Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36331.t1 | XP_024633177.1 | 95.6 | 637 | 27 | 1 | 1 | 636 | 1 | 637 | 0.00E+00 | 1135.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36331.t1 | Q9M817 | 54.9 | 577 | 253 | 6 | 15 | 585 | 9 | 584 | 1.5e-176 | 620.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36331.t1 | Q2HU41 | 95.6 | 637 | 27 | 1 | 1 | 636 | 1 | 637 | 0.0e+00 | 1135.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049230 | MS.gene36331 | 0.804938 | 1.70E-49 | -1.69E-46 |
MS.gene049378 | MS.gene36331 | 0.810354 | 1.20E-50 | -1.69E-46 |
MS.gene04991 | MS.gene36331 | -0.826684 | 2.37E-54 | -1.69E-46 |
MS.gene050105 | MS.gene36331 | 0.804298 | 2.31E-49 | -1.69E-46 |
MS.gene050226 | MS.gene36331 | 0.806678 | 7.32E-50 | -1.69E-46 |
MS.gene050228 | MS.gene36331 | 0.808236 | 3.42E-50 | -1.69E-46 |
MS.gene050623 | MS.gene36331 | -0.853764 | 1.93E-61 | -1.69E-46 |
MS.gene050642 | MS.gene36331 | 0.810392 | 1.18E-50 | -1.69E-46 |
MS.gene050654 | MS.gene36331 | 0.804841 | 1.78E-49 | -1.69E-46 |
MS.gene051122 | MS.gene36331 | 0.813533 | 2.44E-51 | -1.69E-46 |
MS.gene051535 | MS.gene36331 | 0.816762 | 4.68E-52 | -1.69E-46 |
MS.gene052309 | MS.gene36331 | -0.802393 | 5.73E-49 | -1.69E-46 |
MS.gene053216 | MS.gene36331 | 0.80456 | 2.04E-49 | -1.69E-46 |
MS.gene055441 | MS.gene36331 | 0.804127 | 2.51E-49 | -1.69E-46 |
MS.gene055701 | MS.gene36331 | 0.822911 | 1.84E-53 | -1.69E-46 |
MS.gene056464 | MS.gene36331 | -0.802818 | 4.68E-49 | -1.69E-46 |
MS.gene056849 | MS.gene36331 | 0.887211 | 1.74E-72 | -1.69E-46 |
MS.gene056975 | MS.gene36331 | 0.810134 | 1.34E-50 | -1.69E-46 |
MS.gene056979 | MS.gene36331 | 0.804947 | 1.69E-49 | -1.69E-46 |
MS.gene05761 | MS.gene36331 | 0.811721 | 6.07E-51 | -1.69E-46 |
MS.gene058223 | MS.gene36331 | -0.810883 | 9.24E-51 | -1.69E-46 |
MS.gene058435 | MS.gene36331 | 0.800819 | 1.21E-48 | -1.69E-46 |
MS.gene058595 | MS.gene36331 | 0.800641 | 1.31E-48 | -1.69E-46 |
MS.gene059872 | MS.gene36331 | -0.833162 | 6.25E-56 | -1.69E-46 |
MS.gene060084 | MS.gene36331 | 0.826724 | 2.32E-54 | -1.69E-46 |
MS.gene060297 | MS.gene36331 | 0.836711 | 7.97E-57 | -1.69E-46 |
MS.gene060802 | MS.gene36331 | 0.802942 | 4.42E-49 | -1.69E-46 |
MS.gene060851 | MS.gene36331 | 0.813419 | 2.58E-51 | -1.69E-46 |
MS.gene060852 | MS.gene36331 | 0.812996 | 3.20E-51 | -1.69E-46 |
MS.gene060869 | MS.gene36331 | 0.812085 | 5.06E-51 | -1.69E-46 |
MS.gene060870 | MS.gene36331 | 0.805563 | 1.26E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36331.t1 | MTR_2g101560 | 95.918 | 637 | 25 | 1 | 1 | 636 | 1 | 637 | 0.0 | 1201 |
MS.gene36331.t1 | MTR_2g101610 | 84.748 | 636 | 97 | 0 | 1 | 636 | 1 | 636 | 0.0 | 1103 |
MS.gene36331.t1 | MTR_2g101590 | 83.333 | 636 | 105 | 1 | 1 | 636 | 1 | 635 | 0.0 | 1081 |
MS.gene36331.t1 | MTR_2g101640 | 79.310 | 638 | 119 | 5 | 1 | 636 | 1 | 627 | 0.0 | 1047 |
MS.gene36331.t1 | MTR_4g011280 | 66.611 | 599 | 187 | 6 | 1 | 592 | 1 | 593 | 0.0 | 816 |
MS.gene36331.t1 | MTR_1g057460 | 68.696 | 575 | 155 | 5 | 1 | 575 | 24 | 573 | 0.0 | 810 |
MS.gene36331.t1 | MTR_1g057460 | 69.290 | 521 | 141 | 3 | 55 | 575 | 1 | 502 | 0.0 | 749 |
MS.gene36331.t1 | MTR_0236s0050 | 69.290 | 521 | 141 | 3 | 55 | 575 | 1 | 502 | 0.0 | 728 |
MS.gene36331.t1 | MTR_2g101650 | 55.993 | 584 | 246 | 6 | 1 | 580 | 1 | 577 | 0.0 | 686 |
MS.gene36331.t1 | MTR_8g103233 | 46.805 | 579 | 295 | 6 | 16 | 586 | 6 | 579 | 0.0 | 537 |
MS.gene36331.t1 | MTR_1g009200 | 47.804 | 592 | 292 | 8 | 5 | 584 | 1 | 587 | 9.98e-179 | 520 |
MS.gene36331.t1 | MTR_1g026740 | 46.154 | 559 | 287 | 7 | 14 | 568 | 7 | 555 | 1.02e-175 | 511 |
MS.gene36331.t1 | MTR_1g026750 | 47.232 | 578 | 284 | 9 | 14 | 586 | 8 | 569 | 1.19e-170 | 498 |
MS.gene36331.t1 | MTR_1g026770 | 45.596 | 579 | 289 | 10 | 15 | 586 | 6 | 565 | 6.54e-165 | 484 |
MS.gene36331.t1 | MTR_5g038060 | 36.457 | 587 | 348 | 11 | 15 | 585 | 19 | 596 | 1.85e-127 | 389 |
MS.gene36331.t1 | MTR_4g107580 | 34.975 | 609 | 365 | 11 | 9 | 602 | 7 | 599 | 1.83e-122 | 376 |
MS.gene36331.t1 | MTR_4g107510 | 36.991 | 565 | 344 | 8 | 11 | 566 | 20 | 581 | 1.08e-121 | 374 |
MS.gene36331.t1 | MTR_5g055000 | 34.843 | 574 | 354 | 9 | 25 | 589 | 16 | 578 | 1.42e-118 | 365 |
MS.gene36331.t1 | MTR_8g469480 | 35.789 | 570 | 342 | 10 | 30 | 583 | 41 | 602 | 1.01e-115 | 358 |
MS.gene36331.t1 | MTR_7g088790 | 33.895 | 593 | 367 | 12 | 15 | 593 | 17 | 598 | 1.08e-115 | 358 |
MS.gene36331.t1 | MTR_7g088820 | 32.945 | 601 | 378 | 12 | 10 | 598 | 8 | 595 | 1.87e-113 | 352 |
MS.gene36331.t1 | MTR_4g107530 | 34.583 | 587 | 362 | 12 | 14 | 581 | 15 | 598 | 3.35e-113 | 352 |
MS.gene36331.t1 | MTR_7g088825 | 32.776 | 598 | 377 | 13 | 17 | 600 | 12 | 598 | 1.07e-112 | 350 |
MS.gene36331.t1 | MTR_8g469470 | 34.744 | 567 | 351 | 11 | 14 | 566 | 17 | 578 | 5.84e-109 | 340 |
MS.gene36331.t1 | MTR_5g038190 | 34.215 | 567 | 348 | 13 | 14 | 566 | 10 | 565 | 4.98e-106 | 332 |
MS.gene36331.t1 | MTR_3g462710 | 34.601 | 552 | 338 | 12 | 25 | 566 | 22 | 560 | 1.46e-101 | 320 |
MS.gene36331.t1 | MTR_4g107610 | 31.667 | 600 | 385 | 12 | 14 | 601 | 18 | 604 | 3.47e-97 | 310 |
MS.gene36331.t1 | MTR_1g009170 | 41.084 | 443 | 192 | 11 | 154 | 593 | 9 | 385 | 2.93e-96 | 301 |
MS.gene36331.t1 | MTR_7g088820 | 31.868 | 546 | 347 | 12 | 65 | 598 | 1 | 533 | 4.80e-96 | 305 |
MS.gene36331.t1 | MTR_4g015080 | 33.877 | 552 | 340 | 12 | 25 | 566 | 32 | 568 | 7.71e-96 | 306 |
MS.gene36331.t1 | MTR_7g067010 | 32.743 | 565 | 346 | 11 | 15 | 560 | 3 | 552 | 4.72e-94 | 301 |
MS.gene36331.t1 | MTR_7g064780 | 30.537 | 596 | 381 | 12 | 14 | 586 | 3 | 588 | 3.55e-92 | 296 |
MS.gene36331.t1 | MTR_7g064800 | 31.325 | 581 | 370 | 14 | 25 | 589 | 24 | 591 | 5.11e-90 | 291 |
MS.gene36331.t1 | MTR_3g112460 | 32.297 | 579 | 352 | 12 | 25 | 594 | 21 | 568 | 9.85e-88 | 285 |
MS.gene36331.t1 | MTR_5g012270 | 30.986 | 568 | 365 | 15 | 25 | 579 | 26 | 579 | 1.46e-87 | 284 |
MS.gene36331.t1 | MTR_3g112470 | 32.124 | 579 | 353 | 12 | 25 | 594 | 21 | 568 | 2.09e-87 | 283 |
MS.gene36331.t1 | MTR_3g112450 | 33.055 | 599 | 356 | 14 | 7 | 594 | 6 | 570 | 3.17e-87 | 283 |
