.t1 MTR_1g041885 39.010 505 286 5 47 542 5 496 6.21e-118 360
MS.gene036797.t1 MTR_5g038060 39.564 551 318 6 22 559 29 577 3.63e-117 360
MS.gene036797.t1 MTR_3g462710 41.928 446 244 6 125 560 15 455 7.64e-117 355
MS.gene036797.t1 MTR_4g033325 39.493 552 303 8 9 553 16 543 1.10e-116 357
MS.gene036797.t1 MTR_3g069440 37.345 565 330 9 7 559 16 568 4.19e-116 357
MS.gene036797.t1 MTR_0294s0020 38.739 555 305 9 8 553 15 543 1.73e-115 354
MS.gene036797.t1 MTR_4g033315 38.739 555 305 9 9 553 16 545 1.75e-115 354
MS.gene036797.t1 MTR_4g033310 38.739 555 305 9 9 553 16 545 1.75e-115 354
MS.gene036797.t1 MTR_1g085090 36.727 550 326 9 22 564 17 551 2.87e-114 353
MS.gene036797.t1 MTR_4g033330 38.532 545 305 9 1 538 9 530 6.12e-114 350
MS.gene036797.t1 MTR_4g107670 36.177 586 325 12 13 569 13 578 2.08e-113 350
MS.gene036797.t1 MTR_3g072300 36.602 571 342 8 1 560 1 562 3.61e-113 349
MS.gene036797.t1 MTR_8g469310 37.297 555 338 6 13 557 15 569 5.04e-113 348
MS.gene036797.t1 MTR_4g107580 34.642 586 360 12 1 569 4 583 8.29e-113 349
MS.gene036797.t1 MTR_7g111260 37.248 545 320 9 22 559 17 546 2.41e-112 347
MS.gene036797.t1 MTR_7g098200 38.950 457 256 6 113 556 4 450 2.69e-111 341
MS.gene036797.t1 MTR_7g088820 35.156 512 315 8 62 561 1 507 1.64e-110 341
MS.gene036797.t1 MTR_8g469480 37.912 546 324 6 27 559 41 584 3.88e-110 342
MS.gene036797.t1 MTR_3g005010 37.024 551 307 9 8 549 14 533 7.18e-110 340
MS.gene036797.t1 MTR_4g107510 36.232 552 329 10 27 560 39 585 1.04e-109 341
MS.gene036797.t1 MTR_4g033375 38.447 515 281 9 1 504 9 498 2.79e-109 337
MS.gene036797.t1 MTR_5g038380 36.063 574 320 10 13 557 17 572 3.06e-109 339
MS.gene036797.t1 MTR_8g469470 34.464 560 349 7 16 559 24 581 7.90e-108 335
MS.gene036797.t1 MTR_4g107530 34.215 567 354 8 14 564 23 586 9.07e-107 333
MS.gene036797.t1 MTR_4g033395 37.864 515 284 9 1 504 9 498 2.82e-104 323
MS.gene036797.t1 MTR_4g011280 33.457 541 349 9 26 558 34 571 1.79e-99 314
MS.gene036797.t1 MTR_8g038880 34.532 556 323 11 23 560 19 551 1.98e-99 313
MS.gene036797.t1 MTR_5g038190 32.432 555 362 6 16 559 16 568 1.33e-98 311
MS.gene036797.t1 MTR_7g088820 34.416 462 286 8 112 561 3 459 4.98e-98 307
MS.gene036797.t1 MTR_8g103233 35.649 547 344 7 16 556 9 553 9.99e-98 309
MS.gene036797.t1 MTR_7g065080 35.124 484 294 8 83 560 3 472 1.02e-97 306
MS.gene036797.t1 MTR_4g123537 35.472 561 328 12 14 560 31 571 1.12e-97 310
MS.gene036797.t1 MTR_7g098150 37.872 470 269 6 4 460 13 472 1.95e-97 305
MS.gene036797.t1 MTR_2g093180 34.552 547 326 10 23 557 20 546 3.69e-96 304
MS.gene036797.t1 MTR_4g107610 32.348 575 369 11 18 577 25 594 1.41e-95 304
MS.gene036797.t1 MTR_2g101590 32.088 589 384 11 1 577 1 585 3.62e-94 301
MS.gene036797.t1 MTR_2g093160 33.211 545 335 9 23 557 20 545 4.37e-94 299
MS.gene036797.t1 MTR_2g101650 30.458 568 382 10 1 558 1 565 2.98e-93 298
MS.gene036797.t1 MTR_2g101640 31.690 568 374 10 1 558 1 564 5.52e-93 298
MS.gene036797.t1 MTR_3g014790 32.867 572 336 12 21 569 14 560 3.53e-92 294
MS.gene036797.t1 MTR_4g024930 33.036 560 339 9 8 557 20 553 1.04e-91 293
MS.gene036797.t1 MTR_2g101610 31.641 591 385 12 1 577 1 586 1.79e-90 292
MS.gene036797.t1 MTR_2g093640 32.188 553 340 9 18 557 15 545 1.18e-86 279
MS.gene036797.t1 MTR_4g033325 37.225 454 254 8 107 553 16 445 5.25e-86 275
MS.gene036797.t1 MTR_1g009200 31.319 546 362 8 22 558 25 566 1.30e-84 275
MS.gene036797.t1 MTR_4g033325 37.767 421 241 6 140 553 13 419 1.52e-84 270
MS.gene036797.t1 MTR_1g057460 31.338 568 355 12 1 558 24 566 8.70e-84 273
MS.gene036797.t1 MTR_4g033385 36.166 459 257 9 106 553 13 446 9.46e-84 269
MS.gene036797.t1 MTR_7g064780 30.922 553 365 10 14 553 16 564 4.70e-83 271
MS.gene036797.t1 MTR_7g098210 31.749 526 254 10 43 553 1 436 4.06e-80 259
MS.gene036797.t1 MTR_1g026740 31.216 551 363 10 20 560 13 557 7.17e-80 262
MS.gene036797.t1 MTR_7g064800 31.754 570 367 12 1 553 2 566 8.12e-80 263
MS.gene036797.t1 MTR_2g101560 29.949 591 396 11 1 577 1 587 2.02e-78 260
MS.gene036797.t1 MTR_1g026750 31.552 580 372 12 11 578 3 569 2.06e-78 258
MS.gene036797.t1 MTR_1g057460 31.335 517 323 9 52 558 1 495 2.77e-78 256
MS.gene036797.t1 MTR_7g052600 34.234 555 315 13 11 556 12 525 3.85e-78 256
MS.gene036797.t1 MTR_0236s0050 31.721 517 321 9 52 558 1 495 4.36e-78 255
MS.gene036797.t1 MTR_7g051880 33.686 567 323 15 1 556 1 525 1.51e-77 254
MS.gene036797.t1 MTR_1g026770 31.136 546 357 12 26 560 17 554 1.24e-76 253
MS.gene036797.t1 MTR_7g051830 33.569 566 325 14 1 556 1 525 2.56e-76 251
MS.gene036797.t1 MTR_6g008690 31.022 548 333 10 33 560 16 538 1.36e-71 239
MS.gene036797.t1 MTR_4g033310 36.957 276 159 4 283 553 216 481 3.02e-52 186
MS.gene036797.t1 MTR_4g033310 45.604 182 89 2 9 190 16 187 4.67e-36 141
MS.gene036797.t1 MTR_1g009170 25.879 398 237 10 150 538 9 357 1.70e-32 129
MS.gene036797.t1 MTR_3g065350 33.540 161 102 2 331 490 1 157 7.37e-22 93.2
MS.gene036797.t1 MTR_8g091265 32.331 133 78 6 289 413 3 131 2.09e-15 73.9
MS.gene036797.t1 MTR_2g093650 26.866 201 91 5 336 535 31 176 2.52e-12 67.0
MS.gene036797.t1 MTR_4g033390 37.500 80 50 0 474 553 30 109 2.52e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036797.t1 AT2G26690 76.817 578 131 2 1 577 1 576 0.0 857
MS.gene036797.t1 AT2G26690 76.611 543 124 2 36 577 3 543 0.0 796
MS.gene036797.t1 AT2G26690 76.360 533 123 2 46 577 1 531 0.0 779
MS.gene036797.t1 AT1G12110 54.389 581 237 6 11 568 14 589 0.0 604
MS.gene036797.t1 AT3G21670 49.820 556 259 7 11 559 16 558 1.69e-175 509
MS.gene036797.t1 AT3G54140 42.004 569 316 7 1 560 1 564 1.31e-158 466
MS.gene036797.t1 AT3G54140 42.004 569 316 7 1 560 1 564 1.31e-158 466
MS.gene036797.t1 AT5G01180 41.021 568 320 8 2 560 3 564 1.63e-153 452
MS.gene036797.t1 AT5G01180 41.021 568 320 8 2 560 3 564 1.63e-153 452
MS.gene036797.t1 AT5G01180 41.021 568 320 8 2 560 3 564 1.63e-153 452
MS.gene036797.t1 AT2G02040 41.145 559 314 7 12 560 29 582 1.67e-148 440
MS.gene036797.t1 AT1G62200 38.172 558 326 6 12 559 40 588 9.22e-136 408
MS.gene036797.t1 AT4G21680 39.153 567 335 5 8 564 12 578 3.90e-134 404
MS.gene036797.t1 AT1G68570 40.381 577 322 10 16 578 17 585 1.38e-132 400
MS.gene036797.t1 AT1G68570 40.721 555 309 8 38 578 7 555 1.85e-131 396
