AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene037668

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037668.t1 MTR_4g019580 97.302 593 16 0 1 593 1 593 0.0 1196
MS.gene037668.t1 MTR_7g065080 75.804 591 133 3 4 593 2 583 0.0 952
MS.gene037668.t1 MTR_7g065080 75.299 502 117 2 93 593 1 496 0.0 806
MS.gene037668.t1 MTR_3g069500 61.499 587 214 6 1 586 1 576 0.0 754
MS.gene037668.t1 MTR_3g069420 57.458 590 242 5 1 586 1 585 0.0 717
MS.gene037668.t1 MTR_3g069440 60.035 573 222 4 19 587 16 585 0.0 713
MS.gene037668.t1 MTR_7g098200 42.857 574 307 9 8 570 5 568 7.02e-159 468
MS.gene037668.t1 MTR_7g098200 42.308 572 303 8 8 570 5 558 1.02e-155 459
MS.gene037668.t1 MTR_7g067010 41.062 565 325 6 16 574 4 566 1.16e-153 453
MS.gene037668.t1 MTR_8g038880 40.813 566 299 6 38 590 22 564 5.89e-153 452
MS.gene037668.t1 MTR_4g015080 40.941 574 331 6 6 573 4 575 1.47e-152 451
MS.gene037668.t1 MTR_7g098180 41.327 588 325 10 16 590 11 591 3.91e-152 451
MS.gene037668.t1 MTR_7g098160 40.415 579 325 11 9 574 6 577 5.88e-152 450
MS.gene037668.t1 MTR_7g098040 41.259 572 317 10 9 568 7 571 8.63e-152 450
MS.gene037668.t1 MTR_3g462710 40.603 564 327 6 13 569 1 563 6.20e-151 446
MS.gene037668.t1 MTR_7g098220 41.522 578 316 10 9 574 6 573 1.07e-147 439
MS.gene037668.t1 MTR_7g098090 40.381 577 320 10 9 568 6 575 1.40e-147 439
MS.gene037668.t1 MTR_3g014790 40.035 572 290 7 26 570 3 548 5.36e-147 436
MS.gene037668.t1 MTR_4g033325 40.681 558 302 7 20 570 15 550 1.03e-146 435
MS.gene037668.t1 MTR_4g033315 40.108 556 306 6 22 570 17 552 3.89e-144 429
MS.gene037668.t1 MTR_4g033310 40.108 556 306 6 22 570 17 552 3.89e-144 429
MS.gene037668.t1 MTR_3g072300 38.070 570 343 5 13 575 1 567 5.68e-144 429
MS.gene037668.t1 MTR_7g098230 43.045 532 286 8 50 570 40 565 6.51e-144 429
MS.gene037668.t1 MTR_3g112460 40.000 565 320 9 20 578 7 558 1.84e-142 425
MS.gene037668.t1 MTR_1g042310 37.919 567 337 8 13 569 3 564 4.03e-142 425
MS.gene037668.t1 MTR_0294s0020 40.215 557 302 7 22 570 17 550 4.07e-142 423
MS.gene037668.t1 MTR_3g005010 40.248 564 293 9 22 573 16 547 1.68e-141 421
MS.gene037668.t1 MTR_1g075440 38.220 573 334 9 9 569 2 566 1.83e-141 423
MS.gene037668.t1 MTR_3g112470 40.426 564 319 9 20 578 7 558 2.24e-141 422
MS.gene037668.t1 MTR_1g041875 40.000 540 308 9 17 549 10 540 5.26e-139 416
MS.gene037668.t1 MTR_1g041815 39.755 571 326 10 9 569 2 564 3.53e-138 414
MS.gene037668.t1 MTR_7g098220 42.135 534 290 8 53 574 3 529 4.12e-138 413
MS.gene037668.t1 MTR_1g041835 39.229 571 329 10 9 569 2 564 4.32e-137 411
MS.gene037668.t1 MTR_4g033330 39.479 537 298 6 22 551 17 533 8.35e-135 404
MS.gene037668.t1 MTR_1g042310 38.710 527 308 8 53 569 6 527 7.31e-133 400
MS.gene037668.t1 MTR_3g112450 38.569 573 322 11 20 585 7 556 2.01e-131 396
MS.gene037668.t1 MTR_1g042310 38.476 525 308 8 55 569 1 520 2.60e-131 395
MS.gene037668.t1 MTR_4g033395 40.200 500 270 6 22 513 18 496 4.89e-129 388
MS.gene037668.t1 MTR_4g033375 38.856 507 285 7 13 513 9 496 2.95e-128 386
MS.gene037668.t1 MTR_1g041885 39.841 502 286 9 55 549 1 493 2.02e-127 385
MS.gene037668.t1 MTR_5g012270 36.673 559 336 8 26 570 19 573 2.36e-125 381
MS.gene037668.t1 MTR_4g101380 37.722 562 329 9 26 570 17 574 7.56e-124 378
MS.gene037668.t1 MTR_5g055000 35.957 559 344 9 25 572 8 563 5.02e-122 373
MS.gene037668.t1 MTR_7g098150 42.794 451 243 8 9 451 6 449 4.53e-121 367
MS.gene037668.t1 MTR_7g098200 42.609 460 247 8 122 570 1 454 8.76e-121 366
MS.gene037668.t1 MTR_5g038060 37.636 550 328 6 34 569 29 577 1.82e-119 367
MS.gene037668.t1 MTR_5g012290 38.137 569 329 11 18 570 10 571 6.54e-119 365
MS.gene037668.t1 MTR_7g010820 35.979 567 347 7 22 574 12 576 1.68e-117 361
MS.gene037668.t1 MTR_5g014150 34.072 587 369 10 1 572 6 589 1.24e-116 359
MS.gene037668.t1 MTR_7g005930 33.803 568 357 10 28 586 27 584 5.46e-115 355
MS.gene037668.t1 MTR_3g462710 40.132 456 265 6 122 570 1 455 6.84e-115 350
MS.gene037668.t1 MTR_4g033325 39.387 457 248 7 121 570 18 452 7.81e-114 347
MS.gene037668.t1 MTR_1g116930 34.955 555 348 10 38 587 25 571 6.67e-112 347
MS.gene037668.t1 MTR_7g088825 34.783 552 346 7 34 573 20 569 8.71e-112 347
MS.gene037668.t1 MTR_5g085850 36.192 583 337 10 7 578 7 565 1.81e-111 345
MS.gene037668.t1 MTR_4g033325 38.702 447 245 7 131 570 2 426 8.74e-111 338
MS.gene037668.t1 MTR_4g098800 32.884 593 380 10 3 585 70 654 2.07e-110 345
MS.gene037668.t1 MTR_7g111260 36.447 546 331 9 34 574 17 551 2.12e-110 343
MS.gene037668.t1 MTR_4g098800 32.653 588 379 10 9 585 8 589 4.27e-110 342
MS.gene037668.t1 MTR_4g114340 37.213 567 340 8 13 570 1 560 5.21e-110 341
MS.gene037668.t1 MTR_1g085090 35.165 546 338 8 34 574 17 551 6.62e-109 339
MS.gene037668.t1 MTR_8g469470 34.370 579 356 10 9 570 11 582 1.35e-108 338
MS.gene037668.t1 MTR_8g469480 35.455 550 338 7 39 573 41 588 1.58e-108 338
MS.gene037668.t1 MTR_2g017750 33.163 588 372 6 12 578 10 597 2.76e-108 338
MS.gene037668.t1 MTR_4g033385 38.344 459 253 7 121 570 16 453 3.45e-108 333
MS.gene037668.t1 MTR_7g088790 33.959 586 368 8 13 586 7 585 2.49e-107 335
MS.gene037668.t1 MTR_7g088820 33.042 572 367 8 14 573 5 572 1.95e-106 333
MS.gene037668.t1 MTR_4g107510 32.650 585 361 10 2 570 18 585 3.10e-106 332
MS.gene037668.t1 MTR_4g107580 33.966 580 362 11 12 574 3 578 3.35e-106 332
MS.gene037668.t1 MTR_4g123537 35.678 583 350 13 1 570 1 571 3.87e-105 330
MS.gene037668.t1 MTR_7g013270 33.570 563 360 10 28 581 82 639 9.32e-105 330
MS.gene037668.t1 MTR_4g107530 33.663 606 370 13 7 590 8 603 2.34e-104 328
MS.gene037668.t1 MTR_7g006540 33.333 555 346 9 35 569 62 612 2.50e-104 328
MS.gene037668.t1 MTR_2g005130 33.157 567 353 12 10 569 16 563 4.03e-104 327
MS.gene037668.t1 MTR_8g087780 33.979 568 355 8 22 569 7 574 5.47e-103 323
MS.gene037668.t1 MTR_8g087810 34.974 569 349 7 22 569 7 575 6.60e-103 323
MS.gene037668.t1 MTR_4g107670 32.586 580 355 10 20 574 8 576 9.37e-103 323
MS.gene037668.t1 MTR_6g008690 34.470 557 313 11 42 574 13 541 1.55e-101 318
MS.gene037668.t1 MTR_4g107610 36.296 540 330 10 38 566 33 569 7.91e-101 318
MS.gene037668.t1 MTR_7g088820 33.529 510 325 6 76 573 3 510 1.40e-99 313
MS.gene037668.t1 MTR_3g100980 33.633 556 346 8 38 581 18 562 1.82e-98 311
MS.gene037668.t1 MTR_5g038380 32.302 582 365 7 12 573 6 578 1.34e-96 306
MS.gene037668.t1 MTR_8g103233 34.182 550 341 13 38 573 19 561 5.93e-96 305
MS.gene037668.t1 MTR_8g469310 32.709 587 357 11 12 574 4 576 1.46e-94 301
MS.gene037668.t1 MTR_5g038190 30.851 564 376 9 18 569 7 568 6.25e-94 300
MS.gene037668.t1 MTR_7g098210 36.364 528 239 12 55 570 1 443 2.19e-93 294
MS.gene037668.t1 MTR_3g100980 32.021 584 346 9 38 581 18 590 2.94e-92 296
MS.gene037668.t1 MTR_7g064780 30.102 588 393 9 14 586 4 588 1.51e-91 294
MS.gene037668.t1 MTR_7g088820 33.836 464 293 6 122 573 1 462 3.74e-89 284
MS.gene037668.t1 MTR_2g101650 31.293 588 369 15 1 572 1 569 5.95e-88 284
MS.gene037668.t1 MTR_7g064800 31.338 568 369 10 34 587 24 584 4.55e-87 282
MS.gene037668.t1 MTR_1g026740 31.376 545 348 10 38 566 19 553 2.61e-86 279
MS.gene037668.t1 MTR_7g051880 31.884 552 334 10 21 566 10 525 2.48e-85 275
