Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34999.t1 | RHN42292.1 | 96.2 | 585 | 22 | 0 | 1 | 585 | 1 | 585 | 0.00E+00 | 1125.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34999.t1 | P46032 | 73.8 | 585 | 152 | 1 | 1 | 585 | 1 | 584 | 3.7e-257 | 888.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34999.t1 | A0A396GMH3 | 96.2 | 585 | 22 | 0 | 1 | 585 | 1 | 585 | 0.0e+00 | 1125.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34999.t1 | MTR_7g067010 | 63.393 | 560 | 200 | 5 | 25 | 583 | 7 | 562 | 0.0 | 735 |
MS.gene34999.t1 | MTR_3g462710 | 62.367 | 566 | 208 | 4 | 20 | 583 | 2 | 564 | 0.0 | 728 |
MS.gene34999.t1 | MTR_4g015080 | 61.092 | 568 | 216 | 5 | 19 | 585 | 11 | 574 | 0.0 | 723 |
MS.gene34999.t1 | MTR_3g462710 | 61.790 | 458 | 170 | 4 | 128 | 583 | 1 | 455 | 0.0 | 569 |
MS.gene34999.t1 | MTR_7g098200 | 46.303 | 568 | 293 | 3 | 15 | 577 | 2 | 562 | 0.0 | 551 |
MS.gene34999.t1 | MTR_7g098200 | 45.775 | 568 | 286 | 4 | 15 | 577 | 2 | 552 | 0.0 | 538 |
MS.gene34999.t1 | MTR_7g098160 | 46.181 | 563 | 291 | 4 | 22 | 579 | 13 | 568 | 0.0 | 536 |
MS.gene34999.t1 | MTR_7g098180 | 46.422 | 573 | 290 | 6 | 11 | 577 | 4 | 565 | 0.0 | 535 |
MS.gene34999.t1 | MTR_7g098040 | 45.391 | 575 | 300 | 5 | 10 | 579 | 4 | 569 | 0.0 | 525 |
MS.gene34999.t1 | MTR_7g098090 | 45.250 | 579 | 298 | 6 | 11 | 579 | 4 | 573 | 3.25e-180 | 522 |
MS.gene34999.t1 | MTR_1g075440 | 45.745 | 564 | 290 | 5 | 11 | 569 | 1 | 553 | 4.15e-180 | 521 |
MS.gene34999.t1 | MTR_3g112460 | 46.786 | 560 | 283 | 5 | 28 | 585 | 9 | 555 | 3.13e-177 | 513 |
MS.gene34999.t1 | MTR_1g042310 | 44.050 | 563 | 307 | 3 | 20 | 579 | 4 | 561 | 1.80e-175 | 509 |
MS.gene34999.t1 | MTR_7g098220 | 45.709 | 571 | 298 | 4 | 14 | 579 | 2 | 565 | 3.50e-175 | 509 |
MS.gene34999.t1 | MTR_3g112470 | 46.607 | 560 | 284 | 5 | 28 | 585 | 9 | 555 | 1.53e-174 | 506 |
MS.gene34999.t1 | MTR_1g041835 | 44.186 | 559 | 303 | 2 | 24 | 579 | 9 | 561 | 2.00e-172 | 501 |
MS.gene34999.t1 | MTR_1g041815 | 44.544 | 559 | 301 | 2 | 24 | 579 | 9 | 561 | 2.46e-172 | 502 |
MS.gene34999.t1 | MTR_3g072300 | 44.190 | 568 | 310 | 4 | 20 | 585 | 2 | 564 | 1.12e-170 | 497 |
MS.gene34999.t1 | MTR_7g098230 | 44.485 | 544 | 290 | 4 | 39 | 577 | 23 | 559 | 2.20e-169 | 494 |
MS.gene34999.t1 | MTR_1g041875 | 43.911 | 542 | 289 | 3 | 24 | 562 | 11 | 540 | 6.57e-169 | 493 |
MS.gene34999.t1 | MTR_5g055000 | 45.073 | 548 | 295 | 5 | 40 | 583 | 16 | 561 | 4.21e-168 | 491 |
MS.gene34999.t1 | MTR_3g112450 | 45.989 | 561 | 286 | 6 | 28 | 584 | 9 | 556 | 6.13e-167 | 487 |
MS.gene34999.t1 | MTR_5g014150 | 43.728 | 574 | 316 | 5 | 12 | 580 | 15 | 586 | 7.36e-167 | 488 |
MS.gene34999.t1 | MTR_4g098800 | 43.034 | 567 | 312 | 4 | 20 | 581 | 14 | 574 | 5.09e-163 | 478 |
MS.gene34999.t1 | MTR_4g098800 | 42.882 | 576 | 315 | 5 | 14 | 581 | 70 | 639 | 2.28e-162 | 478 |
MS.gene34999.t1 | MTR_7g010820 | 44.248 | 565 | 306 | 5 | 26 | 583 | 10 | 572 | 1.06e-160 | 472 |
MS.gene34999.t1 | MTR_1g042310 | 43.893 | 524 | 286 | 3 | 59 | 579 | 6 | 524 | 3.94e-160 | 469 |
MS.gene34999.t1 | MTR_1g116930 | 42.629 | 563 | 312 | 6 | 20 | 580 | 2 | 555 | 9.95e-160 | 469 |
MS.gene34999.t1 | MTR_7g005930 | 42.989 | 542 | 299 | 5 | 41 | 580 | 34 | 567 | 4.59e-159 | 468 |
MS.gene34999.t1 | MTR_3g069420 | 42.632 | 570 | 312 | 8 | 18 | 582 | 10 | 569 | 6.40e-159 | 468 |
MS.gene34999.t1 | MTR_3g005010 | 44.621 | 567 | 273 | 7 | 26 | 585 | 14 | 546 | 1.62e-158 | 465 |
MS.gene34999.t1 | MTR_1g042310 | 43.678 | 522 | 286 | 3 | 61 | 579 | 1 | 517 | 1.83e-158 | 464 |
MS.gene34999.t1 | MTR_7g098220 | 45.627 | 526 | 274 | 4 | 59 | 579 | 3 | 521 | 7.02e-158 | 463 |
MS.gene34999.t1 | MTR_7g088825 | 41.476 | 569 | 322 | 8 | 20 | 582 | 2 | 565 | 3.61e-157 | 463 |
MS.gene34999.t1 | MTR_3g069500 | 41.901 | 568 | 309 | 7 | 18 | 582 | 11 | 560 | 9.35e-156 | 459 |
MS.gene34999.t1 | MTR_7g088790 | 41.607 | 560 | 320 | 6 | 28 | 582 | 15 | 572 | 2.72e-155 | 459 |
MS.gene34999.t1 | MTR_7g013270 | 42.032 | 571 | 316 | 7 | 15 | 580 | 64 | 624 | 7.13e-155 | 459 |
MS.gene34999.t1 | MTR_4g033325 | 44.065 | 556 | 281 | 8 | 28 | 579 | 17 | 546 | 1.14e-154 | 455 |
MS.gene34999.t1 | MTR_5g012270 | 42.637 | 584 | 315 | 10 | 14 | 585 | 2 | 577 | 1.19e-154 | 456 |
MS.gene34999.t1 | MTR_1g041885 | 43.307 | 508 | 273 | 3 | 61 | 565 | 1 | 496 | 2.52e-154 | 454 |
MS.gene34999.t1 | MTR_7g088820 | 41.316 | 547 | 312 | 7 | 31 | 572 | 16 | 558 | 5.38e-154 | 455 |
MS.gene34999.t1 | MTR_5g012290 | 43.525 | 556 | 307 | 4 | 32 | 582 | 17 | 570 | 4.50e-153 | 452 |
MS.gene34999.t1 | MTR_0294s0020 | 43.958 | 571 | 287 | 9 | 13 | 579 | 5 | 546 | 6.04e-152 | 448 |
MS.gene34999.t1 | MTR_7g065080 | 41.812 | 574 | 317 | 8 | 13 | 584 | 2 | 560 | 3.96e-151 | 447 |
MS.gene34999.t1 | MTR_3g069440 | 42.576 | 559 | 308 | 7 | 28 | 582 | 19 | 568 | 5.89e-150 | 444 |
MS.gene34999.t1 | MTR_4g019580 | 41.343 | 566 | 323 | 6 | 20 | 584 | 14 | 571 | 2.17e-149 | 443 |
MS.gene34999.t1 | MTR_4g033315 | 42.626 | 556 | 291 | 7 | 28 | 579 | 17 | 548 | 1.71e-148 | 439 |
MS.gene34999.t1 | MTR_4g033310 | 42.626 | 556 | 291 | 7 | 28 | 579 | 17 | 548 | 1.71e-148 | 439 |
MS.gene34999.t1 | MTR_7g098150 | 46.374 | 455 | 232 | 4 | 22 | 471 | 13 | 460 | 2.29e-147 | 434 |
MS.gene34999.t1 | MTR_4g101380 | 42.832 | 572 | 313 | 7 | 21 | 582 | 6 | 573 | 3.39e-146 | 435 |
MS.gene34999.t1 | MTR_4g033330 | 43.438 | 541 | 278 | 8 | 28 | 564 | 17 | 533 | 1.11e-144 | 429 |
MS.gene34999.t1 | MTR_4g114340 | 43.058 | 569 | 309 | 6 | 20 | 583 | 2 | 560 | 2.02e-142 | 424 |
MS.gene34999.t1 | MTR_7g088820 | 41.903 | 494 | 280 | 6 | 84 | 572 | 5 | 496 | 2.91e-140 | 417 |
MS.gene34999.t1 | MTR_5g085850 | 41.093 | 567 | 310 | 4 | 21 | 582 | 9 | 556 | 6.56e-140 | 419 |
MS.gene34999.t1 | MTR_7g006540 | 39.249 | 586 | 332 | 9 | 17 | 582 | 31 | 612 | 6.15e-139 | 418 |
MS.gene34999.t1 | MTR_8g038880 | 42.259 | 549 | 289 | 8 | 44 | 583 | 22 | 551 | 8.85e-138 | 412 |
MS.gene34999.t1 | MTR_5g038060 | 40.868 | 553 | 313 | 7 | 40 | 582 | 29 | 577 | 2.02e-136 | 410 |
MS.gene34999.t1 | MTR_7g098200 | 43.516 | 455 | 245 | 3 | 128 | 577 | 1 | 448 | 1.81e-135 | 404 |
MS.gene34999.t1 | MTR_4g033395 | 42.460 | 504 | 263 | 9 | 28 | 527 | 18 | 498 | 6.48e-135 | 402 |
MS.gene34999.t1 | MTR_3g014790 | 40.422 | 569 | 301 | 10 | 28 | 583 | 5 | 548 | 9.21e-135 | 404 |
