AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59046

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59046.t1 MTR_4g114340 97.414 580 11 2 1 579 1 577 0.0 1148
MS.gene59046.t1 MTR_5g012290 56.993 572 220 8 8 562 11 573 0.0 614
MS.gene59046.t1 MTR_5g012270 52.364 571 246 7 9 562 14 575 0.0 597
MS.gene59046.t1 MTR_4g101380 56.021 573 227 10 8 562 11 576 0.0 596
MS.gene59046.t1 MTR_5g085850 50.633 553 254 8 12 559 18 556 1.44e-173 504
MS.gene59046.t1 MTR_4g015080 44.658 571 294 11 2 560 12 572 1.36e-159 468
MS.gene59046.t1 MTR_7g067010 43.333 570 305 10 1 560 1 562 1.34e-156 460
MS.gene59046.t1 MTR_3g462710 41.404 570 318 7 1 560 1 564 4.54e-150 444
MS.gene59046.t1 MTR_3g112470 41.324 559 300 8 13 560 12 553 8.38e-148 438
MS.gene59046.t1 MTR_3g112460 40.575 557 307 7 13 560 12 553 2.69e-147 437
MS.gene59046.t1 MTR_5g055000 40.835 551 309 6 22 560 16 561 3.77e-144 429
MS.gene59046.t1 MTR_7g098200 39.609 563 317 6 4 553 9 561 3.01e-141 422
MS.gene59046.t1 MTR_3g112450 41.815 562 301 10 10 560 9 555 2.16e-140 419
MS.gene59046.t1 MTR_7g098200 39.138 580 330 7 4 574 9 574 8.80e-140 418
MS.gene59046.t1 MTR_5g014150 39.478 575 323 9 8 568 28 591 8.08e-138 414
MS.gene59046.t1 MTR_7g098040 39.753 566 318 6 4 556 14 569 1.20e-136 411
MS.gene59046.t1 MTR_7g098160 38.660 582 330 8 4 568 13 584 3.49e-136 409
MS.gene59046.t1 MTR_7g098230 38.721 563 319 8 31 578 33 584 3.41e-135 406
MS.gene59046.t1 MTR_1g041835 40.426 564 312 7 6 556 9 561 1.06e-132 399
MS.gene59046.t1 MTR_4g098800 37.345 565 340 7 2 557 14 573 1.55e-131 397
MS.gene59046.t1 MTR_1g041815 39.716 564 316 6 6 556 9 561 4.90e-131 395
MS.gene59046.t1 MTR_4g098800 37.345 565 340 7 2 557 79 638 7.75e-131 397
MS.gene59046.t1 MTR_1g075440 38.004 571 329 6 4 559 8 568 1.36e-130 394
MS.gene59046.t1 MTR_1g042310 38.095 567 332 5 1 556 3 561 5.71e-130 393
MS.gene59046.t1 MTR_7g098090 37.710 594 338 9 4 575 13 596 2.52e-129 392
MS.gene59046.t1 MTR_7g098180 37.308 587 344 6 6 578 13 589 2.77e-129 392
MS.gene59046.t1 MTR_7g098220 38.644 590 328 8 6 571 12 591 2.08e-128 389
MS.gene59046.t1 MTR_1g041875 39.130 552 311 6 1 540 3 541 2.11e-128 389
MS.gene59046.t1 MTR_1g116930 38.095 546 321 8 20 557 19 555 2.35e-127 386
MS.gene59046.t1 MTR_3g100980 38.380 568 318 9 19 571 11 561 5.02e-127 384
MS.gene59046.t1 MTR_7g088825 36.491 570 343 9 20 577 18 580 6.89e-127 385
MS.gene59046.t1 MTR_2g005130 38.616 549 315 11 13 556 29 560 5.82e-126 382
MS.gene59046.t1 MTR_7g010820 37.676 568 334 9 8 560 10 572 5.56e-125 380
MS.gene59046.t1 MTR_2g017750 36.851 597 351 11 1 576 11 602 6.57e-125 380
MS.gene59046.t1 MTR_4g019580 36.788 579 350 8 1 572 13 582 5.15e-124 377
MS.gene59046.t1 MTR_7g005930 36.380 558 336 8 8 557 21 567 6.33e-124 377
MS.gene59046.t1 MTR_8g087810 39.249 586 332 11 1 566 1 582 3.19e-123 375
MS.gene59046.t1 MTR_3g100980 36.745 596 317 10 19 571 11 589 5.78e-122 372
MS.gene59046.t1 MTR_3g069500 37.478 563 330 9 3 559 14 560 1.32e-120 369
MS.gene59046.t1 MTR_7g088790 36.204 569 341 10 21 577 26 584 3.00e-120 369
MS.gene59046.t1 MTR_1g042310 38.140 527 307 5 41 556 6 524 4.62e-120 366
MS.gene59046.t1 MTR_7g098220 38.739 555 306 8 41 571 3 547 1.01e-119 365
MS.gene59046.t1 MTR_3g069420 36.655 562 338 8 7 559 17 569 2.60e-119 365
MS.gene59046.t1 MTR_7g006540 36.254 582 336 10 21 578 60 630 6.71e-119 366
MS.gene59046.t1 MTR_7g065080 35.929 565 342 8 2 560 9 559 1.24e-118 363
MS.gene59046.t1 MTR_1g042310 38.196 521 303 5 47 556 5 517 2.77e-118 361
MS.gene59046.t1 MTR_8g087780 38.000 550 316 12 1 530 1 545 3.51e-118 362
MS.gene59046.t1 MTR_7g088820 34.636 563 349 9 11 561 14 569 3.52e-118 363
MS.gene59046.t1 MTR_1g041885 39.010 505 286 5 47 542 5 496 7.07e-118 360
MS.gene59046.t1 MTR_7g013270 36.029 544 329 8 24 557 90 624 8.18e-118 363
MS.gene59046.t1 MTR_5g038060 39.564 551 318 6 22 559 29 577 4.40e-117 360
MS.gene59046.t1 MTR_3g462710 41.928 446 244 6 125 560 15 455 6.78e-117 355
MS.gene59046.t1 MTR_4g033325 39.493 552 303 8 9 553 16 543 3.97e-116 356
MS.gene59046.t1 MTR_3g069440 37.345 565 330 9 7 559 16 568 8.69e-116 356
MS.gene59046.t1 MTR_4g033315 38.739 555 305 9 9 553 16 545 6.93e-115 353
MS.gene59046.t1 MTR_4g033310 38.739 555 305 9 9 553 16 545 6.93e-115 353
MS.gene59046.t1 MTR_0294s0020 38.739 555 305 9 8 553 15 543 7.60e-115 353
MS.gene59046.t1 MTR_1g085090 36.727 550 326 9 22 564 17 551 4.80e-114 352
MS.gene59046.t1 MTR_4g033330 38.532 545 305 9 1 538 9 530 2.66e-113 348
MS.gene59046.t1 MTR_4g107670 36.177 586 325 12 13 569 13 578 5.07e-113 349
MS.gene59046.t1 MTR_4g107580 34.642 586 360 12 1 569 4 583 6.69e-113 349
MS.gene59046.t1 MTR_3g072300 36.602 571 342 8 1 560 1 562 1.39e-112 348
MS.gene59046.t1 MTR_8g469310 37.297 555 338 6 13 557 15 569 1.59e-112 347
MS.gene59046.t1 MTR_7g111260 37.248 545 320 9 22 559 17 546 2.12e-112 347
MS.gene59046.t1 MTR_7g098200 38.950 457 256 6 113 556 4 450 2.47e-111 341
MS.gene59046.t1 MTR_7g088820 35.156 512 315 8 62 561 1 507 1.28e-110 341
MS.gene59046.t1 MTR_8g469480 37.912 546 324 6 27 559 41 584 4.71e-110 342
MS.gene59046.t1 MTR_4g107510 36.232 552 329 10 27 560 39 585 1.12e-109 341
MS.gene59046.t1 MTR_3g005010 37.024 551 307 9 8 549 14 533 3.09e-109 338
MS.gene59046.t1 MTR_5g038380 36.063 574 320 10 13 557 17 572 1.03e-108 338
MS.gene59046.t1 MTR_4g033375 38.447 515 281 9 1 504 9 498 1.40e-108 335
MS.gene59046.t1 MTR_8g469470 34.650 557 346 7 19 559 27 581 2.16e-107 334
MS.gene59046.t1 MTR_4g107530 34.838 554 342 8 27 564 36 586 1.15e-106 333
MS.gene59046.t1 MTR_4g033395 37.864 515 284 9 1 504 9 498 9.88e-104 322
MS.gene59046.t1 MTR_4g011280 33.457 541 349 9 26 558 34 571 2.15e-99 314
MS.gene59046.t1 MTR_8g038880 34.532 556 323 11 23 560 19 551 2.25e-99 313
MS.gene59046.t1 MTR_5g038190 32.609 552 359 6 19 559 19 568 1.95e-98 311
MS.gene59046.t1 MTR_7g088820 34.416 462 286 8 112 561 3 459 5.14e-98 307
MS.gene59046.t1 MTR_7g065080 35.124 484 294 8 83 560 3 472 9.33e-98 306
MS.gene59046.t1 MTR_8g103233 35.993 539 337 7 24 556 17 553 1.21e-97 309
MS.gene59046.t1 MTR_4g123537 35.587 562 326 13 13 560 32 571 1.76e-97 310
MS.gene59046.t1 MTR_7g098150 37.872 470 269 6 4 460 13 472 4.45e-97 305
MS.gene59046.t1 MTR_2g093180 34.552 547 326 10 23 557 20 546 2.74e-96 305
MS.gene59046.t1 MTR_4g107610 31.904 583 374 12 13 577 17 594 7.77e-96 305
MS.gene59046.t1 MTR_2g093160 33.211 545 335 9 23 557 20 545 4.51e-94 299
MS.gene59046.t1 MTR_2g101590 31.919 589 385 11 1 577 1 585 6.41e-94 301
MS.gene59046.t1 MTR_2g101650 30.458 568 382 10 1 558 1 565 3.61e-93 298
MS.gene59046.t1 MTR_2g101640 31.993 547 359 9 22 558 21 564 1.40e-92 297