MS.gene36331.t1 | MTR_7g088820 | 31.440 | 493 | 313 | 12 | 118 | 598 | 6 | 485 | 7.29e-85 | 274 |
MS.gene36331.t1 | MTR_2g093160 | 33.563 | 581 | 334 | 16 | 1 | 566 | 1 | 544 | 7.70e-85 | 276 |
MS.gene36331.t1 | MTR_2g093180 | 33.391 | 578 | 340 | 14 | 1 | 566 | 1 | 545 | 1.27e-83 | 273 |
MS.gene36331.t1 | MTR_7g006540 | 32.378 | 593 | 353 | 15 | 29 | 592 | 65 | 638 | 3.16e-83 | 275 |
MS.gene36331.t1 | MTR_2g093640 | 34.072 | 587 | 323 | 17 | 1 | 566 | 1 | 544 | 3.40e-83 | 272 |
MS.gene36331.t1 | MTR_3g462710 | 35.129 | 464 | 278 | 12 | 113 | 566 | 1 | 451 | 2.47e-82 | 267 |
MS.gene36331.t1 | MTR_7g098200 | 31.389 | 583 | 363 | 13 | 36 | 600 | 38 | 601 | 4.55e-82 | 270 |
MS.gene36331.t1 | MTR_7g098200 | 31.652 | 575 | 362 | 13 | 36 | 600 | 38 | 591 | 5.56e-82 | 270 |
MS.gene36331.t1 | MTR_4g033315 | 31.469 | 572 | 352 | 14 | 4 | 566 | 10 | 550 | 2.02e-81 | 268 |
MS.gene36331.t1 | MTR_4g033310 | 31.469 | 572 | 352 | 14 | 4 | 566 | 10 | 550 | 2.02e-81 | 268 |
MS.gene36331.t1 | MTR_5g012290 | 28.846 | 572 | 370 | 12 | 14 | 566 | 14 | 567 | 3.22e-81 | 268 |
MS.gene36331.t1 | MTR_7g098220 | 31.311 | 610 | 379 | 16 | 11 | 604 | 12 | 597 | 4.84e-81 | 268 |
MS.gene36331.t1 | MTR_1g075440 | 30.676 | 577 | 366 | 13 | 26 | 585 | 26 | 585 | 9.62e-81 | 266 |
MS.gene36331.t1 | MTR_4g033325 | 31.944 | 576 | 342 | 14 | 4 | 566 | 10 | 548 | 5.35e-80 | 264 |
MS.gene36331.t1 | MTR_4g101380 | 30.637 | 581 | 371 | 13 | 25 | 588 | 24 | 589 | 6.59e-80 | 265 |
MS.gene36331.t1 | MTR_3g069500 | 29.256 | 605 | 385 | 14 | 1 | 589 | 1 | 578 | 2.08e-79 | 263 |
MS.gene36331.t1 | MTR_5g085850 | 30.442 | 565 | 359 | 11 | 29 | 584 | 32 | 571 | 2.87e-79 | 263 |
MS.gene36331.t1 | MTR_7g098040 | 30.964 | 591 | 376 | 15 | 26 | 600 | 32 | 606 | 5.07e-79 | 263 |
MS.gene36331.t1 | MTR_7g098090 | 30.486 | 597 | 371 | 14 | 26 | 598 | 31 | 607 | 1.21e-78 | 261 |
MS.gene36331.t1 | MTR_7g098220 | 31.359 | 574 | 356 | 14 | 45 | 604 | 4 | 553 | 1.61e-78 | 259 |
MS.gene36331.t1 | MTR_7g098160 | 30.442 | 588 | 378 | 13 | 26 | 598 | 31 | 602 | 1.84e-78 | 261 |
MS.gene36331.t1 | MTR_3g005010 | 31.047 | 554 | 339 | 10 | 25 | 570 | 28 | 546 | 3.86e-78 | 258 |
MS.gene36331.t1 | MTR_1g041815 | 31.652 | 575 | 361 | 13 | 36 | 596 | 36 | 592 | 9.01e-78 | 259 |
MS.gene36331.t1 | MTR_1g041835 | 31.183 | 558 | 354 | 12 | 36 | 579 | 36 | 577 | 1.03e-77 | 258 |
MS.gene36331.t1 | MTR_7g098180 | 31.005 | 587 | 366 | 14 | 21 | 587 | 23 | 590 | 1.52e-77 | 258 |
MS.gene36331.t1 | MTR_3g069420 | 31.915 | 564 | 354 | 14 | 36 | 588 | 43 | 587 | 1.55e-77 | 258 |
MS.gene36331.t1 | MTR_3g069440 | 29.443 | 574 | 382 | 11 | 24 | 589 | 29 | 587 | 1.73e-77 | 258 |
MS.gene36331.t1 | MTR_3g014790 | 31.272 | 566 | 331 | 13 | 21 | 563 | 11 | 541 | 2.78e-77 | 256 |
MS.gene36331.t1 | MTR_4g114340 | 29.492 | 590 | 398 | 11 | 1 | 586 | 1 | 576 | 3.47e-77 | 257 |
MS.gene36331.t1 | MTR_7g098230 | 30.769 | 572 | 358 | 14 | 41 | 594 | 40 | 591 | 5.47e-77 | 256 |
MS.gene36331.t1 | MTR_3g072300 | 31.009 | 545 | 343 | 15 | 36 | 566 | 33 | 558 | 8.14e-77 | 256 |
MS.gene36331.t1 | MTR_4g019580 | 30.168 | 537 | 354 | 12 | 36 | 566 | 45 | 566 | 1.11e-76 | 256 |
MS.gene36331.t1 | MTR_0294s0020 | 30.890 | 573 | 352 | 14 | 4 | 566 | 10 | 548 | 4.19e-76 | 253 |
MS.gene36331.t1 | MTR_1g042310 | 31.485 | 559 | 344 | 16 | 26 | 566 | 24 | 561 | 1.42e-75 | 253 |
MS.gene36331.t1 | MTR_4g033330 | 31.127 | 559 | 339 | 16 | 4 | 551 | 10 | 533 | 1.85e-75 | 251 |
MS.gene36331.t1 | MTR_7g065080 | 28.896 | 616 | 381 | 18 | 2 | 601 | 9 | 583 | 9.87e-75 | 250 |
MS.gene36331.t1 | MTR_7g005930 | 29.302 | 587 | 385 | 11 | 10 | 586 | 18 | 584 | 4.71e-74 | 249 |
MS.gene36331.t1 | MTR_1g042310 | 31.540 | 539 | 331 | 15 | 45 | 566 | 7 | 524 | 9.85e-74 | 247 |
MS.gene36331.t1 | MTR_2g017750 | 28.952 | 601 | 401 | 14 | 1 | 584 | 11 | 602 | 4.23e-73 | 246 |
MS.gene36331.t1 | MTR_8g038880 | 31.304 | 575 | 348 | 10 | 28 | 587 | 21 | 563 | 5.86e-73 | 245 |
MS.gene36331.t1 | MTR_1g042310 | 31.413 | 538 | 331 | 15 | 46 | 566 | 1 | 517 | 1.07e-72 | 244 |
MS.gene36331.t1 | MTR_3g100980 | 30.071 | 562 | 360 | 12 | 16 | 564 | 5 | 546 | 6.27e-72 | 243 |
MS.gene36331.t1 | MTR_5g014150 | 28.881 | 554 | 381 | 8 | 37 | 582 | 54 | 602 | 1.29e-71 | 243 |
MS.gene36331.t1 | MTR_7g065080 | 29.755 | 531 | 323 | 16 | 85 | 601 | 2 | 496 | 2.02e-69 | 234 |
MS.gene36331.t1 | MTR_2g005130 | 27.844 | 589 | 388 | 14 | 11 | 586 | 18 | 582 | 2.11e-69 | 236 |
MS.gene36331.t1 | MTR_4g033375 | 31.115 | 511 | 318 | 10 | 11 | 514 | 15 | 498 | 2.63e-69 | 234 |
MS.gene36331.t1 | MTR_4g033325 | 31.692 | 467 | 273 | 12 | 112 | 566 | 18 | 450 | 2.77e-69 | 233 |
MS.gene36331.t1 | MTR_8g087780 | 29.848 | 593 | 380 | 15 | 15 | 579 | 2 | 586 | 4.19e-69 | 235 |
MS.gene36331.t1 | MTR_1g085090 | 27.496 | 611 | 404 | 15 | 11 | 611 | 3 | 584 | 6.39e-69 | 235 |
MS.gene36331.t1 | MTR_1g041875 | 30.912 | 537 | 335 | 15 | 26 | 549 | 27 | 540 | 3.96e-68 | 233 |
MS.gene36331.t1 | MTR_8g087810 | 30.626 | 591 | 379 | 16 | 15 | 579 | 2 | 587 | 5.70e-68 | 232 |
MS.gene36331.t1 | MTR_4g033325 | 32.184 | 435 | 260 | 10 | 144 | 566 | 13 | 424 | 2.34e-67 | 226 |
MS.gene36331.t1 | MTR_1g116930 | 28.998 | 569 | 365 | 13 | 15 | 566 | 8 | 554 | 2.51e-67 | 231 |
MS.gene36331.t1 | MTR_7g098200 | 30.754 | 504 | 316 | 11 | 113 | 600 | 1 | 487 | 1.34e-66 | 226 |
MS.gene36331.t1 | MTR_4g033385 | 31.533 | 463 | 282 | 12 | 112 | 566 | 16 | 451 | 2.20e-66 | 225 |
MS.gene36331.t1 | MTR_3g100980 | 28.644 | 590 | 360 | 13 | 16 | 564 | 5 | 574 | 2.62e-66 | 228 |
MS.gene36331.t1 | MTR_7g111260 | 29.078 | 564 | 365 | 14 | 11 | 565 | 3 | 540 | 3.83e-66 | 228 |
MS.gene36331.t1 | MTR_4g033395 | 30.577 | 520 | 327 | 12 | 2 | 514 | 6 | 498 | 1.30e-65 | 224 |
MS.gene36331.t1 | MTR_7g013270 | 29.295 | 553 | 361 | 10 | 26 | 566 | 89 | 623 | 1.21e-64 | 225 |
MS.gene36331.t1 | MTR_1g041885 | 29.423 | 520 | 330 | 16 | 46 | 552 | 1 | 496 | 2.50e-64 | 221 |
MS.gene36331.t1 | MTR_4g098800 | 28.172 | 536 | 364 | 8 | 37 | 563 | 46 | 569 | 4.06e-63 | 219 |
MS.gene36331.t1 | MTR_4g098800 | 28.172 | 536 | 364 | 8 | 37 | 563 | 111 | 634 | 1.95e-62 | 219 |