MS.gene34999.t1 | MTR_4g033375 | 42.970 | 505 | 259 | 9 | 28 | 527 | 18 | 498 | 1.81e-134 | 402 |
MS.gene34999.t1 | MTR_4g107510 | 35.846 | 597 | 359 | 8 | 1 | 584 | 1 | 586 | 1.96e-131 | 397 |
MS.gene34999.t1 | MTR_2g017750 | 38.898 | 581 | 339 | 9 | 17 | 582 | 9 | 588 | 2.45e-131 | 397 |
MS.gene34999.t1 | MTR_4g107670 | 37.842 | 584 | 332 | 8 | 20 | 584 | 2 | 573 | 7.77e-131 | 395 |
MS.gene34999.t1 | MTR_8g087780 | 39.613 | 568 | 330 | 7 | 28 | 582 | 7 | 574 | 1.85e-130 | 394 |
MS.gene34999.t1 | MTR_8g469480 | 38.686 | 548 | 320 | 8 | 46 | 582 | 42 | 584 | 4.55e-129 | 391 |
MS.gene34999.t1 | MTR_4g107530 | 37.838 | 592 | 340 | 9 | 4 | 583 | 7 | 582 | 7.48e-129 | 390 |
MS.gene34999.t1 | MTR_8g469470 | 36.177 | 586 | 349 | 7 | 13 | 585 | 11 | 584 | 2.06e-128 | 389 |
MS.gene34999.t1 | MTR_2g005130 | 39.677 | 557 | 309 | 8 | 28 | 579 | 26 | 560 | 3.38e-127 | 386 |
MS.gene34999.t1 | MTR_3g100980 | 37.906 | 554 | 324 | 5 | 36 | 582 | 10 | 550 | 5.29e-126 | 382 |
MS.gene34999.t1 | MTR_4g107580 | 35.235 | 596 | 349 | 6 | 1 | 582 | 1 | 573 | 2.03e-125 | 382 |
MS.gene34999.t1 | MTR_7g088820 | 41.333 | 450 | 257 | 6 | 128 | 572 | 1 | 448 | 2.95e-124 | 375 |
MS.gene34999.t1 | MTR_8g103233 | 39.234 | 548 | 318 | 8 | 39 | 579 | 14 | 553 | 3.10e-123 | 375 |
MS.gene34999.t1 | MTR_8g469310 | 37.913 | 575 | 342 | 8 | 17 | 582 | 3 | 571 | 5.35e-123 | 375 |
MS.gene34999.t1 | MTR_7g065080 | 41.478 | 487 | 268 | 8 | 100 | 584 | 2 | 473 | 2.30e-122 | 370 |
MS.gene34999.t1 | MTR_5g038380 | 37.435 | 577 | 343 | 8 | 17 | 582 | 5 | 574 | 1.04e-121 | 372 |
MS.gene34999.t1 | MTR_3g100980 | 36.254 | 582 | 323 | 6 | 36 | 582 | 10 | 578 | 8.61e-121 | 370 |
MS.gene34999.t1 | MTR_4g033325 | 42.451 | 457 | 233 | 8 | 127 | 579 | 18 | 448 | 7.74e-119 | 360 |
MS.gene34999.t1 | MTR_8g087810 | 39.442 | 573 | 325 | 8 | 28 | 582 | 7 | 575 | 9.56e-119 | 364 |
MS.gene34999.t1 | MTR_5g038190 | 35.103 | 584 | 345 | 8 | 10 | 582 | 8 | 568 | 2.75e-117 | 360 |
MS.gene34999.t1 | MTR_4g033325 | 42.661 | 436 | 229 | 6 | 148 | 579 | 4 | 422 | 2.26e-116 | 353 |
MS.gene34999.t1 | MTR_1g085090 | 35.472 | 561 | 341 | 7 | 27 | 582 | 2 | 546 | 3.59e-116 | 358 |
MS.gene34999.t1 | MTR_4g033385 | 40.919 | 457 | 243 | 9 | 127 | 579 | 16 | 449 | 5.81e-115 | 350 |
MS.gene34999.t1 | MTR_7g111260 | 35.897 | 546 | 331 | 6 | 40 | 582 | 17 | 546 | 1.33e-114 | 353 |
MS.gene34999.t1 | MTR_1g026740 | 36.396 | 555 | 336 | 7 | 34 | 579 | 7 | 553 | 3.01e-112 | 347 |
MS.gene34999.t1 | MTR_2g101650 | 35.417 | 576 | 338 | 8 | 13 | 579 | 13 | 563 | 3.20e-112 | 347 |
MS.gene34999.t1 | MTR_2g101590 | 35.690 | 580 | 332 | 11 | 12 | 579 | 15 | 565 | 4.73e-112 | 348 |
MS.gene34999.t1 | MTR_1g009200 | 36.996 | 546 | 324 | 8 | 44 | 579 | 29 | 564 | 2.19e-111 | 345 |
MS.gene34999.t1 | MTR_4g123537 | 37.410 | 556 | 329 | 7 | 32 | 583 | 31 | 571 | 2.87e-111 | 345 |
MS.gene34999.t1 | MTR_1g026750 | 35.702 | 563 | 343 | 6 | 31 | 583 | 5 | 558 | 5.08e-111 | 343 |
MS.gene34999.t1 | MTR_2g101610 | 36.413 | 552 | 329 | 10 | 40 | 579 | 25 | 566 | 2.64e-110 | 344 |
MS.gene34999.t1 | MTR_4g024930 | 36.077 | 571 | 328 | 10 | 18 | 580 | 12 | 553 | 1.23e-107 | 335 |
MS.gene34999.t1 | MTR_2g101640 | 34.715 | 579 | 345 | 9 | 9 | 579 | 9 | 562 | 2.49e-105 | 331 |
MS.gene34999.t1 | MTR_7g098210 | 37.285 | 523 | 236 | 11 | 61 | 577 | 1 | 437 | 1.81e-104 | 322 |
MS.gene34999.t1 | MTR_4g107610 | 34.938 | 561 | 337 | 10 | 41 | 583 | 30 | 580 | 3.33e-104 | 327 |
MS.gene34999.t1 | MTR_1g026770 | 35.584 | 548 | 337 | 8 | 44 | 584 | 17 | 555 | 1.69e-103 | 324 |
MS.gene34999.t1 | MTR_4g011280 | 34.552 | 547 | 342 | 8 | 41 | 579 | 31 | 569 | 2.55e-102 | 322 |
MS.gene34999.t1 | MTR_7g064780 | 32.049 | 571 | 376 | 7 | 17 | 579 | 1 | 567 | 2.90e-100 | 316 |
MS.gene34999.t1 | MTR_2g101560 | 34.177 | 553 | 340 | 10 | 40 | 579 | 25 | 566 | 1.25e-99 | 316 |
MS.gene34999.t1 | MTR_1g057460 | 34.555 | 573 | 329 | 17 | 20 | 579 | 25 | 564 | 3.96e-99 | 313 |
MS.gene34999.t1 | MTR_6g008690 | 33.808 | 562 | 315 | 11 | 47 | 585 | 12 | 539 | 1.86e-93 | 297 |
MS.gene34999.t1 | MTR_1g057460 | 35.409 | 514 | 291 | 14 | 77 | 579 | 10 | 493 | 3.62e-92 | 292 |
MS.gene34999.t1 | MTR_7g064800 | 33.942 | 548 | 348 | 8 | 40 | 577 | 24 | 567 | 4.95e-91 | 292 |
MS.gene34999.t1 | MTR_0236s0050 | 34.517 | 507 | 305 | 10 | 77 | 579 | 10 | 493 | 1.33e-86 | 278 |
MS.gene34999.t1 | MTR_2g093640 | 30.182 | 550 | 344 | 9 | 44 | 580 | 23 | 545 | 1.42e-75 | 250 |
MS.gene34999.t1 | MTR_4g033310 | 43.478 | 276 | 147 | 3 | 306 | 579 | 216 | 484 | 1.60e-75 | 249 |
MS.gene34999.t1 | MTR_4g033310 | 48.901 | 182 | 84 | 2 | 28 | 209 | 17 | 189 | 4.95e-46 | 169 |
MS.gene34999.t1 | MTR_2g093160 | 31.193 | 545 | 345 | 10 | 44 | 580 | 23 | 545 | 1.82e-73 | 245 |
MS.gene34999.t1 | MTR_2g093180 | 30.702 | 570 | 353 | 11 | 28 | 580 | 2 | 546 | 6.80e-72 | 241 |
MS.gene34999.t1 | MTR_7g052600 | 29.663 | 563 | 355 | 9 | 19 | 579 | 2 | 525 | 7.15e-72 | 240 |
MS.gene34999.t1 | MTR_7g051880 | 29.783 | 554 | 348 | 9 | 28 | 579 | 11 | 525 | 4.46e-71 | 238 |
MS.gene34999.t1 | MTR_7g051830 | 29.422 | 554 | 350 | 8 | 28 | 579 | 11 | 525 | 8.30e-70 | 234 |
MS.gene34999.t1 | MTR_1g009170 | 32.506 | 403 | 210 | 11 | 167 | 561 | 9 | 357 | 3.85e-56 | 194 |
MS.gene34999.t1 | MTR_3g065350 | 39.634 | 164 | 93 | 1 | 351 | 514 | 1 | 158 | 6.90e-30 | 115 |
MS.gene34999.t1 | MTR_4g033390 | 46.988 | 83 | 44 | 0 | 497 | 579 | 30 | 112 | 1.61e-21 | 90.9 |
MS.gene34999.t1 | MTR_8g091265 | 37.069 | 116 | 69 | 4 | 312 | 423 | 3 | 118 | 1.12e-12 | 66.2 |
MS.gene34999.t1 | MTR_4g124330 | 31.405 | 121 | 60 | 2 | 144 | 264 | 8 | 105 | 2.36e-11 | 61.6 |
MS.gene34999.t1 | MTR_7g064160 | 27.500 | 120 | 81 | 1 | 17 | 136 | 4 | 117 | 3.88e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34999.t1 | AT2G02040 | 73.846 | 585 | 152 | 1 | 1 | 585 | 1 | 584 | 0.0 | 912 |
MS.gene34999.t1 | AT1G62200 | 63.087 | 596 | 200 | 4 | 1 | 584 | 2 | 589 | 0.0 | 772 |
MS.gene34999.t1 | AT1G62200 | 60.320 | 625 | 199 | 5 | 1 | 584 | 16 | 632 | 0.0 | 758 |
MS.gene34999.t1 | AT1G62200 | 60.320 | 625 | 199 | 5 | 1 | 584 | 2 | 618 | 0.0 | 757 |
MS.gene34999.t1 | AT3G54140 | 62.544 | 566 | 209 | 3 | 20 | 584 | 2 | 565 | 0.0 | 743 |
MS.gene34999.t1 | AT3G54140 | 62.544 | 566 | 209 | 3 | 20 | 584 | 2 | 565 | 0.0 | 743 |