MS.gene59046.t1 MTR_3g014790 32.867 572 336 12 21 569 14 560 4.75e-92 294
MS.gene59046.t1 MTR_4g024930 33.036 560 339 9 8 557 20 553 3.05e-91 292
MS.gene59046.t1 MTR_2g101610 31.641 591 385 12 1 577 1 586 1.57e-90 292
MS.gene59046.t1 MTR_2g093640 32.123 551 339 9 20 557 17 545 1.34e-86 279
MS.gene59046.t1 MTR_4g033325 37.225 454 254 8 107 553 16 445 4.98e-86 275
MS.gene59046.t1 MTR_4g033325 37.767 421 241 6 140 553 13 419 1.27e-84 270
MS.gene59046.t1 MTR_1g009200 31.319 546 362 8 22 558 25 566 1.46e-84 275
MS.gene59046.t1 MTR_4g033385 36.166 459 257 9 106 553 13 446 1.06e-83 269
MS.gene59046.t1 MTR_1g057460 31.338 568 355 12 1 558 24 566 2.42e-83 271
MS.gene59046.t1 MTR_7g064780 31.079 547 360 10 20 553 22 564 4.42e-82 268
MS.gene59046.t1 MTR_7g064800 31.754 570 367 12 1 553 2 566 3.33e-80 264
MS.gene59046.t1 MTR_7g098210 31.749 526 254 10 43 553 1 436 3.46e-80 259
MS.gene59046.t1 MTR_1g026740 31.216 551 363 10 20 560 13 557 8.58e-80 262
MS.gene59046.t1 MTR_2g101560 29.949 591 396 11 1 577 1 587 1.66e-78 260
MS.gene59046.t1 MTR_1g026750 31.746 567 364 11 22 578 16 569 2.24e-78 258
MS.gene59046.t1 MTR_1g057460 31.335 517 323 9 52 558 1 495 3.02e-78 256
MS.gene59046.t1 MTR_0236s0050 31.721 517 321 9 52 558 1 495 5.28e-78 255
MS.gene59046.t1 MTR_7g052600 34.234 555 315 13 11 556 12 525 1.09e-77 255
MS.gene59046.t1 MTR_7g051880 33.686 567 323 15 1 556 1 525 4.67e-77 253
MS.gene59046.t1 MTR_1g026770 31.136 546 357 12 26 560 17 554 1.41e-76 253
MS.gene59046.t1 MTR_7g051830 33.569 566 325 14 1 556 1 525 6.60e-76 250
MS.gene59046.t1 MTR_6g008690 31.022 548 333 10 33 560 16 538 1.39e-71 239
MS.gene59046.t1 MTR_4g033310 36.957 276 159 4 283 553 216 481 3.78e-52 186
MS.gene59046.t1 MTR_4g033310 45.604 182 89 2 9 190 16 187 1.53e-35 140
MS.gene59046.t1 MTR_1g009170 25.879 398 237 10 150 538 9 357 1.41e-32 129
MS.gene59046.t1 MTR_3g065350 33.540 161 102 2 331 490 1 157 7.30e-22 93.2
MS.gene59046.t1 MTR_8g091265 32.331 133 78 6 289 413 3 131 2.07e-15 73.9
MS.gene59046.t1 MTR_2g093650 26.866 201 91 5 336 535 31 176 2.43e-12 67.0
MS.gene59046.t1 MTR_4g033390 37.500 80 50 0 474 553 30 109 2.62e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59046.t1 AT2G26690 76.817 578 131 2 1 577 1 576 0.0 855
MS.gene59046.t1 AT2G26690 76.611 543 124 2 36 577 3 543 0.0 797
MS.gene59046.t1 AT2G26690 76.360 533 123 2 46 577 1 531 0.0 778
MS.gene59046.t1 AT1G12110 54.389 581 237 6 11 568 14 589 0.0 603
MS.gene59046.t1 AT3G21670 49.820 556 259 7 11 559 16 558 6.55e-175 508
MS.gene59046.t1 AT3G54140 42.004 569 316 7 1 560 1 564 6.46e-158 464
MS.gene59046.t1 AT3G54140 42.004 569 316 7 1 560 1 564 6.46e-158 464
MS.gene59046.t1 AT5G01180 41.021 568 320 8 2 560 3 564 4.31e-153 451
MS.gene59046.t1 AT5G01180 41.021 568 320 8 2 560 3 564 4.31e-153 451
MS.gene59046.t1 AT5G01180 41.021 568 320 8 2 560 3 564 4.31e-153 451
MS.gene59046.t1 AT2G02040 41.145 559 314 7 12 560 29 582 8.38e-148 439
MS.gene59046.t1 AT1G62200 38.172 558 326 6 12 559 40 588 4.81e-135 406
MS.gene59046.t1 AT4G21680 39.153 567 335 5 8 564 12 578 1.21e-133 402
MS.gene59046.t1 AT1G68570 40.385 572 320 9 21 578 21 585 2.29e-132 399
MS.gene59046.t1 AT1G68570 40.721 555 309 8 38 578 7 555 1.83e-131 396
MS.gene59046.t1 AT1G32450 37.543 586 343 8 13 578 26 608 6.80e-131 396
MS.gene59046.t1 AT1G62200 36.552 580 320 7 12 552 40 610 2.08e-129 392
MS.gene59046.t1 AT1G62200 36.552 580 320 7 12 552 54 624 4.27e-129 392
MS.gene59046.t1 AT1G59740 38.078 562 315 11 11 555 28 573 3.72e-127 385
MS.gene59046.t1 AT2G02020 36.832 543 301 8 12 550 30 534 4.70e-122 371
MS.gene59046.t1 AT1G69870 37.091 550 330 8 22 559 49 594 2.12e-118 364
MS.gene59046.t1 AT5G46040 37.591 548 316 9 7 540 10 545 8.49e-118 361
MS.gene59046.t1 AT5G13400 35.689 566 339 8 13 559 52 611 1.42e-117 362
MS.gene59046.t1 AT5G46050 37.500 544 314 9 6 535 9 540 1.87e-116 358
MS.gene59046.t1 AT5G19640 35.009 557 336 8 25 573 60 598 5.77e-116 357
MS.gene59046.t1 AT1G27040 37.251 553 331 7 14 560 13 555 1.39e-115 355
MS.gene59046.t1 AT1G27040 37.251 553 331 7 14 560 17 559 2.15e-115 355
MS.gene59046.t1 AT1G33440 37.937 572 327 10 12 571 26 581 3.13e-115 355
MS.gene59046.t1 AT3G53960 33.333 582 375 7 2 576 15 590 1.18e-113 351
MS.gene59046.t1 AT1G69850 36.163 589 330 10 1 557 3 577 4.91e-113 349
MS.gene59046.t1 AT3G54450 34.107 560 330 9 21 562 9 547 3.80e-111 343
MS.gene59046.t1 AT1G27040 37.476 531 316 7 36 560 7 527 2.67e-110 340
MS.gene59046.t1 AT2G37900 32.923 568 364 6 2 564 16 571 9.92e-110 340
MS.gene59046.t1 AT2G40460 35.076 593 353 9 1 579 1 575 4.24e-108 336
MS.gene59046.t1 AT1G18880 35.548 557 337 12 21 559 14 566 1.66e-107 335
MS.gene59046.t1 AT5G62680 33.684 570 356 9 27 578 46 611 1.75e-105 330
MS.gene59046.t1 AT1G22540 36.234 563 316 11 13 560 19 553 1.41e-102 321
MS.gene59046.t1 AT1G22570 35.675 541 319 8 9 537 15 538 2.85e-101 318
MS.gene59046.t1 AT5G62730 34.526 559 325 10 13 555 45 578 6.49e-101 318
MS.gene59046.t1 AT1G22550 34.690 565 339 10 8 560 14 560 1.39e-100 316
MS.gene59046.t1 AT1G72140 33.450 571 323 10 12 562 22 555 4.48e-100 315
MS.gene59046.t1 AT2G02020 33.517 543 298 10 12 550 30 513 1.88e-98 309
MS.gene59046.t1 AT1G27080 34.291 557 327 11 22 559 12 548 8.10e-98 309
MS.gene59046.t1 AT3G47960 34.155 568 348 11 11 559 48 608 1.82e-97 310
MS.gene59046.t1 AT1G72125 34.720 553 331 11 9 550 14 547 2.40e-97 308
MS.gene59046.t1 AT5G62730 34.381 541 314 10 31 555 4 519 6.28e-96 303
MS.gene59046.t1 AT1G72120 35.242 559 316 11 9 550 14 543 8.40e-96 303
MS.gene59046.t1 AT1G72130 34.196 541 318 8 16 550 16 524 2.50e-95 301
MS.gene59046.t1 AT1G52190 31.173 571 376 9 22 578 19 586 4.45e-95 303
MS.gene59046.t1 AT3G16180 32.118 576 368 12 19 578 17 585 6.26e-94 300
MS.gene59046.t1 AT2G37900 32.803 503 321 6 67 564 2 492 7.13e-94 296
MS.gene59046.t1 AT3G45660 33.037 563 354 11 3 560 20 564 1.02e-93 299
MS.gene59046.t1 AT3G45660 33.032 554 349 10 11 560 8 543 1.05e-93 298
MS.gene59046.t1 AT3G45660 33.032 554 349 10 11 560 8 543 1.05e-93 298
MS.gene59046.t1 AT5G46050 38.215 437 244 9 113 535 4 428 8.69e-93 293
MS.gene59046.t1 AT3G45680 32.000 550 349 9 23 566 19 549 4.22e-92 294
MS.gene59046.t1 AT3G45650 32.194 556 355 10 22 573 20 557 4.05e-91 291
MS.gene59046.t1 AT1G22570 34.623 517 309 8 33 537 2 501 2.68e-89 286
MS.gene59046.t1 AT1G27080 34.160 524 306 11 55 559 3 506 1.31e-88 284
MS.gene59046.t1 AT3G45710 30.797 552 344 11 24 562 21 547 2.98e-87 281
MS.gene59046.t1 AT3G25260 33.578 545 319 10 14 557 11 513 7.23e-87 279
MS.gene59046.t1 AT3G45650 30.756 582 355 11 22 573 20 583 4.58e-86 279
