AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028221

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028221.t1 MTR_3g462710 65.018 566 193 4 21 584 2 564 0.0 752
MS.gene028221.t1 MTR_7g067010 63.298 564 202 5 22 584 3 562 0.0 739
MS.gene028221.t1 MTR_4g015080 62.324 568 209 5 20 586 11 574 0.0 736
MS.gene028221.t1 MTR_3g462710 65.652 460 149 5 129 584 1 455 0.0 598
MS.gene028221.t1 MTR_7g098200 45.878 558 290 3 26 578 12 562 0.0 535
MS.gene028221.t1 MTR_3g112460 46.914 567 286 5 22 586 2 555 0.0 531
MS.gene028221.t1 MTR_1g075440 45.645 574 296 5 12 580 1 563 0.0 530
MS.gene028221.t1 MTR_7g098160 46.786 560 286 5 26 580 16 568 0.0 530
MS.gene028221.t1 MTR_7g098040 47.143 560 284 5 26 580 17 569 0.0 525
MS.gene028221.t1 MTR_7g098180 45.884 571 296 5 14 578 2 565 0.0 524
MS.gene028221.t1 MTR_7g098200 45.699 558 281 5 26 578 12 552 3.10e-180 522
MS.gene028221.t1 MTR_7g098090 46.903 565 283 6 26 580 16 573 2.00e-178 518
MS.gene028221.t1 MTR_1g041815 45.455 572 298 3 12 580 1 561 7.40e-178 516
MS.gene028221.t1 MTR_3g112470 45.855 567 292 5 22 586 2 555 1.13e-177 514
MS.gene028221.t1 MTR_1g041835 45.105 572 300 3 12 580 1 561 1.79e-177 514
MS.gene028221.t1 MTR_1g042310 43.694 563 309 3 21 580 4 561 1.92e-173 504
MS.gene028221.t1 MTR_7g098220 46.032 567 291 5 19 580 9 565 1.09e-172 503
MS.gene028221.t1 MTR_5g014150 44.092 567 311 4 20 581 21 586 1.29e-172 503
MS.gene028221.t1 MTR_3g112450 45.989 561 286 6 29 585 9 556 4.96e-171 498
MS.gene028221.t1 MTR_3g072300 43.310 568 315 4 21 586 2 564 1.54e-169 494
MS.gene028221.t1 MTR_7g098230 46.617 532 272 5 52 578 35 559 2.30e-169 494
MS.gene028221.t1 MTR_4g098800 43.739 567 308 4 21 582 14 574 2.64e-167 489
MS.gene028221.t1 MTR_1g041875 43.438 541 291 3 26 563 12 540 1.08e-166 487
MS.gene028221.t1 MTR_7g010820 44.056 572 311 5 20 584 3 572 1.26e-166 487
MS.gene028221.t1 MTR_4g098800 43.739 567 308 4 21 582 79 639 1.73e-166 489
MS.gene028221.t1 MTR_5g055000 42.960 554 310 5 35 584 10 561 3.00e-166 486
MS.gene028221.t1 MTR_7g005930 43.173 542 298 4 42 581 34 567 3.03e-163 478
MS.gene028221.t1 MTR_1g116930 42.463 544 301 6 41 581 21 555 1.63e-158 466
MS.gene028221.t1 MTR_5g012290 43.885 556 305 4 33 583 17 570 1.16e-157 464
MS.gene028221.t1 MTR_1g042310 43.130 524 290 3 60 580 6 524 1.93e-157 462
MS.gene028221.t1 MTR_3g069420 42.531 569 310 9 20 583 13 569 1.08e-156 462
MS.gene028221.t1 MTR_3g005010 43.031 574 288 9 20 586 5 546 2.63e-156 459
MS.gene028221.t1 MTR_7g098220 45.627 526 274 4 60 580 3 521 2.66e-156 459
MS.gene028221.t1 MTR_1g042310 42.912 522 290 3 62 580 1 517 9.75e-156 457
MS.gene028221.t1 MTR_3g069500 42.580 566 308 7 19 583 11 560 1.59e-155 458
MS.gene028221.t1 MTR_7g088825 40.669 568 328 7 21 583 2 565 1.54e-154 457
MS.gene028221.t1 MTR_5g012270 43.440 564 304 9 33 586 19 577 4.28e-154 455