MS.gene34999.t1 | AT5G01180 | 59.859 | 568 | 224 | 4 | 19 | 585 | 2 | 566 | 0.0 | 721 |
MS.gene34999.t1 | AT5G01180 | 59.859 | 568 | 224 | 4 | 19 | 585 | 2 | 566 | 0.0 | 721 |
MS.gene34999.t1 | AT5G01180 | 59.859 | 568 | 224 | 4 | 19 | 585 | 2 | 566 | 0.0 | 721 |
MS.gene34999.t1 | AT2G02020 | 60.751 | 586 | 187 | 7 | 1 | 584 | 1 | 545 | 0.0 | 716 |
MS.gene34999.t1 | AT2G02020 | 57.338 | 586 | 186 | 8 | 1 | 584 | 1 | 524 | 0.0 | 657 |
MS.gene34999.t1 | AT5G46050 | 44.444 | 549 | 292 | 5 | 19 | 562 | 4 | 544 | 8.54e-168 | 490 |
MS.gene34999.t1 | AT1G32450 | 42.660 | 579 | 321 | 7 | 11 | 580 | 6 | 582 | 7.07e-165 | 483 |
MS.gene34999.t1 | AT1G68570 | 45.167 | 569 | 305 | 6 | 19 | 582 | 2 | 568 | 4.83e-163 | 478 |
MS.gene34999.t1 | AT2G40460 | 43.186 | 565 | 308 | 4 | 20 | 582 | 2 | 555 | 3.80e-162 | 475 |
MS.gene34999.t1 | AT5G46040 | 43.278 | 543 | 295 | 5 | 25 | 562 | 10 | 544 | 2.10e-158 | 466 |
MS.gene34999.t1 | AT1G68570 | 46.442 | 534 | 281 | 5 | 54 | 582 | 5 | 538 | 2.18e-158 | 465 |
MS.gene34999.t1 | AT4G21680 | 42.660 | 579 | 314 | 8 | 19 | 584 | 2 | 575 | 5.64e-155 | 457 |
MS.gene34999.t1 | AT2G26690 | 43.937 | 569 | 303 | 7 | 20 | 583 | 2 | 559 | 9.73e-153 | 451 |
MS.gene34999.t1 | AT3G53960 | 40.964 | 581 | 331 | 6 | 5 | 582 | 2 | 573 | 6.27e-152 | 450 |
MS.gene34999.t1 | AT2G37900 | 39.826 | 575 | 330 | 6 | 15 | 585 | 9 | 571 | 1.98e-147 | 437 |
MS.gene34999.t1 | AT5G19640 | 40.522 | 575 | 319 | 7 | 11 | 580 | 26 | 582 | 2.49e-146 | 436 |
MS.gene34999.t1 | AT1G12110 | 42.857 | 560 | 308 | 5 | 32 | 583 | 17 | 572 | 1.16e-145 | 433 |
MS.gene34999.t1 | AT1G22540 | 42.321 | 560 | 293 | 9 | 30 | 583 | 18 | 553 | 2.35e-143 | 426 |
MS.gene34999.t1 | AT2G26690 | 44.299 | 535 | 282 | 7 | 54 | 583 | 3 | 526 | 4.74e-143 | 425 |
MS.gene34999.t1 | AT3G54450 | 39.564 | 551 | 309 | 7 | 40 | 583 | 10 | 543 | 7.41e-142 | 422 |
MS.gene34999.t1 | AT2G26690 | 44.275 | 524 | 276 | 7 | 65 | 583 | 2 | 514 | 2.00e-139 | 416 |
MS.gene34999.t1 | AT1G69870 | 39.437 | 568 | 329 | 8 | 23 | 582 | 34 | 594 | 2.88e-138 | 416 |
MS.gene34999.t1 | AT1G72140 | 41.429 | 560 | 286 | 8 | 30 | 579 | 22 | 549 | 1.10e-137 | 412 |
MS.gene34999.t1 | AT5G13400 | 39.108 | 583 | 330 | 10 | 19 | 582 | 35 | 611 | 1.76e-135 | 408 |
MS.gene34999.t1 | AT1G22570 | 42.755 | 559 | 284 | 11 | 12 | 560 | 6 | 538 | 9.80e-135 | 404 |
MS.gene34999.t1 | AT1G59740 | 39.304 | 575 | 331 | 8 | 6 | 573 | 5 | 568 | 7.41e-134 | 403 |
MS.gene34999.t1 | AT1G22550 | 39.243 | 581 | 318 | 9 | 12 | 583 | 6 | 560 | 1.69e-130 | 394 |
MS.gene34999.t1 | AT3G21670 | 39.753 | 566 | 311 | 6 | 28 | 582 | 12 | 558 | 9.69e-128 | 387 |
MS.gene34999.t1 | AT1G69850 | 37.024 | 578 | 348 | 6 | 19 | 582 | 4 | 579 | 1.79e-127 | 387 |
MS.gene34999.t1 | AT1G72130 | 39.318 | 557 | 297 | 9 | 34 | 585 | 16 | 536 | 5.79e-127 | 384 |
MS.gene34999.t1 | AT2G37900 | 39.563 | 503 | 290 | 5 | 85 | 585 | 2 | 492 | 1.09e-126 | 381 |
MS.gene34999.t1 | AT1G33440 | 39.216 | 561 | 315 | 8 | 28 | 579 | 24 | 567 | 4.24e-126 | 384 |
MS.gene34999.t1 | AT1G27040 | 37.566 | 567 | 320 | 5 | 28 | 580 | 9 | 555 | 9.19e-126 | 381 |
MS.gene34999.t1 | AT1G27040 | 37.566 | 567 | 320 | 5 | 28 | 580 | 13 | 559 | 1.34e-125 | 381 |
MS.gene34999.t1 | AT1G52190 | 38.087 | 554 | 323 | 8 | 40 | 579 | 19 | 566 | 1.63e-125 | 382 |
MS.gene34999.t1 | AT1G22570 | 42.857 | 518 | 266 | 9 | 53 | 560 | 4 | 501 | 2.62e-125 | 379 |
MS.gene34999.t1 | AT3G16180 | 39.318 | 557 | 318 | 10 | 36 | 579 | 16 | 565 | 5.89e-125 | 380 |
MS.gene34999.t1 | AT1G72125 | 39.965 | 573 | 314 | 11 | 17 | 583 | 9 | 557 | 1.22e-124 | 379 |
MS.gene34999.t1 | AT5G46050 | 42.955 | 440 | 238 | 5 | 128 | 562 | 1 | 432 | 1.44e-123 | 372 |
MS.gene34999.t1 | AT1G27040 | 38.219 | 539 | 299 | 5 | 56 | 580 | 9 | 527 | 2.88e-121 | 369 |
MS.gene34999.t1 | AT1G18880 | 37.705 | 549 | 325 | 9 | 46 | 582 | 23 | 566 | 4.37e-121 | 370 |
MS.gene34999.t1 | AT1G72120 | 39.415 | 581 | 308 | 12 | 14 | 583 | 6 | 553 | 9.84e-120 | 365 |
MS.gene34999.t1 | AT1G27080 | 36.057 | 563 | 333 | 10 | 34 | 585 | 5 | 551 | 9.24e-112 | 346 |
MS.gene34999.t1 | AT5G62730 | 34.596 | 581 | 331 | 6 | 18 | 579 | 32 | 582 | 2.32e-108 | 337 |
MS.gene34999.t1 | AT5G62680 | 36.116 | 551 | 333 | 10 | 46 | 582 | 47 | 592 | 4.99e-107 | 335 |
MS.gene34999.t1 | AT3G47960 | 35.101 | 547 | 342 | 7 | 46 | 582 | 65 | 608 | 4.41e-103 | 325 |
MS.gene34999.t1 | AT1G69860 | 37.179 | 546 | 322 | 7 | 46 | 585 | 22 | 552 | 1.16e-102 | 322 |
MS.gene34999.t1 | AT5G14940 | 34.103 | 563 | 325 | 10 | 40 | 582 | 5 | 541 | 3.89e-102 | 320 |
MS.gene34999.t1 | AT5G28470 | 32.486 | 551 | 357 | 8 | 36 | 579 | 11 | 553 | 4.04e-102 | 320 |
MS.gene34999.t1 | AT5G62730 | 34.664 | 551 | 311 | 6 | 48 | 579 | 3 | 523 | 4.23e-102 | 319 |
MS.gene34999.t1 | AT1G27080 | 36.138 | 523 | 308 | 9 | 73 | 585 | 3 | 509 | 2.90e-100 | 315 |
MS.gene34999.t1 | AT5G28470 | 32.305 | 551 | 356 | 9 | 36 | 579 | 11 | 551 | 3.80e-99 | 312 |
MS.gene34999.t1 | AT1G72130 | 39.261 | 433 | 231 | 7 | 157 | 585 | 14 | 418 | 6.02e-99 | 307 |
MS.gene34999.t1 | AT1G72130 | 39.261 | 433 | 231 | 7 | 157 | 585 | 14 | 418 | 6.02e-99 | 307 |
MS.gene34999.t1 | AT3G01350 | 32.504 | 563 | 343 | 12 | 39 | 580 | 3 | 549 | 9.45e-91 | 291 |
MS.gene34999.t1 | AT3G25260 | 31.746 | 567 | 331 | 14 | 17 | 579 | 1 | 515 | 3.40e-86 | 277 |
MS.gene34999.t1 | AT3G45650 | 29.381 | 565 | 366 | 7 | 26 | 583 | 6 | 544 | 3.07e-83 | 271 |
MS.gene34999.t1 | AT3G45680 | 29.982 | 567 | 359 | 12 | 26 | 583 | 6 | 543 | 6.31e-80 | 262 |
MS.gene34999.t1 | AT3G45650 | 28.257 | 591 | 365 | 8 | 26 | 583 | 6 | 570 | 2.35e-78 | 259 |
MS.gene34999.t1 | AT3G45660 | 30.297 | 538 | 348 | 7 | 50 | 583 | 29 | 543 | 5.25e-78 | 257 |
MS.gene34999.t1 | AT3G45660 | 30.297 | 538 | 348 | 7 | 50 | 583 | 29 | 543 | 5.25e-78 | 257 |
MS.gene34999.t1 | AT3G45660 | 29.930 | 568 | 368 | 8 | 23 | 583 | 20 | 564 | 5.70e-78 | 258 |
MS.gene34999.t1 | AT3G25280 | 30.769 | 559 | 328 | 10 | 32 | 579 | 11 | 521 | 3.48e-77 | 254 |
MS.gene34999.t1 | AT3G45720 | 28.889 | 540 | 353 | 10 | 50 | 583 | 27 | 541 | 2.25e-73 | 244 |
MS.gene34999.t1 | AT3G45710 | 28.804 | 552 | 358 | 11 | 41 | 583 | 20 | 545 | 4.92e-73 | 244 |
MS.gene34999.t1 | AT3G45700 | 27.941 | 544 | 360 | 10 | 44 | 583 | 18 | 533 | 5.55e-69 | 233 |
MS.gene34999.t1 | AT3G45690 | 27.422 | 547 | 326 | 13 | 30 | 568 | 4 | 487 | 1.35e-60 | 209 |
