AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene033171


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033171.t1 MTR_4g107530 99.005 603 6 0 1 603 3 605 0.0 1228
MS.gene033171.t1 MTR_4g107510 68.166 578 182 2 5 581 10 586 0.0 832
MS.gene033171.t1 MTR_4g107580 65.719 598 195 4 14 602 5 601 0.0 816
MS.gene033171.t1 MTR_8g469480 47.018 570 286 6 33 593 40 602 2.46e-176 513
MS.gene033171.t1 MTR_5g038060 45.205 584 308 5 1 579 1 577 3.76e-176 513
MS.gene033171.t1 MTR_4g107610 41.107 596 323 9 1 587 6 582 1.28e-156 462
MS.gene033171.t1 MTR_5g038190 38.908 568 335 6 17 579 8 568 1.47e-146 436
MS.gene033171.t1 MTR_8g469470 38.754 578 336 7 12 581 16 583 3.56e-146 435
MS.gene033171.t1 MTR_7g064780 37.500 600 339 10 18 598 1 583 1.98e-136 410
MS.gene033171.t1 MTR_7g064800 38.989 554 322 5 34 580 29 573 5.35e-133 402
MS.gene033171.t1 MTR_8g103233 38.462 585 343 10 14 596 2 571 1.38e-131 397
MS.gene033171.t1 MTR_7g088825 37.265 585 333 13 6 582 10 568 3.69e-126 384
MS.gene033171.t1 MTR_7g088790 36.808 614 353 10 6 599 10 608 7.29e-125 381
MS.gene033171.t1 MTR_5g055000 36.014 572 345 9 34 600 21 576 8.63e-125 380
MS.gene033171.t1 MTR_3g462710 37.091 550 331 7 35 581 28 565 3.69e-124 378
MS.gene033171.t1 MTR_2g101640 35.294 578 362 9 28 603 20 587 4.02e-124 380
MS.gene033171.t1 MTR_2g101650 36.237 574 356 8 26 597 19 584 1.41e-123 377
MS.gene033171.t1 MTR_7g067010 36.679 548 332 7 35 580 28 562 2.86e-122 373
MS.gene033171.t1 MTR_4g015080 35.456 581 350 10 12 583 11 575 2.33e-120 369
MS.gene033171.t1 MTR_4g011280 35.231 562 352 9 31 590 32 583 1.75e-116 359
MS.gene033171.t1 MTR_7g088820 34.694 588 361 12 12 590 5 578 1.06e-114 354
MS.gene033171.t1 MTR_5g012270 34.418 584 358 10 9 582 7 575 1.30e-114 354
MS.gene033171.t1 MTR_2g101610 36.442 579 348 11 28 603 24 585 2.04e-114 355
MS.gene033171.t1 MTR_2g101590 36.552 580 346 11 28 603 23 584 1.93e-113 352
MS.gene033171.t1 MTR_1g009200 34.826 603 363 12 2 599 7 584 2.58e-113 351
MS.gene033171.t1 MTR_3g112460 34.596 581 340 12 13 581 2 554 3.97e-112 347
MS.gene033171.t1 MTR_3g112470 34.007 594 349 13 13 591 2 567 2.14e-110 342
MS.gene033171.t1 MTR_1g026740 34.211 570 356 11 8 576 2 553 1.05e-109 340
MS.gene033171.t1 MTR_1g057460 35.097 567 339 10 12 576 25 564 1.83e-109 340
MS.gene033171.t1 MTR_5g014150 32.437 595 382 9 11 600 23 602 2.16e-109 341
MS.gene033171.t1 MTR_3g112450 33.895 593 347 12 16 591 5 569 3.04e-108 337
MS.gene033171.t1 MTR_2g101560 36.269 579 348 12 28 603 24 584 4.67e-107 336
MS.gene033171.t1 MTR_1g026770 34.735 547 339 12 34 576 18 550 1.96e-106 332
MS.gene033171.t1 MTR_4g019580 33.898 590 361 11 6 586 7 576 6.89e-106 332
MS.gene033171.t1 MTR_7g098200 33.454 553 342 6 31 580 29 558 7.95e-106 331
MS.gene033171.t1 MTR_7g098200 33.153 555 351 6 31 580 29 568 8.82e-106 332
MS.gene033171.t1 MTR_3g462710 37.821 468 276 7 117 581 1 456 4.58e-105 325
MS.gene033171.t1 MTR_5g012290 31.208 596 383 10 5 591 7 584 6.19e-105 329
MS.gene033171.t1 MTR_7g065080 33.503 588 355 12 11 589 8 568 3.81e-104 327
MS.gene033171.t1 MTR_1g026750 33.862 567 359 11 25 585 8 564 9.22e-104 325
MS.gene033171.t1 MTR_2g093640 34.790 572 339 10 14 580 6 548 7.59e-103 322
MS.gene033171.t1 MTR_7g098160 32.756 577 349 9 35 595 37 590 1.41e-102 323
MS.gene033171.t1 MTR_7g088820 34.915 527 321 11 72 590 4 516 1.98e-102 321
MS.gene033171.t1 MTR_1g057460 35.577 520 306 10 59 576 1 493 1.37e-101 317
MS.gene033171.t1 MTR_4g101380 33.221 593 376 9 5 590 7 586 2.47e-101 320
MS.gene033171.t1 MTR_7g006540 34.872 585 345 12 34 600 66 632 3.52e-101 321
MS.gene033171.t1 MTR_7g098090 32.927 574 357 10 35 595 37 595 6.20e-101 319
MS.gene033171.t1 MTR_3g069420 34.435 575 348 10 34 597 37 593 9.39e-101 318
MS.gene033171.t1 MTR_3g069500 33.333 597 363 10 1 589 1 570 2.40e-100 317
MS.gene033171.t1 MTR_1g075440 33.159 573 365 7 34 602 31 589 7.51e-100 316
MS.gene033171.t1 MTR_3g014790 34.211 570 330 7 33 587 19 558 2.29e-99 313
MS.gene033171.t1 MTR_0236s0050 35.192 520 308 10 59 576 1 493 1.44e-98 310
MS.gene033171.t1 MTR_7g098040 31.597 576 371 10 35 603 38 597 8.32e-98 311
MS.gene033171.t1 MTR_4g098800 31.993 572 371 7 11 577 15 573 8.47e-98 310
MS.gene033171.t1 MTR_7g010820 32.538 587 385 7 14 595 7 587 9.67e-98 310
MS.gene033171.t1 MTR_3g069440 33.095 559 353 8 35 589 37 578 1.03e-97 310
MS.gene033171.t1 MTR_7g005930 31.010 574 374 8 6 577 14 567 3.54e-97 308
MS.gene033171.t1 MTR_7g098220 32.162 569 366 6 35 598 34 587 3.66e-97 309
MS.gene033171.t1 MTR_4g098800 31.993 572 371 7 11 577 80 638 4.86e-97 310
MS.gene033171.t1 MTR_2g093160 33.938 551 334 9 34 580 24 548 5.78e-96 304
MS.gene033171.t1 MTR_5g085850 32.209 593 372 9 5 594 6 571 8.06e-96 305
MS.gene033171.t1 MTR_1g116930 32.118 576 361 10 34 598 26 582 1.47e-95 305
MS.gene033171.t1 MTR_3g005010 33.810 559 317 11 34 583 33 547 2.30e-95 303
MS.gene033171.t1 MTR_7g098230 32.000 550 346 7 40 580 35 565 3.42e-95 303
MS.gene033171.t1 MTR_4g114340 33.755 554 348 8 34 584 27 564 4.63e-95 303
MS.gene033171.t1 MTR_7g065080 34.653 505 299 10 90 589 3 481 1.13e-94 299
MS.gene033171.t1 MTR_8g038880 32.815 579 341 9 34 601 23 564 3.35e-94 300
MS.gene033171.t1 MTR_1g042310 33.214 560 354 9 34 588 29 573 9.97e-94 300
MS.gene033171.t1 MTR_7g098180 30.473 571 376 6 35 599 35 590 5.16e-93 298