MS.gene36331.t1 | MTR_7g010820 | 29.004 | 562 | 364 | 15 | 1 | 544 | 2 | 546 | 6.54e-61 | 213 |
MS.gene36331.t1 | MTR_4g107670 | 27.915 | 566 | 355 | 17 | 28 | 565 | 25 | 565 | 1.26e-60 | 212 |
MS.gene36331.t1 | MTR_8g469310 | 26.903 | 565 | 360 | 14 | 28 | 565 | 27 | 565 | 5.10e-58 | 205 |
MS.gene36331.t1 | MTR_5g038380 | 24.694 | 571 | 382 | 12 | 21 | 565 | 20 | 568 | 3.01e-54 | 195 |
MS.gene36331.t1 | MTR_7g098150 | 30.995 | 442 | 273 | 12 | 26 | 454 | 31 | 453 | 2.98e-52 | 187 |
MS.gene36331.t1 | MTR_4g123537 | 27.336 | 578 | 377 | 17 | 9 | 571 | 23 | 572 | 1.50e-51 | 188 |
MS.gene36331.t1 | MTR_7g098210 | 28.897 | 526 | 272 | 15 | 46 | 561 | 1 | 434 | 1.45e-48 | 176 |
MS.gene36331.t1 | MTR_6g008690 | 25.704 | 568 | 369 | 15 | 18 | 566 | 1 | 534 | 1.18e-46 | 173 |
MS.gene36331.t1 | MTR_4g033310 | 30.462 | 325 | 205 | 6 | 247 | 566 | 178 | 486 | 4.32e-45 | 167 |
MS.gene36331.t1 | MTR_4g033310 | 34.171 | 199 | 114 | 7 | 4 | 200 | 10 | 193 | 3.63e-16 | 82.0 |
MS.gene36331.t1 | MTR_4g024930 | 25.818 | 550 | 361 | 15 | 29 | 566 | 38 | 552 | 3.78e-39 | 152 |
MS.gene36331.t1 | MTR_7g052600 | 25.632 | 554 | 357 | 14 | 21 | 566 | 19 | 525 | 1.27e-38 | 150 |
MS.gene36331.t1 | MTR_7g051880 | 24.343 | 571 | 377 | 13 | 4 | 566 | 2 | 525 | 1.21e-35 | 141 |
MS.gene36331.t1 | MTR_7g051830 | 24.343 | 571 | 377 | 14 | 4 | 566 | 2 | 525 | 4.53e-34 | 137 |
MS.gene36331.t1 | MTR_8g091265 | 39.695 | 131 | 71 | 5 | 294 | 420 | 3 | 129 | 3.67e-18 | 82.0 |
MS.gene36331.t1 | MTR_7g064160 | 32.432 | 111 | 65 | 1 | 11 | 111 | 3 | 113 | 5.70e-14 | 69.3 |
MS.gene36331.t1 | MTR_3g065350 | 25.749 | 167 | 112 | 3 | 336 | 500 | 1 | 157 | 3.73e-13 | 68.2 |
MS.gene36331.t1 | MTR_4g033390 | 34.021 | 97 | 59 | 2 | 484 | 575 | 30 | 126 | 4.97e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36331.t1 | AT1G52190 | 54.939 | 577 | 253 | 6 | 15 | 585 | 9 | 584 | 0.0 | 657 |
MS.gene36331.t1 | AT3G16180 | 53.242 | 586 | 267 | 7 | 11 | 591 | 6 | 589 | 0.0 | 636 |
MS.gene36331.t1 | AT1G69870 | 35.305 | 558 | 344 | 9 | 18 | 566 | 42 | 591 | 2.65e-119 | 368 |
MS.gene36331.t1 | AT5G62680 | 37.271 | 601 | 351 | 14 | 9 | 593 | 25 | 615 | 2.80e-118 | 365 |
MS.gene36331.t1 | AT1G68570 | 35.264 | 587 | 365 | 8 | 9 | 586 | 5 | 585 | 1.11e-114 | 355 |
MS.gene36331.t1 | AT1G18880 | 34.896 | 576 | 353 | 11 | 30 | 594 | 22 | 586 | 2.44e-112 | 349 |
MS.gene36331.t1 | AT3G47960 | 36.572 | 566 | 340 | 10 | 10 | 566 | 50 | 605 | 1.93e-111 | 348 |
MS.gene36331.t1 | AT5G11570 | 38.787 | 544 | 249 | 11 | 28 | 567 | 14 | 477 | 7.51e-111 | 342 |
MS.gene36331.t1 | AT1G27080 | 34.039 | 567 | 347 | 13 | 24 | 580 | 11 | 560 | 6.69e-106 | 332 |
MS.gene36331.t1 | AT1G62200 | 35.079 | 573 | 345 | 10 | 1 | 562 | 25 | 581 | 1.56e-105 | 332 |
MS.gene36331.t1 | AT1G68570 | 34.470 | 557 | 350 | 8 | 39 | 586 | 5 | 555 | 4.99e-103 | 324 |
MS.gene36331.t1 | AT2G02040 | 33.857 | 573 | 356 | 11 | 5 | 566 | 18 | 578 | 5.51e-103 | 325 |
MS.gene36331.t1 | AT3G54140 | 35.185 | 540 | 329 | 11 | 36 | 566 | 33 | 560 | 1.03e-100 | 318 |
MS.gene36331.t1 | AT3G54140 | 35.185 | 540 | 329 | 11 | 36 | 566 | 33 | 560 | 1.03e-100 | 318 |
MS.gene36331.t1 | AT1G62200 | 33.721 | 602 | 343 | 11 | 1 | 562 | 25 | 610 | 1.95e-100 | 319 |
MS.gene36331.t1 | AT1G62200 | 33.721 | 602 | 343 | 11 | 1 | 562 | 39 | 624 | 3.59e-100 | 319 |
MS.gene36331.t1 | AT5G01180 | 35.135 | 555 | 328 | 13 | 21 | 560 | 17 | 554 | 1.51e-99 | 315 |
MS.gene36331.t1 | AT5G01180 | 35.135 | 555 | 328 | 13 | 21 | 560 | 17 | 554 | 1.51e-99 | 315 |
MS.gene36331.t1 | AT5G01180 | 35.135 | 555 | 328 | 13 | 21 | 560 | 17 | 554 | 1.51e-99 | 315 |
MS.gene36331.t1 | AT5G28470 | 33.517 | 543 | 342 | 10 | 25 | 559 | 15 | 546 | 9.11e-98 | 310 |
MS.gene36331.t1 | AT1G27080 | 33.273 | 550 | 340 | 13 | 56 | 595 | 1 | 533 | 3.16e-97 | 308 |
MS.gene36331.t1 | AT5G28470 | 33.333 | 543 | 341 | 11 | 25 | 559 | 15 | 544 | 6.22e-95 | 303 |
MS.gene36331.t1 | AT3G45650 | 32.743 | 565 | 345 | 11 | 9 | 566 | 4 | 540 | 3.08e-91 | 293 |
MS.gene36331.t1 | AT3G45660 | 32.855 | 557 | 345 | 12 | 14 | 566 | 8 | 539 | 4.75e-89 | 288 |
MS.gene36331.t1 | AT3G45660 | 32.855 | 557 | 345 | 12 | 14 | 566 | 8 | 539 | 4.75e-89 | 288 |
MS.gene36331.t1 | AT3G45660 | 32.855 | 557 | 345 | 12 | 14 | 566 | 29 | 560 | 8.99e-89 | 287 |
MS.gene36331.t1 | AT3G54450 | 31.763 | 573 | 347 | 11 | 25 | 580 | 10 | 555 | 3.21e-87 | 283 |
MS.gene36331.t1 | AT3G45650 | 31.303 | 591 | 345 | 12 | 9 | 566 | 4 | 566 | 5.23e-86 | 280 |
MS.gene36331.t1 | AT3G45710 | 31.616 | 563 | 350 | 10 | 12 | 566 | 6 | 541 | 4.55e-85 | 277 |
MS.gene36331.t1 | AT1G69860 | 32.671 | 554 | 338 | 11 | 25 | 566 | 16 | 546 | 1.53e-84 | 276 |
MS.gene36331.t1 | AT2G02020 | 31.685 | 546 | 324 | 10 | 25 | 566 | 40 | 540 | 1.64e-84 | 275 |
MS.gene36331.t1 | AT2G26690 | 30.192 | 573 | 383 | 10 | 13 | 581 | 10 | 569 | 1.59e-82 | 271 |
MS.gene36331.t1 | AT3G45720 | 30.756 | 569 | 352 | 14 | 28 | 588 | 20 | 554 | 7.70e-80 | 263 |
MS.gene36331.t1 | AT2G26690 | 30.642 | 545 | 361 | 10 | 41 | 581 | 5 | 536 | 1.08e-79 | 263 |
MS.gene36331.t1 | AT5G46050 | 30.258 | 542 | 349 | 11 | 21 | 549 | 19 | 544 | 4.09e-79 | 262 |
MS.gene36331.t1 | AT3G21670 | 29.431 | 598 | 392 | 12 | 11 | 599 | 12 | 588 | 1.20e-78 | 261 |
MS.gene36331.t1 | AT2G26690 | 30.784 | 536 | 354 | 10 | 50 | 581 | 2 | 524 | 1.06e-77 | 257 |
MS.gene36331.t1 | AT2G37900 | 29.273 | 550 | 356 | 12 | 24 | 563 | 34 | 560 | 7.05e-77 | 256 |
MS.gene36331.t1 | AT3G45680 | 30.810 | 568 | 356 | 12 | 7 | 566 | 1 | 539 | 1.03e-76 | 255 |
MS.gene36331.t1 | AT1G12110 | 31.771 | 576 | 361 | 15 | 21 | 579 | 19 | 579 | 1.16e-76 | 256 |
MS.gene36331.t1 | AT1G22540 | 31.826 | 553 | 345 | 10 | 21 | 566 | 22 | 549 | 3.75e-76 | 253 |
MS.gene36331.t1 | AT3G45700 | 30.319 | 564 | 346 | 12 | 11 | 566 | 5 | 529 | 2.36e-75 | 251 |
MS.gene36331.t1 | AT1G72125 | 30.185 | 540 | 344 | 9 | 36 | 566 | 38 | 553 | 4.05e-74 | 248 |
MS.gene36331.t1 | AT1G33440 | 28.477 | 604 | 385 | 15 | 9 | 589 | 18 | 597 | 8.51e-74 | 248 |
MS.gene36331.t1 | AT5G46040 | 30.667 | 525 | 337 | 11 | 36 | 549 | 36 | 544 | 1.27e-73 | 248 |