MS.gene34999.t1 | AT5G11570 | 35.769 | 260 | 155 | 4 | 324 | 581 | 229 | 478 | 3.11e-41 | 156 |
MS.gene34999.t1 | AT5G11570 | 34.177 | 237 | 144 | 6 | 28 | 259 | 2 | 231 | 8.43e-34 | 135 |
MS.gene34999.t1 | AT2G38100 | 27.360 | 519 | 332 | 14 | 70 | 579 | 2 | 484 | 1.62e-40 | 154 |
MS.gene34999.t1 | AT2G38100 | 27.360 | 519 | 332 | 14 | 70 | 579 | 18 | 500 | 3.05e-40 | 154 |
MS.gene34999.t1 | AT2G38100 | 27.360 | 519 | 332 | 14 | 70 | 579 | 24 | 506 | 3.42e-40 | 154 |
Find 141 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGCATTCCTACTTTATTTA+TGG | 0.075098 | 4.4:-18351287 | MS.gene34999:CDS |
ATACCTCAGTATTTCTTATT+TGG | 0.084877 | 4.4:-18350399 | MS.gene34999:CDS |
CAATATGCTGCCTTCTTCTT+TGG | 0.186574 | 4.4:-18351517 | MS.gene34999:CDS |
TGATCCGAATATTTCCAATT+TGG | 0.187016 | 4.4:-18350785 | MS.gene34999:CDS |
AAACCATGTGTGTCGTCTTT+TGG | 0.206810 | 4.4:-18351460 | MS.gene34999:CDS |
TACCTCAGTATTTCTTATTT+GGG | 0.227659 | 4.4:-18350398 | MS.gene34999:CDS |
ACTTGGAACATTCTTGTAAT+AGG | 0.247470 | 4.4:+18351199 | None:intergenic |
TGACCTTTGTTCAGGTTATC+TGG | 0.248081 | 4.4:+18350192 | None:intergenic |
GGCATTCCTACTTTATTTAT+GGG | 0.268231 | 4.4:-18351286 | MS.gene34999:CDS |
GGTCTCTACCTGATTGCATT+TGG | 0.272617 | 4.4:-18351496 | MS.gene34999:CDS |
AAAAGCTTACCTAGGATAAA+TGG | 0.279478 | 4.4:+18352506 | None:intergenic |
AATAATTACAATGAAATAAA+TGG | 0.281390 | 4.4:+18352193 | None:intergenic |
ACTATTCCGGCAGCCCAAAT+TGG | 0.290011 | 4.4:+18350771 | None:intergenic |
ACCCCTTCTTAACCCTTTCT+TGG | 0.293483 | 4.4:+18351410 | None:intergenic |
TGCTAAATATTGAGATAAAA+AGG | 0.294191 | 4.4:+18350523 | None:intergenic |
GTCTCTACCTGATTGCATTT+GGG | 0.300996 | 4.4:-18351495 | MS.gene34999:CDS |
CCCCTTCTTAACCCTTTCTT+GGG | 0.315339 | 4.4:+18351411 | None:intergenic |
GATCCGAATATTTCCAATTT+GGG | 0.320698 | 4.4:-18350784 | MS.gene34999:CDS |
CAGCAACAGGTTTATCAATA+AGG | 0.341199 | 4.4:+18350445 | None:intergenic |
GACAAGAGTTCTGCAATTCT+AGG | 0.341415 | 4.4:-18351106 | MS.gene34999:CDS |
CCCCTGGCAAGGAAATTTAC+AGG | 0.345067 | 4.4:-18350588 | MS.gene34999:CDS |
AATCAAGATGACCTTTGTTC+AGG | 0.347116 | 4.4:+18350184 | None:intergenic |
TGCCTGTAAATTTCCTTGCC+AGG | 0.348055 | 4.4:+18350586 | None:intergenic |
GAAAATGCAGGCTGGGGTAT+TGG | 0.355845 | 4.4:-18351313 | MS.gene34999:CDS |
AACATAGGAGCCCTTGTATC+AGG | 0.359748 | 4.4:-18351358 | MS.gene34999:CDS |
ATTCTTACTTGGGGCGATAC+TGG | 0.361479 | 4.4:-18352235 | MS.gene34999:CDS |
TTGAAGCCTGCAGACTGTTT+CGG | 0.363256 | 4.4:-18351568 | MS.gene34999:CDS |
TGCGAACGTTTGGCATACTA+TGG | 0.375818 | 4.4:-18352386 | MS.gene34999:CDS |
ATACTAATTGGTACAGCAAC+AGG | 0.384112 | 4.4:+18350432 | None:intergenic |
TATTCTAGCTGATTCTTACT+TGG | 0.386592 | 4.4:-18352246 | MS.gene34999:CDS |
CATAAACTCCGCATGGCGTC+TGG | 0.388446 | 4.4:+18350321 | None:intergenic |
GGAAGAAGAATCTCTTCTTC+AGG | 0.394408 | 4.4:-18352882 | MS.gene34999:intron |
CAGCCCAAATTGGAAATATT+CGG | 0.398388 | 4.4:+18350781 | None:intergenic |
CAATGAATGTTGCGAACGTT+TGG | 0.402936 | 4.4:-18352396 | MS.gene34999:CDS |
TTATTTATGGGATTAGCTAT+AGG | 0.403195 | 4.4:-18351274 | MS.gene34999:CDS |
ACTACACAAGGTGGAAATCC+TGG | 0.403776 | 4.4:-18350222 | MS.gene34999:CDS |
TGCTATCTTACACCACTCAT+TGG | 0.408107 | 4.4:-18352272 | MS.gene34999:CDS |
GATGGTTCGGTTGACTTTGA+AGG | 0.415640 | 4.4:-18352572 | MS.gene34999:CDS |
ATTCTAGCTGATTCTTACTT+GGG | 0.418870 | 4.4:-18352245 | MS.gene34999:CDS |
GCGGAGTTTATGCAGTGCTT+TGG | 0.423325 | 4.4:-18350310 | MS.gene34999:CDS |
CCACAAACATTGTTGACAGC+TGG | 0.430858 | 4.4:+18350730 | None:intergenic |
ATGTAGTTTGCGGGTGAGAT+AGG | 0.443137 | 4.4:+18352343 | None:intergenic |
TCCGCATGGCGTCTGGAGAT+TGG | 0.446869 | 4.4:+18350328 | None:intergenic |
CCGGTATTCTGCTTGAGAAC+AGG | 0.450038 | 4.4:+18352545 | None:intergenic |
CACCAGTCCCAAATGCAATC+AGG | 0.453567 | 4.4:+18351488 | None:intergenic |
TACCTGATTGCATTTGGGAC+TGG | 0.455757 | 4.4:-18351490 | MS.gene34999:CDS |
CATTTCCTTGATGTAGTTTG+CGG | 0.458161 | 4.4:+18352333 | None:intergenic |
GCAGGCTGGGGTATTGGATT+CGG | 0.460754 | 4.4:-18351307 | MS.gene34999:CDS |
TACATTGACTCTTTCTGCAT+CGG | 0.462493 | 4.4:-18351599 | MS.gene34999:CDS |
ATTTCCTTGATGTAGTTTGC+GGG | 0.466534 | 4.4:+18352334 | None:intergenic |
CAATAAAAGTGCCTGATACA+AGG | 0.470243 | 4.4:+18351347 | None:intergenic |
GCGATACACCGGAGATGGTT+CGG | 0.475150 | 4.4:-18352585 | MS.gene34999:CDS |
ATGATACTGATCCCCAAGAA+AGG | 0.475732 | 4.4:-18351423 | MS.gene34999:CDS |
ACTTAGCTTCTTAAATATGT+TGG | 0.477213 | 4.4:-18350139 | MS.gene34999:CDS |
GAGTTGCAAAGAATGGGAAT+TGG | 0.483571 | 4.4:-18350546 | MS.gene34999:CDS |
GCCTGTAAATTTCCTTGCCA+GGG | 0.484042 | 4.4:+18350587 | None:intergenic |
AAAGCTTGTCCATTTATCCT+AGG | 0.484795 | 4.4:-18352515 | MS.gene34999:intron |
TCTGGGTTCCAGTCTATGAC+AGG | 0.485500 | 4.4:-18350620 | MS.gene34999:CDS |
AGAATTGCAGAACTCTTGTC+TGG | 0.490797 | 4.4:+18351109 | None:intergenic |
TCAAAACTTGAGAGGGAAGC+TGG | 0.492545 | 4.4:+18350660 | None:intergenic |
TACAAGAATGTTCCAAGTTG+TGG | 0.492885 | 4.4:-18351194 | MS.gene34999:CDS |
GAAAAGATGCTACCACAACT+TGG | 0.493115 | 4.4:+18351182 | None:intergenic |
AAAGTCAACCGAACCATCTC+CGG | 0.494164 | 4.4:+18352577 | None:intergenic |
TCCCCAAGAAAGGGTTAAGA+AGG | 0.498271 | 4.4:-18351413 | MS.gene34999:CDS |
CACAAACATTGTTGACAGCT+GGG | 0.503033 | 4.4:+18350731 | None:intergenic |
ATATTTCCAATTTGGGCTGC+CGG | 0.503529 | 4.4:-18350777 | MS.gene34999:CDS |
TACAAGAGACTACTATCCTC+AGG | 0.507492 | 4.4:+18351139 | None:intergenic |
ATGGTTCGGTTGACTTTGAA+GGG | 0.508855 | 4.4:-18352571 | MS.gene34999:CDS |
GATTCAAGAAAATGCAGGCT+GGG | 0.519096 | 4.4:-18351320 | MS.gene34999:CDS |
ACTATAATCCTGTCATAGAC+TGG | 0.521555 | 4.4:+18350612 | None:intergenic |
TTCTGAAGGATGAGCAGAGA+AGG | 0.522440 | 4.4:-18352607 | MS.gene34999:intron |
CCAGCTGTCAACAATGTTTG+TGG | 0.523589 | 4.4:-18350730 | MS.gene34999:CDS |
CCTGTTCTCAAGCAGAATAC+CGG | 0.523975 | 4.4:-18352545 | MS.gene34999:CDS |
GCTAATCCCATAAATAAAGT+AGG | 0.526869 | 4.4:+18351280 | None:intergenic |
TGACAGGATTATAGTTCCCC+TGG | 0.528093 | 4.4:-18350604 | MS.gene34999:CDS |
CAGTCTGCAGGCTTCAATGC+GGG | 0.529912 | 4.4:+18351574 | None:intergenic |
TCAAGCAGAATACCGGCCAT+TGG | 0.534006 | 4.4:-18352538 | MS.gene34999:CDS |
CTGCAAGAAATGTGACCACT+TGG | 0.536880 | 4.4:-18352304 | MS.gene34999:CDS |