MS.gene037668.t1 MTR_4g024930 30.998 571 370 12 1 566 1 552 7.55e-85 276
MS.gene037668.t1 MTR_1g009200 31.634 569 358 12 38 588 29 584 1.74e-84 275
MS.gene037668.t1 MTR_1g057460 33.146 534 323 13 45 566 53 564 5.89e-83 271
MS.gene037668.t1 MTR_4g011280 30.769 598 378 17 1 578 1 582 5.65e-82 269
MS.gene037668.t1 MTR_7g052600 31.261 547 344 7 21 566 10 525 4.18e-81 265
MS.gene037668.t1 MTR_1g057460 32.877 511 317 12 64 566 1 493 1.10e-80 263
MS.gene037668.t1 MTR_2g101640 31.059 557 363 12 45 586 32 582 1.72e-80 266
MS.gene037668.t1 MTR_2g101590 32.176 547 346 14 45 573 35 574 1.59e-79 263
MS.gene037668.t1 MTR_1g026770 30.855 538 359 7 38 566 17 550 3.93e-79 260
MS.gene037668.t1 MTR_2g101610 31.218 583 371 16 13 573 1 575 1.90e-77 258
MS.gene037668.t1 MTR_0236s0050 32.427 515 314 13 64 566 1 493 3.74e-77 253
MS.gene037668.t1 MTR_1g026750 30.072 552 360 10 31 566 13 554 4.65e-77 255
MS.gene037668.t1 MTR_7g051830 30.657 548 344 8 22 566 11 525 5.57e-77 254
MS.gene037668.t1 MTR_2g093640 31.041 567 354 11 20 571 5 549 4.94e-76 252
MS.gene037668.t1 MTR_2g093160 30.906 563 360 12 20 571 5 549 1.72e-74 248
MS.gene037668.t1 MTR_2g093180 30.973 565 358 12 20 571 5 550 3.21e-72 242
MS.gene037668.t1 MTR_2g101560 30.466 558 365 11 45 586 36 586 1.06e-71 243
MS.gene037668.t1 MTR_4g033310 39.024 287 165 3 289 570 207 488 8.81e-70 234
MS.gene037668.t1 MTR_4g033310 50.282 177 80 1 22 198 17 185 6.78e-49 177
MS.gene037668.t1 MTR_1g009170 28.571 441 230 13 160 586 9 378 3.52e-44 162
MS.gene037668.t1 MTR_3g065350 39.490 157 91 2 341 497 1 153 3.33e-30 116
MS.gene037668.t1 MTR_4g033390 44.828 87 47 1 485 570 30 116 1.68e-23 96.7
MS.gene037668.t1 MTR_8g091265 33.333 111 62 4 303 405 3 109 1.99e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene037668.t1 AT2G37900 66.667 561 178 5 14 572 16 569 0.0 788
MS.gene037668.t1 AT3G53960 62.585 588 212 6 1 581 1 587 0.0 783
MS.gene037668.t1 AT2G37900 65.927 496 160 5 79 572 2 490 0.0 687
MS.gene037668.t1 AT3G54140 40.860 558 322 5 19 569 7 563 5.79e-153 452
MS.gene037668.t1 AT3G54140 40.860 558 322 5 19 569 7 563 5.79e-153 452
MS.gene037668.t1 AT5G01180 40.351 570 331 6 14 576 3 570 4.03e-151 447
MS.gene037668.t1 AT5G01180 40.351 570 331 6 14 576 3 570 4.03e-151 447
MS.gene037668.t1 AT5G01180 40.351 570 331 6 14 576 3 570 4.03e-151 447
MS.gene037668.t1 AT2G40460 40.893 560 313 7 19 570 7 556 7.53e-148 439
MS.gene037668.t1 AT3G54450 36.555 569 327 5 34 591 10 555 1.42e-145 432
MS.gene037668.t1 AT2G02040 40.244 574 333 7 9 573 13 585 1.32e-144 431
MS.gene037668.t1 AT1G62200 40.630 571 321 7 12 570 24 588 1.50e-141 423
MS.gene037668.t1 AT5G46040 38.681 561 328 7 19 569 10 564 1.22e-138 416
MS.gene037668.t1 AT1G72125 39.643 560 310 9 24 572 17 559 7.08e-137 410
MS.gene037668.t1 AT5G46050 37.943 564 328 8 19 569 10 564 7.06e-136 408
MS.gene037668.t1 AT1G62200 38.833 600 320 9 12 570 24 617 3.08e-135 408
MS.gene037668.t1 AT1G62200 38.833 600 320 9 12 570 38 631 7.04e-135 407
MS.gene037668.t1 AT1G22540 36.953 571 335 6 11 574 5 557 5.97e-131 395
MS.gene037668.t1 AT1G72120 38.287 572 322 10 12 573 6 556 2.28e-129 391
MS.gene037668.t1 AT1G22550 39.583 576 315 10 14 573 5 563 8.95e-129 389
MS.gene037668.t1 AT2G02020 37.500 576 317 8 2 571 7 545 1.12e-128 389
MS.gene037668.t1 AT1G72130 38.727 550 297 11 28 569 16 533 8.50e-126 381
MS.gene037668.t1 AT1G72140 36.364 561 314 8 24 570 22 553 2.50e-123 375
MS.gene037668.t1 AT1G22570 37.589 564 321 7 24 573 18 564 4.06e-119 365
MS.gene037668.t1 AT1G12110 37.814 558 330 10 26 570 17 570 3.97e-117 360
MS.gene037668.t1 AT2G26690 37.857 560 331 8 13 563 1 552 4.91e-117 360
MS.gene037668.t1 AT1G59740 35.750 593 358 13 2 578 3 588 2.39e-116 358
MS.gene037668.t1 AT1G68570 37.153 541 326 8 45 572 32 571 4.82e-116 358
MS.gene037668.t1 AT1G32450 34.163 603 373 12 4 586 8 606 6.55e-116 358
MS.gene037668.t1 AT1G68570 36.989 538 325 8 48 572 5 541 4.70e-115 354
MS.gene037668.t1 AT1G18880 38.069 549 322 8 39 571 22 568 2.63e-113 350
MS.gene037668.t1 AT2G02020 35.875 577 304 10 2 571 7 524 1.23e-112 347
MS.gene037668.t1 AT1G69870 35.359 543 339 6 38 569 53 594 1.86e-111 347
MS.gene037668.t1 AT1G22570 37.338 541 308 7 47 573 4 527 2.74e-111 343
MS.gene037668.t1 AT1G33440 35.559 599 355 13 7 587 9 594 1.37e-110 343
MS.gene037668.t1 AT2G26690 38.740 524 304 8 49 563 4 519 2.83e-109 338
MS.gene037668.t1 AT5G13400 33.932 557 348 8 35 574 63 616 1.72e-108 339
MS.gene037668.t1 AT3G21670 35.739 568 340 8 22 578 15 568 2.03e-108 338
MS.gene037668.t1 AT5G14940 33.993 556 330 10 38 574 9 546 2.27e-108 336
MS.gene037668.t1 AT2G26690 38.327 514 300 8 59 563 2 507 1.34e-105 328
MS.gene037668.t1 AT5G46050 39.002 441 247 8 122 549 1 432 3.42e-105 325
MS.gene037668.t1 AT4G21680 33.096 562 360 7 21 568 13 572 6.77e-102 321
MS.gene037668.t1 AT5G62680 34.477 554 343 9 40 575 47 598 8.90e-102 321
MS.gene037668.t1 AT5G19640 31.315 578 364 11 21 590 44 596 1.17e-101 321
MS.gene037668.t1 AT1G27040 35.179 560 344 9 18 568 11 560 5.45e-101 318
MS.gene037668.t1 AT1G27040 35.179 560 344 9 18 568 7 556 9.66e-101 317
MS.gene037668.t1 AT1G69860 34.683 568 349 10 13 573 1 553 3.13e-100 315
MS.gene037668.t1 AT3G01350 32.804 567 340 10 34 574 5 556 4.39e-100 315
MS.gene037668.t1 AT1G27080 34.539 553 341 9 28 569 6 548 1.39e-98 311
MS.gene037668.t1 AT1G69850 33.448 583 360 11 12 570 2 580 9.68e-98 310
MS.gene037668.t1 AT1G27040 35.660 530 324 8 48 568 7 528 2.64e-96 305
MS.gene037668.t1 AT3G47960 32.844 545 350 8 40 569 65 608 3.05e-96 307
MS.gene037668.t1 AT1G72130 37.269 432 239 8 145 569 9 415 5.07e-95 297
MS.gene037668.t1 AT1G72130 37.269 432 239 8 145 569 9 415 5.07e-95 297
MS.gene037668.t1 AT5G28470 30.769 546 368 7 33 570 14 557 1.65e-93 298
MS.gene037668.t1 AT5G28470 30.952 546 365 8 33 570 14 555 1.94e-92 295
MS.gene037668.t1 AT1G27080 35.078 516 314 9 65 569 1 506 2.58e-92 294
MS.gene037668.t1 AT3G25260 32.721 544 324 10 26 566 11 515 7.20e-91 290
MS.gene037668.t1 AT5G62730 30.822 584 362 10 2 572 34 588 1.22e-88 286
MS.gene037668.t1 AT1G52190 30.939 543 348 10 45 566 30 566 5.68e-88 285
MS.gene037668.t1 AT3G25280 31.712 555 344 8 13 566 1 521 1.78e-86 278
MS.gene037668.t1 AT3G16180 31.439 563 360 11 34 576 21 577 4.85e-86 279
MS.gene037668.t1 AT5G62730 31.250 544 344 9 42 572 3 529 7.10e-86 277
MS.gene037668.t1 AT3G45650 31.053 570 355 10 14 574 8 548 2.33e-85 276
MS.gene037668.t1 AT3G45650 30.034 596 353 12 14 574 8 574 4.60e-80 263
MS.gene037668.t1 AT3G45720 29.596 544 357 9 45 581 28 552 8.31e-80 262
MS.gene037668.t1 AT3G45680 29.596 544 358 8 38 574 22 547 9.13e-80 262
MS.gene037668.t1 AT3G45660 30.926 540 339 9 45 573 30 546 1.51e-79 261
MS.gene037668.t1 AT3G45660 30.926 540 339 9 45 573 30 546 1.51e-79 261
MS.gene037668.t1 AT3G45660 30.926 540 339 9 45 573 51 567 2.42e-79 261
MS.gene037668.t1 AT3G45710 27.971 547 364 9 38 574 23 549 3.04e-75 250
MS.gene037668.t1 AT3G45700 29.705 542 354 10 38 574 18 537 3.85e-73 244
MS.gene037668.t1 AT3G45690 29.682 566 330 14 12 574 4 504 2.16e-69 233
MS.gene037668.t1 AT5G11570 27.048 525 310 10 45 566 22 476 1.22e-51 185
MS.gene037668.t1 AT2G38100 27.203 522 346 10 64 578 2 496 4.29e-50 181