MS.gene036797.t1 AT1G32450 37.543 586 343 8 13 578 26 608 3.30e-131 397
MS.gene036797.t1 AT1G62200 36.552 580 320 7 12 552 40 610 5.13e-130 394
MS.gene036797.t1 AT1G62200 36.552 580 320 7 12 552 54 624 7.97e-130 394
MS.gene036797.t1 AT1G59740 38.078 562 315 11 11 555 28 573 1.19e-127 387
MS.gene036797.t1 AT2G02020 36.832 543 301 8 12 550 30 534 8.31e-123 373
MS.gene036797.t1 AT5G46040 37.591 548 316 9 7 540 10 545 1.37e-118 363
MS.gene036797.t1 AT1G69870 37.091 550 330 8 22 559 49 594 2.31e-118 364
MS.gene036797.t1 AT5G13400 35.689 566 339 8 13 559 52 611 5.02e-118 363
MS.gene036797.t1 AT5G46050 37.500 544 314 9 6 535 9 540 4.84e-117 359
MS.gene036797.t1 AT1G27040 37.251 553 331 7 14 560 17 559 3.82e-116 357
MS.gene036797.t1 AT5G19640 35.009 557 336 8 25 573 60 598 6.84e-116 357
MS.gene036797.t1 AT1G27040 37.251 553 331 7 14 560 13 555 7.29e-116 355
MS.gene036797.t1 AT1G33440 37.937 572 327 10 12 571 26 581 1.45e-115 356
MS.gene036797.t1 AT3G53960 33.333 582 375 7 2 576 15 590 2.90e-114 353
MS.gene036797.t1 AT1G69850 36.163 589 330 10 1 557 3 577 2.93e-113 350
MS.gene036797.t1 AT3G54450 34.107 560 330 9 21 562 9 547 3.68e-111 343
MS.gene036797.t1 AT1G27040 37.476 531 316 7 36 560 7 527 2.97e-110 340
MS.gene036797.t1 AT2G37900 32.923 568 364 6 2 564 16 571 4.69e-110 341
MS.gene036797.t1 AT2G40460 35.076 593 353 9 1 579 1 575 1.59e-108 337
MS.gene036797.t1 AT1G18880 35.548 557 337 12 21 559 14 566 1.38e-107 335
MS.gene036797.t1 AT5G62680 33.164 591 373 9 6 578 25 611 1.13e-105 331
MS.gene036797.t1 AT1G22540 36.234 563 316 11 13 560 19 553 3.02e-103 323
MS.gene036797.t1 AT5G62730 34.526 559 325 10 13 555 45 578 2.28e-101 319
MS.gene036797.t1 AT1G72140 33.450 571 323 10 12 562 22 555 1.14e-100 316
MS.gene036797.t1 AT1G22550 34.690 565 339 10 8 560 14 560 2.75e-100 315
MS.gene036797.t1 AT1G22570 35.490 541 320 8 9 537 15 538 5.65e-100 315
MS.gene036797.t1 AT2G02020 33.517 543 298 10 12 550 30 513 3.22e-99 311
MS.gene036797.t1 AT1G27080 34.291 557 327 11 22 559 12 548 8.18e-98 309
MS.gene036797.t1 AT3G47960 33.922 566 352 9 11 559 48 608 1.67e-97 310
MS.gene036797.t1 AT5G62730 34.381 541 314 10 31 555 4 519 4.51e-96 303
MS.gene036797.t1 AT1G72125 34.539 553 332 11 9 550 14 547 4.94e-96 304
MS.gene036797.t1 AT1G72120 35.242 559 316 11 9 550 14 543 2.12e-95 302
MS.gene036797.t1 AT1G52190 31.173 571 376 9 22 578 19 586 4.40e-95 303
MS.gene036797.t1 AT1G72130 33.895 534 316 7 22 550 23 524 7.73e-95 300
MS.gene036797.t1 AT3G45660 33.037 563 354 11 3 560 20 564 2.54e-94 300
MS.gene036797.t1 AT3G45660 33.032 554 349 10 11 560 8 543 3.06e-94 299
MS.gene036797.t1 AT3G45660 33.032 554 349 10 11 560 8 543 3.06e-94 299
MS.gene036797.t1 AT2G37900 32.803 503 321 6 67 564 2 492 5.46e-94 297
MS.gene036797.t1 AT3G16180 32.118 576 368 12 19 578 17 585 7.50e-94 299
MS.gene036797.t1 AT5G46050 38.215 437 244 9 113 535 4 428 7.10e-93 293
MS.gene036797.t1 AT3G45680 32.014 556 351 10 17 566 15 549 4.09e-92 294
MS.gene036797.t1 AT3G45650 31.986 569 364 11 10 573 7 557 2.77e-91 291
MS.gene036797.t1 AT1G22570 34.623 517 309 8 33 537 2 501 2.31e-89 286
MS.gene036797.t1 AT1G27080 34.160 524 306 11 55 559 3 506 1.34e-88 284
MS.gene036797.t1 AT3G45710 30.565 566 355 11 10 562 7 547 1.14e-87 282
MS.gene036797.t1 AT3G25260 33.578 545 319 10 14 557 11 513 2.50e-87 280
MS.gene036797.t1 AT3G45650 30.588 595 364 12 10 573 7 583 3.03e-86 279
MS.gene036797.t1 AT3G25280 33.575 551 317 12 14 557 11 519 5.36e-85 274
MS.gene036797.t1 AT3G45700 30.216 556 356 9 14 562 5 535 5.93e-84 272
MS.gene036797.t1 AT3G45720 28.986 552 368 8 14 560 9 541 1.07e-83 272
MS.gene036797.t1 AT5G28470 29.891 552 369 11 22 562 15 559 3.72e-83 270
MS.gene036797.t1 AT5G28470 29.401 551 371 11 22 562 15 557 1.69e-80 263
MS.gene036797.t1 AT5G14940 31.694 549 334 10 31 559 14 541 5.96e-77 254
MS.gene036797.t1 AT1G69860 31.330 549 353 8 22 560 16 550 1.14e-74 248
MS.gene036797.t1 AT3G45690 28.729 543 323 13 23 560 17 500 7.63e-72 239
MS.gene036797.t1 AT1G72130 32.093 430 261 7 126 550 3 406 2.60e-71 235
MS.gene036797.t1 AT1G72130 32.093 430 261 7 126 550 3 406 2.60e-71 235
MS.gene036797.t1 AT3G01350 30.811 555 334 14 31 555 14 548 3.10e-70 236
MS.gene036797.t1 AT5G11570 26.667 525 304 13 34 552 23 472 6.77e-47 171
MS.gene036797.t1 AT2G38100 28.709 519 320 15 52 556 2 484 9.30e-44 163
MS.gene036797.t1 AT2G38100 28.627 517 323 14 52 556 18 500 2.05e-43 162
MS.gene036797.t1 AT2G38100 28.627 517 323 14 52 556 24 506 2.34e-43 162

Find 152 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCTTAAATCTAGTATTTC+AGG 0.144252 8.1:-12436285 MS.gene036797:CDS
ATCCTGAAATACTAGATTTA+AGG 0.183872 8.1:+12436283 None:intergenic
GGGCCACAACCATTATATTT+TGG 0.187180 8.1:-12435616 MS.gene036797:CDS
CAATTCTTCTTGGTTGGTTC+TGG 0.203632 8.1:-12434952 MS.gene036797:CDS
TCTAGTCCCACAATTCTTCT+TGG 0.215898 8.1:-12434962 MS.gene036797:CDS
CATGGCAAGGTGGTGGCCTT+AGG 0.228266 8.1:+12436391 None:intergenic
TCACCTCTTCTACCCTTGTT+AGG 0.254401 8.1:+12435666 None:intergenic
TGGAATATGTTCTATTTCTA+TGG 0.255855 8.1:-12436106 MS.gene036797:CDS
ATTCTTCTTCTTCATCAGTT+TGG 0.266174 8.1:-12436193 MS.gene036797:CDS
TGGTTAGACTTCTACCAATA+TGG 0.274532 8.1:-12435637 MS.gene036797:CDS
AAATCTAGTATTTCAGGATT+TGG 0.277329 8.1:-12436279 MS.gene036797:CDS
GACAAGGATTTATATGGTTC+TGG 0.282095 8.1:-12435713 MS.gene036797:CDS
CAAGCCTGCCCTTGTTTATA+TGG 0.282158 8.1:+12434746 None:intergenic
ATAGATGGCTTAGGTTTCTT+AGG 0.284117 8.1:+12434646 None:intergenic
TTCTTCTTCTTCATCAGTTT+GGG 0.297438 8.1:-12436192 MS.gene036797:CDS
TCATTTCTCCTTTGTTTGCT+TGG 0.306256 8.1:-12436927 MS.gene036797:CDS
ACTTGGAAAATGTGGACAAT+AGG 0.330026 8.1:+12436018 None:intergenic
TGGAACCCAGCCACCAGTTT+TGG 0.334453 8.1:+12438448 None:intergenic
GTAAGTAGAAGTTGGGCTTA+TGG 0.338154 8.1:-12436126 MS.gene036797:CDS
ACTAGAAGGAAAACACTAAT+TGG 0.343468 8.1:+12434979 None:intergenic
CTTGGAAGATATAAAACAAT+TGG 0.344688 8.1:-12436882 MS.gene036797:CDS
ATACAGATACAAGAAGAGTT+TGG 0.356385 8.1:-12436046 MS.gene036797:CDS
GAGCATAGCTTCCAAGGGTT+TGG 0.361299 8.1:+12435689 None:intergenic
TAATACTGTGACTGACTTCA+TGG 0.374908 8.1:-12436955 MS.gene036797:CDS
CACCTCTTCTACCCTTGTTA+GGG 0.378746 8.1:+12435667 None:intergenic
CACCAGTTCCTAGTGCAATA+AGG 0.382180 8.1:+12436307 None:intergenic