MS.gene028221.t1 MTR_7g013270 42.754 552 302 6 35 581 82 624 1.73e-153 455
MS.gene028221.t1 MTR_4g033325 42.629 563 293 8 22 580 10 546 3.80e-152 449
MS.gene028221.t1 MTR_7g088820 39.085 568 328 8 13 575 6 560 2.33e-151 448
MS.gene028221.t1 MTR_7g088790 39.821 560 330 6 29 583 15 572 2.36e-151 449
MS.gene028221.t1 MTR_1g041885 42.717 508 276 3 62 566 1 496 4.51e-151 445
MS.gene028221.t1 MTR_7g065080 40.830 578 322 8 12 586 1 561 1.80e-150 446
MS.gene028221.t1 MTR_4g101380 44.227 563 296 9 33 583 17 573 1.87e-150 446
MS.gene028221.t1 MTR_0294s0020 42.606 568 286 9 22 580 10 546 2.80e-150 444
MS.gene028221.t1 MTR_3g069440 42.729 557 310 7 29 583 19 568 7.41e-149 442
MS.gene028221.t1 MTR_4g033315 41.385 563 302 7 22 580 10 548 1.20e-148 440
MS.gene028221.t1 MTR_4g033310 41.385 563 302 7 22 580 10 548 1.20e-148 440
MS.gene028221.t1 MTR_7g098150 47.788 452 224 5 26 472 16 460 2.52e-147 434
MS.gene028221.t1 MTR_4g019580 40.422 569 325 8 20 585 14 571 3.22e-146 435
MS.gene028221.t1 MTR_4g033330 42.259 549 287 9 22 565 10 533 4.81e-143 425
MS.gene028221.t1 MTR_5g085850 41.536 573 311 5 16 583 3 556 5.54e-142 424
MS.gene028221.t1 MTR_7g006540 39.116 588 330 10 18 583 31 612 1.16e-139 420
MS.gene028221.t1 MTR_4g114340 41.373 568 320 5 21 584 2 560 3.95e-138 414
MS.gene028221.t1 MTR_8g038880 41.166 549 295 8 45 584 22 551 4.25e-138 413
MS.gene028221.t1 MTR_2g017750 39.033 579 334 10 22 583 12 588 1.32e-137 413
MS.gene028221.t1 MTR_5g038060 39.209 556 318 7 41 583 29 577 1.34e-136 410
MS.gene028221.t1 MTR_7g088820 39.839 497 292 6 84 575 4 498 1.47e-136 408
MS.gene028221.t1 MTR_4g033395 42.043 509 258 10 29 528 18 498 1.17e-134 402
MS.gene028221.t1 MTR_4g033375 41.386 505 267 7 29 528 18 498 7.20e-134 400
MS.gene028221.t1 MTR_3g014790 39.646 565 311 8 29 584 5 548 8.02e-133 399
MS.gene028221.t1 MTR_7g098200 42.637 455 249 3 129 578 1 448 2.80e-132 395
MS.gene028221.t1 MTR_4g107670 37.500 584 334 9 21 585 2 573 4.05e-132 398
MS.gene028221.t1 MTR_8g087780 39.613 568 330 7 29 583 7 574 9.07e-131 395
MS.gene028221.t1 MTR_4g107580 37.004 554 334 6 42 583 23 573 2.21e-130 394
MS.gene028221.t1 MTR_8g469480 37.636 550 323 8 47 583 42 584 1.21e-129 393
MS.gene028221.t1 MTR_3g100980 37.004 554 329 5 37 583 10 550 4.11e-128 387
MS.gene028221.t1 MTR_4g107510 34.465 589 366 6 5 584 8 585 6.57e-128 388
MS.gene028221.t1 MTR_5g038380 36.788 579 350 7 16 583 1 574 2.49e-125 381
MS.gene028221.t1 MTR_8g469470 34.708 582 357 6 17 586 14 584 3.50e-124 378
MS.gene028221.t1 MTR_2g005130 38.600 557 315 8 29 580 26 560 1.79e-123 376
MS.gene028221.t1 MTR_4g107530 35.849 583 346 9 18 584 12 582 4.76e-123 376
MS.gene028221.t1 MTR_8g469310 36.268 568 339 5 30 583 13 571 1.38e-122 374
MS.gene028221.t1 MTR_3g100980 35.223 582 329 6 37 583 10 578 5.10e-122 373
MS.gene028221.t1 MTR_8g103233 38.504 548 322 8 40 580 14 553 5.64e-122 372