MS.gene36331.t1 | AT2G40460 | 29.946 | 551 | 353 | 12 | 36 | 575 | 33 | 561 | 1.86e-73 | 247 |
MS.gene36331.t1 | AT5G13400 | 31.588 | 573 | 355 | 13 | 29 | 582 | 66 | 620 | 3.17e-73 | 248 |
MS.gene36331.t1 | AT3G53960 | 27.750 | 609 | 401 | 14 | 10 | 594 | 6 | 599 | 2.03e-72 | 245 |
MS.gene36331.t1 | AT2G37900 | 29.091 | 495 | 319 | 11 | 78 | 563 | 10 | 481 | 7.64e-71 | 238 |
MS.gene36331.t1 | AT1G59740 | 28.924 | 567 | 371 | 13 | 11 | 563 | 23 | 571 | 4.01e-70 | 238 |
MS.gene36331.t1 | AT1G72140 | 28.929 | 560 | 340 | 12 | 25 | 566 | 32 | 551 | 4.14e-70 | 237 |
MS.gene36331.t1 | AT1G32450 | 28.147 | 572 | 388 | 9 | 37 | 592 | 47 | 611 | 3.43e-69 | 236 |
MS.gene36331.t1 | AT2G02020 | 29.044 | 544 | 320 | 9 | 25 | 566 | 40 | 519 | 4.74e-69 | 234 |
MS.gene36331.t1 | AT1G22550 | 29.948 | 581 | 362 | 13 | 2 | 566 | 5 | 556 | 1.06e-68 | 234 |
MS.gene36331.t1 | AT1G72120 | 29.720 | 572 | 348 | 12 | 11 | 566 | 16 | 549 | 2.56e-67 | 230 |
MS.gene36331.t1 | AT1G22570 | 29.084 | 557 | 361 | 9 | 2 | 547 | 5 | 538 | 9.39e-67 | 229 |
MS.gene36331.t1 | AT5G46050 | 30.942 | 446 | 285 | 8 | 113 | 549 | 1 | 432 | 1.37e-66 | 226 |
MS.gene36331.t1 | AT1G27040 | 28.650 | 548 | 359 | 10 | 29 | 565 | 29 | 555 | 1.77e-65 | 225 |
MS.gene36331.t1 | AT1G27040 | 28.650 | 548 | 359 | 10 | 29 | 565 | 25 | 551 | 3.37e-65 | 224 |
MS.gene36331.t1 | AT1G72130 | 28.261 | 552 | 342 | 10 | 25 | 566 | 23 | 530 | 2.16e-64 | 221 |
MS.gene36331.t1 | AT1G22570 | 29.537 | 518 | 331 | 9 | 41 | 547 | 7 | 501 | 5.73e-64 | 220 |
MS.gene36331.t1 | AT4G21680 | 27.304 | 586 | 383 | 14 | 3 | 566 | 6 | 570 | 6.30e-64 | 221 |
MS.gene36331.t1 | AT1G27040 | 28.625 | 538 | 352 | 10 | 39 | 565 | 7 | 523 | 2.29e-62 | 216 |
MS.gene36331.t1 | AT3G45690 | 28.801 | 559 | 323 | 15 | 15 | 566 | 6 | 496 | 4.36e-62 | 215 |
MS.gene36331.t1 | AT5G19640 | 27.273 | 583 | 374 | 16 | 28 | 593 | 60 | 609 | 5.20e-58 | 206 |
MS.gene36331.t1 | AT5G14940 | 25.000 | 588 | 353 | 12 | 25 | 572 | 5 | 544 | 1.07e-52 | 190 |
MS.gene36331.t1 | AT1G69850 | 26.011 | 569 | 367 | 14 | 29 | 565 | 27 | 573 | 2.48e-52 | 190 |
MS.gene36331.t1 | AT1G72130 | 28.406 | 433 | 266 | 9 | 144 | 566 | 14 | 412 | 1.78e-50 | 181 |
MS.gene36331.t1 | AT1G72130 | 28.406 | 433 | 266 | 9 | 144 | 566 | 14 | 412 | 1.78e-50 | 181 |
MS.gene36331.t1 | AT3G01350 | 25.694 | 576 | 374 | 16 | 25 | 572 | 5 | 554 | 3.46e-48 | 178 |
MS.gene36331.t1 | AT5G62730 | 24.955 | 557 | 381 | 11 | 28 | 572 | 57 | 588 | 4.20e-47 | 175 |
MS.gene36331.t1 | AT5G62730 | 24.954 | 549 | 375 | 11 | 36 | 572 | 6 | 529 | 1.02e-45 | 170 |
MS.gene36331.t1 | AT3G25260 | 26.128 | 532 | 332 | 15 | 41 | 565 | 35 | 512 | 6.63e-45 | 167 |
MS.gene36331.t1 | AT3G25280 | 25.385 | 520 | 335 | 14 | 52 | 565 | 46 | 518 | 6.03e-37 | 145 |
MS.gene36331.t1 | AT2G38100 | 24.081 | 544 | 353 | 13 | 55 | 586 | 2 | 497 | 1.20e-28 | 120 |
MS.gene36331.t1 | AT2G38100 | 24.081 | 544 | 353 | 13 | 55 | 586 | 18 | 513 | 3.29e-28 | 119 |
MS.gene36331.t1 | AT2G38100 | 24.081 | 544 | 353 | 13 | 55 | 586 | 24 | 519 | 4.07e-28 | 119 |
Find 124 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCAAAGCTCTATTGTTAT+TGG | 0.116841 | 2.2:+2059773 | None:intergenic |
CTTTGTAATAAAACTCATTT+TGG | 0.123205 | 2.2:+2058745 | None:intergenic |
GTCATTTCGACAAATATTTA+TGG | 0.147038 | 2.2:-2058569 | MS.gene36331:CDS |
GATCATCTTGGTTGGAAAAT+TGG | 0.157074 | 2.2:-2059675 | MS.gene36331:CDS |
GCTGAAGCATTCAATGTTAT+TGG | 0.158926 | 2.2:-2058768 | MS.gene36331:CDS |
AAATAAAGCTTGTGTTATTA+AGG | 0.217505 | 2.2:-2059297 | MS.gene36331:CDS |
TTATCTTTGTAATACTTATA+TGG | 0.221781 | 2.2:-2059037 | MS.gene36331:CDS |
ATTTCATGTTCTTTAGCTTT+TGG | 0.223707 | 2.2:-2059825 | MS.gene36331:CDS |
CAATGGAATAACTTTAATAA+TGG | 0.287573 | 2.2:+2059190 | None:intergenic |
GCTTGCACCTTCACTTTGTT+TGG | 0.290635 | 2.2:-2058799 | MS.gene36331:CDS |
TTTATTGCAGATTCTTATAT+TGG | 0.292916 | 2.2:-2060981 | MS.gene36331:CDS |
CTTGGTTGGAAAATTGGTTT+TGG | 0.297432 | 2.2:-2059669 | MS.gene36331:CDS |
TTCAAGATTAGTGAAGAAAA+TGG | 0.297883 | 2.2:-2058312 | MS.gene36331:CDS |
TTAGTATGCAGTTGGGCTTA+TGG | 0.310648 | 2.2:-2058507 | MS.gene36331:CDS |
GCTGTCATAGCAGCTCTATT+TGG | 0.312595 | 2.2:-2059714 | MS.gene36331:CDS |
GATAAGATACCAATGATAAA+AGG | 0.324542 | 2.2:+2061248 | None:intergenic |
TGAAATGATATGTCTGTCTA+AGG | 0.326067 | 2.2:+2059103 | None:intergenic |
CAAGTAGGAGGCTGCGTAGC+TGG | 0.330610 | 2.2:+2059942 | None:intergenic |
GTTATTCCATTGTGGTCAAC+AGG | 0.337103 | 2.2:-2059179 | MS.gene36331:CDS |
AAGGAGAAAGAAAGCAATTC+AGG | 0.340505 | 2.2:-2058871 | MS.gene36331:CDS |
AGGTTCTATTATCAGTTTCC+TGG | 0.349967 | 2.2:-2060937 | MS.gene36331:intron |
ATTAACATCGGAGGCTCGTT+TGG | 0.355446 | 2.2:-2059143 | MS.gene36331:CDS |
GCGTTAATTCTGATAGGAAT+TGG | 0.359891 | 2.2:-2059858 | MS.gene36331:CDS |
TTTGCTGATATACAGCCTTC+AGG | 0.359961 | 2.2:+2059909 | None:intergenic |
GAAACACTAGACATAGTCTT+TGG | 0.360014 | 2.2:+2058717 | None:intergenic |
CAACATGATATTGTATTTGA+TGG | 0.361317 | 2.2:-2061090 | MS.gene36331:CDS |
GCACCTTCACTTTGTTTGGC+TGG | 0.361719 | 2.2:-2058795 | MS.gene36331:CDS |
CCTCTTATCTTTGATGCTAA+AGG | 0.364995 | 2.2:+2058987 | None:intergenic |
TCATTTCGACAAATATTTAT+GGG | 0.366923 | 2.2:-2058568 | MS.gene36331:CDS |
AAAAGAAGACACCAAGTTTC+CGG | 0.373199 | 2.2:+2058665 | None:intergenic |
AGTGTTTCTTCAGCACTCTC+TGG | 0.375458 | 2.2:-2058702 | MS.gene36331:CDS |
CTAACCTTGTCATCAATTTG+TGG | 0.379224 | 2.2:+2058402 | None:intergenic |
TTCCAATAACAATAGAGCTT+TGG | 0.382182 | 2.2:-2059775 | MS.gene36331:CDS |
AGACCACCCTTGCTTCTTTG+TGG | 0.395960 | 2.2:+2061281 | None:intergenic |
TCCAAAGTGAGTGAAGAAAA+TGG | 0.396852 | 2.2:-2058465 | MS.gene36331:CDS |
CGATTCCTAGGTGTTGGAAT+AGG | 0.398985 | 2.2:-2060957 | MS.gene36331:CDS |
TCTTATATTGGTCGATTCCT+AGG | 0.404111 | 2.2:-2060969 | MS.gene36331:CDS |
TTCTTCAGCACTCTCTGGAT+TGG | 0.405295 | 2.2:-2058697 | MS.gene36331:CDS |
CCTTTAGCATCAAAGATAAG+AGG | 0.419532 | 2.2:-2058987 | MS.gene36331:CDS |
ATCAAATACAATATCATGTT+GGG | 0.422265 | 2.2:+2061092 | None:intergenic |
CTTTGGAAATATTCTTCACT+TGG | 0.431586 | 2.2:-2059758 | MS.gene36331:CDS |