MS.gene59046.t1 AT3G25280 33.575 551 317 12 14 557 11 519 1.63e-84 273
MS.gene59046.t1 AT3G45700 30.220 546 350 8 23 562 15 535 7.17e-84 272
MS.gene59046.t1 AT3G45720 29.963 534 346 9 32 560 31 541 1.11e-83 272
MS.gene59046.t1 AT5G28470 29.891 552 369 11 22 562 15 559 4.14e-83 270
MS.gene59046.t1 AT5G28470 29.401 551 371 11 22 562 15 557 2.49e-80 263
MS.gene59046.t1 AT5G14940 31.694 549 334 10 31 559 14 541 5.72e-77 254
MS.gene59046.t1 AT1G69860 31.330 549 353 8 22 560 16 550 1.04e-74 248
MS.gene59046.t1 AT3G45690 28.729 543 323 13 23 560 17 500 8.47e-72 239
MS.gene59046.t1 AT1G72130 32.093 430 261 7 126 550 3 406 2.34e-71 235
MS.gene59046.t1 AT1G72130 32.093 430 261 7 126 550 3 406 2.34e-71 235
MS.gene59046.t1 AT3G01350 30.811 555 334 14 31 555 14 548 3.66e-70 236
MS.gene59046.t1 AT5G11570 26.667 525 304 13 34 552 23 472 6.13e-47 171
MS.gene59046.t1 AT2G38100 28.709 519 320 15 52 556 2 484 9.48e-44 163
MS.gene59046.t1 AT2G38100 28.627 517 323 14 52 556 18 500 2.09e-43 162
MS.gene59046.t1 AT2G38100 28.627 517 323 14 52 556 24 506 2.32e-43 162

Find 152 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCTTAAATCTAGTATTTC+AGG 0.144252 8.4:-13791228 MS.gene59046:CDS
ATCCTGAAATACTAGATTTA+AGG 0.183872 8.4:+13791226 None:intergenic
GGGCCACAACCATTATATTT+TGG 0.187180 8.4:-13790559 MS.gene59046:CDS
CAATTCTTCTTGGTTGGTTC+TGG 0.203632 8.4:-13789895 MS.gene59046:CDS
TCTAGTCCCACAATTCTTCT+TGG 0.215898 8.4:-13789905 MS.gene59046:CDS
CATGGCAAGGTGGTGGCCTT+AGG 0.228266 8.4:+13791334 None:intergenic
TCACCTCTTCTACCCTTGTT+AGG 0.254401 8.4:+13790609 None:intergenic
TGGAATATGTTCTATTTCTA+TGG 0.255855 8.4:-13791049 MS.gene59046:CDS
ATTCTTCTTCTTCATCAGTT+TGG 0.266174 8.4:-13791136 MS.gene59046:CDS
TGGTTAGACTTCTACCAATA+TGG 0.274532 8.4:-13790580 MS.gene59046:CDS
AAATCTAGTATTTCAGGATT+TGG 0.277329 8.4:-13791222 MS.gene59046:CDS
GACAAGGATTTATATGGTTC+TGG 0.282095 8.4:-13790656 MS.gene59046:CDS
CAAGCCTGCCCTTGTTTATA+TGG 0.282158 8.4:+13789689 None:intergenic
ATAGATGGCTTAGGTTTCTT+AGG 0.284117 8.4:+13789589 None:intergenic
TTCTTCTTCTTCATCAGTTT+GGG 0.297438 8.4:-13791135 MS.gene59046:CDS
TCATTTCTCCTTTGTTTGCT+TGG 0.306256 8.4:-13791870 MS.gene59046:CDS
ACTTGGAAAATGTGGACAAT+AGG 0.330026 8.4:+13790961 None:intergenic
TGGAACCCAGCCACCAGTTT+TGG 0.334453 8.4:+13793391 None:intergenic
GTAAGTAGAAGTTGGGCTTA+TGG 0.338154 8.4:-13791069 MS.gene59046:CDS
ACTAGAAGGAAAACACTAAT+TGG 0.343468 8.4:+13789922 None:intergenic
CTTGGAAGATATAAAACAAT+TGG 0.344688 8.4:-13791825 MS.gene59046:CDS
ATACAGATACAAGAAGAGTT+TGG 0.356385 8.4:-13790989 MS.gene59046:CDS
GAGCATAGCTTCCAAGGGTT+TGG 0.361299 8.4:+13790632 None:intergenic
TAATACTGTGACTGACTTCA+TGG 0.374908 8.4:-13791898 MS.gene59046:CDS
CACCTCTTCTACCCTTGTTA+GGG 0.378746 8.4:+13790610 None:intergenic
CACCAGTTCCTAGTGCAATA+AGG 0.382180 8.4:+13791250 None:intergenic
TCAGTGGCAAAAGGCGTAAA+AGG 0.388045 8.4:-13789961 MS.gene59046:CDS
TTTCTAGCAGATTCCTTCCT+TGG 0.391028 8.4:-13791843 MS.gene59046:CDS
TACAGATACAAGAAGAGTTT+GGG 0.391432 8.4:-13790988 MS.gene59046:CDS
TTTCTCCTTTGTTTGCTTGG+AGG 0.391606 8.4:-13791867 MS.gene59046:CDS
TTATCGATGCAACAATAACT+TGG 0.394460 8.4:+13790944 None:intergenic
CGCTGGCTTGCAACTTTCAC+CGG 0.394881 8.4:+13791311 None:intergenic
CACTAATTGGTAGTGTTGTT+TGG 0.395122 8.4:+13789935 None:intergenic
ACCTAAGCCATCTATGCAAA+TGG 0.396355 8.4:-13789581 MS.gene59046:CDS
TGTTCTATTCTTGAATCCTC+TGG 0.397029 8.4:+13790868 None:intergenic
TCCTGATAGGAATATCAAAA+TGG 0.398389 8.4:+13791020 None:intergenic
AGAAGAATTGTGGGACTAGA+AGG 0.401620 8.4:+13789908 None:intergenic
CCCATTTGGATTCCATTCGC+TGG 0.403138 8.4:+13791294 None:intergenic
TCCATTCAATTTCTTCCAAA+GGG 0.406146 8.4:+13790382 None:intergenic
TACAAAGATCCAACATTGTA+TGG 0.407148 8.4:+13790901 None:intergenic
TCAGTTGTGAAGAAAGTAAC+TGG 0.409941 8.4:-13789742 MS.gene59046:CDS
CCCATTTGCATAGATGGCTT+AGG 0.413131 8.4:+13789580 None:intergenic
CCTAAGCCATCTATGCAAAT+GGG 0.414839 8.4:-13789580 MS.gene59046:CDS
AACATTCCTTTCCATGGTGG+TGG 0.417119 8.4:+13790496 None:intergenic
AAAGTTGATGAAACTAAGTA+TGG 0.422051 8.4:+13789645 None:intergenic
GTCCCACAATTCTTCTTGGT+TGG 0.423337 8.4:-13789901 MS.gene59046:CDS
GGAGATGCTGTGGACTATAA+AGG 0.424762 8.4:-13793431 MS.gene59046:CDS
CCCCTTTGGAAGAAATTGAA+TGG 0.428133 8.4:-13790383 MS.gene59046:CDS
TCCAAAGGGGCATGATGATT+CGG 0.430029 8.4:+13790396 None:intergenic
CTTGGAAAATGTGGACAATA+GGG 0.430738 8.4:+13790962 None:intergenic
ATGGCAAGGTGGTGGCCTTA+GGG 0.431567 8.4:+13791335 None:intergenic
TACCTTATTGCACTAGGAAC+TGG 0.433485 8.4:-13791252 MS.gene59046:CDS
ACCGAATCATCATGCCCCTT+TGG 0.434665 8.4:-13790397 MS.gene59046:CDS
TTCCTAACAACTTTATCCCT+CGG 0.445864 8.4:-13789790 MS.gene59046:CDS
ATAATGGTTGTGGCCCATAT+TGG 0.449007 8.4:+13790566 None:intergenic
TTCCATTCAATTTCTTCCAA+AGG 0.450602 8.4:+13790381 None:intergenic
TGTATCTTGTAGTTCCTGAT+AGG 0.454249 8.4:+13791007 None:intergenic
ATGGTTCTGGTCCAAACCCT+TGG 0.455816 8.4:-13790643 MS.gene59046:CDS
TAGAACACACTGAACAGTTC+CGG 0.459831 8.4:-13790852 MS.gene59046:intron
AAAGCAGCAATTGTGGTAGA+AGG 0.462361 8.4:-13790686 MS.gene59046:CDS
AAGATGAAGTAAGTAGAAGT+TGG 0.463675 8.4:-13791077 MS.gene59046:CDS
CATGGGGATTGCAGTCAACT+TGG 0.470281 8.4:-13791967 MS.gene59046:CDS
AAGAAAATGAGTTGGACTGT+TGG 0.470943 8.4:-13793452 MS.gene59046:CDS
ATAGGTCCAAAACTGGTGGC+TGG 0.475628 8.4:-13793397 MS.gene59046:CDS
ACAAGTATAAGACTCCCATT+TGG 0.476254 8.4:+13791280 None:intergenic
CCACCATGGAAAGGAATGTT+GGG 0.477357 8.4:-13790493 MS.gene59046:CDS
GTCCAATGGCGATCCTTTGT+AGG 0.479952 8.4:+13790040 None:intergenic
GCCAGCGAATGGAATCCAAA+TGG 0.480150 8.4:-13791295 MS.gene59046:CDS
AACCGAGGGATAAAGTTGTT+AGG 0.483555 8.4:+13789788 None:intergenic
AAACCTAAAATGAGAGCAGC+TGG 0.485394 8.4:+13793371 None:intergenic
GTTAGGGAGCATAGCTTCCA+AGG 0.486306 8.4:+13790626 None:intergenic
CCTGCTGATAGGTCCAAAAC+TGG 0.487711 8.4:-13793404 MS.gene59046:CDS
AGATGAAGTAAGTAGAAGTT+GGG 0.491479 8.4:-13791076 MS.gene59046:CDS
CTTCTCTGATTGAAGTGAAA+CGG 0.493028 8.4:-13789987 MS.gene59046:CDS
GTATTAGCTGCAGTTGAGCT+TGG 0.496577 8.4:+13791915 None:intergenic
ACCACCATGGAAAGGAATGT+TGG 0.499867 8.4:-13790494 MS.gene59046:CDS
AGGCCACCACCTTGCCATGC+CGG 0.501352 8.4:-13791330 MS.gene59046:CDS
TCACCGGCATGGCAAGGTGG+TGG 0.501918 8.4:+13791327 None:intergenic
GGTTAGACTTCTACCAATAT+GGG 0.502787 8.4:-13790579 MS.gene59046:CDS
ATTCCCAACATTCCTTTCCA+TGG 0.502865 8.4:+13790490 None:intergenic
ATAAAGGCTTCCCTGCTGAT+AGG 0.503532 8.4:-13793415 MS.gene59046:CDS
ATATGTGGTCCAAAATATAA+TGG 0.504670 8.4:+13790550 None:intergenic
GGAAGCTATGCTCCCTAACA+AGG 0.510403 8.4:-13790622 MS.gene59046:CDS
GCTTGCAACTTTCACCGGCA+TGG 0.511684 8.4:+13791316 None:intergenic