MS.gene028221.t1 MTR_7g088820 38.938 452 269 6 129 575 1 450 5.77e-121 366
MS.gene028221.t1 MTR_7g065080 39.673 489 276 7 101 586 2 474 6.49e-121 367
MS.gene028221.t1 MTR_5g038190 35.938 576 340 9 20 583 10 568 4.10e-120 367
MS.gene028221.t1 MTR_4g033325 41.794 457 236 8 128 580 18 448 4.63e-120 363
MS.gene028221.t1 MTR_8g087810 39.199 574 325 10 29 583 7 575 3.44e-119 365
MS.gene028221.t1 MTR_4g033325 41.995 431 229 6 154 580 9 422 1.82e-116 353
MS.gene028221.t1 MTR_4g033385 40.909 462 236 10 128 580 16 449 4.23e-116 353
MS.gene028221.t1 MTR_7g111260 34.432 546 339 7 41 583 17 546 2.67e-114 352
MS.gene028221.t1 MTR_1g085090 34.046 561 349 9 28 583 2 546 5.69e-114 352
MS.gene028221.t1 MTR_2g101650 35.883 549 336 7 41 580 22 563 8.75e-114 351
MS.gene028221.t1 MTR_4g024930 36.602 571 325 10 19 581 12 553 5.14e-113 348
MS.gene028221.t1 MTR_1g009200 36.881 545 326 7 45 580 29 564 1.38e-112 348
MS.gene028221.t1 MTR_1g026750 35.155 549 339 5 40 580 15 554 2.02e-111 345
MS.gene028221.t1 MTR_1g026740 35.556 540 339 4 45 580 19 553 3.89e-111 344
MS.gene028221.t1 MTR_4g123537 36.151 556 336 7 33 584 31 571 5.74e-111 345
MS.gene028221.t1 MTR_2g101590 36.000 550 334 9 41 580 24 565 5.49e-109 340
MS.gene028221.t1 MTR_2g101610 36.182 550 333 9 41 580 25 566 3.04e-108 338
MS.gene028221.t1 MTR_2g101640 34.974 569 354 9 20 580 2 562 4.92e-107 335
MS.gene028221.t1 MTR_4g011280 35.624 553 328 14 42 580 31 569 2.26e-105 330
MS.gene028221.t1 MTR_4g107610 34.918 547 341 8 42 580 30 569 2.89e-105 330
MS.gene028221.t1 MTR_7g064780 31.874 571 377 7 18 580 1 567 7.39e-103 323
MS.gene028221.t1 MTR_1g026770 34.120 551 341 8 45 585 17 555 8.23e-102 320
MS.gene028221.t1 MTR_1g057460 34.875 562 332 15 26 580 30 564 1.02e-101 320
MS.gene028221.t1 MTR_2g101560 34.358 553 339 10 41 580 25 566 1.49e-100 318
MS.gene028221.t1 MTR_7g098210 35.755 523 244 9 62 578 1 437 1.56e-100 312
MS.gene028221.t1 MTR_6g008690 32.857 560 323 10 48 586 12 539 1.27e-95 303
MS.gene028221.t1 MTR_1g057460 35.433 508 299 12 78 580 10 493 3.28e-95 300
MS.gene028221.t1 MTR_7g064800 33.029 548 353 8 41 578 24 567 1.05e-92 296
MS.gene028221.t1 MTR_0236s0050 35.433 508 299 12 78 580 10 493 6.31e-89 284
MS.gene028221.t1 MTR_2g093640 30.545 550 342 9 45 581 23 545 5.71e-81 265
MS.gene028221.t1 MTR_2g093160 32.110 545 340 9 45 581 23 545 2.90e-78 258
MS.gene028221.t1 MTR_2g093180 31.743 545 343 9 45 581 23 546 1.63e-77 255
MS.gene028221.t1 MTR_7g051880 31.047 554 341 8 29 580 11 525 5.49e-77 253
MS.gene028221.t1 MTR_4g033310 40.690 290 163 3 293 580 202 484 1.88e-75 248
MS.gene028221.t1 MTR_4g033310 47.619 189 90 2 22 210 10 189 1.10e-45 168
MS.gene028221.t1 MTR_7g051830 30.144 554 346 7 29 580 11 525 4.02e-74 246
MS.gene028221.t1 MTR_7g052600 30.018 563 353 8 20 580 2 525 4.85e-74 246