MS.gene033171.t1 MTR_0294s0020 34.192 582 337 14 11 580 3 550 2.73e-92 295
MS.gene033171.t1 MTR_7g098220 31.720 558 361 6 46 598 1 543 2.83e-92 295
MS.gene033171.t1 MTR_4g033325 34.820 583 332 13 11 580 3 550 5.79e-92 294
MS.gene033171.t1 MTR_3g072300 33.333 558 350 10 35 587 28 568 1.41e-91 294
MS.gene033171.t1 MTR_7g013270 31.485 559 363 9 34 588 93 635 2.39e-91 295
MS.gene033171.t1 MTR_1g042310 33.272 547 345 9 47 588 5 536 5.93e-91 291
MS.gene033171.t1 MTR_7g088820 34.855 482 292 11 117 590 1 468 8.93e-91 289
MS.gene033171.t1 MTR_1g042310 33.333 540 340 9 54 588 5 529 3.68e-89 286
MS.gene033171.t1 MTR_2g093180 33.874 555 330 11 34 580 24 549 5.90e-89 286
MS.gene033171.t1 MTR_1g041835 32.332 566 348 7 35 588 31 573 1.08e-88 286
MS.gene033171.t1 MTR_4g033315 33.759 548 331 10 35 580 35 552 1.31e-88 285
MS.gene033171.t1 MTR_4g033310 33.759 548 331 10 35 580 35 552 1.31e-88 285
MS.gene033171.t1 MTR_1g041815 32.759 580 352 8 35 602 31 584 3.17e-88 285
MS.gene033171.t1 MTR_7g098200 33.049 469 294 6 117 580 1 454 5.09e-87 279
MS.gene033171.t1 MTR_1g041875 31.599 538 327 6 34 559 32 540 6.65e-87 281
MS.gene033171.t1 MTR_4g033330 32.264 561 344 11 6 561 4 533 2.54e-85 276
MS.gene033171.t1 MTR_7g111260 32.414 580 355 12 11 585 6 553 4.84e-85 277
MS.gene033171.t1 MTR_1g085090 31.957 557 348 11 34 585 22 552 9.06e-85 276
MS.gene033171.t1 MTR_2g005130 29.816 597 368 14 4 581 1 565 1.89e-84 275
MS.gene033171.t1 MTR_1g041885 32.941 510 317 7 54 559 5 493 2.62e-84 273
MS.gene033171.t1 MTR_3g100980 31.359 574 352 12 28 586 11 557 4.08e-83 271
MS.gene033171.t1 MTR_4g033375 33.988 509 294 12 26 522 18 496 2.56e-77 254
MS.gene033171.t1 MTR_3g100980 29.900 602 352 13 28 586 11 585 2.68e-77 256
MS.gene033171.t1 MTR_4g033325 36.036 444 258 9 140 580 6 426 4.19e-77 251
MS.gene033171.t1 MTR_4g033325 36.036 444 258 9 140 580 32 452 5.48e-77 252
MS.gene033171.t1 MTR_2g017750 29.196 572 385 8 26 579 19 588 1.02e-76 255
MS.gene033171.t1 MTR_4g107670 29.655 580 357 8 29 583 22 575 2.41e-76 254
MS.gene033171.t1 MTR_4g033395 33.202 509 298 11 26 522 18 496 2.56e-76 251
MS.gene033171.t1 MTR_8g469310 30.351 570 375 7 30 583 12 575 5.08e-75 250
MS.gene033171.t1 MTR_4g123537 29.950 601 383 15 9 600 21 592 6.21e-74 248
MS.gene033171.t1 MTR_4g033385 34.562 434 265 7 149 580 37 453 6.81e-74 244
MS.gene033171.t1 MTR_5g038380 28.546 571 352 8 40 583 37 578 2.07e-71 241
MS.gene033171.t1 MTR_7g098150 33.175 422 265 5 35 451 37 446 6.35e-71 237
MS.gene033171.t1 MTR_8g087810 29.340 576 395 10 13 579 3 575 3.58e-66 227
MS.gene033171.t1 MTR_8g087780 29.609 537 368 8 13 542 3 536 5.76e-66 226
MS.gene033171.t1 MTR_6g008690 30.216 556 332 15 48 585 24 541 1.32e-64 221
MS.gene033171.t1 MTR_1g009170 33.007 409 215 11 155 559 5 358 1.82e-63 214
MS.gene033171.t1 MTR_7g098210 27.083 528 295 11 54 580 5 443 5.99e-54 190
MS.gene033171.t1 MTR_4g024930 26.990 578 375 14 11 577 12 553 1.28e-52 189
MS.gene033171.t1 MTR_4g033310 36.299 281 167 5 300 580 220 488 5.10e-46 170
MS.gene033171.t1 MTR_4g033310 34.706 170 99 2 35 204 35 192 1.87e-19 92.0
MS.gene033171.t1 MTR_7g051880 28.150 508 310 13 74 576 68 525 3.34e-42 159
MS.gene033171.t1 MTR_7g052600 27.559 508 313 12 74 576 68 525 1.04e-41 158
MS.gene033171.t1 MTR_7g051830 27.038 503 322 8 74 576 68 525 9.99e-40 152
MS.gene033171.t1 MTR_8g091265 39.496 119 68 4 302 418 3 119 1.68e-19 85.5
MS.gene033171.t1 MTR_3g065350 30.952 168 105 2 343 510 1 157 6.71e-19 84.7
MS.gene033171.t1 MTR_7g064160 34.545 110 60 2 18 115 4 113 4.62e-16 75.1
MS.gene033171.t1 MTR_4g033390 35.632 87 56 0 494 580 30 116 6.02e-12 63.5
MS.gene033171.t1 MTR_2g093650 38.235 102 60 2 350 451 33 131 6.16e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene033171.t1 AT5G62680 59.107 582 234 3 21 598 33 614 0.0 718
MS.gene033171.t1 AT1G18880 57.338 586 245 3 14 597 2 584 0.0 705
MS.gene033171.t1 AT3G47960 59.892 556 220 2 25 579 55 608 0.0 683
MS.gene033171.t1 AT1G69870 46.404 584 294 6 26 597 44 620 3.92e-179 521
MS.gene033171.t1 AT1G27080 44.643 560 280 8 28 579 11 548 2.03e-159 469
MS.gene033171.t1 AT5G28470 41.547 556 301 9 34 583 20 557 4.02e-148 439
MS.gene033171.t1 AT1G27080 44.508 528 263 8 60 579 1 506 6.35e-147 435
MS.gene033171.t1 AT5G28470 41.367 556 300 10 34 583 20 555 3.62e-145 432
MS.gene033171.t1 AT1G52190 36.077 571 349 9 11 576 7 566 3.62e-131 397
MS.gene033171.t1 AT1G69860 39.170 554 312 6 34 583 21 553 5.94e-131 395
MS.gene033171.t1 AT3G16180 36.155 567 353 8 34 597 26 586 1.83e-126 385
MS.gene033171.t1 AT1G68570 36.288 598 359 9 11 603 3 583 2.94e-123 377
MS.gene033171.t1 AT2G02040 36.724 580 347 10 13 585 19 585 9.83e-122 372
MS.gene033171.t1 AT1G62200 37.108 574 336 7 2 571 27 579 1.02e-121 372
MS.gene033171.t1 AT3G54140 36.430 549 334 8 35 580 28 564 3.10e-121 370
MS.gene033171.t1 AT3G54140 36.430 549 334 8 35 580 28 564 3.10e-121 370
MS.gene033171.t1 AT5G01180 36.577 555 336 7 35 586 29 570 2.86e-120 368
MS.gene033171.t1 AT5G01180 36.577 555 336 7 35 586 29 570 2.86e-120 368
MS.gene033171.t1 AT5G01180 36.577 555 336 7 35 586 29 570 2.86e-120 368
MS.gene033171.t1 AT1G68570 36.926 566 335 9 43 603 5 553 6.07e-120 367
MS.gene033171.t1 AT1G62200 36.213 602 332 9 2 571 27 608 1.71e-118 365
MS.gene033171.t1 AT1G62200 36.213 602 332 9 2 571 41 622 2.43e-118 365