CAACAATAACTTGGAAAATG+TGG 0.519067 8.4:+13790953 None:intergenic
AACCAACCAAGAAGAATTGT+GGG 0.522670 8.4:+13789899 None:intergenic
TTGTTGCATCGATAAAGAAA+AGG 0.524528 8.4:-13790936 MS.gene59046:CDS
CCAGCGAATGGAATCCAAAT+GGG 0.527069 8.4:-13791294 MS.gene59046:CDS
TTCAGGAGAAGAAAATGAGT+TGG 0.527510 8.4:-13793460 MS.gene59046:intron
CAACTTGGTGACATATCTGA+TGG 0.528916 8.4:-13791952 MS.gene59046:CDS
GTTGAGAGGCTCTCCACCAT+GGG 0.533920 8.4:-13791984 MS.gene59046:CDS
AAAGTAACTGGGACTAGAGA+TGG 0.533924 8.4:-13789730 MS.gene59046:CDS
AACCTACAAAGGATCGCCAT+TGG 0.541778 8.4:-13790042 MS.gene59046:CDS
AAACGGTTGTCAGTGGCAAA+AGG 0.542160 8.4:-13789970 MS.gene59046:CDS
ATTTGATGAGAAAGATGAGA+AGG 0.544100 8.4:-13791190 MS.gene59046:CDS
CAAGGTGGTGGCCTTAGGGA+TGG 0.546240 8.4:+13791339 None:intergenic
ATCGATAAAGAAAAGGAAGA+TGG 0.547971 8.4:-13790929 MS.gene59046:CDS
GAACCAACCAAGAAGAATTG+TGG 0.548664 8.4:+13789898 None:intergenic
CTTTCTTCACAACTGACACA+AGG 0.551322 8.4:+13789749 None:intergenic
CAACTTTCACCGGCATGGCA+AGG 0.551655 8.4:+13791321 None:intergenic
AATGGCGATCCTTTGTAGGT+TGG 0.552334 8.4:+13790044 None:intergenic
GAAAGTTGCAAGCCAGCGAA+TGG 0.557492 8.4:-13791306 MS.gene59046:CDS
TAGGTCCAAAACTGGTGGCT+GGG 0.557758 8.4:-13793396 MS.gene59046:CDS
GGAATGAAAACAATGAGCAC+TGG 0.557973 8.4:-13789817 MS.gene59046:CDS
CCCAACATTCCTTTCCATGG+TGG 0.558781 8.4:+13790493 None:intergenic
GGTGGCTTGTTCAACTGAAA+AGG 0.560168 8.4:+13790514 None:intergenic
TTGGACTGTTGGAGATGCTG+TGG 0.560335 8.4:-13793441 MS.gene59046:CDS
TTTGTTGTCGGCATTAGGAA+TGG 0.561964 8.4:-13790016 MS.gene59046:CDS
CAACAAAACTGCCATCCCTA+AGG 0.563133 8.4:-13791350 MS.gene59046:CDS
TCGCTATACCTTATTGCACT+AGG 0.567669 8.4:-13791258 MS.gene59046:CDS
CTCCCTAACAAGGGTAGAAG+AGG 0.568939 8.4:-13790612 MS.gene59046:CDS
GGTAGAAGAGGTGAAAATGA+TGG 0.570599 8.4:-13790600 MS.gene59046:CDS
CTGACCATATAAACAAGGGC+AGG 0.573200 8.4:-13789693 MS.gene59046:CDS
TTAGCACTTCTCTTCAACTG+AGG 0.575499 8.4:+13789543 None:intergenic
ATGGAACTTCCATACAATGT+TGG 0.578930 8.4:-13790910 MS.gene59046:CDS
AAGACTGTAAGAGATCCTGC+AGG 0.581750 8.4:+13790458 None:intergenic
CAGGTTTCTCCAACCTACAA+AGG 0.589609 8.4:-13790053 MS.gene59046:CDS
CAGGGATTGAAATTGTTGAG+AGG 0.595947 8.4:-13791998 MS.gene59046:CDS
TGTTGAGAGGCTCTCCACCA+TGG 0.596962 8.4:-13791985 MS.gene59046:CDS
TTAGGGAGCATAGCTTCCAA+GGG 0.598967 8.4:+13790627 None:intergenic
CCATTCAATTTCTTCCAAAG+GGG 0.601053 8.4:+13790383 None:intergenic
AACAAGCCACCACCATGGAA+AGG 0.602040 8.4:-13790502 MS.gene59046:CDS
CTAAGCCATCTATGCAAATG+GGG 0.607318 8.4:-13789579 MS.gene59046:CDS
GGTCCAAAATATAATGGTTG+TGG 0.607933 8.4:+13790556 None:intergenic
CATTGACAGCAAGAGTGAGT+AGG 0.608376 8.4:+13790420 None:intergenic
TTCATAACACAATCACCGAA+AGG 0.608445 8.4:-13789838 MS.gene59046:CDS
CAAGTTGACTGCAATCCCCA+TGG 0.613410 8.4:+13791968 None:intergenic
AATACTGTGACTGACTTCAT+GGG 0.614676 8.4:-13791897 MS.gene59046:CDS
CAGTTGTGAAGAAAGTAACT+GGG 0.617673 8.4:-13789741 MS.gene59046:CDS
TTTGGAGAAAGCAGCAATTG+TGG 0.617695 8.4:-13790693 MS.gene59046:CDS
TGCCGACAACAAAAGTCCAA+TGG 0.629270 8.4:+13790026 None:intergenic
GAAAACCTCCAAGCAAACAA+AGG 0.632586 8.4:+13791862 None:intergenic
AACTTGGTGACATATCTGAT+GGG 0.635436 8.4:-13791951 MS.gene59046:CDS
CTTATTGCACTAGGAACTGG+TGG 0.635798 8.4:-13791249 MS.gene59046:CDS
AACTGCTGACAAAGAAACCG+AGG 0.639644 8.4:+13789773 None:intergenic
GGTGAAGCATTCATATACAC+AGG 0.650432 8.4:-13789874 MS.gene59046:CDS
GGTGATCATCTGTGCATATG+TGG 0.650446 8.4:+13790535 None:intergenic
CTTTCACCGGCATGGCAAGG+TGG 0.650465 8.4:+13791324 None:intergenic
GTTAGCTGACCATATAAACA+AGG 0.653849 8.4:-13789698 MS.gene59046:CDS
TTTGTATGATGACACTCCAG+AGG 0.663856 8.4:-13790884 MS.gene59046:CDS
TAAGCCATCTATGCAAATGG+GGG 0.669220 8.4:-13789578 MS.gene59046:CDS
AGTTGAACAAGCCACCACCA+TGG 0.672684 8.4:-13790507 MS.gene59046:CDS
GCTGATAGGTCCAAAACTGG+TGG 0.679277 8.4:-13793401 MS.gene59046:CDS
GGACTAGAGATGGACAAGGA+TGG 0.681786 8.4:-13789720 MS.gene59046:CDS
AGACTGTAAGAGATCCTGCA+GGG 0.682708 8.4:+13790459 None:intergenic
TTGAGAGGCTCTCCACCATG+GGG 0.683006 8.4:-13791983 MS.gene59046:CDS
GTTGACTGCAATCCCCATGG+TGG 0.689807 8.4:+13791971 None:intergenic
GAAGCTATGCTCCCTAACAA+GGG 0.690138 8.4:-13790621 MS.gene59046:CDS
TGAAGTGAAACGGTTGTCAG+TGG 0.692757 8.4:-13789977 MS.gene59046:CDS
ACTGCTGACAAAGAAACCGA+GGG 0.712734 8.4:+13789774 None:intergenic
TTAGCTGACCATATAAACAA+GGG 0.737538 8.4:-13789697 MS.gene59046:CDS
ACTGGGACTAGAGATGGACA+AGG 0.764137 8.4:-13789724 MS.gene59046:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAACAAAAACATTATTAT+TGG + chr8.4:13790117-13790136 None:intergenic 10.0%
!! TCTAAACTTAAAATAATAAA+TGG + chr8.4:13791595-13791614 None:intergenic 10.0%
!! TTATATTCTAATATTATCAA+CGG - chr8.4:13792805-13792824 MS.gene59046:intron 10.0%
!!! AATAATAATGTTTTTGTTTA+TGG - chr8.4:13790116-13790135 MS.gene59046:intron 10.0%
!!! TAAAAATTTAGTTTTACTTT+AGG - chr8.4:13790438-13790457 MS.gene59046:CDS 10.0%
!! GAATATTAATCTATTGAAAA+AGG + chr8.4:13790502-13790521 None:intergenic 15.0%
!! TAAAAAAATAGTGATGATTA+AGG + chr8.4:13790395-13790414 None:intergenic 15.0%
!! TAAAATTGATCTCTTATATT+AGG + chr8.4:13790982-13791001 None:intergenic 15.0%
!! TCACTATATTAAATTTAACT+TGG - chr8.4:13791674-13791693 MS.gene59046:intron 15.0%
!! TTACTAATAATAGATAACAT+GGG - chr8.4:13790170-13790189 MS.gene59046:intron 15.0%
!! TTTACTAATAATAGATAACA+TGG - chr8.4:13790169-13790188 MS.gene59046:intron 15.0%
!! TTTCGTGAATTTAATAAAAT+AGG - chr8.4:13790944-13790963 MS.gene59046:CDS 15.0%
!!! AAAACTAAATTTTTAGAAAG+TGG + chr8.4:13790433-13790452 None:intergenic 15.0%
!!! AACAAGTTCAATTTTTTAAA+AGG + chr8.4:13790694-13790713 None:intergenic 15.0%
!!! ACAAGTTCAATTTTTTAAAA+GGG + chr8.4:13790693-13790712 None:intergenic 15.0%
!!! ATTTTTGTCAAATAGTATTT+CGG + chr8.4:13791421-13791440 None:intergenic 15.0%
!!! TATATTAAATTTAACTTGGA+GGG - chr8.4:13791678-13791697 MS.gene59046:intron 15.0%
!!! TATTTTTAATTTCGCAATTT+TGG + chr8.4:13791393-13791412 None:intergenic 15.0%
!!! TTGAATTTTTTACAGTTTTT+TGG - chr8.4:13792376-13792395 MS.gene59046:intron 15.0%
!!! TTTTAAAAAATTGAACTTGT+TGG - chr8.4:13790693-13790712 MS.gene59046:CDS 15.0%
!! AAGTTTAGATACTAAATTGA+TGG - chr8.4:13791606-13791625 MS.gene59046:intron 20.0%
!! ATATAGTAAGATATTTGTGT+TGG + chr8.4:13790550-13790569 None:intergenic 20.0%
!! ATGCCATTATATTATTAACA+CGG + chr8.4:13790639-13790658 None:intergenic 20.0%
!! TATTTGACAAAAATAAGTCA+GGG - chr8.4:13791427-13791446 MS.gene59046:intron 20.0%
!! TGAAAAAAAACGAATATTGA+AGG + chr8.4:13790720-13790739 None:intergenic 20.0%
!! TTACATATTGTCAAAGTATA+AGG + chr8.4:13791527-13791546 None:intergenic 20.0%
!! TTATCCTTAGAATCAATATT+TGG + chr8.4:13790789-13790808 None:intergenic 20.0%