MS.gene028221.t1 MTR_1g009170 33.002 403 208 11 168 562 9 357 5.67e-59 202
MS.gene028221.t1 MTR_3g065350 37.423 163 96 2 352 514 1 157 2.22e-30 117
MS.gene028221.t1 MTR_4g033390 42.169 83 48 0 498 580 30 112 1.93e-19 85.1
MS.gene028221.t1 MTR_8g091265 37.069 116 69 4 313 424 3 118 1.75e-12 65.5
MS.gene028221.t1 MTR_4g124330 33.058 121 58 2 145 265 8 105 5.78e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028221.t1 AT2G02040 76.962 586 133 1 1 586 1 584 0.0 961
MS.gene028221.t1 AT1G62200 64.094 596 195 4 1 585 2 589 0.0 806
MS.gene028221.t1 AT1G62200 61.280 625 194 5 1 585 16 632 0.0 791
MS.gene028221.t1 AT1G62200 61.280 625 194 5 1 585 2 618 0.0 791
MS.gene028221.t1 AT3G54140 61.837 566 213 3 21 585 2 565 0.0 746
MS.gene028221.t1 AT3G54140 61.837 566 213 3 21 585 2 565 0.0 746
MS.gene028221.t1 AT2G02020 61.670 587 181 7 1 585 1 545 0.0 736
MS.gene028221.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene028221.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene028221.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene028221.t1 AT2G02020 58.262 587 180 8 1 585 1 524 0.0 675
MS.gene028221.t1 AT5G46050 45.173 549 288 5 20 563 4 544 2.83e-168 491
MS.gene028221.t1 AT1G32450 42.857 574 315 8 18 581 12 582 5.29e-168 491
MS.gene028221.t1 AT1G68570 45.167 569 305 6 20 583 2 568 5.43e-165 483
MS.gene028221.t1 AT2G40460 42.301 565 313 4 21 583 2 555 2.34e-162 476
MS.gene028221.t1 AT4G21680 43.234 569 308 7 27 585 12 575 2.51e-161 473
MS.gene028221.t1 AT1G68570 46.255 534 282 5 55 583 5 538 5.02e-160 469
MS.gene028221.t1 AT5G46040 42.355 569 315 5 20 583 4 564 5.03e-159 468
MS.gene028221.t1 AT5G19640 42.123 584 313 8 5 581 17 582 6.82e-158 465
MS.gene028221.t1 AT2G26690 43.234 569 307 7 21 584 2 559 2.56e-154 455
MS.gene028221.t1 AT3G53960 41.446 567 321 6 20 583 15 573 5.60e-148 440
MS.gene028221.t1 AT1G12110 42.115 558 313 4 33 584 17 570 2.55e-147 437
MS.gene028221.t1 AT2G37900 39.062 576 335 5 15 586 8 571 1.84e-145 432
MS.gene028221.t1 AT2G26690 43.364 535 287 7 55 584 3 526 1.89e-144 429
MS.gene028221.t1 AT1G22540 41.355 561 297 7 31 584 18 553 2.28e-143 426
MS.gene028221.t1 AT3G54450 38.406 552 314 8 41 584 10 543 2.11e-142 424
MS.gene028221.t1 AT2G26690 43.321 524 281 7 66 584 2 514 7.47e-141 419
MS.gene028221.t1 AT1G72140 39.792 578 301 8 13 580 9 549 8.62e-139 415
MS.gene028221.t1 AT5G13400 39.616 573 325 7 26 583 45 611 1.89e-136 411
MS.gene028221.t1 AT1G22570 40.395 557 300 9 13 561 6 538 1.23e-132 399
MS.gene028221.t1 AT1G69870 38.225 552 328 7 40 583 48 594 7.11e-132 399
MS.gene028221.t1 AT1G59740 38.103 580 339 9 1 573 1 567 1.73e-131 397
MS.gene028221.t1 AT1G22550 38.038 581 325 7 13 584 6 560 5.88e-130 392
MS.gene028221.t1 AT1G69850 37.564 583 341 6 18 583 3 579 1.52e-129 392
MS.gene028221.t1 AT3G16180 38.919 555 323 8 37 580 16 565 1.01e-128 390