TCAGTGGCAAAAGGCGTAAA+AGG 0.388045 8.1:-12435018 MS.gene036797:CDS
TTTCTAGCAGATTCCTTCCT+TGG 0.391028 8.1:-12436900 MS.gene036797:CDS
TACAGATACAAGAAGAGTTT+GGG 0.391432 8.1:-12436045 MS.gene036797:CDS
TTTCTCCTTTGTTTGCTTGG+AGG 0.391606 8.1:-12436924 MS.gene036797:CDS
TTATCGATGCAACAATAACT+TGG 0.394460 8.1:+12436001 None:intergenic
CGCTGGCTTGCAACTTTCAC+CGG 0.394881 8.1:+12436368 None:intergenic
CACTAATTGGTAGTGTTGTT+TGG 0.395122 8.1:+12434992 None:intergenic
ACCTAAGCCATCTATGCAAA+TGG 0.396355 8.1:-12434638 MS.gene036797:CDS
TGTTCTATTCTTGAATCCTC+TGG 0.397029 8.1:+12435925 None:intergenic
TCCTGATAGGAATATCAAAA+TGG 0.398389 8.1:+12436077 None:intergenic
AGAAGAATTGTGGGACTAGA+AGG 0.401620 8.1:+12434965 None:intergenic
CCCATTTGGATTCCATTCGC+TGG 0.403138 8.1:+12436351 None:intergenic
TCCATTCAATTTCTTCCAAA+GGG 0.406146 8.1:+12435439 None:intergenic
TACAAAGATCCAACATTGTA+TGG 0.407148 8.1:+12435958 None:intergenic
TCAGTTGTGAAGAAAGTAAC+TGG 0.409941 8.1:-12434799 MS.gene036797:CDS
CCCATTTGCATAGATGGCTT+AGG 0.413131 8.1:+12434637 None:intergenic
CCTAAGCCATCTATGCAAAT+GGG 0.414839 8.1:-12434637 MS.gene036797:CDS
AACATTCCTTTCCATGGTGG+TGG 0.417119 8.1:+12435553 None:intergenic
AAAGTTGATGAAACTAAGTA+TGG 0.422051 8.1:+12434702 None:intergenic
GTCCCACAATTCTTCTTGGT+TGG 0.423337 8.1:-12434958 MS.gene036797:CDS
GGAGATGCTGTGGACTATAA+AGG 0.424762 8.1:-12438488 MS.gene036797:CDS
CCCCTTTGGAAGAAATTGAA+TGG 0.428133 8.1:-12435440 MS.gene036797:CDS
TCCAAAGGGGCATGATGATT+CGG 0.430029 8.1:+12435453 None:intergenic
CTTGGAAAATGTGGACAATA+GGG 0.430738 8.1:+12436019 None:intergenic
ATGGCAAGGTGGTGGCCTTA+GGG 0.431567 8.1:+12436392 None:intergenic
TACCTTATTGCACTAGGAAC+TGG 0.433485 8.1:-12436309 MS.gene036797:CDS
ACCGAATCATCATGCCCCTT+TGG 0.434665 8.1:-12435454 MS.gene036797:CDS
TTCCTAACAACTTTATCCCT+CGG 0.445864 8.1:-12434847 MS.gene036797:CDS
ATAATGGTTGTGGCCCATAT+TGG 0.449007 8.1:+12435623 None:intergenic
TTCCATTCAATTTCTTCCAA+AGG 0.450602 8.1:+12435438 None:intergenic
TGTATCTTGTAGTTCCTGAT+AGG 0.454249 8.1:+12436064 None:intergenic
ATGGTTCTGGTCCAAACCCT+TGG 0.455816 8.1:-12435700 MS.gene036797:CDS
TAGAACACACTGAACAGTTC+CGG 0.459831 8.1:-12435909 MS.gene036797:intron
AAAGCAGCAATTGTGGTAGA+AGG 0.462361 8.1:-12435743 MS.gene036797:CDS
AAGATGAAGTAAGTAGAAGT+TGG 0.463675 8.1:-12436134 MS.gene036797:CDS
CATGGGGATTGCAGTCAACT+TGG 0.470281 8.1:-12437024 MS.gene036797:CDS
AAGAAAATGAGTTGGACTGT+TGG 0.470943 8.1:-12438509 MS.gene036797:CDS
ATAGGTCCAAAACTGGTGGC+TGG 0.475628 8.1:-12438454 MS.gene036797:CDS
ACAAGTATAAGACTCCCATT+TGG 0.476254 8.1:+12436337 None:intergenic
CCACCATGGAAAGGAATGTT+GGG 0.477357 8.1:-12435550 MS.gene036797:CDS
GTCCAATGGCGATCCTTTGT+AGG 0.479952 8.1:+12435097 None:intergenic
GCCAGCGAATGGAATCCAAA+TGG 0.480150 8.1:-12436352 MS.gene036797:CDS
AACCGAGGGATAAAGTTGTT+AGG 0.483555 8.1:+12434845 None:intergenic
ATAAAGGCTCCCCTGCTGAT+AGG 0.484623 8.1:-12438472 MS.gene036797:CDS
AAACCTAAAATGAGAGCAGC+TGG 0.485394 8.1:+12438428 None:intergenic
GTTAGGGAGCATAGCTTCCA+AGG 0.486306 8.1:+12435683 None:intergenic
CCTGCTGATAGGTCCAAAAC+TGG 0.487711 8.1:-12438461 MS.gene036797:CDS
AGATGAAGTAAGTAGAAGTT+GGG 0.491479 8.1:-12436133 MS.gene036797:CDS
CTTCTCTGATTGAAGTGAAA+CGG 0.493028 8.1:-12435044 MS.gene036797:CDS
GTATTAGCTGCAGTTGAGCT+TGG 0.496577 8.1:+12436972 None:intergenic
ACCACCATGGAAAGGAATGT+TGG 0.499867 8.1:-12435551 MS.gene036797:CDS
AGGCCACCACCTTGCCATGC+CGG 0.501352 8.1:-12436387 MS.gene036797:CDS
TCACCGGCATGGCAAGGTGG+TGG 0.501918 8.1:+12436384 None:intergenic
GGTTAGACTTCTACCAATAT+GGG 0.502787 8.1:-12435636 MS.gene036797:CDS
ATTCCCAACATTCCTTTCCA+TGG 0.502865 8.1:+12435547 None:intergenic
ATATGTGGTCCAAAATATAA+TGG 0.504670 8.1:+12435607 None:intergenic
GGAAGCTATGCTCCCTAACA+AGG 0.510403 8.1:-12435679 MS.gene036797:CDS
GCTTGCAACTTTCACCGGCA+TGG 0.511684 8.1:+12436373 None:intergenic
CAACAATAACTTGGAAAATG+TGG 0.519067 8.1:+12436010 None:intergenic
AACCAACCAAGAAGAATTGT+GGG 0.522670 8.1:+12434956 None:intergenic
TTGTTGCATCGATAAAGAAA+AGG 0.524528 8.1:-12435993 MS.gene036797:CDS
CCAGCGAATGGAATCCAAAT+GGG 0.527069 8.1:-12436351 MS.gene036797:CDS
TTCAGGAGAAGAAAATGAGT+TGG 0.527510 8.1:-12438517 MS.gene036797:intron
CAACTTGGTGACATATCTGA+TGG 0.528916 8.1:-12437009 MS.gene036797:CDS
GTTGAGAGGCTCTCCACCAT+GGG 0.533920 8.1:-12437041 MS.gene036797:CDS
AAAGTAACTGGGACTAGAGA+TGG 0.533924 8.1:-12434787 MS.gene036797:CDS
AACCTACAAAGGATCGCCAT+TGG 0.541778 8.1:-12435099 MS.gene036797:CDS
AAACGGTTGTCAGTGGCAAA+AGG 0.542160 8.1:-12435027 MS.gene036797:CDS
ATTTGATGAGAAAGATGAGA+AGG 0.544100 8.1:-12436247 MS.gene036797:CDS
CAAGGTGGTGGCCTTAGGGA+TGG 0.546240 8.1:+12436396 None:intergenic
ATCGATAAAGAAAAGGAAGA+TGG 0.547971 8.1:-12435986 MS.gene036797:CDS
GAACCAACCAAGAAGAATTG+TGG 0.548664 8.1:+12434955 None:intergenic
CTTTCTTCACAACTGACACA+AGG 0.551322 8.1:+12434806 None:intergenic
CAACTTTCACCGGCATGGCA+AGG 0.551655 8.1:+12436378 None:intergenic
AATGGCGATCCTTTGTAGGT+TGG 0.552334 8.1:+12435101 None:intergenic
GAAAGTTGCAAGCCAGCGAA+TGG 0.557492 8.1:-12436363 MS.gene036797:CDS
TAGGTCCAAAACTGGTGGCT+GGG 0.557758 8.1:-12438453 MS.gene036797:CDS
GGAATGAAAACAATGAGCAC+TGG 0.557973 8.1:-12434874 MS.gene036797:CDS
CCCAACATTCCTTTCCATGG+TGG 0.558781 8.1:+12435550 None:intergenic
GGTGGCTTGTTCAACTGAAA+AGG 0.560168 8.1:+12435571 None:intergenic
TTGGACTGTTGGAGATGCTG+TGG 0.560335 8.1:-12438498 MS.gene036797:CDS
TTTGTTGTCGGCATTAGGAA+TGG 0.561964 8.1:-12435073 MS.gene036797:CDS
CAACAAAACTGCCATCCCTA+AGG 0.563133 8.1:-12436407 MS.gene036797:CDS
TCGCTATACCTTATTGCACT+AGG 0.567669 8.1:-12436315 MS.gene036797:CDS
CTCCCTAACAAGGGTAGAAG+AGG 0.568939 8.1:-12435669 MS.gene036797:CDS
GGTAGAAGAGGTGAAAATGA+TGG 0.570599 8.1:-12435657 MS.gene036797:CDS
CTGACCATATAAACAAGGGC+AGG 0.573200 8.1:-12434750 MS.gene036797:CDS
TTAGCACTTCTCTTCAACTG+AGG 0.575499 8.1:+12434600 None:intergenic
ATGGAACTTCCATACAATGT+TGG 0.578930 8.1:-12435967 MS.gene036797:CDS
AAGACTGTAAGAGATCCTGC+AGG 0.581750 8.1:+12435515 None:intergenic
CAGGTTTCTCCAACCTACAA+AGG 0.589609 8.1:-12435110 MS.gene036797:CDS
CAGGGATTGAAATTGTTGAG+AGG 0.595947 8.1:-12437055 MS.gene036797:CDS
TGTTGAGAGGCTCTCCACCA+TGG 0.596962 8.1:-12437042 MS.gene036797:CDS
TTAGGGAGCATAGCTTCCAA+GGG 0.598967 8.1:+12435684 None:intergenic