MS.gene037668.t1 AT2G38100 27.203 522 346 10 64 578 24 518 1.02e-49 181
MS.gene037668.t1 AT2G38100 27.203 522 346 10 64 578 18 512 1.19e-49 180

Find 107 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTAAAGTAAATATCCAAAT+TGG 0.190297 4.3:-79262803 None:intergenic
GCGCCACAGTTTCTAATTAT+TGG 0.194463 4.3:+79263169 MS.gene037668:CDS
TCCTATTGATATTAAATATA+TGG 0.243211 4.3:-79261614 None:intergenic
TACAATTGAGTTGGATTAGA+AGG 0.268480 4.3:-79261970 None:intergenic
AAACCTTCTTTAGAGAGTTT+TGG 0.270631 4.3:+79261649 MS.gene037668:CDS
AAATACTTACTTGAGTTTCT+TGG 0.273493 4.3:-79262040 None:intergenic
CTTTGTAGTGGACTCATTCT+TGG 0.273832 4.3:+79261748 MS.gene037668:CDS
ATTTACACTATTTCCGCTAT+TGG 0.282026 4.3:+79262926 MS.gene037668:CDS
TGATCAACATGATCCCAATT+TGG 0.289659 4.3:+79262789 MS.gene037668:CDS
GATTCTTCATTGGATTATAA+TGG 0.294304 4.3:+79258236 MS.gene037668:CDS
TCAATTGTATGAAGTTTCTA+AGG 0.298318 4.3:+79261984 MS.gene037668:CDS
CCCAAGCTTCTCATTGAATC+AGG 0.322169 4.3:-79263247 None:intergenic
CAGTTTCTAATTATTGGTTT+TGG 0.332505 4.3:+79263175 MS.gene037668:CDS
GGACTTTACCTTAGTGTGAT+TGG 0.337959 4.3:+79263274 MS.gene037668:CDS
TGGTCTTGCTTACTCTATCA+TGG 0.339480 4.3:+79261509 MS.gene037668:CDS
ATTCTTCAAAGGATTGGTAT+TGG 0.349309 4.3:+79263031 MS.gene037668:CDS
GGGGAATAATGGAAGACTTT+TGG 0.350504 4.3:+79262011 MS.gene037668:CDS
AACAATGATAGTAGCAGCTT+TGG 0.355709 4.3:+79263072 MS.gene037668:CDS
TGGATATTTACTTTACCATT+TGG 0.360568 4.3:+79262809 MS.gene037668:CDS
CATTCCTAACTGCTGTCTTA+AGG 0.364121 4.3:-79260656 None:intergenic
TTCATGCATCATTTATCTCT+TGG 0.369533 4.3:+79260770 MS.gene037668:CDS
ATGTACAAGATCATGTGAAT+TGG 0.376986 4.3:+79261788 MS.gene037668:CDS
TCTAAGGCTGAGGGGAATAA+TGG 0.379239 4.3:+79262000 MS.gene037668:CDS
GGATAAATTCTACTGGCTAT+TGG 0.379816 4.3:+79263399 MS.gene037668:CDS
TCAATGAGAAGCTTGGGAAT+TGG 0.382984 4.3:+79263253 MS.gene037668:CDS
ATGGGTTCATGATTCTTCAT+TGG 0.383128 4.3:+79258226 MS.gene037668:CDS
TGAGTTGGATTAGAAGGATA+AGG 0.392301 4.3:-79261964 None:intergenic
AGGTTGATAATGAGATGAAA+TGG 0.394771 4.3:+79258207 MS.gene037668:CDS
TGTACAAGATCATGTGAATT+GGG 0.405068 4.3:+79261789 MS.gene037668:CDS
CAAAGGATTGGTATTGGAAT+GGG 0.410381 4.3:+79263037 MS.gene037668:CDS
GGCGACGGTTTGGCGCTTGT+TGG 0.415317 4.3:+79263196 MS.gene037668:CDS
AGATTTGAATAGTAGTCGTT+TGG 0.415547 4.3:+79263378 MS.gene037668:CDS
AGTGAAAGGCTTAGCTACTT+TGG 0.417278 4.3:+79260585 MS.gene037668:CDS
GTTGTTGCTGATTGCTATGA+TGG 0.417799 4.3:+79263499 MS.gene037668:CDS
AAGAGTGATGATGGTGGAGC+AGG 0.423866 4.3:+79263523 MS.gene037668:CDS
CCTGATTCAATGAGAAGCTT+GGG 0.425140 4.3:+79263247 MS.gene037668:CDS
ATTACCTTGTTTGATAAAGA+AGG 0.425512 4.3:-79262855 None:intergenic
AACACTTCATGAATCTTCCT+TGG 0.430465 4.3:-79261580 None:intergenic
ATTCTTAGCTGATTCATACT+TGG 0.447911 4.3:+79260725 MS.gene037668:CDS
GGAGTCAAAGGGCTTCCATT+TGG 0.450283 4.3:-79261898 None:intergenic
GAAACTTCATACAATTGAGT+TGG 0.451518 4.3:-79261979 None:intergenic
TCCTGATTCAATGAGAAGCT+TGG 0.453595 4.3:+79263246 MS.gene037668:CDS
TCCGAGCTTCAACTGGTGCT+TGG 0.454288 4.3:+79258270 MS.gene037668:CDS
GTTCCTCTCCGAGCTTCAAC+TGG 0.455472 4.3:+79258263 MS.gene037668:CDS
GTGACTGTTGCTAGTTTCCA+TGG 0.455808 4.3:-79262743 None:intergenic
GTAAAGTAAATATCCAAATT+GGG 0.462033 4.3:-79262802 None:intergenic
TTCTCATTGAATCAGGAACT+TGG 0.466633 4.3:-79263240 None:intergenic
ATGAACATTCTTCAAAGGAT+TGG 0.469064 4.3:+79263025 MS.gene037668:CDS
TTCTTAGCTGATTCATACTT+GGG 0.473425 4.3:+79260726 MS.gene037668:CDS
TCAAAGGATTGGTATTGGAA+TGG 0.474373 4.3:+79263036 MS.gene037668:CDS
CAGTTAGGAATGTGAACTAT+TGG 0.482220 4.3:+79260667 MS.gene037668:CDS
GTCGTTTGGATAAATTCTAC+TGG 0.482863 4.3:+79263392 MS.gene037668:CDS
AGAGTGATGATGGTGGAGCA+GGG 0.483075 4.3:+79263524 MS.gene037668:CDS
ATGGAGAAGAACAAACTCAA+TGG 0.489712 4.3:+79258173 MS.gene037668:CDS
GTATGAAGTTTCTAAGGCTG+AGG 0.491193 4.3:+79261990 MS.gene037668:CDS
GCCATATATTTAATATCAAT+AGG 0.491699 4.3:+79261613 MS.gene037668:CDS
TATTTAATATCAATAGGAAC+AGG 0.493899 4.3:+79261619 MS.gene037668:CDS
TGGAGAAGAACAAACTCAAT+GGG 0.500219 4.3:+79258174 MS.gene037668:CDS
GCAACAACAACTTGCAACAT+TGG 0.501651 4.3:-79261919 None:intergenic
TCCAAGCACCAGTTGAAGCT+CGG 0.502000 4.3:-79258271 None:intergenic
AACAAACTCAATGGGAAAAG+AGG 0.504207 4.3:+79258182 MS.gene037668:CDS
AGGAATGTGAACTATTGGTC+TGG 0.505602 4.3:+79260672 MS.gene037668:CDS
AAAATAAGTGGCAATGAAAG+AGG 0.509785 4.3:+79263001 MS.gene037668:CDS
TGAGCACATGGCTTTAAACT+TGG 0.519356 4.3:-79261538 None:intergenic
ATAATCATATTGAAGAAAGA+AGG 0.521655 4.3:+79261689 MS.gene037668:CDS
ACTTGCAACATTGGAGTCAA+AGG 0.523227 4.3:-79261910 None:intergenic
AAGACCTTAAGACAGCAGTT+AGG 0.523612 4.3:+79260652 MS.gene037668:CDS
GCTCCAAAACTCTCTAAAGA+AGG 0.526008 4.3:-79261652 None:intergenic
TATCGTTATAGGATACCAAA+TGG 0.526262 4.3:+79261883 MS.gene037668:CDS
TGATGGTGGAGCAGGGAGAA+TGG 0.527014 4.3:+79263531 MS.gene037668:CDS
AAAGCCTCTTTCTTCATCAT+CGG 0.532146 4.3:+79258293 MS.gene037668:CDS
CTTGCAACATTGGAGTCAAA+GGG 0.535156 4.3:-79261909 None:intergenic
GAGGGATGAACATTCTTCAA+AGG 0.536069 4.3:+79263020 MS.gene037668:CDS
TGTGCAGCACACATTCCAAA+TGG 0.538370 4.3:-79262824 None:intergenic
TGGAATTGTGGACTTTGTAG+TGG 0.549221 4.3:+79261736 MS.gene037668:CDS
TATGAAGTTTCTAAGGCTGA+GGG 0.553677 4.3:+79261991 MS.gene037668:CDS
AAATAAGTGGCAATGAAAGA+GGG 0.554719 4.3:+79263002 MS.gene037668:CDS
GGTTGATAATGAGATGAAAT+GGG 0.559596 4.3:+79258208 MS.gene037668:CDS
GAAATAGTGTAAATTGAAGC+TGG 0.559857 4.3:-79262917 None:intergenic
CTTACCGATGATGAAGAAAG+AGG 0.567463 4.3:-79258297 None:intergenic
TTACGACAAAATCCTCGTAC+CGG 0.572000 4.3:+79262970 MS.gene037668:CDS
TTGATATTAAATATATGGCT+AGG 0.573083 4.3:-79261609 None:intergenic
CTTTGGAATAGCAACTAGCT+TGG 0.573130 4.3:+79260602 MS.gene037668:CDS
TTGCAGCTCCAATCACACTA+AGG 0.574865 4.3:-79263282 None:intergenic
AGAAATTATCATACCAATAG+CGG 0.577769 4.3:-79262939 None:intergenic
CAGCGATTGAGTTTAGTGAA+AGG 0.579937 4.3:+79260571 MS.gene037668:intron
AAGCAATCACAGTGGTGTAA+CGG 0.582188 4.3:-79260749 None:intergenic
TAGCAAAGGAACAAAGTCCA+TGG 0.589206 4.3:+79262726 MS.gene037668:CDS
GCAGCAATAGTTAAAACTGA+AGG 0.594624 4.3:+79262698 MS.gene037668:CDS
CTTGGTGATTTACCTCACAA+AGG 0.594724 4.3:+79260620 MS.gene037668:CDS
CATGTACTAGTATGAGCACA+TGG 0.610321 4.3:-79261550 None:intergenic
TCAACCTTCTTTATCAAACA+AGG 0.610763 4.3:+79262851 MS.gene037668:CDS
TATGATGGAAAGAGTGATGA+TGG 0.611546 4.3:+79263514 MS.gene037668:CDS
GTTGAGATGAATCCGTCACA+TGG 0.612351 4.3:+79263118 MS.gene037668:CDS
TTAATATCAATAGGAACAGG+AGG 0.626168 4.3:+79261622 MS.gene037668:CDS
AACTGAAGGAGATTTAGCAA+AGG 0.632841 4.3:+79262712 MS.gene037668:CDS
CTTGATGCATAACCTTTGTG+AGG 0.643416 4.3:-79260632 None:intergenic
ATAGTGTAAATTGAAGCTGG+TGG 0.655165 4.3:-79262914 None:intergenic
ATTGAAAGTGAACCATGTGA+CGG 0.665680 4.3:-79263130 None:intergenic
AAACCAATAATTAGAAACTG+TGG 0.668309 4.3:-79263172 None:intergenic
CTAGTACATGCATTGAACCA+AGG 0.687201 4.3:+79261563 MS.gene037668:CDS
ACTCAATGGGAAAAGAGGTG+AGG 0.688695 4.3:+79258187 MS.gene037668:CDS
GATGGAAAGAGTGATGATGG+TGG 0.700425 4.3:+79263517 MS.gene037668:CDS
GTACAAGATCATGTGAATTG+GGG 0.701086 4.3:+79261790 MS.gene037668:CDS