MS.gene028221.t1 AT1G27040 37.770 556 334 3 29 581 13 559 1.23e-127 386
MS.gene028221.t1 AT1G27040 37.770 556 334 3 29 581 9 555 1.33e-127 386
MS.gene028221.t1 AT5G46050 44.545 440 231 5 129 563 1 432 1.11e-126 380
MS.gene028221.t1 AT3G21670 39.223 566 314 7 29 583 12 558 2.47e-126 384
MS.gene028221.t1 AT1G72130 38.779 557 290 10 40 586 21 536 5.50e-126 381
MS.gene028221.t1 AT1G72125 40.214 562 307 11 31 584 17 557 6.75e-126 382
MS.gene028221.t1 AT2G37900 38.569 503 295 4 86 586 2 492 2.19e-125 378
MS.gene028221.t1 AT1G22570 40.698 516 280 7 54 561 4 501 3.99e-124 376
MS.gene028221.t1 AT1G52190 36.347 553 334 7 41 580 19 566 2.03e-123 377
MS.gene028221.t1 AT1G27040 38.447 528 313 3 57 581 9 527 9.16e-123 373
MS.gene028221.t1 AT1G33440 37.435 577 332 9 6 573 4 560 1.05e-121 372
MS.gene028221.t1 AT1G72120 38.721 563 310 10 31 584 17 553 4.63e-120 367
MS.gene028221.t1 AT1G18880 35.385 585 338 12 14 583 7 566 1.39e-119 366
MS.gene028221.t1 AT1G27080 35.702 563 335 10 35 586 5 551 4.09e-111 344
MS.gene028221.t1 AT5G62730 33.625 571 348 7 20 580 33 582 7.36e-109 338
MS.gene028221.t1 AT5G62680 33.893 596 371 11 6 583 2 592 1.32e-108 339
MS.gene028221.t1 AT5G14940 33.868 561 329 10 41 583 5 541 1.85e-104 326
MS.gene028221.t1 AT5G28470 31.579 551 362 7 37 580 11 553 1.76e-103 324
MS.gene028221.t1 AT3G47960 34.672 548 343 9 47 583 65 608 1.84e-103 326
MS.gene028221.t1 AT5G62730 33.579 542 329 7 49 580 3 523 6.26e-102 319
MS.gene028221.t1 AT5G28470 31.397 551 361 8 37 580 11 551 1.53e-100 316
MS.gene028221.t1 AT1G27080 35.564 523 311 9 74 586 3 509 9.05e-100 313
MS.gene028221.t1 AT1G69860 34.159 565 348 8 28 586 6 552 6.56e-99 311
MS.gene028221.t1 AT1G72130 38.584 438 227 8 158 586 14 418 3.92e-98 305
MS.gene028221.t1 AT1G72130 38.584 438 227 8 158 586 14 418 3.92e-98 305
MS.gene028221.t1 AT3G01350 31.095 566 347 10 40 581 3 549 1.55e-90 290
MS.gene028221.t1 AT3G25260 32.182 550 326 13 33 580 11 515 1.74e-88 283
MS.gene028221.t1 AT3G45650 29.893 562 367 8 27 584 6 544 1.62e-86 280
MS.gene028221.t1 AT3G45680 30.298 571 360 12 23 584 2 543 8.78e-86 278
MS.gene028221.t1 AT3G45660 30.783 549 349 10 42 584 20 543 6.50e-83 270
MS.gene028221.t1 AT3G45660 30.783 549 349 10 42 584 20 543 6.50e-83 270
MS.gene028221.t1 AT3G45660 30.783 549 349 10 42 584 41 564 1.09e-82 270
MS.gene028221.t1 AT3G45650 28.741 588 366 9 27 584 6 570 1.72e-81 267
MS.gene028221.t1 AT3G25280 30.741 553 336 10 33 580 11 521 7.14e-81 263
MS.gene028221.t1 AT3G45710 28.261 552 361 11 42 584 20 545 6.89e-77 254
MS.gene028221.t1 AT3G45720 29.390 541 349 11 51 584 27 541 7.39e-77 254
MS.gene028221.t1 AT3G45700 27.717 552 351 11 45 584 18 533 4.13e-72 241
MS.gene028221.t1 AT3G45690 27.022 544 328 12 45 582 20 500 6.03e-63 216
MS.gene028221.t1 AT2G38100 28.407 521 324 13 71 580 2 484 6.13e-48 175