CCATTCAATTTCTTCCAAAG+GGG 0.601053 8.1:+12435440 None:intergenic
AACAAGCCACCACCATGGAA+AGG 0.602040 8.1:-12435559 MS.gene036797:CDS
CTAAGCCATCTATGCAAATG+GGG 0.607318 8.1:-12434636 MS.gene036797:CDS
GGTCCAAAATATAATGGTTG+TGG 0.607933 8.1:+12435613 None:intergenic
CATTGACAGCAAGAGTGAGT+AGG 0.608376 8.1:+12435477 None:intergenic
TTCATAACACAATCACCGAA+AGG 0.608445 8.1:-12434895 MS.gene036797:CDS
CAAGTTGACTGCAATCCCCA+TGG 0.613410 8.1:+12437025 None:intergenic
AATACTGTGACTGACTTCAT+GGG 0.614676 8.1:-12436954 MS.gene036797:CDS
CAGTTGTGAAGAAAGTAACT+GGG 0.617673 8.1:-12434798 MS.gene036797:CDS
TTTGGAGAAAGCAGCAATTG+TGG 0.617695 8.1:-12435750 MS.gene036797:CDS
TGCCGACAACAAAAGTCCAA+TGG 0.629270 8.1:+12435083 None:intergenic
GAAAACCTCCAAGCAAACAA+AGG 0.632586 8.1:+12436919 None:intergenic
AACTTGGTGACATATCTGAT+GGG 0.635436 8.1:-12437008 MS.gene036797:CDS
CTTATTGCACTAGGAACTGG+TGG 0.635798 8.1:-12436306 MS.gene036797:CDS
AACTGCTGACAAAGAAACCG+AGG 0.639644 8.1:+12434830 None:intergenic
GGTGAAGCATTCATATACAC+AGG 0.650432 8.1:-12434931 MS.gene036797:CDS
GGTGATCATCTGTGCATATG+TGG 0.650446 8.1:+12435592 None:intergenic
CTTTCACCGGCATGGCAAGG+TGG 0.650465 8.1:+12436381 None:intergenic
GTTAGCTGACCATATAAACA+AGG 0.653849 8.1:-12434755 MS.gene036797:CDS
TTTGTATGATGACACTCCAG+AGG 0.663856 8.1:-12435941 MS.gene036797:CDS
TAAGCCATCTATGCAAATGG+GGG 0.669220 8.1:-12434635 MS.gene036797:CDS
AGTTGAACAAGCCACCACCA+TGG 0.672684 8.1:-12435564 MS.gene036797:CDS
GCTGATAGGTCCAAAACTGG+TGG 0.679277 8.1:-12438458 MS.gene036797:CDS
GGACTAGAGATGGACAAGGA+TGG 0.681786 8.1:-12434777 MS.gene036797:CDS
AGACTGTAAGAGATCCTGCA+GGG 0.682708 8.1:+12435516 None:intergenic
TTGAGAGGCTCTCCACCATG+GGG 0.683006 8.1:-12437040 MS.gene036797:CDS
GTTGACTGCAATCCCCATGG+TGG 0.689807 8.1:+12437028 None:intergenic
GAAGCTATGCTCCCTAACAA+GGG 0.690138 8.1:-12435678 MS.gene036797:CDS
TGAAGTGAAACGGTTGTCAG+TGG 0.692757 8.1:-12435034 MS.gene036797:CDS
ACTGCTGACAAAGAAACCGA+GGG 0.712734 8.1:+12434831 None:intergenic
TTAGCTGACCATATAAACAA+GGG 0.737538 8.1:-12434754 MS.gene036797:CDS
ACTGGGACTAGAGATGGACA+AGG 0.764137 8.1:-12434781 MS.gene036797:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAACAAAAACATTATTAT+TGG + chr8.1:12435177-12435196 None:intergenic 10.0%
!! TCTAAACTTAAAATAATAAA+TGG + chr8.1:12436655-12436674 None:intergenic 10.0%
!! TTATATTCTAATATTATCAA+CGG - chr8.1:12437865-12437884 MS.gene036797:intron 10.0%
!!! AATAATAATGTTTTTGTTTA+TGG - chr8.1:12435176-12435195 MS.gene036797:intron 10.0%
!!! TAAAAATTTAGTTTTACTTT+AGG - chr8.1:12435498-12435517 MS.gene036797:CDS 10.0%
!! GAATATTAATCTATTGAAAA+AGG + chr8.1:12435562-12435581 None:intergenic 15.0%
!! TAAAAAAATAGTGATGATTA+AGG + chr8.1:12435455-12435474 None:intergenic 15.0%
!! TAAAATTGATCTCTTATATT+AGG + chr8.1:12436042-12436061 None:intergenic 15.0%
!! TCACTATATTAAATTTAACT+TGG - chr8.1:12436734-12436753 MS.gene036797:intron 15.0%
!! TTACTAATAATAGATAACAT+GGG - chr8.1:12435230-12435249 MS.gene036797:intron 15.0%
!! TTTACTAATAATAGATAACA+TGG - chr8.1:12435229-12435248 MS.gene036797:intron 15.0%
!! TTTCGTGAATTTAATAAAAT+AGG - chr8.1:12436004-12436023 MS.gene036797:CDS 15.0%
!!! AAAACTAAATTTTTAGAAAG+TGG + chr8.1:12435493-12435512 None:intergenic 15.0%
!!! AACAAGTTCAATTTTTTAAA+AGG + chr8.1:12435754-12435773 None:intergenic 15.0%
!!! ACAAGTTCAATTTTTTAAAA+GGG + chr8.1:12435753-12435772 None:intergenic 15.0%
!!! ATTTTTGTCAAATAGTATTT+CGG + chr8.1:12436481-12436500 None:intergenic 15.0%
!!! TATATTAAATTTAACTTGGA+GGG - chr8.1:12436738-12436757 MS.gene036797:intron 15.0%
!!! TATTTTTAATTTCGCAATTT+TGG + chr8.1:12436453-12436472 None:intergenic 15.0%
!!! TTGAATTTTTTACAGTTTTT+TGG - chr8.1:12437436-12437455 MS.gene036797:intron 15.0%
!!! TTTTAAAAAATTGAACTTGT+TGG - chr8.1:12435753-12435772 MS.gene036797:CDS 15.0%
!! AAGTTTAGATACTAAATTGA+TGG - chr8.1:12436666-12436685 MS.gene036797:intron 20.0%
!! ATATAGTAAGATATTTGTGT+TGG + chr8.1:12435610-12435629 None:intergenic 20.0%
!! ATGCCATTATATTATTAACA+CGG + chr8.1:12435699-12435718 None:intergenic 20.0%
!! TATTTGACAAAAATAAGTCA+GGG - chr8.1:12436487-12436506 MS.gene036797:intron 20.0%
!! TGAAAAAAAACGAATATTGA+AGG + chr8.1:12435780-12435799 None:intergenic 20.0%
!! TTACATATTGTCAAAGTATA+AGG + chr8.1:12436587-12436606 None:intergenic 20.0%
!! TTATCCTTAGAATCAATATT+TGG + chr8.1:12435849-12435868 None:intergenic 20.0%
!!! AAATTTAGTTTTACTTTAGG+TGG - chr8.1:12435501-12435520 MS.gene036797:CDS 20.0%
!!! AATTTTATCTTCTTAAGAAG+AGG - chr8.1:12436055-12436074 MS.gene036797:CDS 20.0%
!!! CTATATTAAATTTAACTTGG+AGG - chr8.1:12436737-12436756 MS.gene036797:intron 20.0%
!!! GTCTAAAGTCATTATTTATA+GGG - chr8.1:12435906-12435925 MS.gene036797:intron 20.0%
!!! TAATTTTGAGGTTTAAATCT+TGG - chr8.1:12438001-12438020 MS.gene036797:intron 20.0%
!!! TCTCAATATTTATTGCATTT+TGG - chr8.1:12437907-12437926 MS.gene036797:intron 20.0%
!!! TTTTTTTTTTTCTCAGAAGA+AGG - chr8.1:12435812-12435831 MS.gene036797:intron 20.0%
! AAACTCTTTATAGTTCATGA+GGG - chr8.1:12434823-12434842 MS.gene036797:CDS 25.0%
! AAATCTAGTATTTCAGGATT+TGG - chr8.1:12436925-12436944 MS.gene036797:CDS 25.0%
! AAGAAATTGAATGGAAAAAC+AGG - chr8.1:12437773-12437792 MS.gene036797:intron 25.0%
! ATATGTATGACAAATGTTAG+TGG - chr8.1:12437971-12437990 MS.gene036797:intron 25.0%
! ATATGTGGTCCAAAATATAA+TGG + chr8.1:12437600-12437619 None:intergenic 25.0%
! ATCCCGTGTTAATAATATAA+TGG - chr8.1:12435693-12435712 MS.gene036797:CDS 25.0%
! ATCCTGAAATACTAGATTTA+AGG + chr8.1:12436924-12436943 None:intergenic 25.0%
! ATTGAAAAAGGACAAAATGT+AGG + chr8.1:12435550-12435569 None:intergenic 25.0%
! ATTTGACAAAAATAAGTCAG+GGG - chr8.1:12436488-12436507 MS.gene036797:intron 25.0%
! CATACATTGATACTAATGTT+TGG + chr8.1:12436701-12436720 None:intergenic 25.0%
! CTATTTGACAAAAATAAGTC+AGG - chr8.1:12436486-12436505 MS.gene036797:intron 25.0%
! CTTGGAAGATATAAAACAAT+TGG - chr8.1:12436322-12436341 MS.gene036797:CDS 25.0%
! GATGAAATCTTAGAGTATAA+TGG - chr8.1:12436109-12436128 MS.gene036797:CDS 25.0%
! GTAATTGATACTATTTCACA+TGG + chr8.1:12435325-12435344 None:intergenic 25.0%
! TAGTGATGATTAAGGTATAT+TGG + chr8.1:12435447-12435466 None:intergenic 25.0%
! TGCCATTATATTATTAACAC+GGG + chr8.1:12435698-12435717 None:intergenic 25.0%
!! CGTCTAAAGTCATTATTTAT+AGG - chr8.1:12435905-12435924 MS.gene036797:intron 25.0%