ATCAGCAAAACCAGGTCAAA+TGG | 0.449605 | 2.2:-2059895 | MS.gene36331:CDS |
CCAAGTCCCATTCTTATCTT+CGG | 0.449902 | 2.2:+2058945 | None:intergenic |
TGTATTATTTAGTATGCAGT+TGG | 0.452225 | 2.2:-2058515 | MS.gene36331:CDS |
CTCTCTGCGTTAATTCTGAT+AGG | 0.460782 | 2.2:-2059864 | MS.gene36331:CDS |
GGCAATGGCTGCCGGAAACT+TGG | 0.462855 | 2.2:-2058676 | MS.gene36331:CDS |
TGCTGCTGATGAAGAAGAAA+TGG | 0.464327 | 2.2:-2061318 | MS.gene36331:CDS |
CCGAAGATAAGAATGGGACT+TGG | 0.464562 | 2.2:-2058945 | MS.gene36331:CDS |
AAATATTTATGGGTTATAGC+TGG | 0.467548 | 2.2:-2058558 | MS.gene36331:CDS |
ACTTCAAGTGGAGGAAAAGA+TGG | 0.470588 | 2.2:-2058618 | MS.gene36331:CDS |
TAGTGAAGAAAATGGCTTGA+AGG | 0.470983 | 2.2:-2058304 | MS.gene36331:CDS |
GCAATAAAAGCAGCAACAAC+AGG | 0.471001 | 2.2:+2060996 | None:intergenic |
ATTCTGATAGGAATTGGAAA+TGG | 0.478772 | 2.2:-2059852 | MS.gene36331:CDS |
CTTGCTAGGATGGCAAGTAC+TGG | 0.481516 | 2.2:-2061122 | MS.gene36331:CDS |
TCTGGATTGGCAATGGCTGC+CGG | 0.481828 | 2.2:-2058684 | MS.gene36331:CDS |
TTGTTCCAACTGATAGACTA+AGG | 0.483967 | 2.2:-2059449 | MS.gene36331:intron |
TGAATTCAAGAATGGTGGTC+AGG | 0.484071 | 2.2:-2058346 | MS.gene36331:CDS |
ATTGGTCGATTCCTAGGTGT+TGG | 0.484458 | 2.2:-2060963 | MS.gene36331:CDS |
TAATGAGGCACTTGCTAGGA+TGG | 0.505197 | 2.2:-2061132 | MS.gene36331:CDS |
GTATTATTTAGTATGCAGTT+GGG | 0.508088 | 2.2:-2058514 | MS.gene36331:CDS |
ATCAGTCCGAAGATAAGAAT+GGG | 0.508597 | 2.2:-2058951 | MS.gene36331:CDS |
CTTCTCATATCCTCTGCAGC+TGG | 0.510191 | 2.2:-2061029 | MS.gene36331:CDS |
AAGTTCAAACTTTGAAGTAC+CGG | 0.513148 | 2.2:-2059081 | MS.gene36331:CDS |
CATCAAATACAATATCATGT+TGG | 0.518744 | 2.2:+2061091 | None:intergenic |
GATATAAGCATGAGTGCTGC+TGG | 0.520880 | 2.2:+2059642 | None:intergenic |
TATCAGTCCGAAGATAAGAA+TGG | 0.521040 | 2.2:-2058952 | MS.gene36331:CDS |
ATCTTCGGACTGATACTCAC+TGG | 0.523009 | 2.2:+2058960 | None:intergenic |
AGCACTCTCTGGATTGGCAA+TGG | 0.530645 | 2.2:-2058691 | MS.gene36331:CDS |
AGGCTGCGTAGCTGGGATCA+TGG | 0.530855 | 2.2:+2059950 | None:intergenic |
AACATGATATTGTATTTGAT+GGG | 0.530924 | 2.2:-2061089 | MS.gene36331:CDS |
AAGTAGGAGGCTGCGTAGCT+GGG | 0.540101 | 2.2:+2059943 | None:intergenic |
CAAAGAACCAGCTTGCTCAC+TGG | 0.541714 | 2.2:-2059573 | MS.gene36331:CDS |
CTTTAGCATCAAAGATAAGA+GGG | 0.548696 | 2.2:-2058986 | MS.gene36331:CDS |
CTGATAGGAATTGGAAATGG+TGG | 0.549275 | 2.2:-2059849 | MS.gene36331:CDS |
ATTGAAAACACTACTTCAAG+TGG | 0.549303 | 2.2:-2058630 | MS.gene36331:CDS |
ATTTATTGTTGAACCATCTG+AGG | 0.553024 | 2.2:+2059256 | None:intergenic |
CAATCCACAAATTGATGACA+AGG | 0.554131 | 2.2:-2058406 | MS.gene36331:CDS |
AGTAACATTGCCATTTGACC+TGG | 0.557875 | 2.2:+2059885 | None:intergenic |
ATATAAGTATTACAAAGATA+AGG | 0.558130 | 2.2:+2059039 | None:intergenic |
ATGGTTCAACAATAAATCGT+TGG | 0.560017 | 2.2:-2059250 | MS.gene36331:CDS |
CAGCTAATGAGGCACTTGCT+AGG | 0.560867 | 2.2:-2061136 | MS.gene36331:CDS |
GAGTAGCTGTAGCAAGATGA+AGG | 0.565218 | 2.2:+2061057 | None:intergenic |
ATATCCAAGATCATCTTGGT+TGG | 0.566372 | 2.2:-2059683 | MS.gene36331:CDS |
GGTGGATTGCTGCAAGTAGG+AGG | 0.569731 | 2.2:+2059930 | None:intergenic |
GAGTTAACTGAATTCAAGAA+TGG | 0.573785 | 2.2:-2058354 | MS.gene36331:CDS |
TCAAACTTTGAAGTACCGGC+AGG | 0.576815 | 2.2:-2059077 | MS.gene36331:CDS |
TTGGATACTTGATCAGCTGT+AGG | 0.577217 | 2.2:+2058483 | None:intergenic |
TGCAAAACCAGTGAGCAAGC+TGG | 0.577546 | 2.2:+2059566 | None:intergenic |
GTATATATCCAAGATCATCT+TGG | 0.577864 | 2.2:-2059687 | MS.gene36331:CDS |
TGAAGAAAATGGCTTGAAGG+AGG | 0.581996 | 2.2:-2058301 | MS.gene36331:CDS |
CGAAGATAAGAATGGGACTT+GGG | 0.582353 | 2.2:-2058944 | MS.gene36331:CDS |
GATTTCTGATAATATTAACA+AGG | 0.582713 | 2.2:-2058592 | MS.gene36331:CDS |
AGGATGGCAAGTACTGGACT+TGG | 0.587802 | 2.2:-2061116 | MS.gene36331:CDS |
TAGTGATGAAACTAGTTCAA+AGG | 0.587940 | 2.2:-2058382 | MS.gene36331:CDS |
TGTGAAATTTCCAGCTGCAG+AGG | 0.589353 | 2.2:+2061019 | None:intergenic |
AGAAAGAAAGCAATTCAGGC+AGG | 0.591725 | 2.2:-2058867 | MS.gene36331:CDS |
TTATTAAAGTTATTCCATTG+TGG | 0.594692 | 2.2:-2059187 | MS.gene36331:CDS |
GAGTGAAGAAAATGGTTCCA+AGG | 0.598642 | 2.2:-2058457 | MS.gene36331:CDS |
CTTCAAGTGGAGGAAAAGAT+GGG | 0.602416 | 2.2:-2058617 | MS.gene36331:CDS |
GATACCAATGATAAAAGGCA+TGG | 0.603181 | 2.2:+2061253 | None:intergenic |
GTATACCTTAGTCTATCAGT+TGG | 0.607004 | 2.2:+2059444 | None:intergenic |
GGCTGTATATCAGCAAAACC+AGG | 0.607418 | 2.2:-2059903 | MS.gene36331:CDS |
TGCTATGACAGCTATAGTTG+TGG | 0.614444 | 2.2:+2059725 | None:intergenic |
GAACAAGATATAGCCTCAGA+TGG | 0.621248 | 2.2:-2059269 | MS.gene36331:CDS |
GCTGATATACAGCCTTCAGG+TGG | 0.623699 | 2.2:+2059912 | None:intergenic |
TTAACTGAATTCAAGAATGG+TGG | 0.626429 | 2.2:-2058351 | MS.gene36331:CDS |
AGCAAGAAAGAATAAGACAG+TGG | 0.634801 | 2.2:+2059620 | None:intergenic |
ATTATAGTAAAAGATCCTGC+CGG | 0.635315 | 2.2:+2059062 | None:intergenic |
GAAAACACTACTTCAAGTGG+AGG | 0.636406 | 2.2:-2058627 | MS.gene36331:CDS |
TTATTCCATTGTGGTCAACA+GGG | 0.637429 | 2.2:-2059178 | MS.gene36331:CDS |
ACTTGCAGCAATCCACCTGA+AGG | 0.637785 | 2.2:-2059924 | MS.gene36331:CDS |
ATGATGGTAAAATTCAGGTG+AGG | 0.641850 | 2.2:+2059491 | None:intergenic |
GCGATCCCTGTTGACCACAA+TGG | 0.645059 | 2.2:+2059173 | None:intergenic |
ATTTCTGATAATATTAACAA+GGG | 0.652732 | 2.2:-2058591 | MS.gene36331:CDS |
TCAGGTGGATTGCTGCAAGT+AGG | 0.653513 | 2.2:+2059927 | None:intergenic |
ATACCAGCCAAACAAAGTGA+AGG | 0.655978 | 2.2:+2058792 | None:intergenic |
ATCGCAATGTCAATTAACAT+CGG | 0.666056 | 2.2:-2059155 | MS.gene36331:CDS |
AAACCACAAAGAAGCAAGGG+TGG | 0.667497 | 2.2:-2061284 | MS.gene36331:CDS |
GCAATGTCAATTAACATCGG+AGG | 0.675020 | 2.2:-2059152 | MS.gene36331:CDS |
CAAGTGGAGGAAAAGATGGG+TGG | 0.675884 | 2.2:-2058614 | MS.gene36331:CDS |
TATAGGGAATGTCAATGCTG+TGG | 0.699156 | 2.2:-2059980 | MS.gene36331:intron |
TGAAGAAAATGGTTCCAAGG+AGG | 0.705179 | 2.2:-2058454 | MS.gene36331:CDS |
TAGAACCTATTCCAACACCT+AGG | 0.705760 | 2.2:+2060952 | None:intergenic |
TGTTGAAAATGTCTGCAATG+TGG | 0.749104 | 2.2:-2058821 | MS.gene36331:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGATTAATTAAAGATATATT+AGG | - | chr2.2:2059214-2059233 | MS.gene36331:CDS | 10.0% |