MS.gene033171.t1 AT3G45650 35.879 563 334 9 23 585 14 549 2.93e-113 350
MS.gene033171.t1 AT3G45660 35.788 584 342 10 6 589 2 552 4.75e-113 349
MS.gene033171.t1 AT3G45660 35.788 584 342 10 6 589 2 552 4.75e-113 349
MS.gene033171.t1 AT3G45660 35.788 584 342 10 6 589 23 573 6.46e-113 349
MS.gene033171.t1 AT2G02020 36.555 569 308 8 8 571 15 535 3.50e-112 346
MS.gene033171.t1 AT3G45680 36.192 583 326 12 23 599 14 556 1.70e-111 345
MS.gene033171.t1 AT3G45720 34.471 586 342 10 17 598 5 552 3.22e-109 339
MS.gene033171.t1 AT3G45700 34.589 584 328 11 18 589 1 542 9.83e-109 337
MS.gene033171.t1 AT3G45650 34.295 589 334 10 23 585 14 575 1.85e-107 335
MS.gene033171.t1 AT4G21680 32.923 568 370 6 21 584 18 578 4.27e-105 329
MS.gene033171.t1 AT3G54450 33.160 576 350 9 24 589 2 552 9.29e-104 325
MS.gene033171.t1 AT3G45710 32.534 584 352 10 18 589 1 554 7.78e-103 323
MS.gene033171.t1 AT3G53960 32.517 572 362 8 21 584 23 578 2.82e-102 322
MS.gene033171.t1 AT2G37900 32.419 583 364 9 8 584 13 571 1.32e-100 317
MS.gene033171.t1 AT1G32450 31.220 615 384 13 3 598 5 599 3.40e-95 304
MS.gene033171.t1 AT5G13400 32.509 566 360 10 34 590 67 619 1.37e-93 300
MS.gene033171.t1 AT3G21670 31.164 584 370 8 24 597 22 583 3.87e-93 298
MS.gene033171.t1 AT1G12110 31.687 587 383 7 11 590 7 582 7.87e-93 297
MS.gene033171.t1 AT5G46050 31.754 570 368 8 33 596 28 582 1.46e-92 296
MS.gene033171.t1 AT2G02020 34.446 569 299 11 8 571 15 514 2.19e-92 294
MS.gene033171.t1 AT2G37900 33.006 509 317 7 78 584 6 492 7.33e-91 290
MS.gene033171.t1 AT5G46040 31.687 587 365 10 21 587 4 574 1.30e-90 291
MS.gene033171.t1 AT1G59740 31.453 585 358 11 11 575 12 573 1.82e-90 291
MS.gene033171.t1 AT2G40460 32.671 554 348 9 35 584 28 560 2.20e-90 291
MS.gene033171.t1 AT3G45690 31.874 571 317 13 28 598 15 513 6.68e-90 288
MS.gene033171.t1 AT2G26690 31.283 569 367 7 21 584 14 563 3.08e-89 288
MS.gene033171.t1 AT2G26690 31.627 547 350 7 43 584 3 530 1.06e-86 280
MS.gene033171.t1 AT5G19640 29.585 578 362 10 34 597 62 608 2.36e-85 278
MS.gene033171.t1 AT1G22550 31.399 586 365 9 10 583 3 563 2.73e-85 277
MS.gene033171.t1 AT1G33440 31.023 577 351 12 20 576 18 567 4.87e-85 277
MS.gene033171.t1 AT1G22540 33.633 556 333 10 34 584 33 557 7.78e-85 275
MS.gene033171.t1 AT2G26690 31.471 537 344 7 53 584 1 518 1.16e-83 272
MS.gene033171.t1 AT1G72130 31.892 555 324 8 34 581 28 535 1.77e-81 266
MS.gene033171.t1 AT1G22570 31.907 561 340 10 10 555 3 536 6.20e-81 265
MS.gene033171.t1 AT1G72140 30.427 585 354 10 11 580 7 553 1.05e-80 265
MS.gene033171.t1 AT1G72125 31.787 582 368 9 5 582 3 559 1.61e-80 264
MS.gene033171.t1 AT1G27040 30.275 545 360 6 40 581 36 563 1.03e-77 257
MS.gene033171.t1 AT1G27040 30.275 545 360 6 40 581 32 559 1.07e-77 257
MS.gene033171.t1 AT1G72120 32.534 584 359 10 5 583 3 556 5.02e-77 255
MS.gene033171.t1 AT1G27040 30.370 540 356 6 45 581 9 531 1.20e-76 253
MS.gene033171.t1 AT1G69850 29.422 571 381 9 29 585 23 585 1.18e-75 252
MS.gene033171.t1 AT5G46050 31.753 485 311 7 117 596 1 470 1.41e-75 249
MS.gene033171.t1 AT1G22570 31.931 523 320 9 42 555 4 499 1.73e-75 250
MS.gene033171.t1 AT5G62730 29.234 561 342 10 40 582 6 529 1.23e-71 240
MS.gene033171.t1 AT5G62730 29.234 561 342 10 40 582 65 588 3.94e-71 240
MS.gene033171.t1 AT1G72130 33.636 440 249 7 149 581 14 417 3.53e-70 233
MS.gene033171.t1 AT1G72130 33.636 440 249 7 149 581 14 417 3.53e-70 233
MS.gene033171.t1 AT5G14940 27.094 561 353 12 48 587 24 549 4.29e-63 218
MS.gene033171.t1 AT3G25260 27.903 534 330 10 45 576 35 515 3.50e-60 209
MS.gene033171.t1 AT3G01350 25.614 570 360 14 48 587 24 559 7.80e-53 190
MS.gene033171.t1 AT3G25280 26.426 526 328 16 58 576 48 521 4.08e-46 171
MS.gene033171.t1 AT5G11570 33.984 256 156 2 321 576 234 476 2.96e-41 156
MS.gene033171.t1 AT5G11570 32.735 223 142 4 33 252 15 232 6.05e-35 138
MS.gene033171.t1 AT2G38100 24.774 553 358 18 55 595 14 520 1.83e-25 110
MS.gene033171.t1 AT2G38100 24.774 553 358 18 55 595 20 526 2.18e-25 110
MS.gene033171.t1 AT2G38100 24.590 549 356 18 59 595 2 504 2.55e-25 110

Find 140 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTCTGTAATCTTCTTTA+TGG 0.098985 8.3:+16157099 MS.gene033171:CDS
GCTATAGAAATTGTAAATTT+AGG 0.211624 8.3:+16158157 MS.gene033171:CDS
TCTTCTGTAATCTTCTTTAT+GGG 0.213338 8.3:+16157100 MS.gene033171:CDS
CATCCCCTGTAGTTAATCTT+AGG 0.220990 8.3:-16156121 None:intergenic
TTCCTTATACTTATCAATTC+AGG 0.244025 8.3:+16157281 MS.gene033171:CDS
TTTAACTTTCACATACAATT+TGG 0.252619 8.3:-16157125 None:intergenic
CAACACAGAATCTGGGAAAA+AGG 0.270691 8.3:+16156940 MS.gene033171:CDS
TTTAATCCCAACACAGAATC+TGG 0.284033 8.3:+16156932 MS.gene033171:CDS
TACCTGAATTGATAAGTATA+AGG 0.310769 8.3:-16157283 None:intergenic
CAGTCTCACCATTTGTCATT+TGG 0.322103 8.3:-16156045 None:intergenic
TGATGATCAGTGTGGCAATT+TGG 0.322913 8.3:+16157651 MS.gene033171:CDS
AATATTATCAACATCTTTAA+CGG 0.326470 8.3:+16156365 MS.gene033171:CDS
TCTGCGGCGATCTTCAACTA+TGG 0.336163 8.3:-16157801 None:intergenic
CTCTACTATGCGGCCCATGC+AGG 0.340320 8.3:+16158007 MS.gene033171:CDS
GAAATAGCAATTTACCAAAA+AGG 0.352703 8.3:-16156477 None:intergenic
ACAGTTCTAAAGACTGGTTT+AGG 0.355144 8.3:+16156848 MS.gene033171:CDS
CGACCATGTAACTTAGCATT+TGG 0.357095 8.3:+16156899 MS.gene033171:CDS
TGGAATTTATTTGATCTTGC+GGG 0.360208 8.3:-16157412 None:intergenic
TTTGCCACTCTGTGGGTCCT+TGG 0.367474 8.3:-16156823 None:intergenic