GCACCAGTTGAAGCTCGGAG+AGG 0.701222 4.3:-79258266 None:intergenic
ATGAAGTTTCTAAGGCTGAG+GGG 0.703264 4.3:+79261992 MS.gene037668:CDS
GATGCATGAAGCAATCACAG+TGG 0.855736 4.3:-79260757 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTGATAAAAATTAAC+CGG + chr4.3:79260251-79260270 MS.gene037668:intron 10.0%
!! AAATTAAATCTTATTAAGTA+AGG - chr4.3:79258955-79258974 None:intergenic 10.0%
!! AATATAATGAATAGAAAAAT+AGG + chr4.3:79262875-79262894 MS.gene037668:CDS 10.0%
!! TTAAATAGAAATTTATACAT+TGG - chr4.3:79258512-79258531 None:intergenic 10.0%
!!! AATTATAAATATTTGTTTTG+AGG - chr4.3:79259280-79259299 None:intergenic 10.0%
!!! ATAAATTCATACTTATATTT+TGG - chr4.3:79258828-79258847 None:intergenic 10.0%
!!! ATATTTTTTTCCAAATAAAA+TGG - chr4.3:79260051-79260070 None:intergenic 10.0%
!!! ATTATAAATATTTGTTTTGA+GGG - chr4.3:79259279-79259298 None:intergenic 10.0%
!!! ATTTTTTTGTTTTGAAATTT+AGG - chr4.3:79260224-79260243 None:intergenic 10.0%
!!! TAAATTCATACTTATATTTT+GGG - chr4.3:79258827-79258846 None:intergenic 10.0%
!! AAAGGAAAATACATATATAT+AGG - chr4.3:79261335-79261354 None:intergenic 15.0%
!! AAGGAAAATACATATATATA+GGG - chr4.3:79261334-79261353 None:intergenic 15.0%
!! AGAAAAAAAAATATATCAAC+AGG - chr4.3:79259801-79259820 None:intergenic 15.0%
!! AGTAATCATAAATTATTTGA+TGG + chr4.3:79262646-79262665 MS.gene037668:intron 15.0%
!! ATATAAGTATGAATTTATTC+CGG + chr4.3:79258830-79258849 MS.gene037668:intron 15.0%
!! ATGATTTCAAAAAAATATGT+AGG + chr4.3:79262068-79262087 MS.gene037668:intron 15.0%
!! ATTTATTAAACAGTTCAATT+CGG - chr4.3:79261038-79261057 None:intergenic 15.0%
!! TCCTATTGATATTAAATATA+TGG - chr4.3:79261617-79261636 None:intergenic 15.0%
!! TTAACAATGTAATATCAATA+TGG - chr4.3:79262218-79262237 None:intergenic 15.0%
!!! AACTTTTATATTACCTTAAA+AGG + chr4.3:79262534-79262553 MS.gene037668:intron 15.0%
!!! ACATAGTAAATGAATATTTT+CGG + chr4.3:79259071-79259090 MS.gene037668:intron 15.0%
!!! ATTCCTTATTTTTATTATGA+AGG + chr4.3:79260069-79260088 MS.gene037668:intron 15.0%
!!! GTATGTTATATTTTTTTCAA+TGG - chr4.3:79261146-79261165 None:intergenic 15.0%
!!! TAAAAAAAAACCTTTTGATA+AGG + chr4.3:79259228-79259247 MS.gene037668:intron 15.0%
!!! TAATGGAATATTTCTATTTT+TGG + chr4.3:79258762-79258781 MS.gene037668:intron 15.0%
!!! TGGTTTTAAAATATACTTTA+TGG + chr4.3:79262405-79262424 MS.gene037668:intron 15.0%
!! AAAGCATGTATTCTATTATT+AGG + chr4.3:79259889-79259908 MS.gene037668:intron 20.0%
!! AATATATCAACAGGAAAAAA+AGG - chr4.3:79259792-79259811 None:intergenic 20.0%
!! AATTTAAAAGATTACTTTGC+CGG - chr4.3:79260427-79260446 None:intergenic 20.0%
!! AGGAAAATACATATATATAG+GGG - chr4.3:79261333-79261352 None:intergenic 20.0%
!! ATAATCATATTGAAGAAAGA+AGG + chr4.3:79261689-79261708 MS.gene037668:CDS 20.0%
!! ATACAAAAGCTACTATAATT+TGG - chr4.3:79260460-79260479 None:intergenic 20.0%
!! CAGAGTAAAATAATAAATTG+TGG - chr4.3:79262387-79262406 None:intergenic 20.0%
!! CTTACTTAATATGGAATATT+TGG - chr4.3:79259097-79259116 None:intergenic 20.0%
!! GCCATATATTTAATATCAAT+AGG + chr4.3:79261613-79261632 MS.gene037668:CDS 20.0%
!! GTAAAGTAAATATCCAAATT+GGG - chr4.3:79262805-79262824 None:intergenic 20.0%
!! TATTTAATATCAATAGGAAC+AGG + chr4.3:79261619-79261638 MS.gene037668:CDS 20.0%
!! TGTCCTTCATAATAAAAATA+AGG - chr4.3:79260075-79260094 None:intergenic 20.0%
!! TTAAATGAAATGCAATAACT+TGG + chr4.3:79262617-79262636 MS.gene037668:intron 20.0%
!! TTGATATTAAATATATGGCT+AGG - chr4.3:79261612-79261631 None:intergenic 20.0%
!! TTTAATAAGTCCTTATCAAA+AGG - chr4.3:79259241-79259260 None:intergenic 20.0%
!!! AAAAGATGTCATTTTTCAAT+TGG + chr4.3:79261713-79261732 MS.gene037668:CDS 20.0%
!!! AAACAAAATCAAATTTTGGA+AGG + chr4.3:79261167-79261186 MS.gene037668:intron 20.0%
!!! AAATGTTTTATATATAGACC+AGG - chr4.3:79260190-79260209 None:intergenic 20.0%
!!! AAGTAATCTTTTAAATTGTG+AGG + chr4.3:79260430-79260449 MS.gene037668:intron 20.0%
!!! AGTAATGGTTCAATTTTTTT+TGG + chr4.3:79261252-79261271 MS.gene037668:intron 20.0%
!!! AGTTTACCATTTTTATGATT+AGG + chr4.3:79259458-79259477 MS.gene037668:intron 20.0%
!!! ATATACATTGACTTAAATTG+AGG - chr4.3:79258925-79258944 None:intergenic 20.0%
!!! CAAATGTAGAAACTTTTTAT+TGG + chr4.3:79258684-79258703 MS.gene037668:intron 20.0%
!!! CACAATTTATTATTTTACTC+TGG + chr4.3:79262385-79262404 MS.gene037668:intron 20.0%
!!! GAGTTTTTTCTTACTTAATA+TGG - chr4.3:79259106-79259125 None:intergenic 20.0%
!!! TAAAGCATTGTATATATGTA+GGG + chr4.3:79260979-79260998 MS.gene037668:intron 20.0%
!!! TACCAAACAAAATCAAATTT+TGG + chr4.3:79261163-79261182 MS.gene037668:intron 20.0%
!!! TCTTTTCCTAATCATAAAAA+TGG - chr4.3:79259467-79259486 None:intergenic 20.0%
!!! TTAAAGCATTGTATATATGT+AGG + chr4.3:79260978-79260997 MS.gene037668:intron 20.0%
!!! TTCCAAAATTTGATTTTGTT+TGG - chr4.3:79261168-79261187 None:intergenic 20.0%
!!! TTCTTAATCATTTCAAGTTA+TGG - chr4.3:79259714-79259733 None:intergenic 20.0%
!!! TTGATTTAACAAAAGCATAA+CGG - chr4.3:79259438-79259457 None:intergenic 20.0%
! AAACCAATAATTAGAAACTG+TGG - chr4.3:79263175-79263194 None:intergenic 25.0%
! AAAGGAACATAACTATTTGT+AGG - chr4.3:79259774-79259793 None:intergenic 25.0%
! AAATACTTACTTGAGTTTCT+TGG - chr4.3:79262043-79262062 None:intergenic 25.0%
! AATTCCAAAACTGTTAGTAA+TGG + chr4.3:79261237-79261256 MS.gene037668:intron 25.0%
! ACTTAATGTTCTATAAGATG+AGG - chr4.3:79260810-79260829 None:intergenic 25.0%
! AGAAATTATCATACCAATAG+CGG - chr4.3:79262942-79262961 None:intergenic 25.0%
! ATATATAGGGGATATATACA+GGG - chr4.3:79261321-79261340 None:intergenic 25.0%
! ATGAATAGAAAAATAGGACA+TGG + chr4.3:79262881-79262900 MS.gene037668:CDS 25.0%
! CAAGTAAAAATGGTAAAAGT+TGG + chr4.3:79263347-79263366 MS.gene037668:CDS 25.0%
! CTTGATCAAATTCATCAAAA+AGG + chr4.3:79259358-79259377 MS.gene037668:intron 25.0%
! GATTCTTCATTGGATTATAA+TGG + chr4.3:79258236-79258255 MS.gene037668:CDS 25.0%
! GCATGACTTAAATTCTATAA+TGG - chr4.3:79258884-79258903 None:intergenic 25.0%
! GGTAAAGTAAATATCCAAAT+TGG - chr4.3:79262806-79262825 None:intergenic 25.0%
! GTACTAGATCAATAGATTAT+TGG + chr4.3:79260144-79260163 MS.gene037668:intron 25.0%
! GTAGCACTATAAGAATATAT+AGG + chr4.3:79258373-79258392 MS.gene037668:intron 25.0%
! GTTGAATGCACAAATATTAA+TGG + chr4.3:79258745-79258764 MS.gene037668:intron 25.0%
! TACAATCAAAGTTTCAATTG+CGG + chr4.3:79262104-79262123 MS.gene037668:intron 25.0%
! TAGATCAATAGATTATTGGT+CGG + chr4.3:79260148-79260167 MS.gene037668:intron 25.0%
! TATATATAGGGGATATATAC+AGG - chr4.3:79261322-79261341 None:intergenic 25.0%
! TCAATTGTATGAAGTTTCTA+AGG + chr4.3:79261984-79262003 MS.gene037668:CDS 25.0%
! TCATCTAAATCATATAACCT+TGG + chr4.3:79262304-79262323 MS.gene037668:intron 25.0%
! TCGCACTAGTTAATTAAAAT+GGG - chr4.3:79259936-79259955 None:intergenic 25.0%
! TGACTTAAATTCTATAATGG+AGG - chr4.3:79258881-79258900 None:intergenic 25.0%
! TGCTACTATTATTAGGATTA+TGG - chr4.3:79258359-79258378 None:intergenic 25.0%
! TGGATATTTACTTTACCATT+TGG + chr4.3:79262809-79262828 MS.gene037668:CDS 25.0%
!! AAAAATGGTAAAAGTTGGTT+TGG + chr4.3:79263352-79263371 MS.gene037668:CDS 25.0%
!! ATTACCTTGTTTGATAAAGA+AGG - chr4.3:79262858-79262877 None:intergenic 25.0%
!! CTTATAGTGCTACTATTATT+AGG - chr4.3:79258366-79258385 None:intergenic 25.0%