GGATTCAAGAAAATGCAGGC+TGG | 0.539579 | 4.4:-18351321 | MS.gene34999:CDS |
CTGATTGCATTTGGGACTGG+TGG | 0.541290 | 4.4:-18351487 | MS.gene34999:CDS |
AGAGAATGATTCATCACTTG+TGG | 0.547544 | 4.4:-18352903 | MS.gene34999:CDS |
GGATTATAGTTCCCCTGGCA+AGG | 0.552068 | 4.4:-18350599 | MS.gene34999:CDS |
GCTGAACCGAAACAGTCTGC+AGG | 0.553406 | 4.4:+18351562 | None:intergenic |
TGGACAAGCTTTCCAATGGC+CGG | 0.554291 | 4.4:+18352526 | None:intergenic |
TTCTAGCTGATTCTTACTTG+GGG | 0.554518 | 4.4:-18352244 | MS.gene34999:CDS |
GAGACTTTGCACTGTGACAC+AGG | 0.556132 | 4.4:-18350826 | MS.gene34999:CDS |
CAGGTAGAGACCAAAGAAGA+AGG | 0.556686 | 4.4:+18351507 | None:intergenic |
CTACACAAGGTGGAAATCCT+GGG | 0.557038 | 4.4:-18350221 | MS.gene34999:CDS |
AGAAGGCGATACACCGGAGA+TGG | 0.558838 | 4.4:-18352590 | MS.gene34999:CDS |
AATAAAAGTGCCTGATACAA+GGG | 0.559865 | 4.4:+18351348 | None:intergenic |
GGTCACATTTCTTGCAGCAG+AGG | 0.560390 | 4.4:+18352310 | None:intergenic |
TTGCACTGTGACACAGGTGG+AGG | 0.563549 | 4.4:-18350820 | MS.gene34999:CDS |
TGATACTGATCCCCAAGAAA+GGG | 0.568693 | 4.4:-18351422 | MS.gene34999:CDS |
TATTGTGAAGGAGTGGCTGA+AGG | 0.569410 | 4.4:+18351535 | None:intergenic |
ACCTCAGTATTTCTTATTTG+GGG | 0.570703 | 4.4:-18350397 | MS.gene34999:CDS |
CCCTTCTTAACCCTTTCTTG+GGG | 0.573006 | 4.4:+18351412 | None:intergenic |
TCAACAATGTTTGTGGAACA+AGG | 0.575130 | 4.4:-18350723 | MS.gene34999:CDS |
AGCAGAAGTATTCACAAACG+TGG | 0.576227 | 4.4:-18350373 | MS.gene34999:CDS |
CTCACCCGCAAACTACATCA+AGG | 0.577887 | 4.4:-18352338 | MS.gene34999:CDS |
ACTATGATGGACACAAGTAT+TGG | 0.580948 | 4.4:-18350699 | MS.gene34999:CDS |
GCAGAAGTATTCACAAACGT+GGG | 0.583778 | 4.4:-18350372 | MS.gene34999:CDS |
GTTCTGCAATTCTAGGAAGT+CGG | 0.585591 | 4.4:-18351099 | MS.gene34999:CDS |
CCCCAAGAAAGGGTTAAGAA+GGG | 0.586458 | 4.4:-18351412 | MS.gene34999:CDS |
TATTACATCAAAACTTGAGA+GGG | 0.586875 | 4.4:+18350653 | None:intergenic |
AGAAATGTGACCACTTGGCA+AGG | 0.587065 | 4.4:-18352299 | MS.gene34999:CDS |
GAGCAGAGAAGGCGATACAC+CGG | 0.588196 | 4.4:-18352596 | MS.gene34999:CDS |
TCACAGTGCAAAGTCTCCAC+AGG | 0.589021 | 4.4:+18350832 | None:intergenic |
CCTGTAAATTTCCTTGCCAG+GGG | 0.589579 | 4.4:+18350588 | None:intergenic |
TAGAGCATAGTGATGAGCTA+AGG | 0.592451 | 4.4:-18351072 | MS.gene34999:intron |
ATTGTGAAGGAGTGGCTGAA+GGG | 0.595876 | 4.4:+18351536 | None:intergenic |
GTTCGGTTGACTTTGAAGGG+AGG | 0.598065 | 4.4:-18352568 | MS.gene34999:CDS |
TTATTACATCAAAACTTGAG+AGG | 0.610706 | 4.4:+18350652 | None:intergenic |
GGCAGCATATTGTGAAGGAG+TGG | 0.612387 | 4.4:+18351528 | None:intergenic |
AAGAAGGCAGCATATTGTGA+AGG | 0.613318 | 4.4:+18351523 | None:intergenic |
GCGGTATTTGGTTGTCCCTG+AGG | 0.614533 | 4.4:-18351155 | MS.gene34999:CDS |
GTGTGGATTCAAGAAAATGC+AGG | 0.620641 | 4.4:-18351325 | MS.gene34999:CDS |
GCTAGAATAGCTCCAATGAG+TGG | 0.625100 | 4.4:+18352260 | None:intergenic |
AGCACTGCATAAACTCCGCA+TGG | 0.625778 | 4.4:+18350314 | None:intergenic |
GTGGCGACTATTCTAACCTG+TGG | 0.627719 | 4.4:-18350848 | MS.gene34999:CDS |
TGTGGAACAAGGAACTATGA+TGG | 0.627968 | 4.4:-18350712 | MS.gene34999:CDS |
CCCAAGAAAGGGTTAAGAAG+GGG | 0.629712 | 4.4:-18351411 | MS.gene34999:CDS |
ATTCAAGAAAATGCAGGCTG+GGG | 0.634416 | 4.4:-18351319 | MS.gene34999:CDS |
AGGTTATCTGGAATCCACCC+AGG | 0.636000 | 4.4:+18350204 | None:intergenic |
TCTGATGCTGAGAGGAAAAG+TGG | 0.637296 | 4.4:-18350867 | MS.gene34999:CDS |
TAAATGGACAAGCTTTCCAA+TGG | 0.641099 | 4.4:+18352522 | None:intergenic |
ACAAGAGACTACTATCCTCA+GGG | 0.646212 | 4.4:+18351140 | None:intergenic |
ATAGCAAGTGCCTTGCCAAG+TGG | 0.646727 | 4.4:+18352289 | None:intergenic |
ACCAATCTCCAGACGCCATG+CGG | 0.649819 | 4.4:-18350329 | MS.gene34999:CDS |
CTATAGTGTCTGATGCTGAG+AGG | 0.651673 | 4.4:-18350875 | MS.gene34999:CDS |
AAATTTACAGGCAAAGAACG+AGG | 0.651776 | 4.4:-18350576 | MS.gene34999:CDS |
GCCCCAAAAGACGACACACA+TGG | 0.665180 | 4.4:+18351457 | None:intergenic |
GCCCCAAATAAGAAATACTG+AGG | 0.668426 | 4.4:+18350396 | None:intergenic |
GTAACTCACTTCACTACACA+AGG | 0.671941 | 4.4:-18350234 | MS.gene34999:CDS |
AAGTGATGAATCATTCTCTG+TGG | 0.673151 | 4.4:+18352907 | None:intergenic |
ACTCACTTCACTACACAAGG+TGG | 0.673462 | 4.4:-18350231 | MS.gene34999:CDS |
ACTTTGCACTGTGACACAGG+TGG | 0.676355 | 4.4:-18350823 | MS.gene34999:CDS |
CAGAAGTATTCACAAACGTG+GGG | 0.695368 | 4.4:-18350371 | MS.gene34999:CDS |
ATTCCAGATAACCTGAACAA+AGG | 0.696262 | 4.4:-18350195 | MS.gene34999:CDS |
CACAAGGTGGAAATCCTGGG+TGG | 0.700761 | 4.4:-18350218 | MS.gene34999:CDS |
AAACTTGAGAGGGAAGCTGG+TGG | 0.700875 | 4.4:+18350663 | None:intergenic |
ACAGTCTGCAGGCTTCAATG+CGG | 0.704360 | 4.4:+18351573 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATATATTTTTTTTTAAAT+GGG | + | chr4.4:18351237-18351256 | None:intergenic | 0.0% |
!! | AATAATTACAATGAAATAAA+TGG | + | chr4.4:18350816-18350835 | None:intergenic | 10.0% |
!! | ATTTGAAAAAATATACTAAT+TGG | + | chr4.4:18352589-18352608 | None:intergenic | 10.0% |
!! | GTATAATAAATATAATTAAG+TGG | + | chr4.4:18350337-18350356 | None:intergenic | 10.0% |
!!! | AAGTTTTTAACATTAAATTA+AGG | - | chr4.4:18351128-18351147 | MS.gene34999:CDS | 10.0% |
!! | AAATATATAAGGTCAATATT+AGG | - | chr4.4:18351247-18351266 | MS.gene34999:CDS | 15.0% |
!! | ATGAATTAAACTAATAATCA+TGG | + | chr4.4:18350359-18350378 | None:intergenic | 15.0% |
!! | CTTCAAAAAAAATTGAATTA+AGG | - | chr4.4:18351155-18351174 | MS.gene34999:CDS | 15.0% |
!! | TAATGTTAAAAACTTCAATA+TGG | + | chr4.4:18351123-18351142 | None:intergenic | 15.0% |
!!! | TAATTTGTCTGAATAATAAT+TGG | - | chr4.4:18351971-18351990 | MS.gene34999:intron | 15.0% |
!! | AGACAATATTTGAAGAAAAA+AGG | + | chr4.4:18350166-18350185 | None:intergenic | 20.0% |
!! | GATCATAGTAAATTCAAAAT+AGG | + | chr4.4:18351067-18351086 | None:intergenic | 20.0% |
!! | TAATAGACAATATCACAAAA+TGG | + | chr4.4:18352046-18352065 | None:intergenic | 20.0% |
!! | TGCTAAATATTGAGATAAAA+AGG | + | chr4.4:18352486-18352505 | None:intergenic | 20.0% |
!!! | ATGTAATAAGTGTTATTTTC+TGG | - | chr4.4:18352368-18352387 | MS.gene34999:CDS | 20.0% |
!!! | ATGTCTTATTGTTTTAATGA+AGG | - | chr4.4:18352092-18352111 | MS.gene34999:intron | 20.0% |
!!! | GTAAATTCAAAATAGGTTTT+CGG | + | chr4.4:18351060-18351079 | None:intergenic | 20.0% |
!!! | TGTAATAAGTGTTATTTTCT+GGG | - | chr4.4:18352369-18352388 | MS.gene34999:CDS | 20.0% |