MS.gene028221.t1 AT2G38100 28.407 521 324 13 71 580 18 500 1.94e-47 174
MS.gene028221.t1 AT2G38100 28.407 521 324 13 71 580 24 506 2.77e-47 174
MS.gene028221.t1 AT5G11570 38.462 260 148 5 325 582 229 478 1.31e-43 162
MS.gene028221.t1 AT5G11570 30.547 311 196 9 29 331 2 300 1.51e-34 137

Find 146 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCATGTGTGTCCTCTTT+TGG 0.164173 4.2:-16510514 MS.gene028221:CDS
TGGCATTCCTGCTTTATTTA+TGG 0.166418 4.2:-16510341 MS.gene028221:CDS
GATGGTTCGGTTGACTTTAA+AGG 0.204057 4.2:-16511677 MS.gene028221:CDS
AATCCCTCAGTATTTCTTAT+TGG 0.209801 4.2:-16508514 MS.gene028221:CDS
GGCATTCCTGCTTTATTTAT+GGG 0.249270 4.2:-16510340 MS.gene028221:CDS
GGAAGAAGCTCTTGTTGTTC+AGG 0.262904 4.2:-16512855 MS.gene028221:intron
GAAGTAAATCATGGAGAAAA+TGG 0.277360 4.2:+16511178 None:intergenic
ATCCCTCAGTATTTCTTATT+GGG 0.278225 4.2:-16508513 MS.gene028221:CDS
CAGTTCTAGCAGATTCTTAC+TGG 0.283591 4.2:-16511220 MS.gene028221:CDS
TGCACAAGATTGAAATAAAA+AGG 0.285120 4.2:+16508637 None:intergenic
CAAGGCTTGCCTAGGATAAA+TGG 0.286659 4.2:+16511611 None:intergenic
CCAATTGCAAGGAAATTTAC+TGG 0.288958 4.2:-16508702 MS.gene028221:CDS
GCAGGCTGGGGTCTTGGATT+TGG 0.311710 4.2:-16510361 MS.gene028221:CDS
CCAGTAAATTTCCTTGCAAT+TGG 0.315468 4.2:+16508702 None:intergenic
GATCCGCATGTTTCCAGTTT+GGG 0.318958 4.2:-16508898 MS.gene028221:CDS
CATGTCAGCAGCTGCTGTTT+TGG 0.319086 4.2:-16508616 MS.gene028221:CDS
ATTGAAGCCTGCTGAGTGTT+TGG 0.320390 4.2:-16510623 MS.gene028221:CDS
ATCCCTTCTTAACCCTTTCC+CGG 0.335365 4.2:+16510464 None:intergenic
GAAAATGCAGGCTGGGGTCT+TGG 0.340594 4.2:-16510367 MS.gene028221:CDS
ATGTTTCCAGTTTGGGCTAC+TGG 0.352423 4.2:-16508891 MS.gene028221:CDS
CATAAACTTCGCATGGCATC+TGG 0.353544 4.2:+16508435 None:intergenic
TGATCCGCATGTTTCCAGTT+TGG 0.354435 4.2:-16508899 MS.gene028221:CDS
CTGCAGATTGCGAACGAGCT+TGG 0.360051 4.2:-16508582 MS.gene028221:CDS
GGGAAATCCTGGATGGATTC+CGG 0.364084 4.2:-16508325 MS.gene028221:CDS
CTGTACCCCTTACTATACTA+TGG 0.366054 4.2:-16508539 MS.gene028221:CDS
TGCAGATTGCGAACGAGCTT+GGG 0.368793 4.2:-16508581 MS.gene028221:CDS
GTCTCTACCTGATTGCGCTT+GGG 0.374585 4.2:-16510549 MS.gene028221:CDS
GTGGTGACTATTCTAACCTT+TGG 0.376077 4.2:-16508962 MS.gene028221:CDS
ATTCTTACTGGGGACGATAC+TGG 0.377598 4.2:-16511208 MS.gene028221:CDS
GTCACTTCTGACTACTTCAC+TGG 0.378429 4.2:-16508403 MS.gene028221:CDS
ATGGTTCGGTTGACTTTAAA+GGG 0.390066 4.2:-16511676 MS.gene028221:CDS
TTGAAGCCTGCTGAGTGTTT+GGG 0.391323 4.2:-16510622 MS.gene028221:CDS
TGTTACCTTGCACCTCTCAT+TGG 0.393805 4.2:-16511245 MS.gene028221:CDS
CCACAAACAATGTTGACATC+TGG 0.401887 4.2:+16508844 None:intergenic
ACCTGGCACATTCTTGTAAG+AGG 0.405587 4.2:+16510253 None:intergenic
TACCTGATTGCGCTTGGGAC+TGG 0.412113 4.2:-16510544 MS.gene028221:CDS
CATAGTATAGTAAGGGGTAC+AGG 0.421123 4.2:+16508540 None:intergenic
ATGTAGCTTGCGAGTAAGAT+AGG 0.425650 4.2:+16511316 None:intergenic