!! GAAGCAAATTTTATCGTTAT+AGG + chr4.3:79261872-79261891 MS.gene037668:CDS 25.0%
!! GTTTTGTATTTGCTCAAAAA+TGG + chr4.3:79260933-79260952 MS.gene037668:intron 25.0%
!! TATTTCTGATATCCTTCAAT+AGG + chr4.3:79259500-79259519 MS.gene037668:intron 25.0%
!! TCACATTTTTGTACCTTTTA+AGG - chr4.3:79262550-79262569 None:intergenic 25.0%
!! TGGTTCAGTTTAAAATAGTT+CGG - chr4.3:79261203-79261222 None:intergenic 25.0%
!!! AAAGCATTGTATATATGTAG+GGG + chr4.3:79260980-79260999 MS.gene037668:intron 25.0%
!!! AGGATTTTTTTGGTCTTTAA+TGG - chr4.3:79258856-79258875 None:intergenic 25.0%
!!! CAATTGTAACATTTGTTTTG+TGG + chr4.3:79261463-79261482 MS.gene037668:intron 25.0%
!!! CAGTTTCTAATTATTGGTTT+TGG + chr4.3:79263175-79263194 MS.gene037668:CDS 25.0%
!!! CCACTTATTTTTCTTAAAAC+CGG - chr4.3:79262992-79263011 None:intergenic 25.0%
!!! CTTTTTCAGATTTTTTGACA+AGG + chr4.3:79262676-79262695 MS.gene037668:intron 25.0%
!!! TCATTGCTTATTTTTGTGAT+TGG + chr4.3:79261850-79261869 MS.gene037668:CDS 25.0%
!!! TGGTTCAATTTTTTTTGGTT+TGG + chr4.3:79261257-79261276 MS.gene037668:intron 25.0%
AAAATAAGTGGCAATGAAAG+AGG + chr4.3:79263001-79263020 MS.gene037668:CDS 30.0%
AAATAAGTGGCAATGAAAGA+GGG + chr4.3:79263002-79263021 MS.gene037668:CDS 30.0%
AATTGTTGTAACTGCAATTG+AGG - chr4.3:79262338-79262357 None:intergenic 30.0%
ACATAACTATTTGTAGGTAG+TGG - chr4.3:79259768-79259787 None:intergenic 30.0%
AGATTTGAATAGTAGTCGTT+TGG + chr4.3:79263378-79263397 MS.gene037668:CDS 30.0%
AGTTTGATATGCAAACAGTT+TGG - chr4.3:79261085-79261104 None:intergenic 30.0%
ATAAAATGGTAGCTTCCTAT+AGG - chr4.3:79260037-79260056 None:intergenic 30.0%
ATAACGGTGGTAAATATTCA+AGG - chr4.3:79259422-79259441 None:intergenic 30.0%
ATGAACATTCTTCAAAGGAT+TGG + chr4.3:79263025-79263044 MS.gene037668:CDS 30.0%
ATGTACAAGATCATGTGAAT+TGG + chr4.3:79261788-79261807 MS.gene037668:CDS 30.0%
ATTTACACTATTTCCGCTAT+TGG + chr4.3:79262926-79262945 MS.gene037668:CDS 30.0%
ATTTACTATGTATGCACAGA+TGG - chr4.3:79259062-79259081 None:intergenic 30.0%
CAATGCAACATTAAAGATTG+TGG + chr4.3:79262474-79262493 MS.gene037668:intron 30.0%
CATAACTATTTGTAGGTAGT+GGG - chr4.3:79259767-79259786 None:intergenic 30.0%
CCAATAATAACAGTTTGGTT+CGG - chr4.3:79261121-79261140 None:intergenic 30.0%
CGAACCAAACTGTTATTATT+GGG + chr4.3:79261119-79261138 MS.gene037668:intron 30.0%
CTCGCACTAGTTAATTAAAA+TGG - chr4.3:79259937-79259956 None:intergenic 30.0%
GAAACTTCATACAATTGAGT+TGG - chr4.3:79261982-79262001 None:intergenic 30.0%
GAAATAGTGTAAATTGAAGC+TGG - chr4.3:79262920-79262939 None:intergenic 30.0%
GATCATGTGACAAGTAAAAA+TGG + chr4.3:79263337-79263356 MS.gene037668:CDS 30.0%
GTATTTGCTCAAAAATGGAA+AGG + chr4.3:79260938-79260957 MS.gene037668:intron 30.0%
GTTTGATAAGCATATTGGAT+CGG - chr4.3:79260320-79260339 None:intergenic 30.0%
TAACTAGTGCGAGTAATAAT+GGG + chr4.3:79259944-79259963 MS.gene037668:intron 30.0%
TAAGAACTCAGAGTTTGATT+TGG + chr4.3:79259728-79259747 MS.gene037668:intron 30.0%
TAGCAACCTCAATAAACTAT+TGG + chr4.3:79259981-79260000 MS.gene037668:intron 30.0%
TAGGATTATGGATGAACTTT+AGG - chr4.3:79258347-79258366 None:intergenic 30.0%
TATATAGGGGATATATACAG+GGG - chr4.3:79261320-79261339 None:intergenic 30.0%
TATCGTTATAGGATACCAAA+TGG + chr4.3:79261883-79261902 MS.gene037668:CDS 30.0%
TCAACCTTCTTTATCAAACA+AGG + chr4.3:79262851-79262870 MS.gene037668:CDS 30.0%
TCACATAACACTATAGTGAA+AGG - chr4.3:79261353-79261372 None:intergenic 30.0%
TGTAAGCAAAGGCAAAAAAA+GGG - chr4.3:79260553-79260572 None:intergenic 30.0%
TGTACAAGATCATGTGAATT+GGG + chr4.3:79261789-79261808 MS.gene037668:CDS 30.0%
TTAAAAAATCCACACTAGCT+AGG + chr4.3:79259556-79259575 MS.gene037668:intron 30.0%
TTAACTAGTGCGAGTAATAA+TGG + chr4.3:79259943-79259962 MS.gene037668:intron 30.0%
TTAATATCAATAGGAACAGG+AGG + chr4.3:79261622-79261641 MS.gene037668:CDS 30.0%
TTATCTAAACCTAGTCTCAA+TGG - chr4.3:79259526-79259545 None:intergenic 30.0%
TTCATGCATCATTTATCTCT+TGG + chr4.3:79260770-79260789 MS.gene037668:CDS 30.0%
TTTACTATGTATGCACAGAT+GGG - chr4.3:79259061-79259080 None:intergenic 30.0%
! ATTCTTAGCTGATTCATACT+TGG + chr4.3:79260725-79260744 MS.gene037668:CDS 30.0%
! ATTCTTCAAAGGATTGGTAT+TGG + chr4.3:79263031-79263050 MS.gene037668:CDS 30.0%
! ATTTAACAAAAGCATAACGG+TGG - chr4.3:79259435-79259454 None:intergenic 30.0%
! CAGTTTAAAATAGTTCGGTT+CGG - chr4.3:79261198-79261217 None:intergenic 30.0%
! TAAATTCTATAATGGAGGCA+AGG - chr4.3:79258876-79258895 None:intergenic 30.0%
! TAGGAAGCTACCATTTTATT+TGG + chr4.3:79260038-79260057 MS.gene037668:intron 30.0%
! TGAACCATTACTAACAGTTT+TGG - chr4.3:79261244-79261263 None:intergenic 30.0%
! TTCTTAGCTGATTCATACTT+GGG + chr4.3:79260726-79260745 MS.gene037668:CDS 30.0%
!! AAACCTTCTTTAGAGAGTTT+TGG + chr4.3:79261649-79261668 MS.gene037668:CDS 30.0%
!! AGGTTGATAATGAGATGAAA+TGG + chr4.3:79258207-79258226 MS.gene037668:CDS 30.0%
!! GGTTGATAATGAGATGAAAT+GGG + chr4.3:79258208-79258227 MS.gene037668:CDS 30.0%
!! TACAATTGAGTTGGATTAGA+AGG - chr4.3:79261973-79261992 None:intergenic 30.0%
!! TTTGCTTTTGATTCACGAAA+GGG + chr4.3:79259601-79259620 MS.gene037668:intron 30.0%
!! TTTTTCAATTGGTGGAATTG+TGG + chr4.3:79261724-79261743 MS.gene037668:CDS 30.0%
!!! AGATGTCATTTTTCAATTGG+TGG + chr4.3:79261716-79261735 MS.gene037668:CDS 30.0%
!!! AGCAGTTCAGTTTAGTTTTT+TGG + chr4.3:79261283-79261302 MS.gene037668:intron 30.0%
!!! AGCTAGTGTGGATTTTTTAA+AGG - chr4.3:79259556-79259575 None:intergenic 30.0%
!!! CACTTTCAATGAGTGTTTTT+TGG + chr4.3:79263143-79263162 MS.gene037668:CDS 30.0%
!!! CCGGTTTTAAGAAAAATAAG+TGG + chr4.3:79262989-79263008 MS.gene037668:CDS 30.0%
!!! TTTTTTTGGTCTTTAATGGC+CGG - chr4.3:79258852-79258871 None:intergenic 30.0%
AAAGCCTCTTTCTTCATCAT+CGG + chr4.3:79258293-79258312 MS.gene037668:CDS 35.0%
AACAAACTCAATGGGAAAAG+AGG + chr4.3:79258182-79258201 MS.gene037668:CDS 35.0%
AACAATGATAGTAGCAGCTT+TGG + chr4.3:79263072-79263091 MS.gene037668:CDS 35.0%
AACACTTCATGAATCTTCCT+TGG - chr4.3:79261583-79261602 None:intergenic 35.0%
AACCACAATTTCTACCACAT+CGG - chr4.3:79262573-79262592 None:intergenic 35.0%
AACTGAAGGAGATTTAGCAA+AGG + chr4.3:79262712-79262731 MS.gene037668:CDS 35.0%
ACTATAAATACGACCACATC+AGG - chr4.3:79262274-79262293 None:intergenic 35.0%
AGTTTGCAATGTAACCACAA+CGG - chr4.3:79262518-79262537 None:intergenic 35.0%
ATACTTTATGGTTGCGATTG+TGG + chr4.3:79262417-79262436 MS.gene037668:intron 35.0%
ATAGTGTAAATTGAAGCTGG+TGG - chr4.3:79262917-79262936 None:intergenic 35.0%
ATCGGATGTGTAATTGAACT+GGG - chr4.3:79260302-79260321 None:intergenic 35.0%
ATGCTTATCAAACCGACAAT+GGG + chr4.3:79260327-79260346 MS.gene037668:intron 35.0%
ATGGAGAAGAACAAACTCAA+TGG + chr4.3:79258173-79258192 MS.gene037668:CDS 35.0%
ATGGGTTCATGATTCTTCAT+TGG + chr4.3:79258226-79258245 MS.gene037668:CDS 35.0%
ATTGAAAGTGAACCATGTGA+CGG - chr4.3:79263133-79263152 None:intergenic 35.0%
ATTGCTTAATATGTGCCCTT+AGG + chr4.3:79258785-79258804 MS.gene037668:intron 35.0%
CAAAACAACAAAACAGGGTT+TGG + chr4.3:79261489-79261508 MS.gene037668:intron 35.0%
CAGTTAGGAATGTGAACTAT+TGG + chr4.3:79260667-79260686 MS.gene037668:CDS 35.0%
CATAAATTATGCACCTGATG+TGG + chr4.3:79262258-79262277 MS.gene037668:intron 35.0%
CCGAACCAAACTGTTATTAT+TGG + chr4.3:79261118-79261137 MS.gene037668:intron 35.0%