!!! | TTTTACTTTTCTATCAACAT+AGG | - | chr4.4:18351633-18351652 | MS.gene34999:intron | 20.0% |
!!! | TTTTTTCTTCTTGTACTTTT+TGG | + | chr4.4:18352908-18352927 | None:intergenic | 20.0% |
! | AAAAGAATTTGTACTCCAAA+TGG | + | chr4.4:18350968-18350987 | None:intergenic | 25.0% |
! | AACAGCATTAAAAACTATTC+CGG | + | chr4.4:18352251-18352270 | None:intergenic | 25.0% |
! | AACTGATTAGAGAATAATGA+AGG | - | chr4.4:18351002-18351021 | MS.gene34999:intron | 25.0% |
! | AATGAAAAAAAAGCTTACCT+AGG | + | chr4.4:18350511-18350530 | None:intergenic | 25.0% |
! | ACTTAGCTTCTTAAATATGT+TGG | - | chr4.4:18352867-18352886 | MS.gene34999:intron | 25.0% |
! | ATAATTAAGTGGATATGACA+AGG | + | chr4.4:18350326-18350345 | None:intergenic | 25.0% |
! | ATACCTCAGTATTTCTTATT+TGG | - | chr4.4:18352607-18352626 | MS.gene34999:intron | 25.0% |
! | GTAATTATTACAATCCGATA+AGG | - | chr4.4:18350827-18350846 | MS.gene34999:CDS | 25.0% |
! | TATTACATCAAAACTTGAGA+GGG | + | chr4.4:18352356-18352375 | None:intergenic | 25.0% |
! | TGCAATTTATTGTATCCATT+TGG | - | chr4.4:18350950-18350969 | MS.gene34999:intron | 25.0% |
! | TTATTACATCAAAACTTGAG+AGG | + | chr4.4:18352357-18352376 | None:intergenic | 25.0% |
! | TTGTGATATTGTCTATTAAG+AGG | - | chr4.4:18352048-18352067 | MS.gene34999:intron | 25.0% |
!! | ATTTTGTATCTGAATTCTGA+AGG | - | chr4.4:18350385-18350404 | MS.gene34999:CDS | 25.0% |
!! | TACCTCAGTATTTCTTATTT+GGG | - | chr4.4:18352608-18352627 | MS.gene34999:intron | 25.0% |
!!! | AAATTAAATCTTCTGAAGCA+AGG | + | chr4.4:18352019-18352038 | None:intergenic | 25.0% |
!!! | GTCATCTTGATTATTTTTTC+TGG | - | chr4.4:18352833-18352852 | MS.gene34999:intron | 25.0% |
!!! | TTATTTATGGGATTAGCTAT+AGG | - | chr4.4:18351732-18351751 | MS.gene34999:intron | 25.0% |
AAAAGCTTACCTAGGATAAA+TGG | + | chr4.4:18350503-18350522 | None:intergenic | 30.0% | |
AACAAAGCATATGTAAGCAA+AGG | + | chr4.4:18351325-18351344 | None:intergenic | 30.0% | |
AAGAAAAAAGGTAGAGAGAA+AGG | + | chr4.4:18350154-18350173 | None:intergenic | 30.0% | |
ACTTGGAACATTCTTGTAAT+AGG | + | chr4.4:18351810-18351829 | None:intergenic | 30.0% | |
ACTTGTGTTAATCTGTAACA+AGG | - | chr4.4:18351363-18351382 | MS.gene34999:CDS | 30.0% | |
AGAAAAAAGGTAGAGAGAAA+GGG | + | chr4.4:18350153-18350172 | None:intergenic | 30.0% | |
GATCCGAATATTTCCAATTT+GGG | - | chr4.4:18352222-18352241 | MS.gene34999:CDS | 30.0% | |
GCTAATCCCATAAATAAAGT+AGG | + | chr4.4:18351729-18351748 | None:intergenic | 30.0% | |
TCTACAGATTTCAAAAACCA+GGG | - | chr4.4:18351778-18351797 | MS.gene34999:intron | 30.0% | |
TGATATGAAATACGAATCAC+AGG | - | chr4.4:18350587-18350606 | MS.gene34999:CDS | 30.0% | |
TGATCCGAATATTTCCAATT+TGG | - | chr4.4:18352221-18352240 | MS.gene34999:CDS | 30.0% | |
TTACAGCAAAAGCAATACTT+TGG | + | chr4.4:18350278-18350297 | None:intergenic | 30.0% | |
TTAGAGAATAATGAAGGATG+TGG | - | chr4.4:18351008-18351027 | MS.gene34999:intron | 30.0% | |
! | ACCTCAGTATTTCTTATTTG+GGG | - | chr4.4:18352609-18352628 | MS.gene34999:intron | 30.0% |
! | ATTCTAGCTGATTCTTACTT+GGG | - | chr4.4:18350761-18350780 | MS.gene34999:CDS | 30.0% |
! | GACAAGGTATTTACAATTAC+TGG | + | chr4.4:18350310-18350329 | None:intergenic | 30.0% |
! | GGCATTCCTACTTTATTTAT+GGG | - | chr4.4:18351720-18351739 | MS.gene34999:intron | 30.0% |
! | TATTCTAGCTGATTCTTACT+TGG | - | chr4.4:18350760-18350779 | MS.gene34999:CDS | 30.0% |
! | TTTTCAGAGTTGCAAAGAAT+GGG | - | chr4.4:18352454-18352473 | MS.gene34999:intron | 30.0% |
!! | AATAAAAGTGCCTGATACAA+GGG | + | chr4.4:18351661-18351680 | None:intergenic | 30.0% |
!!! | TATTTTTTCTGGCTTTTAGC+TGG | - | chr4.4:18352844-18352863 | MS.gene34999:intron | 30.0% |
!!! | TGGTTTTTGAAATCTGTAGA+GGG | + | chr4.4:18351778-18351797 | None:intergenic | 30.0% |
AAAGCTTGTCCATTTATCCT+AGG | - | chr4.4:18350491-18350510 | MS.gene34999:CDS | 35.0% | |
AAATTTACAGGCAAAGAACG+AGG | - | chr4.4:18352430-18352449 | MS.gene34999:intron | 35.0% | |
AAGTGATGAATCATTCTCTG+TGG | + | chr4.4:18350102-18350121 | None:intergenic | 35.0% | |
AATCAAGATGACCTTTGTTC+AGG | + | chr4.4:18352825-18352844 | None:intergenic | 35.0% | |
ACTATAATCCTGTCATAGAC+TGG | + | chr4.4:18352397-18352416 | None:intergenic | 35.0% | |
AGAGAATGATTCATCACTTG+TGG | - | chr4.4:18350103-18350122 | MS.gene34999:CDS | 35.0% | |
AGGTCAATATTAGGAACAGT+TGG | - | chr4.4:18351256-18351275 | MS.gene34999:CDS | 35.0% | |
ATACTAATTGGTACAGCAAC+AGG | + | chr4.4:18352577-18352596 | None:intergenic | 35.0% | |
ATGCAAAAATTAGACGTGTG+TGG | + | chr4.4:18350928-18350947 | None:intergenic | 35.0% | |
ATTCCAGATAACCTGAACAA+AGG | - | chr4.4:18352811-18352830 | MS.gene34999:intron | 35.0% | |
CAGCAACAGGTTTATCAATA+AGG | + | chr4.4:18352564-18352583 | None:intergenic | 35.0% | |
CAGCCCAAATTGGAAATATT+CGG | + | chr4.4:18352228-18352247 | None:intergenic | 35.0% | |
CATTTCCTTGATGTAGTTTG+CGG | + | chr4.4:18350676-18350695 | None:intergenic | 35.0% | |
CTACAGATTTCAAAAACCAG+GGG | - | chr4.4:18351779-18351798 | MS.gene34999:intron | 35.0% | |
CTCTACAGATTTCAAAAACC+AGG | - | chr4.4:18351777-18351796 | MS.gene34999:intron | 35.0% | |
TAAATGGACAAGCTTTCCAA+TGG | + | chr4.4:18350487-18350506 | None:intergenic | 35.0% | |
TACAAGAATGTTCCAAGTTG+TGG | - | chr4.4:18351812-18351831 | MS.gene34999:intron | 35.0% | |
TACAGATTTCAAAAACCAGG+GGG | - | chr4.4:18351780-18351799 | MS.gene34999:intron | 35.0% | |
TCAACAATGTTTGTGGAACA+AGG | - | chr4.4:18352283-18352302 | MS.gene34999:CDS | 35.0% | |
TGACAAACTAGACTGTAACA+TGG | - | chr4.4:18350226-18350245 | MS.gene34999:CDS | 35.0% | |
! | ATCTTTTCAGAAGCGGTATT+TGG | - | chr4.4:18351839-18351858 | MS.gene34999:intron | 35.0% |
! | ATTTCCTTGATGTAGTTTGC+GGG | + | chr4.4:18350675-18350694 | None:intergenic | 35.0% |
! | CGGCATTCCTACTTTATTTA+TGG | - | chr4.4:18351719-18351738 | MS.gene34999:intron | 35.0% |
! | CTATGAGAATAGAGCCTTAT+CGG | + | chr4.4:18350844-18350863 | None:intergenic | 35.0% |
! | CTTGCTATAATGCTGGAAAA+TGG | - | chr4.4:18350892-18350911 | MS.gene34999:CDS | 35.0% |
! | CTTTTCAGAGTTGCAAAGAA+TGG | - | chr4.4:18352453-18352472 | MS.gene34999:intron | 35.0% |
! | GCTATAGGAAGCTTCTTTTT+AGG | - | chr4.4:18351747-18351766 | MS.gene34999:intron | 35.0% |
! | TATCAGGCACTTTTATTGTG+TGG | - | chr4.4:18351664-18351683 | MS.gene34999:intron | 35.0% |
! | TCTCAATCTTGCTATAATGC+TGG | - | chr4.4:18350885-18350904 | MS.gene34999:CDS | 35.0% |
! | TGCAATGGAAGGAAAGTTTT+TGG | + | chr4.4:18351089-18351108 | None:intergenic | 35.0% |