GAGAACATGAGAAGCATTGC+AGG 0.375666 8.3:+16157980 MS.gene033171:CDS
GTGAGCTGGGCTGTCGGTTT+GGG 0.376937 8.3:+16157052 MS.gene033171:CDS
CTGCAAACTGCATAGATTCC+AGG 0.378684 8.3:-16157453 None:intergenic
ATCACTGTCAAATCTAAAAC+CGG 0.384021 8.3:+16158073 MS.gene033171:CDS
ACCAACTTTGCAACATTGAT+AGG 0.385520 8.3:+16156392 MS.gene033171:CDS
CGGCACTTTATCCAATCTAT+TGG 0.392290 8.3:+16156298 MS.gene033171:CDS
AACTTGCACTATGCTAGTTA+TGG 0.393823 8.3:-16157161 None:intergenic
TGTTATGTGCACAGTGGTAT+AGG 0.396836 8.3:+16158188 MS.gene033171:CDS
TGAAGATCGCCGCAGAACTA+TGG 0.401837 8.3:+16157808 MS.gene033171:CDS
TGTGAGCTGGGCTGTCGGTT+TGG 0.411158 8.3:+16157051 MS.gene033171:CDS
TAAAACCGGGAGTTGGTTGC+CGG 0.416053 8.3:+16158087 MS.gene033171:CDS
TGTTGAGAGTGTTACCCATA+TGG 0.417989 8.3:+16157498 MS.gene033171:CDS
ACTTGCACTATGCTAGTTAT+GGG 0.418400 8.3:-16157160 None:intergenic
TCCTATCAATGTTGCAAAGT+TGG 0.424224 8.3:-16156393 None:intergenic
GACTGGTTTAGGATTATTGA+TGG 0.428176 8.3:+16156859 MS.gene033171:CDS
CATGAATGCTTCAGCAAGTC+CGG 0.434921 8.3:-16157918 None:intergenic
GGATCTGAACAAGGGGAGAT+TGG 0.435993 8.3:+16158111 MS.gene033171:CDS
TCTACTATGCGGCCCATGCA+GGG 0.436994 8.3:+16158008 MS.gene033171:CDS
GCTGATTCCTCAGCTGGCAT+TGG 0.439801 8.3:+16157895 MS.gene033171:CDS
AAGGTCATGCCCTTCATTAT+AGG 0.442621 8.3:+16156145 MS.gene033171:CDS
ATTCCTCAGCTGGCATTGGC+CGG 0.445828 8.3:+16157899 MS.gene033171:CDS
TCAAATAACTTGCCCCTGCA+TGG 0.447972 8.3:-16158021 None:intergenic
ATCCCCTGTAGTTAATCTTA+GGG 0.448750 8.3:-16156120 None:intergenic
CGAGTGATTCTCTGGAGTAA+AGG 0.450585 8.3:-16157701 None:intergenic
ACGGATCTGCTTCTGATCCC+TGG 0.454119 8.3:+16157435 MS.gene033171:CDS
TTAGAATTCATTGTCTTGGC+AGG 0.457206 8.3:-16157256 None:intergenic
CTCCCCTTGTTCAGATCCTC+CGG 0.458757 8.3:-16158106 None:intergenic
CTTCTGTAATCTTCTTTATG+GGG 0.464112 8.3:+16157101 MS.gene033171:CDS
TCTGTGGCTGATTCCTCAGC+TGG 0.470417 8.3:+16157889 MS.gene033171:CDS
AGTAAGATAGACCAATAGAT+TGG 0.474345 8.3:-16156309 None:intergenic
TTATTGATGGTAGGAGCTGC+AGG 0.476831 8.3:+16156872 MS.gene033171:CDS
TTGTGGTTGCAACAAAGAAA+AGG 0.477347 8.3:+16157185 MS.gene033171:CDS
TTTCTTGATTCCACTTCTAA+GGG 0.478453 8.3:-16157842 None:intergenic
GTTGAGAGTGTTACCCATAT+GGG 0.479347 8.3:+16157499 MS.gene033171:CDS
AATGAAAATAGCGGAGATGA+TGG 0.480606 8.3:+16156097 MS.gene033171:CDS
TTGGAATTTATTTGATCTTG+CGG 0.481494 8.3:-16157413 None:intergenic
CTCTGTGGGTCCTTGGCATG+TGG 0.482952 8.3:-16156816 None:intergenic
GCAATGCTTCTCATGTTCTC+AGG 0.486361 8.3:-16157977 None:intergenic
AACTGTCATTTGCCACTCTG+TGG 0.487700 8.3:-16156831 None:intergenic
AAGACATAGTAGGATGCTCC+TGG 0.489946 8.3:-16157626 None:intergenic
ACATACAGTCAAATGTGAGC+TGG 0.495911 8.3:+16157038 MS.gene033171:CDS
CAAATGACAGTTCTAAAGAC+TGG 0.496084 8.3:+16156842 MS.gene033171:CDS
TCTAATTCTTCACATGGATG+TGG 0.497410 8.3:-16156788 None:intergenic
GTCTTGCTCACCTATAATGA+AGG 0.498087 8.3:-16156155 None:intergenic
TTCTGTAATCTTCTTTATGG+GGG 0.502130 8.3:+16157102 MS.gene033171:CDS
CAGTTTGCAGCAAGTGGAAG+AGG 0.504000 8.3:+16157466 MS.gene033171:CDS
GATCATCAGAAAGACATAGT+AGG 0.505688 8.3:-16157636 None:intergenic
TATGTAGACAATAATTGTTA+AGG 0.508716 8.3:-16157020 None:intergenic
CAAAGCAAGTTCATGATCCC+AGG 0.512280 8.3:+16157608 MS.gene033171:CDS
CTAGTTATGGGACTACCACT+TGG 0.512398 8.3:-16157148 None:intergenic
GACAAAAGCATCAAAGCTGC+AGG 0.512838 8.3:-16157079 None:intergenic
TTTGAGAAGCTTGGAGCCAT+CGG 0.517505 8.3:+16156278 MS.gene033171:CDS
CTCCTTCAGAGGATGGGCAT+TGG 0.517847 8.3:+16157743 MS.gene033171:CDS
GGTGCAATTTCATCAATGTC+AGG 0.520086 8.3:+16157866 MS.gene033171:CDS
ATCATGAACCAAATGACAAA+TGG 0.523642 8.3:+16156037 None:intergenic
AAGTTTAGAATTCATTGTCT+TGG 0.526994 8.3:-16157260 None:intergenic
TAGATTTGACAGTGATATGG+TGG 0.529358 8.3:-16158066 None:intergenic
ATGGCCCTAAGATTAACTAC+AGG 0.529462 8.3:+16156116 MS.gene033171:CDS
ATCCTCCGGCAACCAACTCC+CGG 0.531321 8.3:-16158092 None:intergenic
GTGGTATAGGTACAAAGAAA+CGG 0.533314 8.3:+16158201 MS.gene033171:CDS
GGATCAGCAGCTTCTTCACT+TGG 0.533873 8.3:+16156963 MS.gene033171:CDS
CATCACACTCCTTCAGAGGA+TGG 0.539146 8.3:+16157736 MS.gene033171:CDS
CCAGAGAATCACTCGAAAAG+AGG 0.540228 8.3:+16157709 MS.gene033171:CDS
GGTTTAGGATTATTGATGGT+AGG 0.542685 8.3:+16156863 MS.gene033171:CDS
GGTACATAGTTGAATAGTGA+AGG 0.544746 8.3:-16157235 None:intergenic
TTAGAAGTGGAATCAAGAAA+AGG 0.547885 8.3:+16157845 MS.gene033171:CDS
TAGCATAGTGCAAGTTATTG+TGG 0.549021 8.3:+16157168 MS.gene033171:CDS
GCTCCAAATGCTAAGTTACA+TGG 0.552073 8.3:-16156902 None:intergenic
CTAAGATTAACTACAGGGGA+TGG 0.553300 8.3:+16156122 MS.gene033171:CDS
CATACAGTCAAATGTGAGCT+GGG 0.554401 8.3:+16157039 MS.gene033171:CDS
CAAATAACTTGCCCCTGCAT+GGG 0.555881 8.3:-16158020 None:intergenic
TCTTACTACAGTATTCAACT+TGG 0.559761 8.3:+16156325 MS.gene033171:CDS
ACACTAAAATAGTGTGCTGT+TGG 0.560484 8.3:-16157553 None:intergenic
TTAATCCCAACACAGAATCT+GGG 0.569670 8.3:+16156933 MS.gene033171:CDS
ATCACACTCCTTCAGAGGAT+GGG 0.571291 8.3:+16157737 MS.gene033171:CDS
TCTATGCAGTTTGCAGCAAG+TGG 0.573284 8.3:+16157460 MS.gene033171:CDS
GGGATCAGAAGCAGATCCGT+TGG 0.574009 8.3:-16157432 None:intergenic
CAGAGAATCACTCGAAAAGA+GGG 0.575027 8.3:+16157710 MS.gene033171:CDS
TGCCAATGCCCATCCTCTGA+AGG 0.576611 8.3:-16157745 None:intergenic
TGCAAACTGCATAGATTCCA+GGG 0.576824 8.3:-16157452 None:intergenic