!! GAACTTTCCTAAAAAGTTTT+AGG - chr8.1:12435006-12435025 MS.gene036797:CDS 25.0%
!! TTTTATGTCCTCAATATTTC+AGG - chr8.1:12434670-12434689 MS.gene036797:CDS 25.0%
!!! AAAGTTGATGAAACTAAGTA+TGG + chr8.1:12438505-12438524 None:intergenic 25.0%
!!! ACATGTATGATCCATTTTTT+TGG - chr8.1:12434888-12434907 MS.gene036797:CDS 25.0%
!!! CAATTGTTTTATATCTTCCA+AGG + chr8.1:12436324-12436343 None:intergenic 25.0%
!!! GATTTTGACAAGGATTTATA+TGG - chr8.1:12437485-12437504 MS.gene036797:intron 25.0%
!!! TGGAATATGTTCTATTTCTA+TGG - chr8.1:12437098-12437117 MS.gene036797:intron 25.0%
!!! TTTGCCAAATATTGATTCTA+AGG - chr8.1:12435842-12435861 MS.gene036797:intron 25.0%
!!! TTTTGACTGAATTTCAGTTT+TGG + chr8.1:12436515-12436534 None:intergenic 25.0%
AACATCAAAGACTGATAGAT+AGG - chr8.1:12436605-12436624 MS.gene036797:intron 30.0%
AACTCTTTATAGTTCATGAG+GGG - chr8.1:12434824-12434843 MS.gene036797:CDS 30.0%
AAGATGAAGTAAGTAGAAGT+TGG - chr8.1:12437070-12437089 MS.gene036797:intron 30.0%
ACAAACCAAACGAATATTGA+AGG - chr8.1:12435294-12435313 MS.gene036797:intron 30.0%
ACGCCAAAAAATGTGAATTT+CGG + chr8.1:12435888-12435907 None:intergenic 30.0%
ACTAGAAGGAAAACACTAAT+TGG + chr8.1:12438228-12438247 None:intergenic 30.0%
AGATGAAGTAAGTAGAAGTT+GGG - chr8.1:12437071-12437090 MS.gene036797:intron 30.0%
ATACAGATACAAGAAGAGTT+TGG - chr8.1:12437158-12437177 MS.gene036797:intron 30.0%
ATCGATAAAGAAAAGGAAGA+TGG - chr8.1:12437218-12437237 MS.gene036797:intron 30.0%
ATTCTTCTTCTTCATCAGTT+TGG - chr8.1:12437011-12437030 MS.gene036797:CDS 30.0%
ATTTATAGGGCAAGAAACAT+GGG - chr8.1:12435919-12435938 MS.gene036797:CDS 30.0%
ATTTGATGAGAAAGATGAGA+AGG - chr8.1:12436957-12436976 MS.gene036797:CDS 30.0%
CAAACTCTTTATAGTTCATG+AGG - chr8.1:12434822-12434841 MS.gene036797:CDS 30.0%
CAACAATAACTTGGAAAATG+TGG + chr8.1:12437197-12437216 None:intergenic 30.0%
GAGAAAAAAGTGAGTAACAT+CGG + chr8.1:12437891-12437910 None:intergenic 30.0%
GGAAAAGTTCTCCAAAAAAA+TGG + chr8.1:12434902-12434921 None:intergenic 30.0%
GTAAATAGTTATGAGCTTAC+CGG + chr8.1:12437317-12437336 None:intergenic 30.0%
TACAAAGATCCAACATTGTA+TGG + chr8.1:12437249-12437268 None:intergenic 30.0%
TACAGATACAAGAAGAGTTT+GGG - chr8.1:12437159-12437178 MS.gene036797:intron 30.0%
TATAAACTGAGGAACATCAA+AGG + chr8.1:12438044-12438063 None:intergenic 30.0%
TATTTATAGGGCAAGAAACA+TGG - chr8.1:12435918-12435937 MS.gene036797:CDS 30.0%
TCCAACTATATCTAACTGAA+GGG + chr8.1:12437370-12437389 None:intergenic 30.0%
TCCATTCAATTTCTTCCAAA+GGG + chr8.1:12437768-12437787 None:intergenic 30.0%
TCCTGATAGGAATATCAAAA+TGG + chr8.1:12437130-12437149 None:intergenic 30.0%
TGAACTATAAAGAGTTTGAG+TGG + chr8.1:12434820-12434839 None:intergenic 30.0%
TTAGCTGACCATATAAACAA+GGG - chr8.1:12438450-12438469 MS.gene036797:CDS 30.0%
TTATCGATGCAACAATAACT+TGG + chr8.1:12437206-12437225 None:intergenic 30.0%
TTCCATTCAATTTCTTCCAA+AGG + chr8.1:12437769-12437788 None:intergenic 30.0%
TTCTTCTTCTTCATCAGTTT+GGG - chr8.1:12437012-12437031 MS.gene036797:CDS 30.0%
TTTCTTCTCCTGAAATATTG+AGG + chr8.1:12434681-12434700 None:intergenic 30.0%
TTTGTCCTTCAATATTCGTT+TGG + chr8.1:12435302-12435321 None:intergenic 30.0%
! ACTACCTCCTAAAACTTTTT+AGG + chr8.1:12435016-12435035 None:intergenic 30.0%
! CATCAACTTTGTAGCATTTT+TGG - chr8.1:12438515-12438534 MS.gene036797:CDS 30.0%
! CTCATTGTTTTCATTCCTTT+CGG + chr8.1:12438327-12438346 None:intergenic 30.0%
! TAATGGCATATTTGCACTTT+TGG - chr8.1:12435710-12435729 MS.gene036797:CDS 30.0%
! TGTTTTATATCTTCCAAGGA+AGG + chr8.1:12436320-12436339 None:intergenic 30.0%
! TTGTTGCATCGATAAAGAAA+AGG - chr8.1:12437211-12437230 MS.gene036797:intron 30.0%
!! AATTTCTGTCACTTTCTGTT+TGG - chr8.1:12435365-12435384 MS.gene036797:intron 30.0%
!! AGTGGATTCTGTTAATTTTG+AGG - chr8.1:12437989-12438008 MS.gene036797:intron 30.0%
!! TAAATTTAACTTGGAGGGTA+TGG - chr8.1:12436743-12436762 MS.gene036797:intron 30.0%
!!! AAAAAGTTTTAGGAGGTAGT+TGG - chr8.1:12435016-12435035 MS.gene036797:CDS 30.0%
!!! AGACCGAAATTCACATTTTT+TGG - chr8.1:12435882-12435901 MS.gene036797:intron 30.0%
!!! CATTTTTGGTATGTGCATTT+TGG - chr8.1:12438529-12438548 MS.gene036797:intron 30.0%
!!! CTTTCCTAAAAAGTTTTAGG+AGG - chr8.1:12435009-12435028 MS.gene036797:CDS 30.0%
!!! TTGGAGACTTTTTTACAGTT+AGG - chr8.1:12437385-12437404 MS.gene036797:intron 30.0%
AACCAACCAAGAAGAATTGT+GGG + chr8.1:12438251-12438270 None:intergenic 35.0%
AATGCTCTTTGTTGAGAATC+AGG + chr8.1:12435650-12435669 None:intergenic 35.0%
ACAAGTATAAGACTCCCATT+TGG + chr8.1:12436870-12436889 None:intergenic 35.0%
ACTAATCGCTTCGAAATGTT+TGG + chr8.1:12436563-12436582 None:intergenic 35.0%
ACTCTTTATAGTTCATGAGG+GGG - chr8.1:12434825-12434844 MS.gene036797:CDS 35.0%
ACTTGGAAAATGTGGACAAT+AGG + chr8.1:12437189-12437208 None:intergenic 35.0%
ATAGATGGCTTAGGTTTCTT+AGG + chr8.1:12438561-12438580 None:intergenic 35.0%
ATGCTCTTTGTTGAGAATCA+GGG + chr8.1:12435649-12435668 None:intergenic 35.0%
ATGGAACTTCCATACAATGT+TGG - chr8.1:12437237-12437256 MS.gene036797:intron 35.0%
CAGTTGTGAAGAAAGTAACT+GGG - chr8.1:12438406-12438425 MS.gene036797:intron 35.0%
CCATTCAATTTCTTCCAAAG+GGG + chr8.1:12437767-12437786 None:intergenic 35.0%
CTCCAACTATATCTAACTGA+AGG + chr8.1:12437371-12437390 None:intergenic 35.0%
CTTCTCTGATTGAAGTGAAA+CGG - chr8.1:12438160-12438179 MS.gene036797:intron 35.0%
CTTGGAAAATGTGGACAATA+GGG + chr8.1:12437188-12437207 None:intergenic 35.0%
GACAAGGATTTATATGGTTC+TGG - chr8.1:12437491-12437510 MS.gene036797:intron 35.0%
GACTTGTCAAAACTGTTACA+GGG - chr8.1:12436131-12436150 MS.gene036797:CDS 35.0%
GAGACGGTGTAAGTTTATTT+CGG + chr8.1:12436416-12436435 None:intergenic 35.0%
GCTACTAACTAACTGTAACA+AGG - chr8.1:12435060-12435079 MS.gene036797:CDS 35.0%
GGCCTTAAATCTAGTATTTC+AGG - chr8.1:12436919-12436938 MS.gene036797:CDS 35.0%
GGTCCAAAATATAATGGTTG+TGG + chr8.1:12437594-12437613 None:intergenic 35.0%
GGTTAGACTTCTACCAATAT+GGG - chr8.1:12437568-12437587 MS.gene036797:intron 35.0%
GTTAGCTGACCATATAAACA+AGG - chr8.1:12438449-12438468 MS.gene036797:CDS 35.0%
TCAGTTGTGAAGAAAGTAAC+TGG - chr8.1:12438405-12438424 MS.gene036797:intron 35.0%
TCCCTTCAGTTAGATATAGT+TGG - chr8.1:12437366-12437385 MS.gene036797:intron 35.0%
TGGTTAGACTTCTACCAATA+TGG - chr8.1:12437567-12437586 MS.gene036797:intron 35.0%