!!! | AATTAATATTCTGAAATTAT+AGG | - | chr2.2:2059590-2059609 | MS.gene36331:CDS | 10.0% |
!! | AATGAATATATAATATTACC+AGG | + | chr2.2:2058730-2058749 | None:intergenic | 15.0% |
!! | ATATAAGTATTACAAAGATA+AGG | + | chr2.2:2060610-2060629 | None:intergenic | 15.0% |
!! | ATATTATTAAGTCCAATTAT+GGG | - | chr2.2:2058813-2058832 | MS.gene36331:CDS | 15.0% |
!! | ATTTCTGATAATATTAACAA+GGG | - | chr2.2:2061055-2061074 | MS.gene36331:CDS | 15.0% |
!! | CTTCTTTCAAAAAAAAAAAA+AGG | + | chr2.2:2058984-2059003 | None:intergenic | 15.0% |
!! | TATGAAAAAGAATCATATAA+AGG | - | chr2.2:2059534-2059553 | MS.gene36331:CDS | 15.0% |
!! | TTATCTTTGTAATACTTATA+TGG | - | chr2.2:2060609-2060628 | MS.gene36331:intron | 15.0% |
!!! | AATTTTCTTTTCTTTTAACT+TGG | + | chr2.2:2059853-2059872 | None:intergenic | 15.0% |
!! | AAACAAACAAACAAAAAAGA+AGG | + | chr2.2:2059641-2059660 | None:intergenic | 20.0% |
!! | AACATGATATTGTATTTGAT+GGG | - | chr2.2:2058557-2058576 | MS.gene36331:CDS | 20.0% |
!! | ACTCGAATATTTAATTGATA+TGG | + | chr2.2:2059430-2059449 | None:intergenic | 20.0% |
!! | ATAGGTATAATGAAAAAAGT+TGG | - | chr2.2:2059608-2059627 | MS.gene36331:CDS | 20.0% |
!! | ATCAAATACAATATCATGTT+GGG | + | chr2.2:2058557-2058576 | None:intergenic | 20.0% |
!! | ATGAAATCAAACGTTTAATA+TGG | + | chr2.2:2060317-2060336 | None:intergenic | 20.0% |
!! | CAATGGAATAACTTTAATAA+TGG | + | chr2.2:2060459-2060478 | None:intergenic | 20.0% |
!! | CATATTATTAAGTCCAATTA+TGG | - | chr2.2:2058812-2058831 | MS.gene36331:CDS | 20.0% |
!! | CTCGAATATTTAATTGATAT+GGG | + | chr2.2:2059429-2059448 | None:intergenic | 20.0% |
!! | GATTTCTGATAATATTAACA+AGG | - | chr2.2:2061054-2061073 | MS.gene36331:CDS | 20.0% |
!! | TATCATGGAAATGAAAAAAA+AGG | + | chr2.2:2058765-2058784 | None:intergenic | 20.0% |
!! | TCATTTCGACAAATATTTAT+GGG | - | chr2.2:2061078-2061097 | MS.gene36331:CDS | 20.0% |
!! | TGAAATCAAACGTTTAATAT+GGG | + | chr2.2:2060316-2060335 | None:intergenic | 20.0% |
!! | TTATTAAAGTTATTCCATTG+TGG | - | chr2.2:2060459-2060478 | MS.gene36331:intron | 20.0% |
!! | TTTATTGCAGATTCTTATAT+TGG | - | chr2.2:2058665-2058684 | MS.gene36331:CDS | 20.0% |
!!! | AAAAGATAAGAAAAGTATCA+TGG | + | chr2.2:2058780-2058799 | None:intergenic | 20.0% |
!!! | AAATAAAGCTTGTGTTATTA+AGG | - | chr2.2:2060349-2060368 | MS.gene36331:intron | 20.0% |
!!! | CTTTATTTTTACTTTGAATG+AGG | - | chr2.2:2058447-2058466 | MS.gene36331:CDS | 20.0% |
!!! | CTTTGTAATAAAACTCATTT+TGG | + | chr2.2:2060904-2060923 | None:intergenic | 20.0% |
!!! | GTTTTTTAATTTTCTTCACT+TGG | - | chr2.2:2060727-2060746 | MS.gene36331:intron | 20.0% |
!!! | TAATTTTAAAAAGGAATCTG+AGG | + | chr2.2:2059494-2059513 | None:intergenic | 20.0% |
!!! | TGAAAGTTTTCTGTTTTTAT+AGG | + | chr2.2:2060122-2060141 | None:intergenic | 20.0% |
!!! | TGTTATTTGAACAAAAATTC+AGG | - | chr2.2:2060273-2060292 | MS.gene36331:intron | 20.0% |
!!! | TTTGTTTGTTTGTTGTTATA+GGG | - | chr2.2:2059650-2059669 | MS.gene36331:CDS | 20.0% |
!!! | TTTTTATGATGGTAAAATTC+AGG | + | chr2.2:2060163-2060182 | None:intergenic | 20.0% |
!!! | TTTTTGCTTATAATAATGAC+CGG | + | chr2.2:2059065-2059084 | None:intergenic | 20.0% |
! | ACAAATATTATTGTAGATCC+AGG | + | chr2.2:2059020-2059039 | None:intergenic | 25.0% |
! | ATACAATTTACTCCCATAAT+TGG | + | chr2.2:2058828-2058847 | None:intergenic | 25.0% |
! | ATATGCAAAAGCTATAAAGA+TGG | + | chr2.2:2060227-2060246 | None:intergenic | 25.0% |
! | CAACATGATATTGTATTTGA+TGG | - | chr2.2:2058556-2058575 | MS.gene36331:CDS | 25.0% |
! | CATCAAATACAATATCATGT+TGG | + | chr2.2:2058558-2058577 | None:intergenic | 25.0% |
! | GATAAGATACCAATGATAAA+AGG | + | chr2.2:2058401-2058420 | None:intergenic | 25.0% |
! | GTATTATTTAGTATGCAGTT+GGG | - | chr2.2:2061132-2061151 | MS.gene36331:CDS | 25.0% |
! | GTCATTTCGACAAATATTTA+TGG | - | chr2.2:2061077-2061096 | MS.gene36331:CDS | 25.0% |
! | TAAGCAAAAATCAACATTCT+AGG | + | chr2.2:2059165-2059184 | None:intergenic | 25.0% |
! | TGTATTATTTAGTATGCAGT+TGG | - | chr2.2:2061131-2061150 | MS.gene36331:CDS | 25.0% |
! | TTCAAGATTAGTGAAGAAAA+TGG | - | chr2.2:2061334-2061353 | MS.gene36331:CDS | 25.0% |
! | TTCTAGGTTCATTCATTAAA+TGG | + | chr2.2:2059149-2059168 | None:intergenic | 25.0% |
!! | AAATATTTATGGGTTATAGC+TGG | - | chr2.2:2061088-2061107 | MS.gene36331:CDS | 25.0% |
!! | GGATTTTTGAATAATACTCA+TGG | - | chr2.2:2060800-2060819 | MS.gene36331:intron | 25.0% |
!! | TGTGTAATTTTCACATAAAG+AGG | + | chr2.2:2060055-2060074 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAATAGTGAC+CGG | - | chr2.2:2059175-2059194 | MS.gene36331:CDS | 25.0% |
!!! | AAACGTTTGATTTCATTTTC+AGG | - | chr2.2:2060321-2060340 | MS.gene36331:intron | 25.0% |
!!! | ATTTCATGTTCTTTAGCTTT+TGG | - | chr2.2:2059821-2059840 | MS.gene36331:CDS | 25.0% |
!!! | GTTTGTTTGTTTGTTGTTAT+AGG | - | chr2.2:2059649-2059668 | MS.gene36331:CDS | 25.0% |
AGAAAGAATCACAAATCAAG+GGG | + | chr2.2:2059325-2059344 | None:intergenic | 30.0% | |
ATCGCAATGTCAATTAACAT+CGG | - | chr2.2:2060491-2060510 | MS.gene36331:intron | 30.0% | |
ATGGTTCAACAATAAATCGT+TGG | - | chr2.2:2060396-2060415 | MS.gene36331:intron | 30.0% | |
ATTATAGTAAAAGATCCTGC+CGG | + | chr2.2:2060587-2060606 | None:intergenic | 30.0% | |
ATTCTGATAGGAATTGGAAA+TGG | - | chr2.2:2059794-2059813 | MS.gene36331:CDS | 30.0% | |
ATTGAAAACACTACTTCAAG+TGG | - | chr2.2:2061016-2061035 | MS.gene36331:CDS | 30.0% | |
ATTTATTGTTGAACCATCTG+AGG | + | chr2.2:2060393-2060412 | None:intergenic | 30.0% | |
CATTCATTAAATGGTGTATG+CGG | + | chr2.2:2059140-2059159 | None:intergenic | 30.0% | |
CTTTAGCATCAAAGATAAGA+GGG | - | chr2.2:2060660-2060679 | MS.gene36331:intron | 30.0% | |
GAACACTTGAATTGAATCTA+TGG | - | chr2.2:2059236-2059255 | MS.gene36331:CDS | 30.0% | |
GAGAAAGAATCACAAATCAA+GGG | + | chr2.2:2059326-2059345 | None:intergenic | 30.0% | |
GAGTTAACTGAATTCAAGAA+TGG | - | chr2.2:2061292-2061311 | MS.gene36331:CDS | 30.0% | |
GTATATATCCAAGATCATCT+TGG | - | chr2.2:2059959-2059978 | MS.gene36331:CDS | 30.0% | |
TAATCATACTTCAATGCAGA+AGG | - | chr2.2:2058929-2058948 | MS.gene36331:CDS | 30.0% | |