AAAACGGCTGAAACCCATAT+GGG 0.577568 8.3:-16157512 None:intergenic
ACTGTCATTTGCCACTCTGT+GGG 0.577677 8.3:-16156830 None:intergenic
GATTAACTACAGGGGATGGA+AGG 0.578985 8.3:+16156126 MS.gene033171:CDS
GCCTGTCAGATAAAAGCGCT+TGG 0.579931 8.3:-16157577 None:intergenic
TCAAATGTGAGCTGGGCTGT+CGG 0.580630 8.3:+16157046 MS.gene033171:CDS
TTAGAAAACACCACATGCCA+AGG 0.591254 8.3:+16156806 MS.gene033171:CDS
AGTCCGGCCAATGCCAGCTG+AGG 0.598859 8.3:-16157902 None:intergenic
TCAAATCTAAAACCGGGAGT+TGG 0.599927 8.3:+16158080 MS.gene033171:CDS
GAAAAGGAAGCTGAAGCTCG+CGG 0.601282 8.3:+16157201 MS.gene033171:CDS
GGAATTTATTTGATCTTGCG+GGG 0.601377 8.3:-16157411 None:intergenic
CTACTATGCGGCCCATGCAG+GGG 0.603035 8.3:+16158009 MS.gene033171:CDS
TCTTACTAAACCCTTAGAAG+TGG 0.613587 8.3:+16157832 MS.gene033171:CDS
TGTGTTGGGATTAAACTGAT+CGG 0.614941 8.3:-16156924 None:intergenic
AACCGGGAGTTGGTTGCCGG+AGG 0.616355 8.3:+16158090 MS.gene033171:CDS
GTGGCATCACACTCCTTCAG+AGG 0.618161 8.3:+16157732 MS.gene033171:CDS
TAGATTGGATAAAGTGCCGA+TGG 0.618975 8.3:-16156294 None:intergenic
TGCCGGAGGATCTGAACAAG+GGG 0.626761 8.3:+16158104 MS.gene033171:CDS
TGGCCCTAAGATTAACTACA+GGG 0.627240 8.3:+16156117 MS.gene033171:CDS
TCTTGCTCACCTATAATGAA+GGG 0.631706 8.3:-16156154 None:intergenic
AGACATAGTAGGATGCTCCT+GGG 0.632783 8.3:-16157625 None:intergenic
TATGTGAAAGTTAAACCAAG+TGG 0.633751 8.3:+16157133 MS.gene033171:CDS
CAAGATCAAATAAATTCCAA+CGG 0.637168 8.3:+16157416 MS.gene033171:CDS
GTTGCCGGAGGATCTGAACA+AGG 0.637725 8.3:+16158102 MS.gene033171:CDS
CAAATGCTAAGTTACATGGT+CGG 0.638668 8.3:-16156898 None:intergenic
GTACATAGTTGAATAGTGAA+GGG 0.638925 8.3:-16157234 None:intergenic
TTTCATCAATGTCAGGTCTG+TGG 0.645980 8.3:+16157873 MS.gene033171:CDS
TCACTGTCAAATCTAAAACC+GGG 0.646323 8.3:+16158074 MS.gene033171:CDS
TATTGATGGTAGGAGCTGCA+GGG 0.662055 8.3:+16156873 MS.gene033171:CDS
TGCAGGATCTCTCTACTATG+CGG 0.664807 8.3:+16157997 MS.gene033171:CDS
TAGTAAGAGCCATAGTTCTG+CGG 0.664921 8.3:-16157817 None:intergenic
TGACAGGTTTCTTGACAAAG+CGG 0.665216 8.3:+16157379 MS.gene033171:intron
TTGCCGGAGGATCTGAACAA+GGG 0.680587 8.3:+16158103 MS.gene033171:CDS
AGAATCACTCGAAAAGAGGG+TGG 0.681490 8.3:+16157713 MS.gene033171:CDS
TGAGACTGTGGAGAATGAAG+AGG 0.691991 8.3:+16156060 MS.gene033171:CDS
GACACTGTCATTCTGCACCG+TGG 0.697466 8.3:+16156451 MS.gene033171:CDS
AATGACAAATGGTGAGACTG+TGG 0.703194 8.3:+16156048 MS.gene033171:CDS
GGCCCTAAGATTAACTACAG+GGG 0.705151 8.3:+16156118 MS.gene033171:CDS
CATGCCAAGGACCCACAGAG+TGG 0.721733 8.3:+16156819 MS.gene033171:CDS
TTGCTGAAGAATGAAAATAG+CGG 0.731233 8.3:+16156088 MS.gene033171:CDS
GCTTTGTGTTATGTGCACAG+TGG 0.748088 8.3:+16158182 MS.gene033171:CDS
TGTCTTTCTGATGATCAGTG+TGG 0.749278 8.3:+16157643 MS.gene033171:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATCAACATCTTTAA+CGG + chr8.3:16156365-16156384 MS.gene033171:CDS 15.0%
!!! GATATAATTATTTTCAATAG+TGG + chr8.3:16157337-16157356 MS.gene033171:intron 15.0%
!!! TTATGTTATGCATTTTAAAA+TGG - chr8.3:16156643-16156662 None:intergenic 15.0%
!! ATAAAACAATCTGAAAAAGA+TGG + chr8.3:16158253-16158272 MS.gene033171:CDS 20.0%
!! GATAACAACATAGTAAAAAA+CGG - chr8.3:16157531-16157550 None:intergenic 20.0%
!! GCTATAGAAATTGTAAATTT+AGG + chr8.3:16158157-16158176 MS.gene033171:CDS 20.0%
!! GTGTTTATCAACAAAAAAAA+TGG - chr8.3:16156530-16156549 None:intergenic 20.0%
!! TATCAACAAAAAAAATGGAA+TGG - chr8.3:16156525-16156544 None:intergenic 20.0%
!! TATGTAGACAATAATTGTTA+AGG - chr8.3:16157023-16157042 None:intergenic 20.0%
!! TTAATACTTGTCAATATCAT+TGG - chr8.3:16156586-16156605 None:intergenic 20.0%
!!! TATTTTCAATAGTGGTTTAA+AGG + chr8.3:16157345-16157364 MS.gene033171:intron 20.0%
!!! TTTAACTTTCACATACAATT+TGG - chr8.3:16157128-16157147 None:intergenic 20.0%
! AACACTAAGAAATTAGGATT+TGG + chr8.3:16157309-16157328 MS.gene033171:intron 25.0%
! AAGTTAGGGATATCTAAATT+TGG + chr8.3:16156554-16156573 MS.gene033171:intron 25.0%
! CAAGATCAAATAAATTCCAA+CGG + chr8.3:16157416-16157435 MS.gene033171:CDS 25.0%
! GAAATAGCAATTTACCAAAA+AGG - chr8.3:16156480-16156499 None:intergenic 25.0%
! GTAAACAACACTAAGAAATT+AGG + chr8.3:16157303-16157322 MS.gene033171:intron 25.0%
! TACCTGAATTGATAAGTATA+AGG - chr8.3:16157286-16157305 None:intergenic 25.0%
! TCTTCTGTAATCTTCTTTAT+GGG + chr8.3:16157100-16157119 MS.gene033171:CDS 25.0%
! TGATAAACACAATGAAGTTA+GGG + chr8.3:16156540-16156559 MS.gene033171:intron 25.0%
! TTCCTTATACTTATCAATTC+AGG + chr8.3:16157281-16157300 MS.gene033171:CDS 25.0%
! TTGATAAACACAATGAAGTT+AGG + chr8.3:16156539-16156558 MS.gene033171:intron 25.0%
! TTGGAATTTATTTGATCTTG+CGG - chr8.3:16157416-16157435 None:intergenic 25.0%
!! AAGTTTAGAATTCATTGTCT+TGG - chr8.3:16157263-16157282 None:intergenic 25.0%
!! TTTTAGATTTGACAGTGATA+TGG - chr8.3:16158072-16158091 None:intergenic 25.0%
ACTAAGAAATTAGGATTTGG+TGG + chr8.3:16157312-16157331 MS.gene033171:intron 30.0%
AGTAAGATAGACCAATAGAT+TGG - chr8.3:16156312-16156331 None:intergenic 30.0%
ATTTGAATGATGAATGCATC+AGG - chr8.3:16156502-16156521 None:intergenic 30.0%
CAATCTGAAAAAGATGGTAA+TGG + chr8.3:16158259-16158278 MS.gene033171:CDS 30.0%
CTTCTGTAATCTTCTTTATG+GGG + chr8.3:16157101-16157120 MS.gene033171:CDS 30.0%
GTACATAGTTGAATAGTGAA+GGG - chr8.3:16157237-16157256 None:intergenic 30.0%
GTCTTCTGTAATCTTCTTTA+TGG + chr8.3:16157099-16157118 MS.gene033171:CDS 30.0%
TATGTGAAAGTTAAACCAAG+TGG + chr8.3:16157133-16157152 MS.gene033171:CDS 30.0%