!!! AAATTTAGTTTTACTTTAGG+TGG - chr8.4:13790441-13790460 MS.gene59046:CDS 20.0%
!!! AATTTTATCTTCTTAAGAAG+AGG - chr8.4:13790995-13791014 MS.gene59046:CDS 20.0%
!!! CTATATTAAATTTAACTTGG+AGG - chr8.4:13791677-13791696 MS.gene59046:intron 20.0%
!!! GTCTAAAGTCATTATTTATA+GGG - chr8.4:13790846-13790865 MS.gene59046:intron 20.0%
!!! TAATTTTGAGGTTTAAATCT+TGG - chr8.4:13792941-13792960 MS.gene59046:intron 20.0%
!!! TCTCAATATTTATTGCATTT+TGG - chr8.4:13792847-13792866 MS.gene59046:intron 20.0%
!!! TTTTTTTTTTTCTCAGAAGA+AGG - chr8.4:13790752-13790771 MS.gene59046:intron 20.0%
! AAACTCTTTATAGTTCATGA+GGG - chr8.4:13789763-13789782 MS.gene59046:CDS 25.0%
! AAATCTAGTATTTCAGGATT+TGG - chr8.4:13791865-13791884 MS.gene59046:CDS 25.0%
! AAGAAATTGAATGGAAAAAC+AGG - chr8.4:13792713-13792732 MS.gene59046:intron 25.0%
! ATATGTATGACAAATGTTAG+TGG - chr8.4:13792911-13792930 MS.gene59046:intron 25.0%
! ATATGTGGTCCAAAATATAA+TGG + chr8.4:13792540-13792559 None:intergenic 25.0%
! ATCCCGTGTTAATAATATAA+TGG - chr8.4:13790633-13790652 MS.gene59046:CDS 25.0%
! ATCCTGAAATACTAGATTTA+AGG + chr8.4:13791864-13791883 None:intergenic 25.0%
! ATTGAAAAAGGACAAAATGT+AGG + chr8.4:13790490-13790509 None:intergenic 25.0%
! ATTTGACAAAAATAAGTCAG+GGG - chr8.4:13791428-13791447 MS.gene59046:intron 25.0%
! CATACATTGATACTAATGTT+TGG + chr8.4:13791641-13791660 None:intergenic 25.0%
! CTATTTGACAAAAATAAGTC+AGG - chr8.4:13791426-13791445 MS.gene59046:intron 25.0%
! CTTGGAAGATATAAAACAAT+TGG - chr8.4:13791262-13791281 MS.gene59046:CDS 25.0%
! GATGAAATCTTAGAGTATAA+TGG - chr8.4:13791049-13791068 MS.gene59046:CDS 25.0%
! GTAATTGATACTATTTCACA+TGG + chr8.4:13790265-13790284 None:intergenic 25.0%
! TAGTGATGATTAAGGTATAT+TGG + chr8.4:13790387-13790406 None:intergenic 25.0%
! TGCCATTATATTATTAACAC+GGG + chr8.4:13790638-13790657 None:intergenic 25.0%
!! CGTCTAAAGTCATTATTTAT+AGG - chr8.4:13790845-13790864 MS.gene59046:intron 25.0%
!! GAACTTTCCTAAAAAGTTTT+AGG - chr8.4:13789946-13789965 MS.gene59046:CDS 25.0%
!! TTTTATGTCCTCAATATTTC+AGG - chr8.4:13789610-13789629 MS.gene59046:CDS 25.0%
!!! AAAGTTGATGAAACTAAGTA+TGG + chr8.4:13793445-13793464 None:intergenic 25.0%
!!! ACATGTATGATCCATTTTTT+TGG - chr8.4:13789828-13789847 MS.gene59046:CDS 25.0%
!!! CAATTGTTTTATATCTTCCA+AGG + chr8.4:13791264-13791283 None:intergenic 25.0%
!!! GATTTTGACAAGGATTTATA+TGG - chr8.4:13792425-13792444 MS.gene59046:intron 25.0%
!!! TGGAATATGTTCTATTTCTA+TGG - chr8.4:13792038-13792057 MS.gene59046:intron 25.0%
!!! TTTGCCAAATATTGATTCTA+AGG - chr8.4:13790782-13790801 MS.gene59046:intron 25.0%
!!! TTTTGACTGAATTTCAGTTT+TGG + chr8.4:13791455-13791474 None:intergenic 25.0%
AACATCAAAGACTGATAGAT+AGG - chr8.4:13791545-13791564 MS.gene59046:intron 30.0%
AACTCTTTATAGTTCATGAG+GGG - chr8.4:13789764-13789783 MS.gene59046:CDS 30.0%
AAGATGAAGTAAGTAGAAGT+TGG - chr8.4:13792010-13792029 MS.gene59046:intron 30.0%
ACAAACCAAACGAATATTGA+AGG - chr8.4:13790234-13790253 MS.gene59046:intron 30.0%
ACGCCAAAAAATGTGAATTT+CGG + chr8.4:13790828-13790847 None:intergenic 30.0%
ACTAGAAGGAAAACACTAAT+TGG + chr8.4:13793168-13793187 None:intergenic 30.0%
AGATGAAGTAAGTAGAAGTT+GGG - chr8.4:13792011-13792030 MS.gene59046:intron 30.0%
ATACAGATACAAGAAGAGTT+TGG - chr8.4:13792098-13792117 MS.gene59046:intron 30.0%
ATCGATAAAGAAAAGGAAGA+TGG - chr8.4:13792158-13792177 MS.gene59046:intron 30.0%
ATTCTTCTTCTTCATCAGTT+TGG - chr8.4:13791951-13791970 MS.gene59046:CDS 30.0%
ATTTATAGGGCAAGAAACAT+GGG - chr8.4:13790859-13790878 MS.gene59046:CDS 30.0%
ATTTGATGAGAAAGATGAGA+AGG - chr8.4:13791897-13791916 MS.gene59046:CDS 30.0%
CAAACTCTTTATAGTTCATG+AGG - chr8.4:13789762-13789781 MS.gene59046:CDS 30.0%
CAACAATAACTTGGAAAATG+TGG + chr8.4:13792137-13792156 None:intergenic 30.0%
GAGAAAAAAGTGAGTAACAT+CGG + chr8.4:13792831-13792850 None:intergenic 30.0%
GGAAAAGTTCTCCAAAAAAA+TGG + chr8.4:13789842-13789861 None:intergenic 30.0%
GTAAATAGTTATGAGCTTAC+CGG + chr8.4:13792257-13792276 None:intergenic 30.0%
TACAAAGATCCAACATTGTA+TGG + chr8.4:13792189-13792208 None:intergenic 30.0%
TACAGATACAAGAAGAGTTT+GGG - chr8.4:13792099-13792118 MS.gene59046:intron 30.0%
TATAAACTGAGGAACATCAA+AGG + chr8.4:13792984-13793003 None:intergenic 30.0%
TATTTATAGGGCAAGAAACA+TGG - chr8.4:13790858-13790877 MS.gene59046:CDS 30.0%
TCCAACTATATCTAACTGAA+GGG + chr8.4:13792310-13792329 None:intergenic 30.0%
TCCATTCAATTTCTTCCAAA+GGG + chr8.4:13792708-13792727 None:intergenic 30.0%
TCCTGATAGGAATATCAAAA+TGG + chr8.4:13792070-13792089 None:intergenic 30.0%
TGAACTATAAAGAGTTTGAG+TGG + chr8.4:13789760-13789779 None:intergenic 30.0%
TTAGAAACACAGTGTGTATT+TGG - chr8.4:13789795-13789814 MS.gene59046:CDS 30.0%
TTAGCTGACCATATAAACAA+GGG - chr8.4:13793390-13793409 MS.gene59046:CDS 30.0%
TTATCGATGCAACAATAACT+TGG + chr8.4:13792146-13792165 None:intergenic 30.0%
TTCCATTCAATTTCTTCCAA+AGG + chr8.4:13792709-13792728 None:intergenic 30.0%
TTCTTCTTCTTCATCAGTTT+GGG - chr8.4:13791952-13791971 MS.gene59046:CDS 30.0%
TTTCTTCTCCTGAAATATTG+AGG + chr8.4:13789621-13789640 None:intergenic 30.0%
TTTGTCCTTCAATATTCGTT+TGG + chr8.4:13790242-13790261 None:intergenic 30.0%
! ACTACCTCCTAAAACTTTTT+AGG + chr8.4:13789956-13789975 None:intergenic 30.0%
! CATCAACTTTGTAGCATTTT+TGG - chr8.4:13793455-13793474 MS.gene59046:CDS 30.0%
! CTCATTGTTTTCATTCCTTT+CGG + chr8.4:13793267-13793286 None:intergenic 30.0%
! TAATGGCATATTTGCACTTT+TGG - chr8.4:13790650-13790669 MS.gene59046:CDS 30.0%
! TGTTTTATATCTTCCAAGGA+AGG + chr8.4:13791260-13791279 None:intergenic 30.0%
! TTGTTGCATCGATAAAGAAA+AGG - chr8.4:13792151-13792170 MS.gene59046:intron 30.0%
!! AATTTCTGTCACTTTCTGTT+TGG - chr8.4:13790305-13790324 MS.gene59046:intron 30.0%
!! AGTGGATTCTGTTAATTTTG+AGG - chr8.4:13792929-13792948 MS.gene59046:intron 30.0%
!! TAAATTTAACTTGGAGGGTA+TGG - chr8.4:13791683-13791702 MS.gene59046:intron 30.0%
!!! AAAAAGTTTTAGGAGGTAGT+TGG - chr8.4:13789956-13789975 MS.gene59046:CDS 30.0%
!!! AGACCGAAATTCACATTTTT+TGG - chr8.4:13790822-13790841 MS.gene59046:intron 30.0%
!!! CATTTTTGGTATGTGCATTT+TGG - chr8.4:13793469-13793488 MS.gene59046:intron 30.0%
!!! CTTTCCTAAAAAGTTTTAGG+AGG - chr8.4:13789949-13789968 MS.gene59046:CDS 30.0%
!!! TTGGAGACTTTTTTACAGTT+AGG - chr8.4:13792325-13792344 MS.gene59046:intron 30.0%
AACCAACCAAGAAGAATTGT+GGG + chr8.4:13793191-13793210 None:intergenic 35.0%
AATGCTCTTTGTTGAGAATC+AGG + chr8.4:13790590-13790609 None:intergenic 35.0%
ACAAGTATAAGACTCCCATT+TGG + chr8.4:13791810-13791829 None:intergenic 35.0%
ACTAATCGCTTCGAAATGTT+TGG + chr8.4:13791503-13791522 None:intergenic 35.0%
ACTCTTTATAGTTCATGAGG+GGG - chr8.4:13789765-13789784 MS.gene59046:CDS 35.0%