CTGTAAGCAAAGGCAAAAAA+AGG - chr4.3:79260554-79260573 None:intergenic 35.0%
CTTTCGTGAATCAAAAGCAA+AGG - chr4.3:79259602-79259621 None:intergenic 35.0%
GAGGATATACTTTAGCAACT+TGG - chr4.3:79258906-79258925 None:intergenic 35.0%
GCAGCAATAGTTAAAACTGA+AGG + chr4.3:79262698-79262717 MS.gene037668:CDS 35.0%
GGAATTGAACTGAAACAGTT+TGG - chr4.3:79261223-79261242 None:intergenic 35.0%
GGTGACAAAACAACAAAACA+GGG + chr4.3:79261484-79261503 MS.gene037668:intron 35.0%
GTACAAGATCATGTGAATTG+GGG + chr4.3:79261790-79261809 MS.gene037668:CDS 35.0%
GTCGTTTGGATAAATTCTAC+TGG + chr4.3:79263392-79263411 MS.gene037668:CDS 35.0%
TATGCTTATCAAACCGACAA+TGG + chr4.3:79260326-79260345 MS.gene037668:intron 35.0%
TATTGATCTAGTACCTTGAC+CGG - chr4.3:79260138-79260157 None:intergenic 35.0%
TCCAAAAAGTGGCATTAAAG+TGG - chr4.3:79260703-79260722 None:intergenic 35.0%
TGATCAACATGATCCCAATT+TGG + chr4.3:79262789-79262808 MS.gene037668:CDS 35.0%
TGGAGAAGAACAAACTCAAT+GGG + chr4.3:79258174-79258193 MS.gene037668:CDS 35.0%
TGGTCCCAATAATAACAGTT+TGG - chr4.3:79261126-79261145 None:intergenic 35.0%
TGGTGACAAAACAACAAAAC+AGG + chr4.3:79261483-79261502 MS.gene037668:intron 35.0%
TTCTCATTGAATCAGGAACT+TGG - chr4.3:79263243-79263262 None:intergenic 35.0%
TTGCTTAATATGTGCCCTTA+GGG + chr4.3:79258786-79258805 MS.gene037668:intron 35.0%
! AAAATTAACCGGTTCATGAC+CGG + chr4.3:79260262-79260281 MS.gene037668:intron 35.0%
! AATTGTGGTTGTGATGATGT+TGG + chr4.3:79262583-79262602 MS.gene037668:intron 35.0%
! ATTGTGGTTGTGATGATGTT+GGG + chr4.3:79262584-79262603 MS.gene037668:intron 35.0%
! CAAAGGATTGGTATTGGAAT+GGG + chr4.3:79263037-79263056 MS.gene037668:CDS 35.0%
! GGATAAATTCTACTGGCTAT+TGG + chr4.3:79263399-79263418 MS.gene037668:CDS 35.0%
! TATGATGGAAAGAGTGATGA+TGG + chr4.3:79263514-79263533 MS.gene037668:CDS 35.0%
! TCAAAGGATTGGTATTGGAA+TGG + chr4.3:79263036-79263055 MS.gene037668:CDS 35.0%
! TGAGTTGGATTAGAAGGATA+AGG - chr4.3:79261967-79261986 None:intergenic 35.0%
! TTTTTCTTAAAACCGGTACG+AGG - chr4.3:79262985-79263004 None:intergenic 35.0%
!! CTTTGCTTTTGATTCACGAA+AGG + chr4.3:79259600-79259619 MS.gene037668:intron 35.0%
!! TATGAAGTTTCTAAGGCTGA+GGG + chr4.3:79261991-79262010 MS.gene037668:CDS 35.0%
!! TGTCGGTTTGATAAGCATAT+TGG - chr4.3:79260325-79260344 None:intergenic 35.0%
!!! AATGGAGGCAAGGATTTTTT+TGG - chr4.3:79258866-79258885 None:intergenic 35.0%
!!! ACCACTTTAATGCCACTTTT+TGG + chr4.3:79260699-79260718 MS.gene037668:CDS 35.0%
!!! ACTTTAATGCCACTTTTTGG+AGG + chr4.3:79260702-79260721 MS.gene037668:CDS 35.0%
!!! CGATGTTTTAAAACTCGAAC+CGG + chr4.3:79260104-79260123 MS.gene037668:intron 35.0%
!!! CTAATTATTGGTTTTGGCGA+CGG + chr4.3:79263181-79263200 MS.gene037668:CDS 35.0%
AACTCAATCGCTGTAAGCAA+AGG - chr4.3:79260564-79260583 None:intergenic 40.0%
AAGACCTTAAGACAGCAGTT+AGG + chr4.3:79260652-79260671 MS.gene037668:CDS 40.0%
AAGCAATCACAGTGGTGTAA+CGG - chr4.3:79260752-79260771 None:intergenic 40.0%
AATTGTTGTACTCACCGTTG+TGG + chr4.3:79262501-79262520 MS.gene037668:intron 40.0%
ACTTGCAACATTGGAGTCAA+AGG - chr4.3:79261913-79261932 None:intergenic 40.0%
AGGAATGTGAACTATTGGTC+TGG + chr4.3:79260672-79260691 MS.gene037668:CDS 40.0%
AGTGAAAGGCTTAGCTACTT+TGG + chr4.3:79260585-79260604 MS.gene037668:CDS 40.0%
CAGCGATTGAGTTTAGTGAA+AGG + chr4.3:79260571-79260590 MS.gene037668:intron 40.0%
CATGTACTAGTATGAGCACA+TGG - chr4.3:79261553-79261572 None:intergenic 40.0%
CATTCCTAACTGCTGTCTTA+AGG - chr4.3:79260659-79260678 None:intergenic 40.0%
CCTGATTCAATGAGAAGCTT+GGG + chr4.3:79263247-79263266 MS.gene037668:CDS 40.0%
CTAGTACATGCATTGAACCA+AGG + chr4.3:79261563-79261582 MS.gene037668:CDS 40.0%
CTCTTTCTTCATCATCGGTA+AGG + chr4.3:79258298-79258317 MS.gene037668:intron 40.0%
CTTACCGATGATGAAGAAAG+AGG - chr4.3:79258300-79258319 None:intergenic 40.0%
CTTGATGCATAACCTTTGTG+AGG - chr4.3:79260635-79260654 None:intergenic 40.0%
CTTGCAACATTGGAGTCAAA+GGG - chr4.3:79261912-79261931 None:intergenic 40.0%
GAGGGATGAACATTCTTCAA+AGG + chr4.3:79263020-79263039 MS.gene037668:CDS 40.0%
GATCGGATGTGTAATTGAAC+TGG - chr4.3:79260303-79260322 None:intergenic 40.0%
GCAACAACAACTTGCAACAT+TGG - chr4.3:79261922-79261941 None:intergenic 40.0%
GCATTGTATATATGTAGGGG+TGG + chr4.3:79260983-79261002 MS.gene037668:intron 40.0%
GCGCCACAGTTTCTAATTAT+TGG + chr4.3:79263169-79263188 MS.gene037668:CDS 40.0%
GCTAAGAATCCTCCAAAAAG+TGG - chr4.3:79260714-79260733 None:intergenic 40.0%
GGAAGAATTCAAACTCACTC+AGG + chr4.3:79259622-79259641 MS.gene037668:intron 40.0%
GGACTTTACCTTAGTGTGAT+TGG + chr4.3:79263274-79263293 MS.gene037668:CDS 40.0%
GTACAAAAATGTGACCGATG+TGG + chr4.3:79262556-79262575 MS.gene037668:intron 40.0%
TAGCAAAGGAACAAAGTCCA+TGG + chr4.3:79262726-79262745 MS.gene037668:CDS 40.0%
TAGTCTCAATGGCCTATTGA+AGG - chr4.3:79259515-79259534 None:intergenic 40.0%
TCAATGAGAAGCTTGGGAAT+TGG + chr4.3:79263253-79263272 MS.gene037668:CDS 40.0%
TCATCTAAACCTAGCTAGTG+TGG - chr4.3:79259568-79259587 None:intergenic 40.0%
TCCTGATTCAATGAGAAGCT+TGG + chr4.3:79263246-79263265 MS.gene037668:CDS 40.0%
TGGAATTGTGGACTTTGTAG+TGG + chr4.3:79261736-79261755 MS.gene037668:CDS 40.0%
TTACGACAAAATCCTCGTAC+CGG + chr4.3:79262970-79262989 MS.gene037668:CDS 40.0%
TTCAATAGGCCATTGAGACT+AGG + chr4.3:79259514-79259533 MS.gene037668:intron 40.0%
TTCGTCAAAAACAAGCTGCT+GGG + chr4.3:79259017-79259036 MS.gene037668:intron 40.0%
TTTCGTCAAAAACAAGCTGC+TGG + chr4.3:79259016-79259035 MS.gene037668:intron 40.0%
TTTGTAGCTCGTGATATGTG+TGG + chr4.3:79258534-79258553 MS.gene037668:intron 40.0%
! AAATTAACCGGTTCATGACC+GGG + chr4.3:79260263-79260282 MS.gene037668:intron 40.0%
! AAGCCTTATCCCATTAAGTG+GGG + chr4.3:79262149-79262168 MS.gene037668:intron 40.0%
! AGGGTGCCAATAGTTTATTG+AGG - chr4.3:79259990-79260009 None:intergenic 40.0%
! CAAGCCTTATCCCATTAAGT+GGG + chr4.3:79262148-79262167 MS.gene037668:intron 40.0%
! CAGCTTTGGTCGAGAAAAAA+AGG + chr4.3:79263086-79263105 MS.gene037668:CDS 40.0%
! CTTGGTGATTTACCTCACAA+AGG + chr4.3:79260620-79260639 MS.gene037668:CDS 40.0%
! GCTCCAAAACTCTCTAAAGA+AGG - chr4.3:79261655-79261674 None:intergenic 40.0%
! GTTGTTGCTGATTGCTATGA+TGG + chr4.3:79263499-79263518 MS.gene037668:CDS 40.0%
! TGGTCTTGCTTACTCTATCA+TGG + chr4.3:79261509-79261528 MS.gene037668:CDS 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr4.3:79258604-79258623 MS.gene037668:intron 40.0%
!! ACTCAGAGTTTGATTTGGAC+TGG + chr4.3:79259733-79259752 MS.gene037668:intron 40.0%
!! ACTCATTAACTTGTGCCTTG+AGG - chr4.3:79258622-79258641 None:intergenic 40.0%
!! ATGAAGTTTCTAAGGCTGAG+GGG + chr4.3:79261992-79262011 MS.gene037668:CDS 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG - chr4.3:79258803-79258822 None:intergenic 40.0%
!! CTCAGAGTTTGATTTGGACT+GGG + chr4.3:79259734-79259753 MS.gene037668:intron 40.0%
!! CTCATTAACTTGTGCCTTGA+GGG - chr4.3:79258621-79258640 None:intergenic 40.0%
!! CTTTGGAATAGCAACTAGCT+TGG + chr4.3:79260602-79260621 MS.gene037668:CDS 40.0%
!! CTTTGTAGTGGACTCATTCT+TGG + chr4.3:79261748-79261767 MS.gene037668:CDS 40.0%
!! GGGGAATAATGGAAGACTTT+TGG + chr4.3:79262011-79262030 MS.gene037668:CDS 40.0%
!! GTATGAAGTTTCTAAGGCTG+AGG + chr4.3:79261990-79262009 MS.gene037668:CDS 40.0%
!! TATGTTAACTTGTGCCCTCA+AGG + chr4.3:79258646-79258665 MS.gene037668:intron 40.0%