TGTATCTTGTAGTTCCTGAT+AGG + chr8.1:12437143-12437162 None:intergenic 35.0%
TGTTCTATTCTTGAATCCTC+TGG + chr8.1:12437282-12437301 None:intergenic 35.0%
TTAGAAACACGGTGTGTATT+TGG - chr8.1:12434855-12434874 MS.gene036797:CDS 35.0%
TTCAGGAGAAGAAAATGAGT+TGG - chr8.1:12434687-12434706 MS.gene036797:CDS 35.0%
TTCATAACACAATCACCGAA+AGG - chr8.1:12438309-12438328 MS.gene036797:intron 35.0%
TTCCTAACAACTTTATCCCT+CGG - chr8.1:12438357-12438376 MS.gene036797:intron 35.0%
! AACATGGGTGCAATGATTTT+GGG - chr8.1:12435245-12435264 MS.gene036797:intron 35.0%
! AACTTGGTGACATATCTGAT+GGG - chr8.1:12436196-12436215 MS.gene036797:CDS 35.0%
! AAGAAAATGAGTTGGACTGT+TGG - chr8.1:12434695-12434714 MS.gene036797:CDS 35.0%
! AATACTGTGACTGACTTCAT+GGG - chr8.1:12436250-12436269 MS.gene036797:CDS 35.0%
! CTTTTCTGCAATACAAACAC+TGG - chr8.1:12436348-12436367 MS.gene036797:CDS 35.0%
! TAACATGGGTGCAATGATTT+TGG - chr8.1:12435244-12435263 MS.gene036797:intron 35.0%
! TAATACTGTGACTGACTTCA+TGG - chr8.1:12436249-12436268 MS.gene036797:CDS 35.0%
! TAGTCCTCAATCGAACTTTT+TGG + chr8.1:12435983-12436002 None:intergenic 35.0%
! TCATTTCTCCTTTGTTTGCT+TGG - chr8.1:12436277-12436296 MS.gene036797:CDS 35.0%
!! CACTAATTGGTAGTGTTGTT+TGG + chr8.1:12438215-12438234 None:intergenic 35.0%
!! GCCATTTTGATATTCCTATC+AGG - chr8.1:12437126-12437145 MS.gene036797:intron 35.0%
!! TGAAGGAGGATTTTTAGAGA+AGG + chr8.1:12434923-12434942 None:intergenic 35.0%
!! TGTCACTTTCTGTTTGGATT+GGG - chr8.1:12435371-12435390 MS.gene036797:intron 35.0%
AAACCTAAAATGAGAGCAGC+TGG + chr8.1:12434779-12434798 None:intergenic 40.0%
AAAGCAGCAATTGTGGTAGA+AGG - chr8.1:12437461-12437480 MS.gene036797:intron 40.0%
AAAGTAACTGGGACTAGAGA+TGG - chr8.1:12438417-12438436 MS.gene036797:intron 40.0%
AACCGAGGGATAAAGTTGTT+AGG + chr8.1:12438362-12438381 None:intergenic 40.0%
ACCTAAGCCATCTATGCAAA+TGG - chr8.1:12438566-12438585 MS.gene036797:intron 40.0%
ACCTGCGATACATAGAAAAC+AGG + chr8.1:12438079-12438098 None:intergenic 40.0%
ACGGTGTAAGTTTATTTCGG+TGG + chr8.1:12436413-12436432 None:intergenic 40.0%
AGAAGAATTGTGGGACTAGA+AGG + chr8.1:12438242-12438261 None:intergenic 40.0%
ATAATGGTTGTGGCCCATAT+TGG + chr8.1:12437584-12437603 None:intergenic 40.0%
ATTCCCAACATTCCTTTCCA+TGG + chr8.1:12437660-12437679 None:intergenic 40.0%
CAGGGATTGAAATTGTTGAG+AGG - chr8.1:12436149-12436168 MS.gene036797:CDS 40.0%
CCTAAGCCATCTATGCAAAT+GGG - chr8.1:12438567-12438586 MS.gene036797:intron 40.0%
CTAAGCCATCTATGCAAATG+GGG - chr8.1:12438568-12438587 MS.gene036797:intron 40.0%
CTGAGACATAGACATAGACA+AGG - chr8.1:12434956-12434975 MS.gene036797:CDS 40.0%
CTTGTCTATGTCTATGTCTC+AGG + chr8.1:12434958-12434977 None:intergenic 40.0%
CTTTCTTCACAACTGACACA+AGG + chr8.1:12438401-12438420 None:intergenic 40.0%
GAAAACCTCCAAGCAAACAA+AGG + chr8.1:12436288-12436307 None:intergenic 40.0%
GAACCAACCAAGAAGAATTG+TGG + chr8.1:12438252-12438271 None:intergenic 40.0%
GACACCAAAAAGTTCGATTG+AGG - chr8.1:12435976-12435995 MS.gene036797:CDS 40.0%
GGAATGAAAACAATGAGCAC+TGG - chr8.1:12438330-12438349 MS.gene036797:intron 40.0%
GGACTTGTCAAAACTGTTAC+AGG - chr8.1:12436130-12436149 MS.gene036797:CDS 40.0%
GGGGTGTAGAATTAGAAACA+CGG - chr8.1:12434844-12434863 MS.gene036797:CDS 40.0%
GGTAGAAGAGGTGAAAATGA+TGG - chr8.1:12437547-12437566 MS.gene036797:intron 40.0%
GTAAGTAGAAGTTGGGCTTA+TGG - chr8.1:12437078-12437097 MS.gene036797:intron 40.0%
TAAGCCATCTATGCAAATGG+GGG - chr8.1:12438569-12438588 MS.gene036797:intron 40.0%
TACCTTATTGCACTAGGAAC+TGG - chr8.1:12436895-12436914 MS.gene036797:CDS 40.0%
TAGAACACACTGAACAGTTC+CGG - chr8.1:12437295-12437314 MS.gene036797:intron 40.0%
TCGCTATACCTTATTGCACT+AGG - chr8.1:12436889-12436908 MS.gene036797:CDS 40.0%
TCTAGTCCCACAATTCTTCT+TGG - chr8.1:12438242-12438261 MS.gene036797:intron 40.0%
TTAGCACTTCTCTTCAACTG+AGG + chr8.1:12438607-12438626 None:intergenic 40.0%
TTTGGAGAAAGCAGCAATTG+TGG - chr8.1:12437454-12437473 MS.gene036797:intron 40.0%
TTTGTATGATGACACTCCAG+AGG - chr8.1:12437263-12437282 MS.gene036797:intron 40.0%
! ACATGGGTGCAATGATTTTG+GGG - chr8.1:12435246-12435265 MS.gene036797:intron 40.0%
! ACTTTAGGTGGCTTTTAGCA+TGG - chr8.1:12435513-12435532 MS.gene036797:CDS 40.0%
! AGGTCAGTTGGTATAAACTG+AGG + chr8.1:12438055-12438074 None:intergenic 40.0%
! CAACTTGGTGACATATCTGA+TGG - chr8.1:12436195-12436214 MS.gene036797:CDS 40.0%
! CAATTCTTCTTGGTTGGTTC+TGG - chr8.1:12438252-12438271 MS.gene036797:intron 40.0%
! CCCCTTTGGAAGAAATTGAA+TGG - chr8.1:12437764-12437783 MS.gene036797:intron 40.0%
! GGGCCACAACCATTATATTT+TGG - chr8.1:12437588-12437607 MS.gene036797:intron 40.0%
! GGTGAAGCATTCATATACAC+AGG - chr8.1:12438273-12438292 MS.gene036797:intron 40.0%
! GTCACTTTCTGTTTGGATTG+GGG - chr8.1:12435372-12435391 MS.gene036797:intron 40.0%
! TCACTTTCTGTTTGGATTGG+GGG - chr8.1:12435373-12435392 MS.gene036797:intron 40.0%
! TTTCTAGCAGATTCCTTCCT+TGG - chr8.1:12436304-12436323 MS.gene036797:CDS 40.0%
! TTTCTCCTTTGTTTGCTTGG+AGG - chr8.1:12436280-12436299 MS.gene036797:CDS 40.0%
! TTTGTTGTCGGCATTAGGAA+TGG - chr8.1:12438131-12438150 MS.gene036797:intron 40.0%
!! CTGTCACTTTCTGTTTGGAT+TGG - chr8.1:12435370-12435389 MS.gene036797:intron 40.0%
!! GGTAGAAGGTGATTTTGACA+AGG - chr8.1:12437475-12437494 MS.gene036797:intron 40.0%
!! TCAAAGGAGTACTAACTAGC+AGG + chr8.1:12438028-12438047 None:intergenic 40.0%
!! TCAGTTGAAGAGAAGTGCTA+AGG - chr8.1:12438606-12438625 MS.gene036797:intron 40.0%
AAACGGTTGTCAGTGGCAAA+AGG - chr8.1:12438177-12438196 MS.gene036797:intron 45.0%
AACATTCCTTTCCATGGTGG+TGG + chr8.1:12437654-12437673 None:intergenic 45.0%
AACCTACAAAGGATCGCCAT+TGG - chr8.1:12438105-12438124 MS.gene036797:intron 45.0%
AACTGCTGACAAAGAAACCG+AGG + chr8.1:12438377-12438396 None:intergenic 45.0%
AAGACTGTAAGAGATCCTGC+AGG + chr8.1:12437692-12437711 None:intergenic 45.0%
AATGGCGATCCTTTGTAGGT+TGG + chr8.1:12438106-12438125 None:intergenic 45.0%
ACCACCATGGAAAGGAATGT+TGG - chr8.1:12437653-12437672 MS.gene036797:intron 45.0%
ACTGCTGACAAAGAAACCGA+GGG + chr8.1:12438376-12438395 None:intergenic 45.0%
AGACTGTAAGAGATCCTGCA+GGG + chr8.1:12437691-12437710 None:intergenic 45.0%
ATAGGGCAAGAAACATGGGT+TGG - chr8.1:12435923-12435942 MS.gene036797:CDS 45.0%
ATTGCCCCCATTTGCATAGA+TGG + chr8.1:12438576-12438595 None:intergenic 45.0%
CAACAAAACTGCCATCCCTA+AGG - chr8.1:12436797-12436816 MS.gene036797:intron 45.0%