TAGTGATGAAACTAGTTCAA+AGG | - | chr2.2:2061264-2061283 | MS.gene36331:CDS | 30.0% | |
TATTACTCCCTCTCTTATAA+AGG | - | chr2.2:2058888-2058907 | MS.gene36331:CDS | 30.0% | |
TGAAATGATATGTCTGTCTA+AGG | + | chr2.2:2060546-2060565 | None:intergenic | 30.0% | |
TGAGAAAGAATCACAAATCA+AGG | + | chr2.2:2059327-2059346 | None:intergenic | 30.0% | |
TTAACTGAATTCAAGAATGG+TGG | - | chr2.2:2061295-2061314 | MS.gene36331:CDS | 30.0% | |
TTCCAAAGCTCTATTGTTAT+TGG | + | chr2.2:2059876-2059895 | None:intergenic | 30.0% | |
TTCCAATAACAATAGAGCTT+TGG | - | chr2.2:2059871-2059890 | MS.gene36331:CDS | 30.0% | |
TTGAATATACGTACCAAGTT+TGG | + | chr2.2:2059572-2059591 | None:intergenic | 30.0% | |
TTTGTGATTCTTTCTCAACT+AGG | - | chr2.2:2059330-2059349 | MS.gene36331:intron | 30.0% | |
! | AGAAGCATATATGTATAACC+TGG | - | chr2.2:2058999-2059018 | MS.gene36331:CDS | 30.0% |
! | ATCTGAAACATAAAGAGAGA+CGG | - | chr2.2:2059281-2059300 | MS.gene36331:CDS | 30.0% |
! | CTTTGGAAATATTCTTCACT+TGG | - | chr2.2:2059888-2059907 | MS.gene36331:CDS | 30.0% |
! | TAAAATTCAGGTGAGGTTTT+CGG | + | chr2.2:2060151-2060170 | None:intergenic | 30.0% |
!! | AAGTTCAAACTTTGAAGTAC+CGG | - | chr2.2:2060565-2060584 | MS.gene36331:intron | 30.0% |
!! | CAGCAATTTTTGAGAGTATA+AGG | - | chr2.2:2060756-2060775 | MS.gene36331:intron | 30.0% |
!!! | GATCTGAGTCTTTTTTATGA+TGG | + | chr2.2:2060174-2060193 | None:intergenic | 30.0% |
AAAAGAAGACACCAAGTTTC+CGG | + | chr2.2:2060984-2061003 | None:intergenic | 35.0% | |
AAGGAGAAAGAAAGCAATTC+AGG | - | chr2.2:2060775-2060794 | MS.gene36331:intron | 35.0% | |
AATATACGTACCAAGTTTGG+TGG | + | chr2.2:2059569-2059588 | None:intergenic | 35.0% | |
AATCTATGGCTAAAGTCTGT+GGG | - | chr2.2:2059250-2059269 | MS.gene36331:CDS | 35.0% | |
ACAAAAACCACAAAGAAGCA+AGG | - | chr2.2:2058358-2058377 | MS.gene36331:CDS | 35.0% | |
AGCAAGAAAGAATAAGACAG+TGG | + | chr2.2:2060029-2060048 | None:intergenic | 35.0% | |
AGGTTCTATTATCAGTTTCC+TGG | - | chr2.2:2058709-2058728 | MS.gene36331:CDS | 35.0% | |
ATATCCAAGATCATCTTGGT+TGG | - | chr2.2:2059963-2059982 | MS.gene36331:CDS | 35.0% | |
ATCAGTCCGAAGATAAGAAT+GGG | - | chr2.2:2060695-2060714 | MS.gene36331:intron | 35.0% | |
ATGATGGTAAAATTCAGGTG+AGG | + | chr2.2:2060158-2060177 | None:intergenic | 35.0% | |
CAAAAACCACAAAGAAGCAA+GGG | - | chr2.2:2058359-2058378 | MS.gene36331:CDS | 35.0% | |
CCTCTTATCTTTGATGCTAA+AGG | + | chr2.2:2060662-2060681 | None:intergenic | 35.0% | |
CCTTTAGCATCAAAGATAAG+AGG | - | chr2.2:2060659-2060678 | MS.gene36331:intron | 35.0% | |
CTAACCTTGTCATCAATTTG+TGG | + | chr2.2:2061247-2061266 | None:intergenic | 35.0% | |
CTCTCTTATAAAGGAACAGA+GGG | - | chr2.2:2058897-2058916 | MS.gene36331:CDS | 35.0% | |
CTCTGTTCCTTTATAAGAGA+GGG | + | chr2.2:2058898-2058917 | None:intergenic | 35.0% | |
GAAAAAAGTTCCACCAAACT+TGG | - | chr2.2:2059556-2059575 | MS.gene36331:CDS | 35.0% | |
GAAACACTAGACATAGTCTT+TGG | + | chr2.2:2060932-2060951 | None:intergenic | 35.0% | |
GATACCAATGATAAAAGGCA+TGG | + | chr2.2:2058396-2058415 | None:intergenic | 35.0% | |
GATCATCTTGGTTGGAAAAT+TGG | - | chr2.2:2059971-2059990 | MS.gene36331:CDS | 35.0% | |
GCGTTAATTCTGATAGGAAT+TGG | - | chr2.2:2059788-2059807 | MS.gene36331:CDS | 35.0% | |
GTATACCTTAGTCTATCAGT+TGG | + | chr2.2:2060205-2060224 | None:intergenic | 35.0% | |
TAGTGAAGAAAATGGCTTGA+AGG | - | chr2.2:2061342-2061361 | MS.gene36331:CDS | 35.0% | |
TATCAGTCCGAAGATAAGAA+TGG | - | chr2.2:2060694-2060713 | MS.gene36331:intron | 35.0% | |
TCCAAAGTGAGTGAAGAAAA+TGG | - | chr2.2:2061181-2061200 | MS.gene36331:intron | 35.0% | |
TGCTTATAATAATGACCGGA+GGG | + | chr2.2:2059061-2059080 | None:intergenic | 35.0% | |
TGTTGAAAATGTCTGCAATG+TGG | - | chr2.2:2060825-2060844 | MS.gene36331:intron | 35.0% | |
TTATTCCATTGTGGTCAACA+GGG | - | chr2.2:2060468-2060487 | MS.gene36331:intron | 35.0% | |
TTGCTTATAATAATGACCGG+AGG | + | chr2.2:2059062-2059081 | None:intergenic | 35.0% | |
TTGTTCCAACTGATAGACTA+AGG | - | chr2.2:2060197-2060216 | MS.gene36331:intron | 35.0% | |
! | ACCATTTTCTTCACTCACTT+TGG | + | chr2.2:2061185-2061204 | None:intergenic | 35.0% |
! | CAATCCACAAATTGATGACA+AGG | - | chr2.2:2061240-2061259 | MS.gene36331:intron | 35.0% |
! | GCTGAAGCATTCAATGTTAT+TGG | - | chr2.2:2060878-2060897 | MS.gene36331:intron | 35.0% |
! | TCTTATATTGGTCGATTCCT+AGG | - | chr2.2:2058677-2058696 | MS.gene36331:CDS | 35.0% |
! | TTCAGTTGAATTTTCCTCCT+TGG | + | chr2.2:2061209-2061228 | None:intergenic | 35.0% |
! | TTTTCCAACCAAGATGATCT+TGG | + | chr2.2:2059970-2059989 | None:intergenic | 35.0% |
!! | CTTGGTTGGAAAATTGGTTT+TGG | - | chr2.2:2059977-2059996 | MS.gene36331:CDS | 35.0% |
!!! | TTTTGTTGTTGCAGCTAATG+AGG | - | chr2.2:2058499-2058518 | MS.gene36331:CDS | 35.0% |
ACTAGGACTCCATATGTCTT+AGG | - | chr2.2:2059347-2059366 | MS.gene36331:intron | 40.0% | |
ACTTCAAGTGGAGGAAAAGA+TGG | - | chr2.2:2061028-2061047 | MS.gene36331:CDS | 40.0% | |
AGAAAGAAAGCAATTCAGGC+AGG | - | chr2.2:2060779-2060798 | MS.gene36331:intron | 40.0% | |
ATACCAGCCAAACAAAGTGA+AGG | + | chr2.2:2060857-2060876 | None:intergenic | 40.0% | |
ATCAGCAAAACCAGGTCAAA+TGG | - | chr2.2:2059751-2059770 | MS.gene36331:CDS | 40.0% | |
CCAAGTCCCATTCTTATCTT+CGG | + | chr2.2:2060704-2060723 | None:intergenic | 40.0% | |
CCTCTCTTATAAAGGAACAG+AGG | - | chr2.2:2058896-2058915 | MS.gene36331:CDS | 40.0% | |
CCTCTGTTCCTTTATAAGAG+AGG | + | chr2.2:2058899-2058918 | None:intergenic | 40.0% | |
CGAAGATAAGAATGGGACTT+GGG | - | chr2.2:2060702-2060721 | MS.gene36331:intron | 40.0% | |
CTCTCTGCGTTAATTCTGAT+AGG | - | chr2.2:2059782-2059801 | MS.gene36331:CDS | 40.0% | |
CTGATAGGAATTGGAAATGG+TGG | - | chr2.2:2059797-2059816 | MS.gene36331:CDS | 40.0% | |
CTTCAAGTGGAGGAAAAGAT+GGG | - | chr2.2:2061029-2061048 | MS.gene36331:CDS | 40.0% | |
GAAAACACTACTTCAAGTGG+AGG | - | chr2.2:2061019-2061038 | MS.gene36331:CDS | 40.0% | |
GAACAAGATATAGCCTCAGA+TGG | - | chr2.2:2060377-2060396 | MS.gene36331:intron | 40.0% | |
GAATCTATGGCTAAAGTCTG+TGG | - | chr2.2:2059249-2059268 | MS.gene36331:CDS | 40.0% | |
GAGTGAAGAAAATGGTTCCA+AGG | - | chr2.2:2061189-2061208 | MS.gene36331:intron | 40.0% | |