TCTTACTACAGTATTCAACT+TGG + chr8.3:16156325-16156344 MS.gene033171:CDS 30.0%
TGGAATTTATTTGATCTTGC+GGG - chr8.3:16157415-16157434 None:intergenic 30.0%
TTAGAAGTGGAATCAAGAAA+AGG + chr8.3:16157845-16157864 MS.gene033171:CDS 30.0%
TTCTGTAATCTTCTTTATGG+GGG + chr8.3:16157102-16157121 MS.gene033171:CDS 30.0%
TTGCTGAAGAATGAAAATAG+CGG + chr8.3:16156088-16156107 MS.gene033171:CDS 30.0%
TTTCTTGATTCCACTTCTAA+GGG - chr8.3:16157845-16157864 None:intergenic 30.0%
! ATCACTGTCAAATCTAAAAC+CGG + chr8.3:16158073-16158092 MS.gene033171:CDS 30.0%
! GATTCATTTTCATGAATGAC+AGG + chr8.3:16156245-16156264 MS.gene033171:intron 30.0%
! GTGTTTTCTAATTCTTCACA+TGG - chr8.3:16156797-16156816 None:intergenic 30.0%
! TTTTCTTGATTCCACTTCTA+AGG - chr8.3:16157846-16157865 None:intergenic 30.0%
!! AATGAGATTTTTGAGAAGCT+TGG + chr8.3:16156269-16156288 MS.gene033171:CDS 30.0%
AACACAGAATCTGGGAAAAA+GGG + chr8.3:16156941-16156960 MS.gene033171:CDS 35.0%
AACTTGCACTATGCTAGTTA+TGG - chr8.3:16157164-16157183 None:intergenic 35.0%
ACACTAAAATAGTGTGCTGT+TGG - chr8.3:16157556-16157575 None:intergenic 35.0%
ACCAACTTTGCAACATTGAT+AGG + chr8.3:16156392-16156411 MS.gene033171:CDS 35.0%
ACTTGCACTATGCTAGTTAT+GGG - chr8.3:16157163-16157182 None:intergenic 35.0%
ATCCCCTGTAGTTAATCTTA+GGG - chr8.3:16156123-16156142 None:intergenic 35.0%
ATTTACCAAAAAGGAAGCCA+CGG - chr8.3:16156471-16156490 None:intergenic 35.0%
CAAATGCTAAGTTACATGGT+CGG - chr8.3:16156901-16156920 None:intergenic 35.0%
GATCATCAGAAAGACATAGT+AGG - chr8.3:16157639-16157658 None:intergenic 35.0%
GGAATTTATTTGATCTTGCG+GGG - chr8.3:16157414-16157433 None:intergenic 35.0%
GGTACATAGTTGAATAGTGA+AGG - chr8.3:16157238-16157257 None:intergenic 35.0%
GTGGTATAGGTACAAAGAAA+CGG + chr8.3:16158201-16158220 MS.gene033171:CDS 35.0%
TAGATTTGACAGTGATATGG+TGG - chr8.3:16158069-16158088 None:intergenic 35.0%
TAGCATAGTGCAAGTTATTG+TGG + chr8.3:16157168-16157187 MS.gene033171:CDS 35.0%
TCAAGAAACCTGTCAATACA+AGG - chr8.3:16157374-16157393 None:intergenic 35.0%
TCCTATCAATGTTGCAAAGT+TGG - chr8.3:16156396-16156415 None:intergenic 35.0%
TCTAATTCTTCACATGGATG+TGG - chr8.3:16156791-16156810 None:intergenic 35.0%
TCTTACTAAACCCTTAGAAG+TGG + chr8.3:16157832-16157851 MS.gene033171:CDS 35.0%
TCTTGCTCACCTATAATGAA+GGG - chr8.3:16156157-16156176 None:intergenic 35.0%
TGTGTTGGGATTAAACTGAT+CGG - chr8.3:16156927-16156946 None:intergenic 35.0%
TTAATCCCAACACAGAATCT+GGG + chr8.3:16156933-16156952 MS.gene033171:CDS 35.0%
TTAGAATTCATTGTCTTGGC+AGG - chr8.3:16157259-16157278 None:intergenic 35.0%
TTGTGGTTGCAACAAAGAAA+AGG + chr8.3:16157185-16157204 MS.gene033171:CDS 35.0%
TTTAATCCCAACACAGAATC+TGG + chr8.3:16156932-16156951 MS.gene033171:CDS 35.0%
! AACAACTTTTCGGTCGTAAA+TGG - chr8.3:16157681-16157700 None:intergenic 35.0%
! AATGAAAATAGCGGAGATGA+TGG + chr8.3:16156097-16156116 MS.gene033171:CDS 35.0%
! ACAACTTTTCGGTCGTAAAT+GGG - chr8.3:16157680-16157699 None:intergenic 35.0%
! GGAGTAAAGGAACAACTTTT+CGG - chr8.3:16157691-16157710 None:intergenic 35.0%
! GGTTTAGGATTATTGATGGT+AGG + chr8.3:16156863-16156882 MS.gene033171:CDS 35.0%
! TCACTGTCAAATCTAAAACC+GGG + chr8.3:16158074-16158093 MS.gene033171:CDS 35.0%
! TTTTTCCCAGATTCTGTGTT+GGG - chr8.3:16156941-16156960 None:intergenic 35.0%
!! ACAGTTCTAAAGACTGGTTT+AGG + chr8.3:16156848-16156867 MS.gene033171:CDS 35.0%
!! CAAATGACAGTTCTAAAGAC+TGG + chr8.3:16156842-16156861 MS.gene033171:CDS 35.0%
!! GACTGGTTTAGGATTATTGA+TGG + chr8.3:16156859-16156878 MS.gene033171:CDS 35.0%
!!! ATGGGCATTGGCATTTTTTT+GGG + chr8.3:16157755-16157774 MS.gene033171:CDS 35.0%
AAAAACGGCTGAAACCCATA+TGG - chr8.3:16157516-16157535 None:intergenic 40.0%
AAAACGGCTGAAACCCATAT+GGG - chr8.3:16157515-16157534 None:intergenic 40.0%
AAGGTCATGCCCTTCATTAT+AGG + chr8.3:16156145-16156164 MS.gene033171:CDS 40.0%
AATGACAAATGGTGAGACTG+TGG + chr8.3:16156048-16156067 MS.gene033171:CDS 40.0%
ACACAGAATCTGGGAAAAAG+GGG + chr8.3:16156942-16156961 MS.gene033171:CDS 40.0%
ACATACAGTCAAATGTGAGC+TGG + chr8.3:16157038-16157057 MS.gene033171:CDS 40.0%
ATAGGTGAGCAAGACTTCAA+CGG + chr8.3:16156163-16156182 MS.gene033171:intron 40.0%
ATGGCCCTAAGATTAACTAC+AGG + chr8.3:16156116-16156135 MS.gene033171:CDS 40.0%
CAACACAGAATCTGGGAAAA+AGG + chr8.3:16156940-16156959 MS.gene033171:CDS 40.0%
CAGAGAATCACTCGAAAAGA+GGG + chr8.3:16157710-16157729 MS.gene033171:CDS 40.0%
CAGTCTCACCATTTGTCATT+TGG - chr8.3:16156048-16156067 None:intergenic 40.0%
CATACAGTCAAATGTGAGCT+GGG + chr8.3:16157039-16157058 MS.gene033171:CDS 40.0%
CATCCCCTGTAGTTAATCTT+AGG - chr8.3:16156124-16156143 None:intergenic 40.0%
CGACCATGTAACTTAGCATT+TGG + chr8.3:16156899-16156918 MS.gene033171:CDS 40.0%
CGGCACTTTATCCAATCTAT+TGG + chr8.3:16156298-16156317 MS.gene033171:CDS 40.0%
CTAAGATTAACTACAGGGGA+TGG + chr8.3:16156122-16156141 MS.gene033171:CDS 40.0%
GCTCCAAATGCTAAGTTACA+TGG - chr8.3:16156905-16156924 None:intergenic 40.0%
GGTGCAATTTCATCAATGTC+AGG + chr8.3:16157866-16157885 MS.gene033171:CDS 40.0%
GTATTACAAGCAAACCCTGA+AGG - chr8.3:16156739-16156758 None:intergenic 40.0%
GTCTTGCTCACCTATAATGA+AGG - chr8.3:16156158-16156177 None:intergenic 40.0%
TGACAGGTTTCTTGACAAAG+CGG + chr8.3:16157379-16157398 MS.gene033171:intron 40.0%
TGATGATCAGTGTGGCAATT+TGG + chr8.3:16157651-16157670 MS.gene033171:CDS 40.0%
TGCAAACTGCATAGATTCCA+GGG - chr8.3:16157455-16157474 None:intergenic 40.0%