CACCAGTTCCTAGTGCAATA+AGG + chr8.1:12436900-12436919 None:intergenic 45.0%
CACCTCTTCTACCCTTGTTA+GGG + chr8.1:12437540-12437559 None:intergenic 45.0%
CAGGTTTCTCCAACCTACAA+AGG - chr8.1:12438094-12438113 MS.gene036797:intron 45.0%
CATTGACAGCAAGAGTGAGT+AGG + chr8.1:12437730-12437749 None:intergenic 45.0%
CCACCATGGAAAGGAATGTT+GGG - chr8.1:12437654-12437673 MS.gene036797:intron 45.0%
CCAGCGAATGGAATCCAAAT+GGG - chr8.1:12436853-12436872 MS.gene036797:intron 45.0%
CCCATTTGCATAGATGGCTT+AGG + chr8.1:12438570-12438589 None:intergenic 45.0%
CTGACCATATAAACAAGGGC+AGG - chr8.1:12438454-12438473 MS.gene036797:CDS 45.0%
CTTATTGCACTAGGAACTGG+TGG - chr8.1:12436898-12436917 MS.gene036797:CDS 45.0%
GAAGCTATGCTCCCTAACAA+GGG - chr8.1:12437526-12437545 MS.gene036797:intron 45.0%
GCGATACATAGAAAACAGGC+AGG + chr8.1:12438075-12438094 None:intergenic 45.0%
GGTGATCATCTGTGCATATG+TGG + chr8.1:12437615-12437634 None:intergenic 45.0%
GTATTAGCTGCAGTTGAGCT+TGG + chr8.1:12436235-12436254 None:intergenic 45.0%
GTCCCACAATTCTTCTTGGT+TGG - chr8.1:12438246-12438265 MS.gene036797:intron 45.0%
TACACCGTCTCTCCTACTTA+GGG - chr8.1:12436425-12436444 MS.gene036797:CDS 45.0%
TAGAAAACAGGCAGGTCAGT+TGG + chr8.1:12438067-12438086 None:intergenic 45.0%
TAGGGCAAGAAACATGGGTT+GGG - chr8.1:12435924-12435943 MS.gene036797:CDS 45.0%
TCACCTCTTCTACCCTTGTT+AGG + chr8.1:12437541-12437560 None:intergenic 45.0%
TCAGGCTACTGTTGCAATGA+AGG + chr8.1:12434940-12434959 None:intergenic 45.0%
TGAAGTGAAACGGTTGTCAG+TGG - chr8.1:12438170-12438189 MS.gene036797:intron 45.0%
TGCCGACAACAAAAGTCCAA+TGG + chr8.1:12438124-12438143 None:intergenic 45.0%
TTACACCGTCTCTCCTACTT+AGG - chr8.1:12436424-12436443 MS.gene036797:CDS 45.0%
! ACACGGTGTGTATTTGGTGA+TGG - chr8.1:12434861-12434880 MS.gene036797:CDS 45.0%
! CAAGCCTGCCCTTGTTTATA+TGG + chr8.1:12438461-12438480 None:intergenic 45.0%
! CACTTTCTGTTTGGATTGGG+GGG - chr8.1:12435374-12435393 MS.gene036797:intron 45.0%
! CATGGGTGCAATGATTTTGG+GGG - chr8.1:12435247-12435266 MS.gene036797:intron 45.0%
! GCCTGTTTTCTATGTATCGC+AGG - chr8.1:12438075-12438094 MS.gene036797:intron 45.0%
! GGAGATGCTGTGGACTATAA+AGG - chr8.1:12434716-12434735 MS.gene036797:CDS 45.0%
! GGGAATTTTCAAATCCCTGC+AGG - chr8.1:12437674-12437693 MS.gene036797:intron 45.0%
! GTTCCAGCTGCTCTCATTTT+AGG - chr8.1:12434773-12434792 MS.gene036797:CDS 45.0%
! TCAGTGGCAAAAGGCGTAAA+AGG - chr8.1:12438186-12438205 MS.gene036797:intron 45.0%
! TCCAAAGGGGCATGATGATT+CGG + chr8.1:12437754-12437773 None:intergenic 45.0%
! TGGAGGGTATGGTGATTTCA+GGG - chr8.1:12436754-12436773 MS.gene036797:intron 45.0%
! TTAGGGAGCATAGCTTCCAA+GGG + chr8.1:12437523-12437542 None:intergenic 45.0%
! TTGGAGGGTATGGTGATTTC+AGG - chr8.1:12436753-12436772 MS.gene036797:intron 45.0%
!! CGCCATTGGACTTTTGTTGT+CGG - chr8.1:12438119-12438138 MS.gene036797:intron 45.0%
!! GCAATTTTGGTCCCCTAAGT+AGG + chr8.1:12436440-12436459 None:intergenic 45.0%
!! GGACTTTTGTTGTCGGCATT+AGG - chr8.1:12438126-12438145 MS.gene036797:intron 45.0%
!! GGTGGCTTGTTCAACTGAAA+AGG + chr8.1:12437636-12437655 None:intergenic 45.0%
!!! AGTTTTGGACCTATCAGCAG+GGG + chr8.1:12434744-12434763 None:intergenic 45.0%
!!! CAGTTTTGGACCTATCAGCA+GGG + chr8.1:12434745-12434764 None:intergenic 45.0%
AACAAGCCACCACCATGGAA+AGG - chr8.1:12437645-12437664 MS.gene036797:intron 50.0%
ACACCGTCTCTCCTACTTAG+GGG - chr8.1:12436426-12436445 MS.gene036797:CDS 50.0%
ACCGAATCATCATGCCCCTT+TGG - chr8.1:12437750-12437769 MS.gene036797:intron 50.0%
ACTGGGACTAGAGATGGACA+AGG - chr8.1:12438423-12438442 MS.gene036797:intron 50.0%
AGTTGAACAAGCCACCACCA+TGG - chr8.1:12437640-12437659 MS.gene036797:intron 50.0%
ATAAAGGCTCCCCTGCTGAT+AGG - chr8.1:12434732-12434751 MS.gene036797:CDS 50.0%
ATAGGTCCAAAACTGGTGGC+TGG - chr8.1:12434750-12434769 MS.gene036797:CDS 50.0%
CATGGGGATTGCAGTCAACT+TGG - chr8.1:12436180-12436199 MS.gene036797:CDS 50.0%
CCCAACATTCCTTTCCATGG+TGG + chr8.1:12437657-12437676 None:intergenic 50.0%
CCCATTTGGATTCCATTCGC+TGG + chr8.1:12436856-12436875 None:intergenic 50.0%
CCTGCTGATAGGTCCAAAAC+TGG - chr8.1:12434743-12434762 MS.gene036797:CDS 50.0%
CTCCCTAACAAGGGTAGAAG+AGG - chr8.1:12437535-12437554 MS.gene036797:intron 50.0%
GAAAGTTGCAAGCCAGCGAA+TGG - chr8.1:12436841-12436860 MS.gene036797:intron 50.0%
GAGCATAGCTTCCAAGGGTT+TGG + chr8.1:12437518-12437537 None:intergenic 50.0%
GCCAGCGAATGGAATCCAAA+TGG - chr8.1:12436852-12436871 MS.gene036797:intron 50.0%
GCTGATAGGTCCAAAACTGG+TGG - chr8.1:12434746-12434765 MS.gene036797:CDS 50.0%
GGAAGCTATGCTCCCTAACA+AGG - chr8.1:12437525-12437544 MS.gene036797:intron 50.0%
GGACTAGAGATGGACAAGGA+TGG - chr8.1:12438427-12438446 MS.gene036797:intron 50.0%
GGCTACTGTTGCAATGAAGG+AGG + chr8.1:12434937-12434956 None:intergenic 50.0%
GGGGGTTATGATTGCATCTG+AGG - chr8.1:12435265-12435284 MS.gene036797:intron 50.0%
GTCCAATGGCGATCCTTTGT+AGG + chr8.1:12438110-12438129 None:intergenic 50.0%
TAGGTCCAAAACTGGTGGCT+GGG - chr8.1:12434751-12434770 MS.gene036797:CDS 50.0%
TTGGACTGTTGGAGATGCTG+TGG - chr8.1:12434706-12434725 MS.gene036797:CDS 50.0%
! CAAGTTGACTGCAATCCCCA+TGG + chr8.1:12436182-12436201 None:intergenic 50.0%
! GTTAGGGAGCATAGCTTCCA+AGG + chr8.1:12437524-12437543 None:intergenic 50.0%
!! ATGGTTCTGGTCCAAACCCT+TGG - chr8.1:12437504-12437523 MS.gene036797:intron 50.0%
!!! CCAGTTTTGGACCTATCAGC+AGG + chr8.1:12434746-12434765 None:intergenic 50.0%
CAACTTTCACCGGCATGGCA+AGG + chr8.1:12436829-12436848 None:intergenic 55.0%
GCTTGCAACTTTCACCGGCA+TGG + chr8.1:12436834-12436853 None:intergenic 55.0%
GGTCCCCTAAGTAGGAGAGA+CGG + chr8.1:12436432-12436451 None:intergenic 55.0%
GTTGACTGCAATCCCCATGG+TGG + chr8.1:12436179-12436198 None:intergenic 55.0%
GTTGAGAGGCTCTCCACCAT+GGG - chr8.1:12436163-12436182 MS.gene036797:CDS 55.0%
TGTTGAGAGGCTCTCCACCA+TGG - chr8.1:12436162-12436181 MS.gene036797:CDS 55.0%
TTGAGAGGCTCTCCACCATG+GGG - chr8.1:12436164-12436183 MS.gene036797:CDS 55.0%
! ATGGCAAGGTGGTGGCCTTA+GGG + chr8.1:12436815-12436834 None:intergenic 55.0%
! TGGAACCCAGCCACCAGTTT+TGG + chr8.1:12434759-12434778 None:intergenic 55.0%
!! CGCTGGCTTGCAACTTTCAC+CGG + chr8.1:12436839-12436858 None:intergenic 55.0%
CTTTCACCGGCATGGCAAGG+TGG + chr8.1:12436826-12436845 None:intergenic 60.0%
! CAAGGTGGTGGCCTTAGGGA+TGG + chr8.1:12436811-12436830 None:intergenic 60.0%