! | TTCTAGCTGATTCTTACTTG+GGG | - | chr4.4:18350762-18350781 | MS.gene34999:CDS | 35.0% |
!! | ACTATGATGGACACAAGTAT+TGG | - | chr4.4:18352307-18352326 | MS.gene34999:CDS | 35.0% |
!! | AGAAAAGCACTGGAAAATTG+AGG | - | chr4.4:18351032-18351051 | MS.gene34999:intron | 35.0% |
!! | CAATAAAAGTGCCTGATACA+AGG | + | chr4.4:18351662-18351681 | None:intergenic | 35.0% |
!! | CTTTGGACACTGATTTACAA+TGG | + | chr4.4:18350261-18350280 | None:intergenic | 35.0% |
!! | TAAATCTTCTGAAGCAAGGA+AGG | + | chr4.4:18352015-18352034 | None:intergenic | 35.0% |
!! | TACATTGACTCTTTCTGCAT+CGG | - | chr4.4:18351407-18351426 | MS.gene34999:CDS | 35.0% |
!!! | AGAAGGGGTCATTTTTCAAT+TGG | - | chr4.4:18351610-18351629 | MS.gene34999:CDS | 35.0% |
!!! | CTGGTTTTTGAAATCTGTAG+AGG | + | chr4.4:18351779-18351798 | None:intergenic | 35.0% |
!!! | GGTTTTTGAAATCTGTAGAG+GGG | + | chr4.4:18351777-18351796 | None:intergenic | 35.0% |
AAGAAGGCAGCATATTGTGA+AGG | + | chr4.4:18351486-18351505 | None:intergenic | 40.0% | |
ACAAGAGACTACTATCCTCA+GGG | + | chr4.4:18351869-18351888 | None:intergenic | 40.0% | |
AGAATTGCAGAACTCTTGTC+TGG | + | chr4.4:18351900-18351919 | None:intergenic | 40.0% | |
AGTAGAATCGATGCAATGGA+AGG | + | chr4.4:18351100-18351119 | None:intergenic | 40.0% | |
AGTTATGTTCAGTGCTCAAG+TGG | + | chr4.4:18351197-18351216 | None:intergenic | 40.0% | |
ATATTTCCAATTTGGGCTGC+CGG | - | chr4.4:18352229-18352248 | MS.gene34999:CDS | 40.0% | |
ATGATACTGATCCCCAAGAA+AGG | - | chr4.4:18351583-18351602 | MS.gene34999:CDS | 40.0% | |
ATGGAGTAGAATCGATGCAA+TGG | + | chr4.4:18351104-18351123 | None:intergenic | 40.0% | |
ATTCAAGAAAATGCAGGCTG+GGG | - | chr4.4:18351687-18351706 | MS.gene34999:intron | 40.0% | |
CAATATGCTGCCTTCTTCTT+TGG | - | chr4.4:18351489-18351508 | MS.gene34999:CDS | 40.0% | |
CAATGAATGTTGCGAACGTT+TGG | - | chr4.4:18350610-18350629 | MS.gene34999:CDS | 40.0% | |
CACAAACATTGTTGACAGCT+GGG | + | chr4.4:18352278-18352297 | None:intergenic | 40.0% | |
GAAAAGATGCTACCACAACT+TGG | + | chr4.4:18351827-18351846 | None:intergenic | 40.0% | |
GACAAGAGTTCTGCAATTCT+AGG | - | chr4.4:18351900-18351919 | MS.gene34999:intron | 40.0% | |
GAGTTGCAAAGAATGGGAAT+TGG | - | chr4.4:18352460-18352479 | MS.gene34999:intron | 40.0% | |
GATTCAAGAAAATGCAGGCT+GGG | - | chr4.4:18351686-18351705 | MS.gene34999:intron | 40.0% | |
GCCCCAAATAAGAAATACTG+AGG | + | chr4.4:18352613-18352632 | None:intergenic | 40.0% | |
GGAAGAAGAATCTCTTCTTC+AGG | - | chr4.4:18350124-18350143 | MS.gene34999:CDS | 40.0% | |
GTAACTCACTTCACTACACA+AGG | - | chr4.4:18352772-18352791 | MS.gene34999:intron | 40.0% | |
GTCTCTACCTGATTGCATTT+GGG | - | chr4.4:18351511-18351530 | MS.gene34999:CDS | 40.0% | |
GTGTGGATTCAAGAAAATGC+AGG | - | chr4.4:18351681-18351700 | MS.gene34999:intron | 40.0% | |
TACAAGAGACTACTATCCTC+AGG | + | chr4.4:18351870-18351889 | None:intergenic | 40.0% | |
TAGAGCATAGTGATGAGCTA+AGG | - | chr4.4:18351934-18351953 | MS.gene34999:intron | 40.0% | |
TAGCAAGATTGAGATGTGTG+TGG | + | chr4.4:18350879-18350898 | None:intergenic | 40.0% | |
TGATACTGATCCCCAAGAAA+GGG | - | chr4.4:18351584-18351603 | MS.gene34999:CDS | 40.0% | |
TGCTATCTTACACCACTCAT+TGG | - | chr4.4:18350734-18350753 | MS.gene34999:CDS | 40.0% | |
TGTGGAACAAGGAACTATGA+TGG | - | chr4.4:18352294-18352313 | MS.gene34999:CDS | 40.0% | |
! | AAACCATGTGTGTCGTCTTT+TGG | - | chr4.4:18351546-18351565 | MS.gene34999:CDS | 40.0% |
! | AACCATGTGTGTCGTCTTTT+GGG | - | chr4.4:18351547-18351566 | MS.gene34999:CDS | 40.0% |
! | GTTCTGCAATTCTAGGAAGT+CGG | - | chr4.4:18351907-18351926 | MS.gene34999:intron | 40.0% |
! | TAACAAGGCTGTTTCATGCA+GGG | - | chr4.4:18351378-18351397 | MS.gene34999:CDS | 40.0% |
! | TGACCTTTGTTCAGGTTATC+TGG | + | chr4.4:18352817-18352836 | None:intergenic | 40.0% |
! | TGGTAGCATCTTTTCAGAAG+CGG | - | chr4.4:18351832-18351851 | MS.gene34999:intron | 40.0% |
!! | AGCAGAAGTATTCACAAACG+TGG | - | chr4.4:18352633-18352652 | MS.gene34999:intron | 40.0% |
!! | ATGGTTCGGTTGACTTTGAA+GGG | - | chr4.4:18350435-18350454 | MS.gene34999:CDS | 40.0% |
!! | CAGAAGTATTCACAAACGTG+GGG | - | chr4.4:18352635-18352654 | MS.gene34999:intron | 40.0% |
!! | GCACTTTTGACTACTTCACT+GGG | - | chr4.4:18352718-18352737 | MS.gene34999:intron | 40.0% |
!! | GCAGAAGTATTCACAAACGT+GGG | - | chr4.4:18352634-18352653 | MS.gene34999:intron | 40.0% |
AAAGTCAACCGAACCATCTC+CGG | + | chr4.4:18350432-18350451 | None:intergenic | 45.0% | |
AACATAGGAGCCCTTGTATC+AGG | - | chr4.4:18351648-18351667 | MS.gene34999:intron | 45.0% | |
ACCCCTTCTTAACCCTTTCT+TGG | + | chr4.4:18351599-18351618 | None:intergenic | 45.0% | |
ACTACACAAGGTGGAAATCC+TGG | - | chr4.4:18352784-18352803 | MS.gene34999:intron | 45.0% | |
ACTCACTTCACTACACAAGG+TGG | - | chr4.4:18352775-18352794 | MS.gene34999:intron | 45.0% | |
AGAAATGTGACCACTTGGCA+AGG | - | chr4.4:18350707-18350726 | MS.gene34999:CDS | 45.0% | |
ATTCTTACTTGGGGCGATAC+TGG | - | chr4.4:18350771-18350790 | MS.gene34999:CDS | 45.0% | |
ATTGTGAAGGAGTGGCTGAA+GGG | + | chr4.4:18351473-18351492 | None:intergenic | 45.0% | |
CAGGTAGAGACCAAAGAAGA+AGG | + | chr4.4:18351502-18351521 | None:intergenic | 45.0% | |
CCACAAACATTGTTGACAGC+TGG | + | chr4.4:18352279-18352298 | None:intergenic | 45.0% | |
CCAGCTGTCAACAATGTTTG+TGG | - | chr4.4:18352276-18352295 | MS.gene34999:CDS | 45.0% | |
CCCAAGAAAGGGTTAAGAAG+GGG | - | chr4.4:18351595-18351614 | MS.gene34999:CDS | 45.0% | |
CCCCAAGAAAGGGTTAAGAA+GGG | - | chr4.4:18351594-18351613 | MS.gene34999:CDS | 45.0% | |
CCCCTTCTTAACCCTTTCTT+GGG | + | chr4.4:18351598-18351617 | None:intergenic | 45.0% | |
CCCTTCTTAACCCTTTCTTG+GGG | + | chr4.4:18351597-18351616 | None:intergenic | 45.0% | |
CCTGTAAATTTCCTTGCCAG+GGG | + | chr4.4:18352421-18352440 | None:intergenic | 45.0% | |
CCTGTTCTCAAGCAGAATAC+CGG | - | chr4.4:18350461-18350480 | MS.gene34999:CDS | 45.0% | |
CTACACAAGGTGGAAATCCT+GGG | - | chr4.4:18352785-18352804 | MS.gene34999:intron | 45.0% | |
CTATAGTGTCTGATGCTGAG+AGG | - | chr4.4:18352131-18352150 | MS.gene34999:intron | 45.0% | |
CTGCAAGAAATGTGACCACT+TGG | - | chr4.4:18350702-18350721 | MS.gene34999:CDS | 45.0% | |
GCCTGTAAATTTCCTTGCCA+GGG | + | chr4.4:18352422-18352441 | None:intergenic | 45.0% | |
GCTAGAATAGCTCCAATGAG+TGG | + | chr4.4:18350749-18350768 | None:intergenic | 45.0% | |