TGGCCCTAAGATTAACTACA+GGG + chr8.3:16156117-16156136 MS.gene033171:CDS 40.0%
TGTCTTGTAGCGACCAAAAA+AGG - chr8.3:16156435-16156454 None:intergenic 40.0%
TGTCTTTCTGATGATCAGTG+TGG + chr8.3:16157643-16157662 MS.gene033171:CDS 40.0%
TGTTATGTGCACAGTGGTAT+AGG + chr8.3:16158188-16158207 MS.gene033171:CDS 40.0%
TTAGAAAACACCACATGCCA+AGG + chr8.3:16156806-16156825 MS.gene033171:CDS 40.0%
TTTCATCAATGTCAGGTCTG+TGG + chr8.3:16157873-16157892 MS.gene033171:CDS 40.0%
! AAAGGATGCCTTGTATTGAC+AGG + chr8.3:16157363-16157382 MS.gene033171:intron 40.0%
! CTTTTTCCCAGATTCTGTGT+TGG - chr8.3:16156942-16156961 None:intergenic 40.0%
! TAGTAAGAGCCATAGTTCTG+CGG - chr8.3:16157820-16157839 None:intergenic 40.0%
! TCAAATCTAAAACCGGGAGT+TGG + chr8.3:16158080-16158099 MS.gene033171:CDS 40.0%
! TTTTATCTGACAGGCGCATT+GGG + chr8.3:16157585-16157604 MS.gene033171:CDS 40.0%
! TTTTCCTCCGATGCCTTTTT+TGG + chr8.3:16156419-16156438 MS.gene033171:CDS 40.0%
!! GTTGAGAGTGTTACCCATAT+GGG + chr8.3:16157499-16157518 MS.gene033171:CDS 40.0%
!! TAGATTGGATAAAGTGCCGA+TGG - chr8.3:16156297-16156316 None:intergenic 40.0%
!! TGTTGAGAGTGTTACCCATA+TGG + chr8.3:16157498-16157517 MS.gene033171:CDS 40.0%
!!! GATGGGCATTGGCATTTTTT+TGG + chr8.3:16157754-16157773 MS.gene033171:CDS 40.0%
AAGACATAGTAGGATGCTCC+TGG - chr8.3:16157629-16157648 None:intergenic 45.0%
AGAATCACTCGAAAAGAGGG+TGG + chr8.3:16157713-16157732 MS.gene033171:CDS 45.0%
AGACATAGTAGGATGCTCCT+GGG - chr8.3:16157628-16157647 None:intergenic 45.0%
AGATTTCCCTGCTTCCTTCA+GGG + chr8.3:16156722-16156741 MS.gene033171:intron 45.0%
ATCACACTCCTTCAGAGGAT+GGG + chr8.3:16157737-16157756 MS.gene033171:CDS 45.0%
CAAAGCAAGTTCATGATCCC+AGG + chr8.3:16157608-16157627 MS.gene033171:CDS 45.0%
CAGGGAAATCTAGGAATCAG+AGG - chr8.3:16156713-16156732 None:intergenic 45.0%
CATGAATGCTTCAGCAAGTC+CGG - chr8.3:16157921-16157940 None:intergenic 45.0%
CCAGAGAATCACTCGAAAAG+AGG + chr8.3:16157709-16157728 MS.gene033171:CDS 45.0%
CTAGTTATGGGACTACCACT+TGG - chr8.3:16157151-16157170 None:intergenic 45.0%
CTGCAAACTGCATAGATTCC+AGG - chr8.3:16157456-16157475 None:intergenic 45.0%
GATTAACTACAGGGGATGGA+AGG + chr8.3:16156126-16156145 MS.gene033171:CDS 45.0%
GCAATGCTTCTCATGTTCTC+AGG - chr8.3:16157980-16157999 None:intergenic 45.0%
GCTTTGTGTTATGTGCACAG+TGG + chr8.3:16158182-16158201 MS.gene033171:CDS 45.0%
GGCCCTAAGATTAACTACAG+GGG + chr8.3:16156118-16156137 MS.gene033171:CDS 45.0%
TAGATTTCCCTGCTTCCTTC+AGG + chr8.3:16156721-16156740 MS.gene033171:intron 45.0%
TCTATGCAGTTTGCAGCAAG+TGG + chr8.3:16157460-16157479 MS.gene033171:CDS 45.0%
TGAAGGAAGCAGGGAAATCT+AGG - chr8.3:16156722-16156741 None:intergenic 45.0%
TGAGACTGTGGAGAATGAAG+AGG + chr8.3:16156060-16156079 MS.gene033171:CDS 45.0%
TGCAGGATCTCTCTACTATG+CGG + chr8.3:16157997-16158016 MS.gene033171:CDS 45.0%
TTTGAGAAGCTTGGAGCCAT+CGG + chr8.3:16156278-16156297 MS.gene033171:CDS 45.0%
! AACTGTCATTTGCCACTCTG+TGG - chr8.3:16156834-16156853 None:intergenic 45.0%
! ACTGTCATTTGCCACTCTGT+GGG - chr8.3:16156833-16156852 None:intergenic 45.0%
! CAAATAACTTGCCCCTGCAT+GGG - chr8.3:16158023-16158042 None:intergenic 45.0%
! CTTTTATCTGACAGGCGCAT+TGG + chr8.3:16157584-16157603 MS.gene033171:CDS 45.0%
! GTAGCGACCAAAAAAGGCAT+CGG - chr8.3:16156429-16156448 None:intergenic 45.0%
! TATTGATGGTAGGAGCTGCA+GGG + chr8.3:16156873-16156892 MS.gene033171:CDS 45.0%
! TCAAATAACTTGCCCCTGCA+TGG - chr8.3:16158024-16158043 None:intergenic 45.0%
! TCCAAGCGCTTTTATCTGAC+AGG + chr8.3:16157576-16157595 MS.gene033171:CDS 45.0%
! TTATTGATGGTAGGAGCTGC+AGG + chr8.3:16156872-16156891 MS.gene033171:CDS 45.0%
!! CGAGTGATTCTCTGGAGTAA+AGG - chr8.3:16157704-16157723 None:intergenic 45.0%
!! GACAAAAGCATCAAAGCTGC+AGG - chr8.3:16157082-16157101 None:intergenic 45.0%
!! GAGAACATGAGAAGCATTGC+AGG + chr8.3:16157980-16157999 MS.gene033171:CDS 45.0%
!!! CCTCTTTTCGAGTGATTCTC+TGG - chr8.3:16157712-16157731 None:intergenic 45.0%
AAGCAAACCCTGAAGGAAGC+AGG - chr8.3:16156732-16156751 None:intergenic 50.0%
AGCAAACCCTGAAGGAAGCA+GGG - chr8.3:16156731-16156750 None:intergenic 50.0%
CAGTTTGCAGCAAGTGGAAG+AGG + chr8.3:16157466-16157485 MS.gene033171:CDS 50.0%
CATCACACTCCTTCAGAGGA+TGG + chr8.3:16157736-16157755 MS.gene033171:CDS 50.0%
GAAAAGGAAGCTGAAGCTCG+CGG + chr8.3:16157201-16157220 MS.gene033171:CDS 50.0%
GGATCAGCAGCTTCTTCACT+TGG + chr8.3:16156963-16156982 MS.gene033171:CDS 50.0%
GGATCTGAACAAGGGGAGAT+TGG + chr8.3:16158111-16158130 MS.gene033171:CDS 50.0%
TCAAATGTGAGCTGGGCTGT+CGG + chr8.3:16157046-16157065 MS.gene033171:CDS 50.0%
TCTGCGGCGATCTTCAACTA+TGG - chr8.3:16157804-16157823 None:intergenic 50.0%
TGAAGATCGCCGCAGAACTA+TGG + chr8.3:16157808-16157827 MS.gene033171:CDS 50.0%
TTGCCGGAGGATCTGAACAA+GGG + chr8.3:16158103-16158122 MS.gene033171:CDS 50.0%
! TAAAACCGGGAGTTGGTTGC+CGG + chr8.3:16158087-16158106 MS.gene033171:CDS 50.0%
!! GCCTGTCAGATAAAAGCGCT+TGG - chr8.3:16157580-16157599 None:intergenic 50.0%
ACGGATCTGCTTCTGATCCC+TGG + chr8.3:16157435-16157454 MS.gene033171:CDS 55.0%
CTCCCCTTGTTCAGATCCTC+CGG - chr8.3:16158109-16158128 None:intergenic 55.0%
CTCCTTCAGAGGATGGGCAT+TGG + chr8.3:16157743-16157762 MS.gene033171:CDS 55.0%
GACACTGTCATTCTGCACCG+TGG + chr8.3:16156451-16156470 MS.gene033171:CDS 55.0%
GGGATCAGAAGCAGATCCGT+TGG - chr8.3:16157435-16157454 None:intergenic 55.0%
GTGGCATCACACTCCTTCAG+AGG + chr8.3:16157732-16157751 MS.gene033171:CDS 55.0%