ACTTGGAAAATGTGGACAAT+AGG + chr8.4:13792129-13792148 None:intergenic 35.0%
ATAGATGGCTTAGGTTTCTT+AGG + chr8.4:13793501-13793520 None:intergenic 35.0%
ATGCTCTTTGTTGAGAATCA+GGG + chr8.4:13790589-13790608 None:intergenic 35.0%
ATGGAACTTCCATACAATGT+TGG - chr8.4:13792177-13792196 MS.gene59046:intron 35.0%
CAGTTGTGAAGAAAGTAACT+GGG - chr8.4:13793346-13793365 MS.gene59046:intron 35.0%
CCATTCAATTTCTTCCAAAG+GGG + chr8.4:13792707-13792726 None:intergenic 35.0%
CTCCAACTATATCTAACTGA+AGG + chr8.4:13792311-13792330 None:intergenic 35.0%
CTTCTCTGATTGAAGTGAAA+CGG - chr8.4:13793100-13793119 MS.gene59046:intron 35.0%
CTTGGAAAATGTGGACAATA+GGG + chr8.4:13792128-13792147 None:intergenic 35.0%
GACAAGGATTTATATGGTTC+TGG - chr8.4:13792431-13792450 MS.gene59046:intron 35.0%
GACTTGTCAAAACTGTTACA+GGG - chr8.4:13791071-13791090 MS.gene59046:CDS 35.0%
GAGACGGTGTAAGTTTATTT+CGG + chr8.4:13791356-13791375 None:intergenic 35.0%
GCTACTAACTAACTGTAACA+AGG - chr8.4:13790000-13790019 MS.gene59046:CDS 35.0%
GGCCTTAAATCTAGTATTTC+AGG - chr8.4:13791859-13791878 MS.gene59046:CDS 35.0%
GGTCCAAAATATAATGGTTG+TGG + chr8.4:13792534-13792553 None:intergenic 35.0%
GGTTAGACTTCTACCAATAT+GGG - chr8.4:13792508-13792527 MS.gene59046:intron 35.0%
GTTAGCTGACCATATAAACA+AGG - chr8.4:13793389-13793408 MS.gene59046:CDS 35.0%
TCAGTTGTGAAGAAAGTAAC+TGG - chr8.4:13793345-13793364 MS.gene59046:intron 35.0%
TCCCTTCAGTTAGATATAGT+TGG - chr8.4:13792306-13792325 MS.gene59046:intron 35.0%
TGGTTAGACTTCTACCAATA+TGG - chr8.4:13792507-13792526 MS.gene59046:intron 35.0%
TGTATCTTGTAGTTCCTGAT+AGG + chr8.4:13792083-13792102 None:intergenic 35.0%
TGTTCTATTCTTGAATCCTC+TGG + chr8.4:13792222-13792241 None:intergenic 35.0%
TTCAGGAGAAGAAAATGAGT+TGG - chr8.4:13789627-13789646 MS.gene59046:CDS 35.0%
TTCATAACACAATCACCGAA+AGG - chr8.4:13793249-13793268 MS.gene59046:intron 35.0%
TTCCTAACAACTTTATCCCT+CGG - chr8.4:13793297-13793316 MS.gene59046:intron 35.0%
! AACATGGGTGCAATGATTTT+GGG - chr8.4:13790185-13790204 MS.gene59046:intron 35.0%
! AACTTGGTGACATATCTGAT+GGG - chr8.4:13791136-13791155 MS.gene59046:CDS 35.0%
! AAGAAAATGAGTTGGACTGT+TGG - chr8.4:13789635-13789654 MS.gene59046:CDS 35.0%
! AATACTGTGACTGACTTCAT+GGG - chr8.4:13791190-13791209 MS.gene59046:CDS 35.0%
! CTTTTCTGCAATACAAACAC+TGG - chr8.4:13791288-13791307 MS.gene59046:CDS 35.0%
! TAACATGGGTGCAATGATTT+TGG - chr8.4:13790184-13790203 MS.gene59046:intron 35.0%
! TAATACTGTGACTGACTTCA+TGG - chr8.4:13791189-13791208 MS.gene59046:CDS 35.0%
! TAGTCCTCAATCGAACTTTT+TGG + chr8.4:13790923-13790942 None:intergenic 35.0%
! TCATTTCTCCTTTGTTTGCT+TGG - chr8.4:13791217-13791236 MS.gene59046:CDS 35.0%
!! CACTAATTGGTAGTGTTGTT+TGG + chr8.4:13793155-13793174 None:intergenic 35.0%
!! GCCATTTTGATATTCCTATC+AGG - chr8.4:13792066-13792085 MS.gene59046:intron 35.0%
!! TGAAGGAGGATTTTTAGAGA+AGG + chr8.4:13789863-13789882 None:intergenic 35.0%
!! TGTCACTTTCTGTTTGGATT+GGG - chr8.4:13790311-13790330 MS.gene59046:intron 35.0%
AAACCTAAAATGAGAGCAGC+TGG + chr8.4:13789719-13789738 None:intergenic 40.0%
AAAGCAGCAATTGTGGTAGA+AGG - chr8.4:13792401-13792420 MS.gene59046:intron 40.0%
AAAGTAACTGGGACTAGAGA+TGG - chr8.4:13793357-13793376 MS.gene59046:intron 40.0%
AACCGAGGGATAAAGTTGTT+AGG + chr8.4:13793302-13793321 None:intergenic 40.0%
ACCTAAGCCATCTATGCAAA+TGG - chr8.4:13793506-13793525 MS.gene59046:intron 40.0%
ACCTGCGATACATAGAAAAC+AGG + chr8.4:13793019-13793038 None:intergenic 40.0%
ACGGTGTAAGTTTATTTCGG+TGG + chr8.4:13791353-13791372 None:intergenic 40.0%
AGAAGAATTGTGGGACTAGA+AGG + chr8.4:13793182-13793201 None:intergenic 40.0%
ATAATGGTTGTGGCCCATAT+TGG + chr8.4:13792524-13792543 None:intergenic 40.0%
ATTCCCAACATTCCTTTCCA+TGG + chr8.4:13792600-13792619 None:intergenic 40.0%
CAGGGATTGAAATTGTTGAG+AGG - chr8.4:13791089-13791108 MS.gene59046:CDS 40.0%
CCTAAGCCATCTATGCAAAT+GGG - chr8.4:13793507-13793526 MS.gene59046:intron 40.0%
CTAAGCCATCTATGCAAATG+GGG - chr8.4:13793508-13793527 MS.gene59046:intron 40.0%
CTGAGACATAGACATAGACA+AGG - chr8.4:13789896-13789915 MS.gene59046:CDS 40.0%
CTTGTCTATGTCTATGTCTC+AGG + chr8.4:13789898-13789917 None:intergenic 40.0%
CTTTCTTCACAACTGACACA+AGG + chr8.4:13793341-13793360 None:intergenic 40.0%
GAAAACCTCCAAGCAAACAA+AGG + chr8.4:13791228-13791247 None:intergenic 40.0%
GAACCAACCAAGAAGAATTG+TGG + chr8.4:13793192-13793211 None:intergenic 40.0%
GACACCAAAAAGTTCGATTG+AGG - chr8.4:13790916-13790935 MS.gene59046:CDS 40.0%
GGAATGAAAACAATGAGCAC+TGG - chr8.4:13793270-13793289 MS.gene59046:intron 40.0%
GGACTTGTCAAAACTGTTAC+AGG - chr8.4:13791070-13791089 MS.gene59046:CDS 40.0%
GGTAGAAGAGGTGAAAATGA+TGG - chr8.4:13792487-13792506 MS.gene59046:intron 40.0%
GTAAGTAGAAGTTGGGCTTA+TGG - chr8.4:13792018-13792037 MS.gene59046:intron 40.0%
TAAGCCATCTATGCAAATGG+GGG - chr8.4:13793509-13793528 MS.gene59046:intron 40.0%
TACCTTATTGCACTAGGAAC+TGG - chr8.4:13791835-13791854 MS.gene59046:CDS 40.0%
TAGAACACACTGAACAGTTC+CGG - chr8.4:13792235-13792254 MS.gene59046:intron 40.0%
TCGCTATACCTTATTGCACT+AGG - chr8.4:13791829-13791848 MS.gene59046:CDS 40.0%
TCTAGTCCCACAATTCTTCT+TGG - chr8.4:13793182-13793201 MS.gene59046:intron 40.0%
TTAGCACTTCTCTTCAACTG+AGG + chr8.4:13793547-13793566 None:intergenic 40.0%
TTTGGAGAAAGCAGCAATTG+TGG - chr8.4:13792394-13792413 MS.gene59046:intron 40.0%
TTTGTATGATGACACTCCAG+AGG - chr8.4:13792203-13792222 MS.gene59046:intron 40.0%
! ACACAGTGTGTATTTGGTGA+TGG - chr8.4:13789801-13789820 MS.gene59046:CDS 40.0%
! ACATGGGTGCAATGATTTTG+GGG - chr8.4:13790186-13790205 MS.gene59046:intron 40.0%
! ACTTTAGGTGGCTTTTAGCA+TGG - chr8.4:13790453-13790472 MS.gene59046:CDS 40.0%
! AGGTCAGTTGGTATAAACTG+AGG + chr8.4:13792995-13793014 None:intergenic 40.0%
! CAACTTGGTGACATATCTGA+TGG - chr8.4:13791135-13791154 MS.gene59046:CDS 40.0%
! CAATTCTTCTTGGTTGGTTC+TGG - chr8.4:13793192-13793211 MS.gene59046:intron 40.0%
! CCCCTTTGGAAGAAATTGAA+TGG - chr8.4:13792704-13792723 MS.gene59046:intron 40.0%
! GGGCCACAACCATTATATTT+TGG - chr8.4:13792528-13792547 MS.gene59046:intron 40.0%
! GGTGAAGCATTCATATACAC+AGG - chr8.4:13793213-13793232 MS.gene59046:intron 40.0%
! GTCACTTTCTGTTTGGATTG+GGG - chr8.4:13790312-13790331 MS.gene59046:intron 40.0%
! TCACTTTCTGTTTGGATTGG+GGG - chr8.4:13790313-13790332 MS.gene59046:intron 40.0%
! TTTCTAGCAGATTCCTTCCT+TGG - chr8.4:13791244-13791263 MS.gene59046:CDS 40.0%
! TTTCTCCTTTGTTTGCTTGG+AGG - chr8.4:13791220-13791239 MS.gene59046:CDS 40.0%
! TTTGTTGTCGGCATTAGGAA+TGG - chr8.4:13793071-13793090 MS.gene59046:intron 40.0%
!! CTGTCACTTTCTGTTTGGAT+TGG - chr8.4:13790310-13790329 MS.gene59046:intron 40.0%
!! GGTAGAAGGTGATTTTGACA+AGG - chr8.4:13792415-13792434 MS.gene59046:intron 40.0%