GGATTCAAGAAAATGCAGGC+TGG | - | chr4.4:18351685-18351704 | MS.gene34999:intron | 45.0% | |
GGTCTCTACCTGATTGCATT+TGG | - | chr4.4:18351510-18351529 | MS.gene34999:CDS | 45.0% | |
TATTGTGAAGGAGTGGCTGA+AGG | + | chr4.4:18351474-18351493 | None:intergenic | 45.0% | |
TCAAAACTTGAGAGGGAAGC+TGG | + | chr4.4:18352349-18352368 | None:intergenic | 45.0% | |
TCCCCAAGAAAGGGTTAAGA+AGG | - | chr4.4:18351593-18351612 | MS.gene34999:CDS | 45.0% | |
TCTGATGCTGAGAGGAAAAG+TGG | - | chr4.4:18352139-18352158 | MS.gene34999:intron | 45.0% | |
TGACAGGATTATAGTTCCCC+TGG | - | chr4.4:18352402-18352421 | MS.gene34999:intron | 45.0% | |
TGCCTGTAAATTTCCTTGCC+AGG | + | chr4.4:18352423-18352442 | None:intergenic | 45.0% | |
TGCGAACGTTTGGCATACTA+TGG | - | chr4.4:18350620-18350639 | MS.gene34999:CDS | 45.0% | |
TTGAAGCCTGCAGACTGTTT+CGG | - | chr4.4:18351438-18351457 | MS.gene34999:CDS | 45.0% | |
! | ACCATGTGTGTCGTCTTTTG+GGG | - | chr4.4:18351548-18351567 | MS.gene34999:CDS | 45.0% |
! | AGGATGTGGAAGAAAAGCAC+TGG | - | chr4.4:18351022-18351041 | MS.gene34999:intron | 45.0% |
! | ATGTAGTTTGCGGGTGAGAT+AGG | + | chr4.4:18350666-18350685 | None:intergenic | 45.0% |
! | GTAACAAGGCTGTTTCATGC+AGG | - | chr4.4:18351377-18351396 | MS.gene34999:CDS | 45.0% |
! | TACCTGATTGCATTTGGGAC+TGG | - | chr4.4:18351516-18351535 | MS.gene34999:CDS | 45.0% |
! | TTCTGAAGGATGAGCAGAGA+AGG | - | chr4.4:18350399-18350418 | MS.gene34999:CDS | 45.0% |
!! | GATGGTTCGGTTGACTTTGA+AGG | - | chr4.4:18350434-18350453 | MS.gene34999:CDS | 45.0% |
!! | GGCACTTTTGACTACTTCAC+TGG | - | chr4.4:18352717-18352736 | MS.gene34999:intron | 45.0% |
!! | CATTTAAAAAAAAATATATA+AGG | - | chr4.4:18351236-18351255 | MS.gene34999:CDS | 5.0% |
!!! | CTTATATATTTTTTTTTAAA+TGG | + | chr4.4:18351238-18351257 | None:intergenic | 5.0% |
AAACTTGAGAGGGAAGCTGG+TGG | + | chr4.4:18352346-18352365 | None:intergenic | 50.0% | |
ACAGTCTGCAGGCTTCAATG+CGG | + | chr4.4:18351436-18351455 | None:intergenic | 50.0% | |
ACTATTCCGGCAGCCCAAAT+TGG | + | chr4.4:18352238-18352257 | None:intergenic | 50.0% | |
ACTTTGCACTGTGACACAGG+TGG | - | chr4.4:18352183-18352202 | MS.gene34999:intron | 50.0% | |
AGCACTGCATAAACTCCGCA+TGG | + | chr4.4:18352695-18352714 | None:intergenic | 50.0% | |
ATAGCAAGTGCCTTGCCAAG+TGG | + | chr4.4:18350720-18350739 | None:intergenic | 50.0% | |
CACCAGTCCCAAATGCAATC+AGG | + | chr4.4:18351521-18351540 | None:intergenic | 50.0% | |
CCCCTGGCAAGGAAATTTAC+AGG | - | chr4.4:18352418-18352437 | MS.gene34999:intron | 50.0% | |
CCGGTATTCTGCTTGAGAAC+AGG | + | chr4.4:18350464-18350483 | None:intergenic | 50.0% | |
CTCACCCGCAAACTACATCA+AGG | - | chr4.4:18350668-18350687 | MS.gene34999:CDS | 50.0% | |
CTTGTAATAGGACTTCCCCC+TGG | + | chr4.4:18351798-18351817 | None:intergenic | 50.0% | |
GAAAATGCAGGCTGGGGTAT+TGG | - | chr4.4:18351693-18351712 | MS.gene34999:intron | 50.0% | |
GAGACTTTGCACTGTGACAC+AGG | - | chr4.4:18352180-18352199 | MS.gene34999:intron | 50.0% | |
GCGGAGTTTATGCAGTGCTT+TGG | - | chr4.4:18352696-18352715 | MS.gene34999:intron | 50.0% | |
GGATTATAGTTCCCCTGGCA+AGG | - | chr4.4:18352407-18352426 | MS.gene34999:intron | 50.0% | |
GGCAGCATATTGTGAAGGAG+TGG | + | chr4.4:18351481-18351500 | None:intergenic | 50.0% | |
GGTCACATTTCTTGCAGCAG+AGG | + | chr4.4:18350699-18350718 | None:intergenic | 50.0% | |
GTGGCGACTATTCTAACCTG+TGG | - | chr4.4:18352158-18352177 | MS.gene34999:intron | 50.0% | |
TCAAGCAGAATACCGGCCAT+TGG | - | chr4.4:18350468-18350487 | MS.gene34999:CDS | 50.0% | |
TCACAGTGCAAAGTCTCCAC+AGG | + | chr4.4:18352177-18352196 | None:intergenic | 50.0% | |
TCTGGGTTCCAGTCTATGAC+AGG | - | chr4.4:18352386-18352405 | MS.gene34999:CDS | 50.0% | |
TGGACAAGCTTTCCAATGGC+CGG | + | chr4.4:18350483-18350502 | None:intergenic | 50.0% | |
! | AGGTTATCTGGAATCCACCC+AGG | + | chr4.4:18352805-18352824 | None:intergenic | 50.0% |
! | CTGATTGCATTTGGGACTGG+TGG | - | chr4.4:18351519-18351538 | MS.gene34999:CDS | 50.0% |
! | GTTCGGTTGACTTTGAAGGG+AGG | - | chr4.4:18350438-18350457 | MS.gene34999:CDS | 50.0% |
ACCAATCTCCAGACGCCATG+CGG | - | chr4.4:18352677-18352696 | MS.gene34999:intron | 55.0% | |
AGAAGGCGATACACCGGAGA+TGG | - | chr4.4:18350416-18350435 | MS.gene34999:CDS | 55.0% | |
CACAAGGTGGAAATCCTGGG+TGG | - | chr4.4:18352788-18352807 | MS.gene34999:intron | 55.0% | |
CAGTCTGCAGGCTTCAATGC+GGG | + | chr4.4:18351435-18351454 | None:intergenic | 55.0% | |
CATAAACTCCGCATGGCGTC+TGG | + | chr4.4:18352688-18352707 | None:intergenic | 55.0% | |
GAGCAGAGAAGGCGATACAC+CGG | - | chr4.4:18350410-18350429 | MS.gene34999:CDS | 55.0% | |
GCCCCAAAAGACGACACACA+TGG | + | chr4.4:18351552-18351571 | None:intergenic | 55.0% | |
GCGATACACCGGAGATGGTT+CGG | - | chr4.4:18350421-18350440 | MS.gene34999:CDS | 55.0% | |
GCGGTATTTGGTTGTCCCTG+AGG | - | chr4.4:18351851-18351870 | MS.gene34999:intron | 55.0% | |
GCTGAACCGAAACAGTCTGC+AGG | + | chr4.4:18351447-18351466 | None:intergenic | 55.0% | |
TTGCACTGTGACACAGGTGG+AGG | - | chr4.4:18352186-18352205 | MS.gene34999:intron | 55.0% | |
!! | GCAGGCTGGGGTATTGGATT+CGG | - | chr4.4:18351699-18351718 | MS.gene34999:intron | 55.0% |
TCCGCATGGCGTCTGGAGAT+TGG | + | chr4.4:18352681-18352700 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 18350092 | 18352936 | 18350092 | ID=MS.gene34999 |
chr4.4 | mRNA | 18350092 | 18352936 | 18350092 | ID=MS.gene34999.t1;Parent=MS.gene34999 |
chr4.4 | exon | 18352883 | 18352936 | 18352883 | ID=MS.gene34999.t1.exon1;Parent=MS.gene34999.t1 |
chr4.4 | CDS | 18352883 | 18352936 | 18352883 | ID=cds.MS.gene34999.t1;Parent=MS.gene34999.t1 |
chr4.4 | exon | 18352516 | 18352621 | 18352516 | ID=MS.gene34999.t1.exon2;Parent=MS.gene34999.t1 |
chr4.4 | CDS | 18352516 | 18352621 | 18352516 | ID=cds.MS.gene34999.t1;Parent=MS.gene34999.t1 |
chr4.4 | exon | 18352202 | 18352419 | 18352202 | ID=MS.gene34999.t1.exon3;Parent=MS.gene34999.t1 |
chr4.4 | CDS | 18352202 | 18352419 | 18352202 | ID=cds.MS.gene34999.t1;Parent=MS.gene34999.t1 |
chr4.4 | exon | 18351073 | 18351629 | 18351073 | ID=MS.gene34999.t1.exon4;Parent=MS.gene34999.t1 |
chr4.4 | CDS | 18351073 | 18351629 | 18351073 | ID=cds.MS.gene34999.t1;Parent=MS.gene34999.t1 |
chr4.4 | exon | 18350092 | 18350914 | 18350092 | ID=MS.gene34999.t1.exon5;Parent=MS.gene34999.t1 |
chr4.4 | CDS | 18350092 | 18350914 | 18350092 | ID=cds.MS.gene34999.t1;Parent=MS.gene34999.t1 |
Gene Sequence |
Protein sequence |