GTTGCCGGAGGATCTGAACA+AGG + chr8.3:16158102-16158121 MS.gene033171:CDS 55.0%
TCTACTATGCGGCCCATGCA+GGG + chr8.3:16158008-16158027 MS.gene033171:CDS 55.0%
TGCCAATGCCCATCCTCTGA+AGG - chr8.3:16157748-16157767 None:intergenic 55.0%
TGCCGGAGGATCTGAACAAG+GGG + chr8.3:16158104-16158123 MS.gene033171:CDS 55.0%
TTTGCCACTCTGTGGGTCCT+TGG - chr8.3:16156826-16156845 None:intergenic 55.0%
! CTGCACCGTGGCTTCCTTTT+TGG + chr8.3:16156463-16156482 MS.gene033171:CDS 55.0%
! GCTGATTCCTCAGCTGGCAT+TGG + chr8.3:16157895-16157914 MS.gene033171:CDS 55.0%
! TCTGTGGCTGATTCCTCAGC+TGG + chr8.3:16157889-16157908 MS.gene033171:CDS 55.0%
!! ATTCCTCAGCTGGCATTGGC+CGG + chr8.3:16157899-16157918 MS.gene033171:CDS 55.0%
!! GCGACCAAAAAAGGCATCGG+AGG - chr8.3:16156426-16156445 None:intergenic 55.0%
ATCCTCCGGCAACCAACTCC+CGG - chr8.3:16158095-16158114 None:intergenic 60.0%
CATGCCAAGGACCCACAGAG+TGG + chr8.3:16156819-16156838 MS.gene033171:CDS 60.0%
CTACTATGCGGCCCATGCAG+GGG + chr8.3:16158009-16158028 MS.gene033171:CDS 60.0%
CTCTACTATGCGGCCCATGC+AGG + chr8.3:16158007-16158026 MS.gene033171:CDS 60.0%
CTCTGTGGGTCCTTGGCATG+TGG - chr8.3:16156819-16156838 None:intergenic 60.0%
! TGTGAGCTGGGCTGTCGGTT+TGG + chr8.3:16157051-16157070 MS.gene033171:CDS 60.0%
!! GTGAGCTGGGCTGTCGGTTT+GGG + chr8.3:16157052-16157071 MS.gene033171:CDS 60.0%
AGTCCGGCCAATGCCAGCTG+AGG - chr8.3:16157905-16157924 None:intergenic 65.0%
! AACCGGGAGTTGGTTGCCGG+AGG + chr8.3:16158090-16158109 MS.gene033171:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 16156040 16158291 16156040 ID=MS.gene033171
chr8.3 mRNA 16156040 16158291 16156040 ID=MS.gene033171.t1;Parent=MS.gene033171
chr8.3 exon 16156040 16156166 16156040 ID=MS.gene033171.t1.exon1;Parent=MS.gene033171.t1
chr8.3 CDS 16156040 16156166 16156040 ID=cds.MS.gene033171.t1;Parent=MS.gene033171.t1
chr8.3 exon 16156267 16156484 16156267 ID=MS.gene033171.t1.exon2;Parent=MS.gene033171.t1
chr8.3 CDS 16156267 16156484 16156267 ID=cds.MS.gene033171.t1;Parent=MS.gene033171.t1
chr8.3 exon 16156743 16157302 16156743 ID=MS.gene033171.t1.exon3;Parent=MS.gene033171.t1
chr8.3 CDS 16156743 16157302 16156743 ID=cds.MS.gene033171.t1;Parent=MS.gene033171.t1
chr8.3 exon 16157385 16158291 16157385 ID=MS.gene033171.t1.exon4;Parent=MS.gene033171.t1
chr8.3 CDS 16157385 16158291 16157385 ID=cds.MS.gene033171.t1;Parent=MS.gene033171.t1
Gene Sequence

>MS.gene033171

ATGAACCAAATGACAAATGGTGAGACTGTGGAGAATGAAGAGGTAAGTTTGCTGAAGAATGAAAATAGCGGAGATGATGGCCCTAAGATTAACTACAGGGGATGGAAGGTCATGCCCTTCATTATAGGTGAGCAAGACTTCAACGGCAGAATATTTTGTTTTTACTTGCTTCATTCTCGTCTGTTAATTTTCTTAATTCTTGAGTGATTCATTTTCATGAATGACAGGAAATGAGATTTTTGAGAAGCTTGGAGCCATCGGCACTTTATCCAATCTATTGGTCTATCTTACTACAGTATTCAACTTGGAAAACATCGCAGCTACAAATATTATCAACATCTTTAACGGAAGTACCAACTTTGCAACATTGATAGGAGCTTTTTCCTCCGATGCCTTTTTTGGTCGCTACAAGACACTGTCATTCTGCACCGTGGCTTCCTTTTTGGTAAATTGCTATTTCCTGATGCATTCATCATTCAAATCCATTCCATTTTTTTTGTTGATAAACACAATGAAGTTAGGGATATCTAAATTTGGATAATACCAATGATATTGACAAGTATTAAACAAGATTTGCGATCATCGTCAATAGATGTAATTCCATTTTAAAATGCATAACATAAAACTATCAATTTTTGTACTTTGACAAGCTTAGCTCATTTTAGTTGTGCCTCTGATTCCTAGATTTCCCTGCTTCCTTCAGGGTTTGCTTGTAATACAACTAACAGCAGCAGTCGAGAAGCTGCATCCACATCCATGTGAAGAATTAGAAAACACCACATGCCAAGGACCCACAGAGTGGCAAATGACAGTTCTAAAGACTGGTTTAGGATTATTGATGGTAGGAGCTGCAGGGATCCGACCATGTAACTTAGCATTTGGAGCCGATCAGTTTAATCCCAACACAGAATCTGGGAAAAAGGGGATCAGCAGCTTCTTCACTTGGTACTATTTCACTTTCACTCTTGCTCAGATGATATCCTTAACAATTATTGTCTACATACAGTCAAATGTGAGCTGGGCTGTCGGTTTGGGAATTCCTGCAGCTTTGATGCTTTTGTCTTCTGTAATCTTCTTTATGGGGGCCAAATTGTATGTGAAAGTTAAACCAAGTGGTAGTCCCATAACTAGCATAGTGCAAGTTATTGTGGTTGCAACAAAGAAAAGGAAGCTGAAGCTCGCGGAATATCTATACCCTTCACTATTCAACTATGTACCTGCCAAGACAATGAATTCTAAACTTCCTTATACTTATCAATTCAGGTAAACAACACTAAGAAATTAGGATTTGGTGGTAGATATAATTATTTTCAATAGTGGTTTAAAGGATGCCTTGTATTGACAGGTTTCTTGACAAAGCGGCAATCATGACCCCGCAAGATCAAATAAATTCCAACGGATCTGCTTCTGATCCCTGGAATCTATGCAGTTTGCAGCAAGTGGAAGAGGTCAAATGCTTGTTGAGAGTGTTACCCATATGGGTTTCAGCCGTTTTTTACTATGTTGTTATCGTCCAACAGCACACTATTTTAGTGTTCCAAGCGCTTTTATCTGACAGGCGCATTGGGCAAAGCAAGTTCATGATCCCAGGAGCATCCTACTATGTCTTTCTGATGATCAGTGTGGCAATTTGGTTGCCCATTTACGACCGAAAAGTTGTTCCTTTACTCCAGAGAATCACTCGAAAAGAGGGTGGCATCACACTCCTTCAGAGGATGGGCATTGGCATTTTTTTGGGTATACTCAGCATGCTAGTATCTGCCATAGTTGAAGATCGCCGCAGAACTATGGCTCTTACTAAACCCTTAGAAGTGGAATCAAGAAAAGGTGCAATTTCATCAATGTCAGGTCTGTGGCTGATTCCTCAGCTGGCATTGGCCGGACTTGCTGAAGCATTCATGTCTGTTGCACAGATTGAATTTTACTATAAACAGTTTCCTGAGAACATGAGAAGCATTGCAGGATCTCTCTACTATGCGGCCCATGCAGGGGCAAGTTATTTGAGTAGTATGCTGATTTCATCTATCCACCATATCACTGTCAAATCTAAAACCGGGAGTTGGTTGCCGGAGGATCTGAACAAGGGGAGATTGGATAACTTCTATCTCATCATTGCTGCTATAGAAATTGTAAATTTAGGCTGCTTTGTGTTATGTGCACAGTGGTATAGGTACAAAGAAACGGAAAACAGTTCAATCGAACTTGATAAAGTGATAAAACAATCTGAAAAAGATGGTAATGGTGTGAAATGA

Protein sequence

>MS.gene033171.t1

MNQMTNGETVENEEVSLLKNENSGDDGPKINYRGWKVMPFIIGNEIFEKLGAIGTLSNLLVYLTTVFNLENIAATNIINIFNGSTNFATLIGAFSSDAFFGRYKTLSFCTVASFLGLLVIQLTAAVEKLHPHPCEELENTTCQGPTEWQMTVLKTGLGLLMVGAAGIRPCNLAFGADQFNPNTESGKKGISSFFTWYYFTFTLAQMISLTIIVYIQSNVSWAVGLGIPAALMLLSSVIFFMGAKLYVKVKPSGSPITSIVQVIVVATKKRKLKLAEYLYPSLFNYVPAKTMNSKLPYTYQFRFLDKAAIMTPQDQINSNGSASDPWNLCSLQQVEEVKCLLRVLPIWVSAVFYYVVIVQQHTILVFQALLSDRRIGQSKFMIPGASYYVFLMISVAIWLPIYDRKVVPLLQRITRKEGGITLLQRMGIGIFLGILSMLVSAIVEDRRRTMALTKPLEVESRKGAISSMSGLWLIPQLALAGLAEAFMSVAQIEFYYKQFPENMRSIAGSLYYAAHAGASYLSSMLISSIHHITVKSKTGSWLPEDLNKGRLDNFYLIIAAIEIVNLGCFVLCAQWYRYKETENSSIELDKVIKQSEKDGNGVK