!! TCAAAGGAGTACTAACTAGC+AGG + chr8.4:13792968-13792987 None:intergenic 40.0%
AAACGGTTGTCAGTGGCAAA+AGG - chr8.4:13793117-13793136 MS.gene59046:intron 45.0%
AACATTCCTTTCCATGGTGG+TGG + chr8.4:13792594-13792613 None:intergenic 45.0%
AACCTACAAAGGATCGCCAT+TGG - chr8.4:13793045-13793064 MS.gene59046:intron 45.0%
AACTGCTGACAAAGAAACCG+AGG + chr8.4:13793317-13793336 None:intergenic 45.0%
AAGACTGTAAGAGATCCTGC+AGG + chr8.4:13792632-13792651 None:intergenic 45.0%
AATGGCGATCCTTTGTAGGT+TGG + chr8.4:13793046-13793065 None:intergenic 45.0%
ACCACCATGGAAAGGAATGT+TGG - chr8.4:13792593-13792612 MS.gene59046:intron 45.0%
ACTGCTGACAAAGAAACCGA+GGG + chr8.4:13793316-13793335 None:intergenic 45.0%
AGACTGTAAGAGATCCTGCA+GGG + chr8.4:13792631-13792650 None:intergenic 45.0%
ATAAAGGCTTCCCTGCTGAT+AGG - chr8.4:13789672-13789691 MS.gene59046:CDS 45.0%
ATAGGGCAAGAAACATGGGT+TGG - chr8.4:13790863-13790882 MS.gene59046:CDS 45.0%
ATGCAAATGGGGGCAATCAA+TGG - chr8.4:13793519-13793538 MS.gene59046:intron 45.0%
ATTGCCCCCATTTGCATAGA+TGG + chr8.4:13793516-13793535 None:intergenic 45.0%
CAACAAAACTGCCATCCCTA+AGG - chr8.4:13791737-13791756 MS.gene59046:intron 45.0%
CACCAGTTCCTAGTGCAATA+AGG + chr8.4:13791840-13791859 None:intergenic 45.0%
CACCTCTTCTACCCTTGTTA+GGG + chr8.4:13792480-13792499 None:intergenic 45.0%
CAGGTTTCTCCAACCTACAA+AGG - chr8.4:13793034-13793053 MS.gene59046:intron 45.0%
CATTGACAGCAAGAGTGAGT+AGG + chr8.4:13792670-13792689 None:intergenic 45.0%
CCACCATGGAAAGGAATGTT+GGG - chr8.4:13792594-13792613 MS.gene59046:intron 45.0%
CCAGCGAATGGAATCCAAAT+GGG - chr8.4:13791793-13791812 MS.gene59046:intron 45.0%
CCCATTTGCATAGATGGCTT+AGG + chr8.4:13793510-13793529 None:intergenic 45.0%
CTGACCATATAAACAAGGGC+AGG - chr8.4:13793394-13793413 MS.gene59046:CDS 45.0%
CTTATTGCACTAGGAACTGG+TGG - chr8.4:13791838-13791857 MS.gene59046:CDS 45.0%
GAAGCTATGCTCCCTAACAA+GGG - chr8.4:13792466-13792485 MS.gene59046:intron 45.0%
GCGATACATAGAAAACAGGC+AGG + chr8.4:13793015-13793034 None:intergenic 45.0%
GGTGATCATCTGTGCATATG+TGG + chr8.4:13792555-13792574 None:intergenic 45.0%
GTATTAGCTGCAGTTGAGCT+TGG + chr8.4:13791175-13791194 None:intergenic 45.0%
GTCCCACAATTCTTCTTGGT+TGG - chr8.4:13793186-13793205 MS.gene59046:intron 45.0%
TACACCGTCTCTCCTACTTA+GGG - chr8.4:13791365-13791384 MS.gene59046:CDS 45.0%
TAGAAAACAGGCAGGTCAGT+TGG + chr8.4:13793007-13793026 None:intergenic 45.0%
TAGGGCAAGAAACATGGGTT+GGG - chr8.4:13790864-13790883 MS.gene59046:CDS 45.0%
TCACCTCTTCTACCCTTGTT+AGG + chr8.4:13792481-13792500 None:intergenic 45.0%
TCAGGCTACTGTTGCAATGA+AGG + chr8.4:13789880-13789899 None:intergenic 45.0%
TGAAGTGAAACGGTTGTCAG+TGG - chr8.4:13793110-13793129 MS.gene59046:intron 45.0%
TGCCGACAACAAAAGTCCAA+TGG + chr8.4:13793064-13793083 None:intergenic 45.0%
TTACACCGTCTCTCCTACTT+AGG - chr8.4:13791364-13791383 MS.gene59046:CDS 45.0%
! CAAGCCTGCCCTTGTTTATA+TGG + chr8.4:13793401-13793420 None:intergenic 45.0%
! CACTTTCTGTTTGGATTGGG+GGG - chr8.4:13790314-13790333 MS.gene59046:intron 45.0%
! CATGGGTGCAATGATTTTGG+GGG - chr8.4:13790187-13790206 MS.gene59046:intron 45.0%
! GCCTGTTTTCTATGTATCGC+AGG - chr8.4:13793015-13793034 MS.gene59046:intron 45.0%
! GGAGATGCTGTGGACTATAA+AGG - chr8.4:13789656-13789675 MS.gene59046:CDS 45.0%
! GGGAATTTTCAAATCCCTGC+AGG - chr8.4:13792614-13792633 MS.gene59046:intron 45.0%
! GTTCCAGCTGCTCTCATTTT+AGG - chr8.4:13789713-13789732 MS.gene59046:CDS 45.0%
! TCAGTGGCAAAAGGCGTAAA+AGG - chr8.4:13793126-13793145 MS.gene59046:intron 45.0%
! TCCAAAGGGGCATGATGATT+CGG + chr8.4:13792694-13792713 None:intergenic 45.0%
! TGGAGGGTATGGTGATTTCA+GGG - chr8.4:13791694-13791713 MS.gene59046:intron 45.0%
! TTAGGGAGCATAGCTTCCAA+GGG + chr8.4:13792463-13792482 None:intergenic 45.0%
! TTGGAGGGTATGGTGATTTC+AGG - chr8.4:13791693-13791712 MS.gene59046:intron 45.0%
!! CGCCATTGGACTTTTGTTGT+CGG - chr8.4:13793059-13793078 MS.gene59046:intron 45.0%
!! GCAATTTTGGTCCCCTAAGT+AGG + chr8.4:13791380-13791399 None:intergenic 45.0%
!! GGACTTTTGTTGTCGGCATT+AGG - chr8.4:13793066-13793085 MS.gene59046:intron 45.0%
!! GGTGGCTTGTTCAACTGAAA+AGG + chr8.4:13792576-13792595 None:intergenic 45.0%
!!! CAGTTTTGGACCTATCAGCA+GGG + chr8.4:13789685-13789704 None:intergenic 45.0%
AACAAGCCACCACCATGGAA+AGG - chr8.4:13792585-13792604 MS.gene59046:intron 50.0%
ACACCGTCTCTCCTACTTAG+GGG - chr8.4:13791366-13791385 MS.gene59046:CDS 50.0%
ACCGAATCATCATGCCCCTT+TGG - chr8.4:13792690-13792709 MS.gene59046:intron 50.0%
ACTGGGACTAGAGATGGACA+AGG - chr8.4:13793363-13793382 MS.gene59046:intron 50.0%
AGTTGAACAAGCCACCACCA+TGG - chr8.4:13792580-13792599 MS.gene59046:intron 50.0%
ATAGGTCCAAAACTGGTGGC+TGG - chr8.4:13789690-13789709 MS.gene59046:CDS 50.0%
CATGGGGATTGCAGTCAACT+TGG - chr8.4:13791120-13791139 MS.gene59046:CDS 50.0%
CCCAACATTCCTTTCCATGG+TGG + chr8.4:13792597-13792616 None:intergenic 50.0%
CCCATTTGGATTCCATTCGC+TGG + chr8.4:13791796-13791815 None:intergenic 50.0%
CCTGCTGATAGGTCCAAAAC+TGG - chr8.4:13789683-13789702 MS.gene59046:CDS 50.0%
CTCCCTAACAAGGGTAGAAG+AGG - chr8.4:13792475-13792494 MS.gene59046:intron 50.0%
GAAAGTTGCAAGCCAGCGAA+TGG - chr8.4:13791781-13791800 MS.gene59046:intron 50.0%
GAGCATAGCTTCCAAGGGTT+TGG + chr8.4:13792458-13792477 None:intergenic 50.0%
GCCAGCGAATGGAATCCAAA+TGG - chr8.4:13791792-13791811 MS.gene59046:intron 50.0%
GCTGATAGGTCCAAAACTGG+TGG - chr8.4:13789686-13789705 MS.gene59046:CDS 50.0%
GGAAGCTATGCTCCCTAACA+AGG - chr8.4:13792465-13792484 MS.gene59046:intron 50.0%
GGACTAGAGATGGACAAGGA+TGG - chr8.4:13793367-13793386 MS.gene59046:intron 50.0%
GGCTACTGTTGCAATGAAGG+AGG + chr8.4:13789877-13789896 None:intergenic 50.0%
GGGGGTTATGATTGCATCTG+AGG - chr8.4:13790205-13790224 MS.gene59046:intron 50.0%
GTCCAATGGCGATCCTTTGT+AGG + chr8.4:13793050-13793069 None:intergenic 50.0%
TAGGTCCAAAACTGGTGGCT+GGG - chr8.4:13789691-13789710 MS.gene59046:CDS 50.0%
TTGGACTGTTGGAGATGCTG+TGG - chr8.4:13789646-13789665 MS.gene59046:CDS 50.0%
! CAAGTTGACTGCAATCCCCA+TGG + chr8.4:13791122-13791141 None:intergenic 50.0%
! GTTAGGGAGCATAGCTTCCA+AGG + chr8.4:13792464-13792483 None:intergenic 50.0%
!! ATGGTTCTGGTCCAAACCCT+TGG - chr8.4:13792444-13792463 MS.gene59046:intron 50.0%
!!! CCAGTTTTGGACCTATCAGC+AGG + chr8.4:13789686-13789705 None:intergenic 50.0%
CAACTTTCACCGGCATGGCA+AGG + chr8.4:13791769-13791788 None:intergenic 55.0%
GCTTGCAACTTTCACCGGCA+TGG + chr8.4:13791774-13791793 None:intergenic 55.0%
GGTCCCCTAAGTAGGAGAGA+CGG + chr8.4:13791372-13791391 None:intergenic 55.0%
GTTGACTGCAATCCCCATGG+TGG + chr8.4:13791119-13791138 None:intergenic 55.0%
GTTGAGAGGCTCTCCACCAT+GGG - chr8.4:13791103-13791122 MS.gene59046:CDS 55.0%
TGTTGAGAGGCTCTCCACCA+TGG - chr8.4:13791102-13791121 MS.gene59046:CDS 55.0%