CACTCAGCAGGCTTCAATGC+TGG 0.427383 4.2:+16510628 None:intergenic
GGTCTCTACCTGATTGCGCT+TGG 0.427510 4.2:-16510550 MS.gene028221:CDS
GGAAGATTCATCGCGTACTT+TGG 0.427942 4.2:-16512876 MS.gene028221:CDS
CAATAAAACTGCTTGATACA+AGG 0.433027 4.2:+16510401 None:intergenic
GCATATTGTGCAGGAGTAGC+TGG 0.436853 4.2:+16510586 None:intergenic
CGGCAAGACACGTCACTACT+TGG 0.445268 4.2:-16511277 MS.gene028221:CDS
GAAATTTACTGGCAAAGAAA+GGG 0.445439 4.2:-16508691 MS.gene028221:CDS
TACAAGAATGTGCCAGGTTG+TGG 0.446111 4.2:-16510248 MS.gene028221:CDS
GGAAATTTACTGGCAAAGAA+AGG 0.446969 4.2:-16508692 MS.gene028221:CDS
TGTTGTCTCGTGCAGGGAAT+GGG 0.447601 4.2:-16510676 MS.gene028221:intron
CACCAGTCCCAAGCGCAATC+AGG 0.449732 4.2:+16510542 None:intergenic
TGACCTCCGTTCAAATTATC+CGG 0.449853 4.2:+16508306 None:intergenic
CCCGTGCTTAAGCAGAATAC+TGG 0.455033 4.2:-16511650 MS.gene028221:CDS
ATAATGCCAGTAGCCCAAAC+TGG 0.457072 4.2:+16508885 None:intergenic
TCTGGGTCCCTGTCTATGAC+AGG 0.460821 4.2:-16508734 MS.gene028221:CDS
CAATGAGTGCTGTGAACGTT+TGG 0.463697 4.2:-16511369 MS.gene028221:CDS
GGATTTGCCATAGTATAGTA+AGG 0.466110 4.2:+16508532 None:intergenic
CCAGATGTCAACATTGTTTG+TGG 0.471109 4.2:-16508844 MS.gene028221:CDS
GACAAGAGCTCTGCAATTGA+AGG 0.471271 4.2:-16510160 MS.gene028221:CDS
TTCGCATGGCATCTGGAGAT+TGG 0.473235 4.2:+16508442 None:intergenic
GCTTTACACAGGAGATGGTT+CGG 0.480382 4.2:-16511690 MS.gene028221:CDS
ACTATAAACCTGTCATAGAC+AGG 0.482414 4.2:+16508726 None:intergenic
CCCTCTTACAAGAATGTGCC+AGG 0.485020 4.2:-16510254 MS.gene028221:CDS
GAGTTGCAAAGAATGGGAAT+TGG 0.489618 4.2:-16508660 MS.gene028221:CDS
TTAAGCAGAATACTGGCAAC+TGG 0.494822 4.2:-16511643 MS.gene028221:CDS
TCAAAAGTTGAGAGGGAAGC+TGG 0.497139 4.2:+16508774 None:intergenic
GCAGAAGTATTCACATTCGT+GGG 0.498185 4.2:-16508486 MS.gene028221:CDS
CACAAACAATGTTGACATCT+GGG 0.498393 4.2:+16508845 None:intergenic
TACAAGAGACTACTATCCTC+AGG 0.499157 4.2:+16510193 None:intergenic
TGCGAACGAGCTTGGGCTTG+TGG 0.501123 4.2:-16508574 MS.gene028221:CDS
AATTACAATGAAGTAAATCA+TGG 0.505743 4.2:+16511169 None:intergenic
AAAGCTTGTCCATTTATCCT+AGG 0.506011 4.2:-16511620 MS.gene028221:intron
GATTCAAGAAAATGCAGGCT+GGG 0.507809 4.2:-16510374 MS.gene028221:CDS
TCCCCGGGAAAGGGTTAAGA+AGG 0.509878 4.2:-16510467 MS.gene028221:CDS
TGATACTGATCCCCGGGAAA+GGG 0.512180 4.2:-16510476 MS.gene028221:CDS
AAACTGATCTGCCCCAAAAG+AGG 0.516439 4.2:+16510501 None:intergenic
AGCAGAAGTATTCACATTCG+TGG 0.516878 4.2:-16508487 MS.gene028221:CDS
TCCCTTCTTAACCCTTTCCC+GGG 0.517322 4.2:+16510465 None:intergenic
ATGATACTGATCCCCGGGAA+AGG 0.520176 4.2:-16510477 MS.gene028221:CDS
AAATTATCCGGAATCCATCC+AGG 0.520818 4.2:+16508318 None:intergenic
GCCAGTATTCTGCTTAAGCA+CGG 0.524420 4.2:+16511649 None:intergenic
ATAGTAAGGGGTACAGGGAT+AGG 0.525408 4.2:+16508546 None:intergenic
AGTAAGCTTTACACAGGAGA+TGG 0.528514 4.2:-16511695 MS.gene028221:CDS