!! TCAGAGTTTGATTTGGACTG+GGG + chr4.3:79259735-79259754 MS.gene037668:intron 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG - chr4.3:79258804-79258823 None:intergenic 40.0%
!! TGAGCACATGGCTTTAAACT+TGG - chr4.3:79261541-79261560 None:intergenic 40.0%
AAACTATTGGCACCCTCATC+CGG + chr4.3:79259994-79260013 MS.gene037668:intron 45.0%
ACCCATTGTATTACCGGATG+AGG - chr4.3:79260010-79260029 None:intergenic 45.0%
ACCCTCATCCGGTAATACAA+TGG + chr4.3:79260005-79260024 MS.gene037668:intron 45.0%
ACTCAATGGGAAAAGAGGTG+AGG + chr4.3:79258187-79258206 MS.gene037668:CDS 45.0%
ATACAATGGGTGCGTCCTAT+AGG + chr4.3:79260019-79260038 MS.gene037668:intron 45.0%
ATAGGGGATATATACAGGGG+TGG - chr4.3:79261317-79261336 None:intergenic 45.0%
CCACTTAATGGGATAAGGCT+TGG - chr4.3:79262150-79262169 None:intergenic 45.0%
CCCAAGCTTCTCATTGAATC+AGG - chr4.3:79263250-79263269 None:intergenic 45.0%
CCCATTGTATTACCGGATGA+GGG - chr4.3:79260009-79260028 None:intergenic 45.0%
CCCTCATCCGGTAATACAAT+GGG + chr4.3:79260006-79260025 MS.gene037668:intron 45.0%
CTTATCCCATTAAGTGGGGT+CGG + chr4.3:79262153-79262172 MS.gene037668:intron 45.0%
GACCGATGTGGTAGAAATTG+TGG + chr4.3:79262568-79262587 MS.gene037668:intron 45.0%
GATGCATGAAGCAATCACAG+TGG - chr4.3:79260760-79260779 None:intergenic 45.0%
GTTGAGATGAATCCGTCACA+TGG + chr4.3:79263118-79263137 MS.gene037668:CDS 45.0%
TATATATGTAGGGGTGGACG+TGG + chr4.3:79260989-79261008 MS.gene037668:intron 45.0%
TGCTGAACGTTAGTGAGTGA+TGG + chr4.3:79258988-79259007 MS.gene037668:intron 45.0%
TGTGCAGCACACATTCCAAA+TGG - chr4.3:79262827-79262846 None:intergenic 45.0%
TTGCAGCTCCAATCACACTA+AGG - chr4.3:79263285-79263304 None:intergenic 45.0%
! CCAAGCCTTATCCCATTAAG+TGG + chr4.3:79262147-79262166 MS.gene037668:intron 45.0%
! GTGACTGTTGCTAGTTTCCA+TGG - chr4.3:79262746-79262765 None:intergenic 45.0%
! TCTAAGGCTGAGGGGAATAA+TGG + chr4.3:79262000-79262019 MS.gene037668:CDS 45.0%
! TGGTCGTGACATCGAGATTT+TGG + chr4.3:79262437-79262456 MS.gene037668:intron 45.0%
!! CAGAGTTTGATTTGGACTGG+GGG + chr4.3:79259736-79259755 MS.gene037668:intron 45.0%
!! CAGTTTGGTTCGGAACAGTT+CGG - chr4.3:79261111-79261130 None:intergenic 45.0%
!! GATGGAAAGAGTGATGATGG+TGG + chr4.3:79263517-79263536 MS.gene037668:CDS 45.0%
!!! TATTGGTTTTGGCGACGGTT+TGG + chr4.3:79263186-79263205 MS.gene037668:CDS 45.0%
!! ATAATATCATATAAAATATA+AGG + chr4.3:79258579-79258598 MS.gene037668:intron 5.0%
!! TAATATCATATAAAATATAA+GGG + chr4.3:79258580-79258599 MS.gene037668:intron 5.0%
!!! TTTAATAAATTTAAAATAAC+TGG + chr4.3:79261048-79261067 MS.gene037668:intron 5.0%
!!! TTTTTTTTTACTTTTTTTAA+AGG - chr4.3:79259128-79259147 None:intergenic 5.0%
ATGTAGCCGACCCCACTTAA+TGG - chr4.3:79262162-79262181 None:intergenic 50.0%
CAATTGAGGTCGCAACACCA+AGG - chr4.3:79262324-79262343 None:intergenic 50.0%
CGACCCCACTTAATGGGATA+AGG - chr4.3:79262155-79262174 None:intergenic 50.0%
GGACGCACCCATTGTATTAC+CGG - chr4.3:79260016-79260035 None:intergenic 50.0%
GGAGTCAAAGGGCTTCCATT+TGG - chr4.3:79261901-79261920 None:intergenic 50.0%
GGATCGCATGACTGTTAACC+TGG + chr4.3:79260169-79260188 MS.gene037668:intron 50.0%
TCATCAACCCGGTCATGAAC+CGG - chr4.3:79260273-79260292 None:intergenic 50.0%
TCCAAGCACCAGTTGAAGCT+CGG - chr4.3:79258274-79258293 None:intergenic 50.0%
TGTAGCCGACCCCACTTAAT+GGG - chr4.3:79262161-79262180 None:intergenic 50.0%
! GTGGTTGTGATGATGTTGGG+AGG + chr4.3:79262587-79262606 MS.gene037668:intron 50.0%
!! AAGAGTGATGATGGTGGAGC+AGG + chr4.3:79263523-79263542 MS.gene037668:CDS 50.0%
!! AGAGTGATGATGGTGGAGCA+GGG + chr4.3:79263524-79263543 MS.gene037668:CDS 50.0%
!! AGTTTGATTTGGACTGGGGG+TGG + chr4.3:79259739-79259758 MS.gene037668:intron 50.0%
ACCTTGACCGGATCGATCAC+CGG - chr4.3:79260126-79260145 None:intergenic 55.0%
ACTCGAACCGGTGATCGATC+CGG + chr4.3:79260116-79260135 MS.gene037668:intron 55.0%
ATGTAGGGGTGGACGTGGTT+CGG + chr4.3:79260994-79261013 MS.gene037668:intron 55.0%
CAATCATAGGTGGACCGGAC+CGG - chr4.3:79260383-79260402 None:intergenic 55.0%
CCGGGAACTAGACCCATTGT+CGG - chr4.3:79260342-79260361 None:intergenic 55.0%
CTGGGATGACGTCATCAACC+CGG - chr4.3:79260284-79260303 None:intergenic 55.0%
GGTCCGGTCCACCTATGATT+GGG + chr4.3:79260382-79260401 MS.gene037668:intron 55.0%
GTCCGGTCCACCTATGATTG+GGG + chr4.3:79260383-79260402 MS.gene037668:intron 55.0%
GTTCAACCCGTCAAACCGAC+CGG + chr4.3:79260361-79260380 MS.gene037668:intron 55.0%
GTTCCTCTCCGAGCTTCAAC+TGG + chr4.3:79258263-79258282 MS.gene037668:CDS 55.0%
TCCGAGCTTCAACTGGTGCT+TGG + chr4.3:79258270-79258289 MS.gene037668:CDS 55.0%
TCCGGTCCACCTATGATTGG+GGG + chr4.3:79260384-79260403 MS.gene037668:intron 55.0%
! CCGACAATGGGTCTAGTTCC+CGG + chr4.3:79260339-79260358 MS.gene037668:intron 55.0%
!! GTCGGTTTGACGGGTTGAAC+CGG - chr4.3:79260361-79260380 None:intergenic 55.0%
!! TCGGTTTGACGGGTTGAACC+GGG - chr4.3:79260360-79260379 None:intergenic 55.0%
!! TGATGGTGGAGCAGGGAGAA+TGG + chr4.3:79263531-79263550 MS.gene037668:CDS 55.0%
ACCGGTGATCGATCCGGTCA+AGG + chr4.3:79260122-79260141 MS.gene037668:intron 60.0%
CCCCCCAATCATAGGTGGAC+CGG - chr4.3:79260388-79260407 None:intergenic 60.0%
CCGGTCCACCTATGATTGGG+GGG + chr4.3:79260385-79260404 MS.gene037668:intron 60.0%
CGGTCCACCTATGATTGGGG+GGG + chr4.3:79260386-79260405 MS.gene037668:intron 60.0%
CGGTCCGGTCCACCTATGAT+TGG + chr4.3:79260381-79260400 MS.gene037668:intron 60.0%
GCACCAGTTGAAGCTCGGAG+AGG - chr4.3:79258269-79258288 None:intergenic 60.0%
GGTCCACCTATGATTGGGGG+GGG + chr4.3:79260387-79260406 MS.gene037668:intron 60.0%
GTCCACCTATGATTGGGGGG+GGG + chr4.3:79260388-79260407 MS.gene037668:intron 60.0%
TCCACCTATGATTGGGGGGG+GGG + chr4.3:79260389-79260408 MS.gene037668:intron 60.0%
ACCCGTCAAACCGACCGGTC+CGG + chr4.3:79260366-79260385 MS.gene037668:intron 65.0%
ACCTATGATTGGGGGGGGGG+GGG + chr4.3:79260392-79260411 MS.gene037668:intron 65.0%
CACCTATGATTGGGGGGGGG+GGG + chr4.3:79260391-79260410 MS.gene037668:intron 65.0%
CATAGGTGGACCGGACCGGT+CGG - chr4.3:79260379-79260398 None:intergenic 65.0%
CCACCTATGATTGGGGGGGG+GGG + chr4.3:79260390-79260409 MS.gene037668:intron 65.0%
! GGCGACGGTTTGGCGCTTGT+TGG + chr4.3:79263196-79263215 MS.gene037668:CDS 65.0%
!! ACCGGACCGGTCGGTTTGAC+GGG - chr4.3:79260370-79260389 None:intergenic 65.0%
!! GACCGGACCGGTCGGTTTGA+CGG - chr4.3:79260371-79260390 None:intergenic 65.0%
!! GGGGTGGACGTGGTTCGGTT+CGG + chr4.3:79260999-79261018 MS.gene037668:intron 65.0%
CCCCCCCCCCCAATCATAGG+TGG - chr4.3:79260393-79260412 None:intergenic 70.0%
CCTATGATTGGGGGGGGGGG+GGG + chr4.3:79260393-79260412 MS.gene037668:intron 70.0%
CTATGATTGGGGGGGGGGGG+GGG + chr4.3:79260394-79260413 MS.gene037668:intron 70.0%
TATGATTGGGGGGGGGGGGG+GGG + chr4.3:79260395-79260414 MS.gene037668:intron 70.0%
ATGATTGGGGGGGGGGGGGG+GGG + chr4.3:79260396-79260415 MS.gene037668:intron 75.0%
CCCCCCCCCCCCCCAATCAT+AGG - chr4.3:79260396-79260415 None:intergenic 75.0%
! TGATTGGGGGGGGGGGGGGG+GGG + chr4.3:79260397-79260416 MS.gene037668:intron 80.0%
! ATTGGGGGGGGGGGGGGGGG+GGG + chr4.3:79260399-79260418 MS.gene037668:intron 85.0%
! GATTGGGGGGGGGGGGGGGG+GGG + chr4.3:79260398-79260417 MS.gene037668:intron 85.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + chr4.3:79260400-79260419 MS.gene037668:intron 90.0%