TTGAGAGGCTCTCCACCATG+GGG - chr8.4:13791104-13791123 MS.gene59046:CDS 55.0%
! ATGGCAAGGTGGTGGCCTTA+GGG + chr8.4:13791755-13791774 None:intergenic 55.0%
! TGGAACCCAGCCACCAGTTT+TGG + chr8.4:13789699-13789718 None:intergenic 55.0%
!! CGCTGGCTTGCAACTTTCAC+CGG + chr8.4:13791779-13791798 None:intergenic 55.0%
CTTTCACCGGCATGGCAAGG+TGG + chr8.4:13791766-13791785 None:intergenic 60.0%
! CAAGGTGGTGGCCTTAGGGA+TGG + chr8.4:13791751-13791770 None:intergenic 60.0%
! CATGGCAAGGTGGTGGCCTT+AGG + chr8.4:13791756-13791775 None:intergenic 60.0%
AGGCCACCACCTTGCCATGC+CGG - chr8.4:13791757-13791776 MS.gene59046:intron 65.0%
TCACCGGCATGGCAAGGTGG+TGG + chr8.4:13791763-13791782 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 13789543 13793566 13789543 ID=MS.gene59046
chr8.4 mRNA 13789543 13793566 13789543 ID=MS.gene59046.t1;Parent=MS.gene59046
chr8.4 exon 13793564 13793566 13793564 ID=MS.gene59046.t1.exon1;Parent=MS.gene59046.t1
chr8.4 CDS 13793564 13793566 13793564 ID=cds.MS.gene59046.t1;Parent=MS.gene59046.t1
chr8.4 exon 13793375 13793477 13793375 ID=MS.gene59046.t1.exon2;Parent=MS.gene59046.t1
chr8.4 CDS 13793375 13793477 13793375 ID=cds.MS.gene59046.t1;Parent=MS.gene59046.t1
chr8.4 exon 13791800 13792017 13791800 ID=MS.gene59046.t1.exon3;Parent=MS.gene59046.t1
chr8.4 CDS 13791800 13792017 13791800 ID=cds.MS.gene59046.t1;Parent=MS.gene59046.t1
chr8.4 exon 13790853 13791394 13790853 ID=MS.gene59046.t1.exon4;Parent=MS.gene59046.t1
chr8.4 CDS 13790853 13791394 13790853 ID=cds.MS.gene59046.t1;Parent=MS.gene59046.t1
chr8.4 exon 13790375 13790718 13790375 ID=MS.gene59046.t1.exon5;Parent=MS.gene59046.t1
chr8.4 CDS 13790375 13790718 13790375 ID=cds.MS.gene59046.t1;Parent=MS.gene59046.t1
chr8.4 exon 13789543 13790072 13789543 ID=MS.gene59046.t1.exon6;Parent=MS.gene59046.t1
chr8.4 CDS 13789543 13790072 13789543 ID=cds.MS.gene59046.t1;Parent=MS.gene59046.t1
Gene Sequence

>MS.gene59046

ATGGTTAGTTTTTGGTCAATGGAAGCTTTAACAAACTTATGAGATTTTCTCTTTTTTTATATAAATATTTTATGTCCTCAATATTTCAGGAGAAGAAAATGAGTTGGACTGTTGGAGATGCTGTGGACTATAAAGGCTTCCCTGCTGATAGGTCCAAAACTGGTGGCTGGGTTCCAGCTGCTCTCATTTTAGGTTTGTTACACTTCTAGCATAACCACTCAAACTCTTTATAGTTCATGAGGGGGTGTAGAATTAGAAACACAGTGTGTATTTGGTGATGGTGTTACATGTATGATCCATTTTTTTGGAGAACTTTTCCTTCTCTAAAAATCCTCCTTCATTGCAACAGTAGCCTGAGACATAGACATAGACAAGGCTTGACTTTAATACACATGATTATCATGAACTTTCCTAAAAAGTTTTAGGAGGTAGTTGGATCTCATAAATGATTTTAATTGCTACTAACTAACTGTAACAAGGTTTTAGTACATGTGTTACATTTATATAATTTTGATTTCTCTTAAACTGTTTATGACTTTACAACATCAGAAAATTACAATTATTTTTTGATCCAATAATAATGTTTTTGTTTATGGACAGTAATTTTGTTATCATATGTAAATTATTTTACTAATAATAGATAACATGGGTGCAATGATTTTGGGGGTTATGATTGCATCTGAGGAAGAAGACAAACCAAACGAATATTGAAGGACAAACCATGTGAAATAGTATCAATTACAGTCTTATAGCACATGAAACAATTTCTGTCACTTTCTGTTTGGATTGGGGGGAAAGAGCATAATATTATATTTAAGCTTTTTAGATGTGAATTAAGATACCAATATACCTTAATCATCACTATTTTTTTATCTTATCTTATTGTTCCACTTTCTAAAAATTTAGTTTTACTTTAGGTGGCTTTTAGCATGGACTACTTTGTTCCTACATTTTGTCCTTTTTCAATAGATTAATATTCACTTTTTACTTACAATATCTGCTTACCAACACAAATATCTTACTATATTGCACTGAGCTAATCACCCTGATTCTCAACAAAGAGCATTAAAACTGAAAAGCTTAAGAAAATATCCCGTGTTAATAATATAATGGCATATTTGCACTTTTGGTTGCTAAAAAGAATAGTCCCTTTTAAAAAATTGAACTTGTTGGTCCTTCAATATTCGTTTTTTTTCACTTGTTAGTCTATTTTTTTTTTTCTCAGAAGAAGGTGATATATTTGCCAAATATTGATTCTAAGGATAAAATATCACTTTTGAGACCGAAATTCACATTTTTTGGCGTCTAAAGTCATTATTTATAGGGCAAGAAACATGGGTTGGGACTAAAATTGCAATAAATGTAAAAATAAAGACACCAAAAAGTTCGATTGAGGACTATTTTCGTGAATTTAATAAAATAGGAGAATCAATAAGCCTAATATAAGAGATCAATTTTATCTTCTTAAGAAGAGGTTGTTAGAATAAATAAAAAGTTACTGTGAATGATGAAATCTTAGAGTATAATGGACTTGTCAAAACTGTTACAGGGATTGAAATTGTTGAGAGGCTCTCCACCATGGGGATTGCAGTCAACTTGGTGACATATCTGATGGGAGTCATGCATCTGCCAAGCTCAACTGCAGCTAATACTGTGACTGACTTCATGGGCACATCATTTCTCCTTTGTTTGCTTGGAGGTTTTCTAGCAGATTCCTTCCTTGGAAGATATAAAACAATTGGAATCTTTTCTGCAATACAAACACTGGTTAGTTACATTACTACTAGTTCTAAGCTTCATTTATATTCCACCGAAATAAACTTACACCGTCTCTCCTACTTAGGGGACCAAAATTGCGAAATTAAAAATATGAGACCGAAATACTATTTGACAAAAATAAGTCAGGGGACCAAAACTGAAATTCAGTCAAAACAATAAATAGTTTCTACTATTTGTTCCAAACATTTCGAAGCGATTAGTTCCTTATACTTTGACAATATGTAACATCAAAGACTGATAGATAGGACACATGTGACAAAATGTACGAGACCATTTATTATTTTAAGTTTAGATACTAAATTGATGGTTACTCGAACCAAACATTAGTATCAATGTATGTGTTATTAGTTTCTCACTATATTAAATTTAACTTGGAGGGTATGGTGATTTCAGGGTACTGCAGCATTAGCAATCTCAACAAAACTGCCATCCCTAAGGCCACCACCTTGCCATGCCGGTGAAAGTTGCAAGCCAGCGAATGGAATCCAAATGGGAGTCTTATACTTGTCGCTATACCTTATTGCACTAGGAACTGGTGGCCTTAAATCTAGTATTTCAGGATTTGGTTCTGATCAATTTGATGAGAAAGATGAGAAGGAGAAATCACAAATGACTTTTTTCTTCAATAGATTCTTCTTCTTCATCAGTTTGGGAACTCTTGCAGCTGTCACAATACTTGTTTACATACAAGATGAAGTAAGTAGAAGTTGGGCTTATGGAATATGTTCTATTTCTATGGTCATAGCCATTTTGATATTCCTATCAGGAACTACAAGATACAGATACAAGAAGAGTTTGGGAAGCCCTATTGTCCACATTTTCCAAGTTATTGTTGCATCGATAAAGAAAAGGAAGATGGAACTTCCATACAATGTTGGATCTTTGTATGATGACACTCCAGAGGATTCAAGAATAGAACACACTGAACAGTTCCGGTAAGCTCATAACTATTTACACTATCACGATTCACTGCATATCAATTACTCCCTTCAGTTAGATATAGTTGGAGACTTTTTTACAGTTAGGATCACTCTTCTTTTCTGTTTCTAATACTTTGAATTTTTTACAGTTTTTTGGAGAAAGCAGCAATTGTGGTAGAAGGTGATTTTGACAAGGATTTATATGGTTCTGGTCCAAACCCTTGGAAGCTATGCTCCCTAACAAGGGTAGAAGAGGTGAAAATGATGGTTAGACTTCTACCAATATGGGCCACAACCATTATATTTTGGACCACATATGCACAGATGATCACCTTTTCAGTTGAACAAGCCACCACCATGGAAAGGAATGTTGGGAATTTTCAAATCCCTGCAGGATCTCTTACAGTCTTCTTTGTCATCGCAATCCTACTCACTCTTGCTGTCAATGACCGAATCATCATGCCCCTTTGGAAGAAATTGAATGGAAAAACAGGTTTAAAACTACTCGATCTGTTATGCATATAACATCAACTATTAATTTAATAATTTATACAATGAATATTTTATATTCTAATATTATCAACGGCCGATGTTACTCACTTTTTTCTCAATATTTATTGCATTTTGGCTTTTTGAAAAAATAAAAACTAACATATTACATATATATGTATATGTATGACAAATGTTAGTGGATTCTGTTAATTTTGAGGTTTAAATCTTGGACCTGCTAGTTAGTACTCCTTTGATGTTCCTCAGTTTATACCAACTGACCTGCCTGTTTTCTATGTATCGCAGGTTTCTCCAACCTACAAAGGATCGCCATTGGACTTTTGTTGTCGGCATTAGGAATGGCAGCTGCTTCTCTGATTGAAGTGAAACGGTTGTCAGTGGCAAAAGGCGTAAAAGGCAACCAAACAACACTACCAATTAGTGTTTTCCTTCTAGTCCCACAATTCTTCTTGGTTGGTTCTGGTGAAGCATTCATATACACAGGACAACTTGATTTCTTCATAACACAATCACCGAAAGGAATGAAAACAATGAGCACTGGTCTCTTCCTAACAACTTTATCCCTCGGTTTCTTTGTCAGCAGTTTCCTTGTGTCAGTTGTGAAGAAAGTAACTGGGACTAGAGATGGACAAGGATGGTTAGCTGACCATATAAACAAGGGCAGGCTTGACTTGTTCTATGCACTTCTTACCATACTTAGTTTCATCAACTTTGTAGCATTTTTGGTATGTGCATTTTGGTATAAGCCTAAGAAACCTAAGCCATCTATGCAAATGGGGGCAATCAATGGATCCTCAGTTGAAGAGAAGTGCTAA
Protein sequence

>MS.gene59046.t1

MEKKMSWTVGDAVDYKGFPADRSKTGGWVPAALILGIEIVERLSTMGIAVNLVTYLMGVMHLPSSTAANTVTDFMGTSFLLCLLGGFLADSFLGRYKTIGIFSAIQTLGTAALAISTKLPSLRPPPCHAGESCKPANGIQMGVLYLSLYLIALGTGGLKSSISGFGSDQFDEKDEKEKSQMTFFFNRFFFFISLGTLAAVTILVYIQDEVSRSWAYGICSISMVIAILIFLSGTTRYRYKKSLGSPIVHIFQVIVASIKKRKMELPYNVGSLYDDTPEDSRIEHTEQFRFLEKAAIVVEGDFDKDLYGSGPNPWKLCSLTRVEEVKMMVRLLPIWATTIIFWTTYAQMITFSVEQATTMERNVGNFQIPAGSLTVFFVIAILLTLAVNDRIIMPLWKKLNGKTGFSNLQRIAIGLLLSALGMAAASLIEVKRLSVAKGVKGNQTTLPISVFLLVPQFFLVGSGEAFIYTGQLDFFITQSPKGMKTMSTGLFLTTLSLGFFVSSFLVSVVKKVTGTRDGQGWLADHINKGRLDLFYALLTILSFINFVAFLVCAFWYKPKKPKPSMQMGAINGSSVEEKC