GCAATAAAAGCAGCAACAAC+AGG | + | chr2.2:2058653-2058672 | None:intergenic | 40.0% | |
GCAATGTCAATTAACATCGG+AGG | - | chr2.2:2060494-2060513 | MS.gene36331:intron | 40.0% | |
GTTATTCCATTGTGGTCAAC+AGG | - | chr2.2:2060467-2060486 | MS.gene36331:intron | 40.0% | |
GTTGTCTTGCCTAAGACATA+TGG | + | chr2.2:2059359-2059378 | None:intergenic | 40.0% | |
TAGAACCTATTCCAACACCT+AGG | + | chr2.2:2058697-2058716 | None:intergenic | 40.0% | |
TATAGGGAATGTCAATGCTG+TGG | - | chr2.2:2059666-2059685 | MS.gene36331:CDS | 40.0% | |
TCAATATGTTGTACACCCTC+CGG | + | chr2.2:2059197-2059216 | None:intergenic | 40.0% | |
TGAAGAAAATGGCTTGAAGG+AGG | - | chr2.2:2061345-2061364 | MS.gene36331:CDS | 40.0% | |
TGAAGAAAATGGTTCCAAGG+AGG | - | chr2.2:2061192-2061211 | MS.gene36331:intron | 40.0% | |
TGAATTCAAGAATGGTGGTC+AGG | - | chr2.2:2061300-2061319 | MS.gene36331:CDS | 40.0% | |
TGCTATGACAGCTATAGTTG+TGG | + | chr2.2:2059924-2059943 | None:intergenic | 40.0% | |
TGCTGCTGATGAAGAAGAAA+TGG | - | chr2.2:2058328-2058347 | MS.gene36331:CDS | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | - | chr2.2:2059179-2059198 | MS.gene36331:CDS | 40.0% | |
TTAGTATGCAGTTGGGCTTA+TGG | - | chr2.2:2061139-2061158 | MS.gene36331:intron | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | chr2.2:2059178-2059197 | MS.gene36331:CDS | 40.0% | |
TTGGATACTTGATCAGCTGT+AGG | + | chr2.2:2061166-2061185 | None:intergenic | 40.0% | |
TTTGCTGATATACAGCCTTC+AGG | + | chr2.2:2059740-2059759 | None:intergenic | 40.0% | |
! | AGTAACATTGCCATTTGACC+TGG | + | chr2.2:2059764-2059783 | None:intergenic | 40.0% |
! | GTCACCATGCCTTTTATCAT+TGG | - | chr2.2:2058389-2058408 | MS.gene36331:CDS | 40.0% |
AAACCACAAAGAAGCAAGGG+TGG | - | chr2.2:2058362-2058381 | MS.gene36331:CDS | 45.0% | |
AGTGTTTCTTCAGCACTCTC+TGG | - | chr2.2:2060944-2060963 | MS.gene36331:CDS | 45.0% | |
ATCTTCGGACTGATACTCAC+TGG | + | chr2.2:2060689-2060708 | None:intergenic | 45.0% | |
ATTAACATCGGAGGCTCGTT+TGG | - | chr2.2:2060503-2060522 | MS.gene36331:intron | 45.0% | |
CAACAACAACATACACCCTC+CGG | - | chr2.2:2059043-2059062 | MS.gene36331:CDS | 45.0% | |
CCGAAGATAAGAATGGGACT+TGG | - | chr2.2:2060701-2060720 | MS.gene36331:intron | 45.0% | |
GAGTAGCTGTAGCAAGATGA+AGG | + | chr2.2:2058592-2058611 | None:intergenic | 45.0% | |
GCTGTCATAGCAGCTCTATT+TGG | - | chr2.2:2059932-2059951 | MS.gene36331:CDS | 45.0% | |
GCTTGCACCTTCACTTTGTT+TGG | - | chr2.2:2060847-2060866 | MS.gene36331:intron | 45.0% | |
GGCTGTATATCAGCAAAACC+AGG | - | chr2.2:2059743-2059762 | MS.gene36331:CDS | 45.0% | |
TGTGAAATTTCCAGCTGCAG+AGG | + | chr2.2:2058630-2058649 | None:intergenic | 45.0% | |
TTCTTCAGCACTCTCTGGAT+TGG | - | chr2.2:2060949-2060968 | MS.gene36331:CDS | 45.0% | |
! | AATTCAGGTGAGGTTTTCGG+TGG | + | chr2.2:2060148-2060167 | None:intergenic | 45.0% |
! | ATTGGTCGATTCCTAGGTGT+TGG | - | chr2.2:2058683-2058702 | MS.gene36331:CDS | 45.0% |
! | GATATAAGCATGAGTGCTGC+TGG | + | chr2.2:2060007-2060026 | None:intergenic | 45.0% |
! | TAATGAGGCACTTGCTAGGA+TGG | - | chr2.2:2058514-2058533 | MS.gene36331:CDS | 45.0% |
!! | CGATTCCTAGGTGTTGGAAT+AGG | - | chr2.2:2058689-2058708 | MS.gene36331:CDS | 45.0% |
!! | TCAAACTTTGAAGTACCGGC+AGG | - | chr2.2:2060569-2060588 | MS.gene36331:intron | 45.0% |
!!! | ATCATTTTTTAATTTTAAAA+AGG | + | chr2.2:2059503-2059522 | None:intergenic | 5.0% |
!!! | TAATATTATATATTCATTTT+TGG | - | chr2.2:2058732-2058751 | MS.gene36331:CDS | 5.0% |
ACTTGCAGCAATCCACCTGA+AGG | - | chr2.2:2059722-2059741 | MS.gene36331:CDS | 50.0% | |
AGACCACCCTTGCTTCTTTG+TGG | + | chr2.2:2058368-2058387 | None:intergenic | 50.0% | |
CAAGTGGAGGAAAAGATGGG+TGG | - | chr2.2:2061032-2061051 | MS.gene36331:CDS | 50.0% | |
CTTCTCATATCCTCTGCAGC+TGG | - | chr2.2:2058617-2058636 | MS.gene36331:CDS | 50.0% | |
CTTGCTAGGATGGCAAGTAC+TGG | - | chr2.2:2058524-2058543 | MS.gene36331:CDS | 50.0% | |
GCTGATATACAGCCTTCAGG+TGG | + | chr2.2:2059737-2059756 | None:intergenic | 50.0% | |
TGCAAAACCAGTGAGCAAGC+TGG | + | chr2.2:2060083-2060102 | None:intergenic | 50.0% | |
! | CAAAGAACCAGCTTGCTCAC+TGG | - | chr2.2:2060073-2060092 | MS.gene36331:intron | 50.0% |
! | CAGCTAATGAGGCACTTGCT+AGG | - | chr2.2:2058510-2058529 | MS.gene36331:CDS | 50.0% |
! | GCACCTTCACTTTGTTTGGC+TGG | - | chr2.2:2060851-2060870 | MS.gene36331:intron | 50.0% |
!! | AGCACTCTCTGGATTGGCAA+TGG | - | chr2.2:2060955-2060974 | MS.gene36331:CDS | 50.0% |
!! | AGGATGGCAAGTACTGGACT+TGG | - | chr2.2:2058530-2058549 | MS.gene36331:CDS | 50.0% |
!! | TCAGGTGGATTGCTGCAAGT+AGG | + | chr2.2:2059722-2059741 | None:intergenic | 50.0% |
AAGTAGGAGGCTGCGTAGCT+GGG | + | chr2.2:2059706-2059725 | None:intergenic | 55.0% | |
GCGATCCCTGTTGACCACAA+TGG | + | chr2.2:2060476-2060495 | None:intergenic | 55.0% | |
!! | GGTGGATTGCTGCAAGTAGG+AGG | + | chr2.2:2059719-2059738 | None:intergenic | 55.0% |
!! | TCTGGATTGGCAATGGCTGC+CGG | - | chr2.2:2060962-2060981 | MS.gene36331:CDS | 55.0% |
AGGCTGCGTAGCTGGGATCA+TGG | + | chr2.2:2059699-2059718 | None:intergenic | 60.0% | |
CAAGTAGGAGGCTGCGTAGC+TGG | + | chr2.2:2059707-2059726 | None:intergenic | 60.0% | |
GGCAATGGCTGCCGGAAACT+TGG | - | chr2.2:2060970-2060989 | MS.gene36331:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 2058296 | 2061372 | 2058296 | ID=MS.gene36331 |
chr2.2 | mRNA | 2058296 | 2061372 | 2058296 | ID=MS.gene36331.t1;Parent=MS.gene36331 |
chr2.2 | exon | 2061258 | 2061372 | 2061258 | ID=MS.gene36331.t1.exon1;Parent=MS.gene36331.t1 |
chr2.2 | CDS | 2061258 | 2061372 | 2061258 | ID=cds.MS.gene36331.t1;Parent=MS.gene36331.t1 |
chr2.2 | exon | 2060938 | 2061155 | 2060938 | ID=MS.gene36331.t1.exon2;Parent=MS.gene36331.t1 |
chr2.2 | CDS | 2060938 | 2061155 | 2060938 | ID=cds.MS.gene36331.t1;Parent=MS.gene36331.t1 |
chr2.2 | exon | 2059450 | 2059997 | 2059450 | ID=MS.gene36331.t1.exon3;Parent=MS.gene36331.t1 |
chr2.2 | CDS | 2059450 | 2059997 | 2059450 | ID=cds.MS.gene36331.t1;Parent=MS.gene36331.t1 |
chr2.2 | exon | 2058296 | 2059325 | 2058296 | ID=MS.gene36331.t1.exon4;Parent=MS.gene36331.t1 |
chr2.2 | CDS | 2058296 | 2059325 | 2058296 | ID=cds.MS.gene36331.t1;Parent=MS.gene36331.t1 |
Gene Sequence |
Protein sequence |