! GGGGGGGGGGGGGGGGGGTC+CGG + chr4.3:79260405-79260424 MS.gene037668:intron 95.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 79258173 79263558 79258173 ID=MS.gene037668
chr4.3 mRNA 79258173 79263558 79258173 ID=MS.gene037668.t1;Parent=MS.gene037668
chr4.3 exon 79258173 79258314 79258173 ID=MS.gene037668.t1.exon1;Parent=MS.gene037668.t1
chr4.3 CDS 79258173 79258314 79258173 ID=cds.MS.gene037668.t1;Parent=MS.gene037668.t1
chr4.3 exon 79260574 79260791 79260574 ID=MS.gene037668.t1.exon2;Parent=MS.gene037668.t1
chr4.3 CDS 79260574 79260791 79260574 ID=cds.MS.gene037668.t1;Parent=MS.gene037668.t1
chr4.3 exon 79261505 79262052 79261505 ID=MS.gene037668.t1.exon3;Parent=MS.gene037668.t1
chr4.3 CDS 79261505 79262052 79261505 ID=cds.MS.gene037668.t1;Parent=MS.gene037668.t1
chr4.3 exon 79262685 79263558 79262685 ID=MS.gene037668.t1.exon4;Parent=MS.gene037668.t1
chr4.3 CDS 79262685 79263558 79262685 ID=cds.MS.gene037668.t1;Parent=MS.gene037668.t1
Gene Sequence

>MS.gene037668

ATGGAGAAGAACAAACTCAATGGGAAAAGAGGTGAGGTTGATAATGAGATGAAATGGGTTCATGATTCTTCATTGGATTATAATGGAAGAGTTCCTCTCCGAGCTTCAACTGGTGCTTGGAAAGCCTCTTTCTTCATCATCGGTAAGGCTTTAACTTCTTGCATATTTTAACCTAAAGTTCATCCATAATCCTAATAATAGTAGCACTATAAGAATATATAGGACAATTTTGATCTTTTGTTTTGATACATAATATTTCTCACTTTTTTTTTTTATAAATCATTATTTCTCACATATTAACTTATCTAGAACTATAAAAATATATGTCAATCATGTCCAATGTATAAATTTCTATTTAATTTTTGTAGCTCGTGATATGTGTGGCTTATTTCATATTGCAGTTTGCATAATATCATATAAAATATAAGGGAAATGTTAACTTGTGCCCTCAAGGCACAAGTTAATGAGTCAAATATGTTAACTTGTGCCCTCAAGGCACAAGTTAATGAGTCAAATGTAGAAACTTTTTATTGGAATTCGTGTATTGCATTTAATTTGTTGACTTTTAATTAGTTGAATGCACAAATATTAATGGAATATTTCTATTTTTGGATTGCTTAATATGTGCCCTTAGGGCACAAGTTAACATGACCCAAAATATAAGTATGAATTTATTCCGGCCATTAAAGACCAAAAAAATCCTTGCCTCCATTATAGAATTTAAGTCATGCCAAGTTGCTAAAGTATATCCTCAATTTAAGTCAATGTATATATGCTCACCTTACTTAATAAGATTTAATTTGCAACTACATAAATGCTGAACGTTAGTGAGTGATGGAAGAGTTTCGTCAAAAACAAGCTGCTGGGTTTTATTCATTAGCTTTTCCCATCTGTGCATACATAGTAAATGAATATTTTCGGCCAAATATTCCATATTAAGTAAGAAAAAACTCCTTTAAAAAAAGTAAAAAAAAAAACTATAATTTAATGAGTTTTAAAGTATGTTAGTTAATATTTAAAAATAAAAACATTTTAAAAGAAAAATACTTTTCTCTTAAAAAAAAACCTTTTGATAAGGACTTATTAAATATTTATAATTTTTTCCCTCAAAACAAATATTTATAATTTTTAATTATTAAATGTCTACAAAGAACAAGTGTTTTTTTTTTAAACTAGCTAATTTGTCTTGATCAAATTCATCAAAAAGGAGTCTTGAGAAATATTTTTAAACGAAGTCGTCATCTTTCCTTGAATATTTACCACCGTTATGCTTTTGTTAAATCAAAGTTTACCATTTTTATGATTAGGAAAAGATAAACTTATTTAATATTTCTGATATCCTTCAATAGGCCATTGAGACTAGGTTTAGATAAAAGAATACCTTTAAAAAATCCACACTAGCTAGGTTTAGATGATACTTAAAATACCTTTGCTTTTGATTCACGAAAGGGAAGAATTCAAACTCACTCAGGACTATATATTTATAGATAATAAGTGTAAACTAAGTAATAATAAGATCATGAACAAAAACAAAAAAACCATAACTTGAAATGATTAAGAACTCAGAGTTTGATTTGGACTGGGGGTGGTTCCCACTACCTACAAATAGTTATGTTCCTTTTTTTCCTGTTGATATATTTTTTTTTCTGTTGATATATCTAGACATAATCTTCTACTAGTAACATCAGTGATGACAAATGAGATATGCTACATAATAAAGCATGTATTCTATTATTAGGTGAATTTCATTTTTAAGAAATCCCATTTTAATTAACTAGTGCGAGTAATAATGGGAGTGTGCTAAGCACTAGCAACCTCAATAAACTATTGGCACCCTCATCCGGTAATACAATGGGTGCGTCCTATAGGAAGCTACCATTTTATTTGGAAAAAAATATTCCTTATTTTTATTATGAAGGACATGCTTGAATCGATGTTTTAAAACTCGAACCGGTGATCGATCCGGTCAAGGTACTAGATCAATAGATTATTGGTCGGATCGCATGACTGTTAACCTGGTCTATATATAAAACATTTAAAATATTTGACCTAAATTTCAAAACAAAAAAATTCAATAAAAATATTGATAAAAATTAACCGGTTCATGACCGGGTTGATGACGTCATCCCAGTTCAATTACACATCCGATCCAATATGCTTATCAAACCGACAATGGGTCTAGTTCCCGGTTCAACCCGTCAAACCGACCGGTCCGGTCCACCTATGATTGGGGGGGGGGGGGGGGGGGGGTCCGGCAAAGTAATCTTTTAAATTGTGAGGTCATCCAAATTATAGTAGCTTTTGTATTCAATTATTACTCATATTACAACAAGTGTCAAGTTTCTAACAAAATTATGAGCTTAACATTTTTCAAAAACCCTTTTTTTGCCTTTGCTTACAGCGATTGAGTTTAGTGAAAGGCTTAGCTACTTTGGAATAGCAACTAGCTTGGTGATTTACCTCACAAAGGTTATGCATCAAGACCTTAAGACAGCAGTTAGGAATGTGAACTATTGGTCTGGAGTCACCACTTTAATGCCACTTTTTGGAGGATTCTTAGCTGATTCATACTTGGGCCGTTACACCACTGTGATTGCTTCATGCATCATTTATCTCTTGGTAATCTCAATCTCACCTCATCTTATAGAACATTAAGTAACATCAATTGAGTTTAATTATAACTATATATTAACTATTTATTAATTGTGTACTAACTGTACTGACTACTTTGTATCAGTTGATTTTGAACGAAATGAACTAGTTTTGTATTTGCTCAAAAATGGAAAGGAAAAAAAAAACGATATATTAAAGCATTGTATATATGTAGGGGTGGACGTGGTTCGGTTCGGAATGAAAATCGAACCGAATTGAACTGTTTAATAAATTTAAAATAACTGGATCGAATCGAACCAAACTGTTTGCATATCAAACTGAACCGAACTGTTCCGAACCAAACTGTTATTATTGGGACCATTGAAAAAAATATAACATACCAAACAAAATCAAATTTTGGAAGGTAAAACCGAACCGAACTATTTTAAACTGAACCAAACTGTTTCAGTTCAATTCCAAAACTGTTAGTAATGGTTCAATTTTTTTTGGTTTGGTTCAGCAGTTCAGTTTAGTTTTTTGGTTTTTTTTCCACCCCTGTATATATCCCCTATATATATGTATTTTCCTTTCACTATAGTGTTATGTGACATGATATGATTTAATGTTTTTGTAAATATTTTTTACTAGCATAGTAGTTAAATTCTTATTGATTTGAATATTTTTATATAGTTTATTAACAATTGTAACATTTGTTTTGTGGTGACAAAACAACAAAACAGGGTTTGGTCTTGCTTACTCTATCATGGTTCTTACCAAGTTTAAAGCCATGTGCTCATACTAGTACATGCATTGAACCAAGGAAGATTCATGAAGTGTTCTTCTTCCTAGCCATATATTTAATATCAATAGGAACAGGAGGACATAAACCTTCTTTAGAGAGTTTTGGAGCTGATCAATTTGATGATAATCATATTGAAGAAAGAAGGCAAAAGATGTCATTTTTCAATTGGTGGAATTGTGGACTTTGTAGTGGACTCATTCTTGGTGTGACATTAATTGTTTATGTACAAGATCATGTGAATTGGGGTGTTGCTGATATTATTCTCACATGTGTTATGACTTTCTCATTGCTTATTTTTGTGATTGGAAGCAAATTTTATCGTTATAGGATACCAAATGGAAGCCCTTTGACTCCAATGTTGCAAGTTGTTGTTGCTGCAATTTCTAAGAGAAAGCTTCCTTATCCTTCTAATCCAACTCAATTGTATGAAGTTTCTAAGGCTGAGGGGAATAATGGAAGACTTTTGGCTCATACCAAGAAACTCAAGTAAGTATTTCATGAATGATTTCAAAAAAATATGTAGGAAAAGACGAGTCTTACAATCAAAGTTTCAATTGCGGTCATGATACAACAACAACAACCAAGCCTTATCCCATTAAGTGGGGTCGGCTACATGAATCAAATGACGTCATAGTGTTCTATCAAAAACCATATTGATATTACATTGTTAACATTGATATTTAAAATTGTGCATAAATTATGCACCTGATGTGGTCGTATTTATAGTTTTAATACAATCATCTAAATCATATAACCTTGGTGTTGCGACCTCAATTGCAGTTACAACAATTTAAAATCGCAGATCACGTTGTTGAGACCACAATTTATTATTTTACTCTGGTTTTAAAATATACTTTATGGTTGCGATTGTGGTCGTGACATCGAGATTTTGGATGCATATGCAATTCAATGCAACATTAAAGATTGTGGTTTCAATTGTTGTACTCACCGTTGTGGTTACATTGCAAACTTTTATATTACCTTAAAAGGTACAAAAATGTGACCGATGTGGTAGAAATTGTGGTTGTGATGATGTTGGGAGGTCTCATCTTAAATGAAATGCAATAACTTGGTAAAAAAGTAATCATAAATTATTTGATGGTACATTTCTTTTTCAGATTTTTTGACAAGGCAGCAATAGTTAAAACTGAAGGAGATTTAGCAAAGGAACAAAGTCCATGGAAACTAGCAACAGTCACTAGAGTTGAAGAAATGAAGCTTATGATCAACATGATCCCAATTTGGATATTTACTTTACCATTTGGAATGTGTGCTGCACAAACATCAACCTTCTTTATCAAACAAGGTAATATAATGAATAGAAAAATAGGACATGGTTTCGAGATTCCACCAGCTTCAATTTACACTATTTCCGCTATTGGTATGATAATTTCTGTCGCAATTTACGACAAAATCCTCGTACCGGTTTTAAGAAAAATAAGTGGCAATGAAAGAGGGATGAACATTCTTCAAAGGATTGGTATTGGAATGGGTTTTTCAGTTTTAACAATGATAGTAGCAGCTTTGGTCGAGAAAAAAAGGCTTGACGTTGTTGAGATGAATCCGTCACATGGTTCACTTTCAATGAGTGTTTTTTGGTTAGCGCCACAGTTTCTAATTATTGGTTTTGGCGACGGTTTGGCGCTTGTTGGTTTACAAGAATATTTCTATGACCAAGTTCCTGATTCAATGAGAAGCTTGGGAATTGGACTTTACCTTAGTGTGATTGGAGCTGCAAATTTTCTAAGTAGTTTGTTGATAACAATTGTTGATCATGTGACAAGTAAAAATGGTAAAAGTTGGTTTGGTGAAGATTTGAATAGTAGTCGTTTGGATAAATTCTACTGGCTATTGGCAGCTATAACTACATTGAGTGTGTTTGTGTTTGTGCTCTTTGCACAAAAGTATACTTATAAGAATGTGCAAAATAATGTTGTTGCTGATTGCTATGATGGAAAGAGTGATGATGGTGGAGCAGGGAGAATGGTGTGA
Protein sequence

>MS.gene037668.t1

MEKNKLNGKRGEVDNEMKWVHDSSLDYNGRVPLRASTGAWKASFFIIAIEFSERLSYFGIATSLVIYLTKVMHQDLKTAVRNVNYWSGVTTLMPLFGGFLADSYLGRYTTVIASCIIYLLGLVLLTLSWFLPSLKPCAHTSTCIEPRKIHEVFFFLAIYLISIGTGGHKPSLESFGADQFDDNHIEERRQKMSFFNWWNCGLCSGLILGVTLIVYVQDHVNWGVADIILTCVMTFSLLIFVIGSKFYRYRIPNGSPLTPMLQVVVAAISKRKLPYPSNPTQLYEVSKAEGNNGRLLAHTKKLKFFDKAAIVKTEGDLAKEQSPWKLATVTRVEEMKLMINMIPIWIFTLPFGMCAAQTSTFFIKQGNIMNRKIGHGFEIPPASIYTISAIGMIISVAIYDKILVPVLRKISGNERGMNILQRIGIGMGFSVLTMIVAALVEKKRLDVVEMNPSHGSLSMSVFWLAPQFLIIGFGDGLALVGLQEYFYDQVPDSMRSLGIGLYLSVIGAANFLSSLLITIVDHVTSKNGKSWFGEDLNSSRLDKFYWLLAAITTLSVFVFVLFAQKYTYKNVQNNVVADCYDGKSDDGGAGRMV