! CATGGCAAGGTGGTGGCCTT+AGG + chr8.1:12436816-12436835 None:intergenic 60.0%
AGGCCACCACCTTGCCATGC+CGG - chr8.1:12436817-12436836 MS.gene036797:intron 65.0%
TCACCGGCATGGCAAGGTGG+TGG + chr8.1:12436823-12436842 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 12434600 12438626 12434600 ID=MS.gene036797
chr8.1 mRNA 12434600 12438626 12434600 ID=MS.gene036797.t1;Parent=MS.gene036797
chr8.1 exon 12438624 12438626 12438624 ID=MS.gene036797.t1.exon1;Parent=MS.gene036797.t1
chr8.1 CDS 12438624 12438626 12438624 ID=cds.MS.gene036797.t1;Parent=MS.gene036797.t1
chr8.1 exon 12438432 12438534 12438432 ID=MS.gene036797.t1.exon2;Parent=MS.gene036797.t1
chr8.1 CDS 12438432 12438534 12438432 ID=cds.MS.gene036797.t1;Parent=MS.gene036797.t1
chr8.1 exon 12436857 12437074 12436857 ID=MS.gene036797.t1.exon3;Parent=MS.gene036797.t1
chr8.1 CDS 12436857 12437074 12436857 ID=cds.MS.gene036797.t1;Parent=MS.gene036797.t1
chr8.1 exon 12435910 12436451 12435910 ID=MS.gene036797.t1.exon4;Parent=MS.gene036797.t1
chr8.1 CDS 12435910 12436451 12435910 ID=cds.MS.gene036797.t1;Parent=MS.gene036797.t1
chr8.1 exon 12435432 12435775 12435432 ID=MS.gene036797.t1.exon5;Parent=MS.gene036797.t1
chr8.1 CDS 12435432 12435775 12435432 ID=cds.MS.gene036797.t1;Parent=MS.gene036797.t1
chr8.1 exon 12434600 12435129 12434600 ID=MS.gene036797.t1.exon6;Parent=MS.gene036797.t1
chr8.1 CDS 12434600 12435129 12434600 ID=cds.MS.gene036797.t1;Parent=MS.gene036797.t1
Gene Sequence

>MS.gene036797

ATGGTTAGTTTTTGGTCAATGGAAGCTTTAACAAACTTATGAGATTTTCTCTTTTTTTTATATAAAAATATTTTATGTCCTCAATATTTCAGGAGAAGAAAATGAGTTGGACTGTTGGAGATGCTGTGGACTATAAAGGCTCCCCTGCTGATAGGTCCAAAACTGGTGGCTGGGTTCCAGCTGCTCTCATTTTAGGTTTGTTACACTTCTAGCATAACCACTCAAACTCTTTATAGTTCATGAGGGGGTGTAGAATTAGAAACACGGTGTGTATTTGGTGATGGTGTTACATGTATGATCCATTTTTTTGGAGAACTTTTCCTTCTCTAAAAATCCTCCTTCATTGCAACAGTAGCCTGAGACATAGACATAGACAAGGCTTGACTTTAATACACATGATTATCATGAACTTTCCTAAAAAGTTTTAGGAGGTAGTTGGATCTCATAAATGATTTTAATTGCTACTAACTAACTGTAACAAGGTTTTAGTACATGTGTTACATTTATATAATTTTGATTTCTCTTAAACTGTTTATGACTTTACAACATCAGAAAATTACAATTATTTTTTGATCCAATAATAATGTTTTTGTTTATGGACAGTAATTTTGTTATCATATGTAAATTATTTTACTAATAATAGATAACATGGGTGCAATGATTTTGGGGGTTATGATTGCATCTGAGGAAGAAGACAAACCAAACGAATATTGAAGGACAAACCATGTGAAATAGTATCAATTACAGTCTTATAGCACATGAAACAATTTCTGTCACTTTCTGTTTGGATTGGGGGGAAAGAGCATAATATTATATTTAAGCTTTTTAGATGTGAATTAAGATACCAATATACCTTAATCATCACTATTTTTTTATCTTATCTTATTGTTCCACTTTCTAAAAATTTAGTTTTACTTTAGGTGGCTTTTAGCATGGACTACTTTGTTCCTACATTTTGTCCTTTTTCAATAGATTAATATTCACTTTTTACTTACAATATCTGCTTACCAACACAAATATCTTACTATATTGCACTGAGCTAATCACCCTGATTCTCAACAAAGAGCATTAAAACTGAAAAGCTTAAGAAAATATCCCGTGTTAATAATATAATGGCATATTTGCACTTTTGGTTGCTAAAAAGAATAGTCCCTTTTAAAAAATTGAACTTGTTGGTCCTTCAATATTCGTTTTTTTTCACTTGTTAGTCTATTTTTTTTTTTCTCAGAAGAAGGTGATATATTTGCCAAATATTGATTCTAAGGATAAAATATCACTTTTGAGACCGAAATTCACATTTTTTGGCGTCTAAAGTCATTATTTATAGGGCAAGAAACATGGGTTGGGACTAAAATTGCAATAAATGTAAAAATAAAGACACCAAAAAGTTCGATTGAGGACTATTTTCGTGAATTTAATAAAATAGGAGAATCAATAAGCCTAATATAAGAGATCAATTTTATCTTCTTAAGAAGAGGTTGTTAGAATAAATAAAAAGTTACTGTGAATGATGAAATCTTAGAGTATAATGGACTTGTCAAAACTGTTACAGGGATTGAAATTGTTGAGAGGCTCTCCACCATGGGGATTGCAGTCAACTTGGTGACATATCTGATGGGAGTCATGCATCTGCCAAGCTCAACTGCAGCTAATACTGTGACTGACTTCATGGGCACATCATTTCTCCTTTGTTTGCTTGGAGGTTTTCTAGCAGATTCCTTCCTTGGAAGATATAAAACAATTGGAATCTTTTCTGCAATACAAACACTGGTTAGTTACATTACTACTAGTTCTAAGCTTCATTTATATTCCACCGAAATAAACTTACACCGTCTCTCCTACTTAGGGGACCAAAATTGCGAAATTAAAAATATGAGACCGAAATACTATTTGACAAAAATAAGTCAGGGGACCAAAACTGAAATTCAGTCAAAACAATAAATAGTTTCTACTATTTGTTCCAAACATTTCGAAGCGATTAGTTCCTTATACTTTGACAATATGTAACATCAAAGACTGATAGATAGGACACATGTGACAAAATGTACGAGACCATTTATTATTTTAAGTTTAGATACTAAATTGATGGTTACTCGAACCAAACATTAGTATCAATGTATGTGTTATTAGTTTCTCACTATATTAAATTTAACTTGGAGGGTATGGTGATTTCAGGGTACTGCAGCATTAGCAATCTCAACAAAACTGCCATCCCTAAGGCCACCACCTTGCCATGCCGGTGAAAGTTGCAAGCCAGCGAATGGAATCCAAATGGGAGTCTTATACTTGTCGCTATACCTTATTGCACTAGGAACTGGTGGCCTTAAATCTAGTATTTCAGGATTTGGTTCTGATCAATTTGATGAGAAAGATGAGAAGGAGAAATCACAAATGACTTTTTTCTTCAATAGATTCTTCTTCTTCATCAGTTTGGGAACTCTTGCAGCTGTCACAATACTTGTTTACATACAAGATGAAGTAAGTAGAAGTTGGGCTTATGGAATATGTTCTATTTCTATGGTCATAGCCATTTTGATATTCCTATCAGGAACTACAAGATACAGATACAAGAAGAGTTTGGGAAGCCCTATTGTCCACATTTTCCAAGTTATTGTTGCATCGATAAAGAAAAGGAAGATGGAACTTCCATACAATGTTGGATCTTTGTATGATGACACTCCAGAGGATTCAAGAATAGAACACACTGAACAGTTCCGGTAAGCTCATAACTATTTACACTATCACGATTCACTGCATATCAATTACTCCCTTCAGTTAGATATAGTTGGAGACTTTTTTACAGTTAGGATCACTCTTCTTTTCTGTTTCTAATACTTTGAATTTTTTACAGTTTTTTGGAGAAAGCAGCAATTGTGGTAGAAGGTGATTTTGACAAGGATTTATATGGTTCTGGTCCAAACCCTTGGAAGCTATGCTCCCTAACAAGGGTAGAAGAGGTGAAAATGATGGTTAGACTTCTACCAATATGGGCCACAACCATTATATTTTGGACCACATATGCACAGATGATCACCTTTTCAGTTGAACAAGCCACCACCATGGAAAGGAATGTTGGGAATTTTCAAATCCCTGCAGGATCTCTTACAGTCTTCTTTGTCATCGCAATCCTACTCACTCTTGCTGTCAATGACCGAATCATCATGCCCCTTTGGAAGAAATTGAATGGAAAAACAGGTTTAAAACTACTCGATCTGTTATGCATATAACATCAACTATTAATTTAATAATTTATACAATGAATATTTTATATTCTAATATTATCAACGGCCGATGTTACTCACTTTTTTCTCAATATTTATTGCATTTTGGCTTTTTGAAAAAATAAAAACTAACATATTACATATATATGTATATGTATGACAAATGTTAGTGGATTCTGTTAATTTTGAGGTTTAAATCTTGGACCTGCTAGTTAGTACTCCTTTGATGTTCCTCAGTTTATACCAACTGACCTGCCTGTTTTCTATGTATCGCAGGTTTCTCCAACCTACAAAGGATCGCCATTGGACTTTTGTTGTCGGCATTAGGAATGGCAGCTGCTTCTCTGATTGAAGTGAAACGGTTGTCAGTGGCAAAAGGCGTAAAAGGCAACCAAACAACACTACCAATTAGTGTTTTCCTTCTAGTCCCACAATTCTTCTTGGTTGGTTCTGGTGAAGCATTCATATACACAGGACAACTTGATTTCTTCATAACACAATCACCGAAAGGAATGAAAACAATGAGCACTGGTCTCTTCCTAACAACTTTATCCCTCGGTTTCTTTGTCAGCAGTTTCCTTGTGTCAGTTGTGAAGAAAGTAACTGGGACTAGAGATGGACAAGGATGGTTAGCTGACCATATAAACAAGGGCAGGCTTGACTTGTTCTATGCACTTCTTACCATACTTAGTTTCATCAACTTTGTAGCATTTTTGGTATGTGCATTTTGGTATAAGCCTAAGAAACCTAAGCCATCTATGCAAATGGGGGCAATCAATGGATCCTCAGTTGAAGAGAAGTGCTAA
Protein sequence

>MS.gene036797.t1

MEKKMSWTVGDAVDYKGSPADRSKTGGWVPAALILGIEIVERLSTMGIAVNLVTYLMGVMHLPSSTAANTVTDFMGTSFLLCLLGGFLADSFLGRYKTIGIFSAIQTLGTAALAISTKLPSLRPPPCHAGESCKPANGIQMGVLYLSLYLIALGTGGLKSSISGFGSDQFDEKDEKEKSQMTFFFNRFFFFISLGTLAAVTILVYIQDEVSRSWAYGICSISMVIAILIFLSGTTRYRYKKSLGSPIVHIFQVIVASIKKRKMELPYNVGSLYDDTPEDSRIEHTEQFRFLEKAAIVVEGDFDKDLYGSGPNPWKLCSLTRVEEVKMMVRLLPIWATTIIFWTTYAQMITFSVEQATTMERNVGNFQIPAGSLTVFFVIAILLTLAVNDRIIMPLWKKLNGKTGFSNLQRIAIGLLLSALGMAAASLIEVKRLSVAKGVKGNQTTLPISVFLLVPQFFLVGSGEAFIYTGQLDFFITQSPKGMKTMSTGLFLTTLSLGFFVSSFLVSVVKKVTGTRDGQGWLADHINKGRLDLFYALLTILSFINFVAFLVCAFWYKPKKPKPSMQMGAINGSSVEEKC