CCAGTATTCTGCTTAAGCAC+GGG 0.535944 4.2:+16511650 None:intergenic
TCAACATTGTTTGTGGAACA+AGG 0.537468 4.2:-16508837 MS.gene028221:CDS
GAGACTTTGCACTGTGACAC+AGG 0.538657 4.2:-16508940 MS.gene028221:CDS
GGATTCAAGAAAATGCAGGC+TGG 0.539579 4.2:-16510375 MS.gene028221:CDS
GCTAATCCCATAAATAAAGC+AGG 0.540709 4.2:+16510334 None:intergenic
GGTTTATAGTTCCAATTGCA+AGG 0.543519 4.2:-16508713 MS.gene028221:CDS
TAGTAGTCTCTTGTACGAAA+CGG 0.552468 4.2:-16510185 MS.gene028221:CDS
AGTTCTAGCAGATTCTTACT+GGG 0.559492 4.2:-16511219 MS.gene028221:CDS
GCAGCACCCAAACACTCAGC+AGG 0.559886 4.2:+16510616 None:intergenic
AATAAAACTGCTTGATACAA+GGG 0.562387 4.2:+16510402 None:intergenic
TTGCACTGTGACACAGGTGG+AGG 0.563549 4.2:-16508934 MS.gene028221:CDS
CTGATTGCGCTTGGGACTGG+TGG 0.569652 4.2:-16510541 MS.gene028221:CDS
GTTTGATGATACTGATCCCC+GGG 0.576524 4.2:-16510482 MS.gene028221:CDS
CTTACTCGCAAGCTACATGA+AGG 0.577120 4.2:-16511311 MS.gene028221:CDS
TCACTTCTGACTACTTCACT+GGG 0.577467 4.2:-16508402 MS.gene028221:CDS
CCTGGCACATTCTTGTAAGA+GGG 0.578165 4.2:+16510254 None:intergenic
GAAAAGATGCAGCCACAACC+TGG 0.578643 4.2:+16510236 None:intergenic
TTATTTATGGGATTAGCCAT+CGG 0.583415 4.2:-16510328 MS.gene028221:CDS
AAATTTACTGGCAAAGAAAG+GGG 0.587108 4.2:-16508690 MS.gene028221:CDS
AGTTTGATGATACTGATCCC+CGG 0.590421 4.2:-16510483 MS.gene028221:CDS
TCTGATGCTGAGAGGAAAAG+TGG 0.591094 4.2:-16508981 MS.gene028221:CDS
ACGCGATGAATCTTCCTCTA+CGG 0.600209 4.2:+16512883 None:intergenic
TGTGAACGTTTGGCATACTA+CGG 0.601727 4.2:-16511359 MS.gene028221:CDS
GAAGAGAGTAAGCTTTACAC+AGG 0.604640 4.2:-16511701 MS.gene028221:CDS
TGGATTCCGGATAATTTGAA+CGG 0.605347 4.2:-16508312 MS.gene028221:CDS
GCTCTGCAATTGAAGGAAGT+CGG 0.605687 4.2:-16510153 MS.gene028221:CDS
AATTACATCAAAAGTTGAGA+GGG 0.606804 4.2:+16508767 None:intergenic
ATAGTATAGTAAGGGGTACA+GGG 0.609729 4.2:+16508541 None:intergenic
GATTTGCCATAGTATAGTAA+GGG 0.612787 4.2:+16508533 None:intergenic
ACTATGATGAACACTAGTAT+CGG 0.613753 4.2:-16508813 MS.gene028221:CDS
AGCACTGCATAAACTTCGCA+TGG 0.615419 4.2:+16508428 None:intergenic
GTGTGGATTCAAGAAAATGC+AGG 0.620641 4.2:-16510379 MS.gene028221:CDS
CCCTTCTTAACCCTTTCCCG+GGG 0.625514 4.2:+16510466 None:intergenic
AGACACGTCACTACTTGGCA+AGG 0.625847 4.2:-16511272 MS.gene028221:CDS
TAATTACATCAAAAGTTGAG+AGG 0.625894 4.2:+16508766 None:intergenic
GGAGAAAATGGGTTCCGTAG+AGG 0.626118 4.2:-16512897 None:intergenic
ATTCAAGAAAATGCAGGCTG+GGG 0.627196 4.2:-16510373 MS.gene028221:CDS
GCTAGAACTGCTCCAATGAG+AGG 0.630490 4.2:+16511233 None:intergenic
AAAGTTGAGAGGGAAGCTGG+TGG 0.638855 4.2:+16508777 None:intergenic
ACAAGAGACTACTATCCTCA+GGG 0.646212 4.2:+16510194 None:intergenic
AACTTACTTCTCTACACGAG+GGG 0.646338 4.2:-16508346 MS.gene028221:CDS
GTAACTTACTTCTCTACACG+AGG 0.646598 4.2:-16508348 MS.gene028221:CDS
CTATAAACCTGTCATAGACA+GGG 0.648079 4.2:+16508727 None:intergenic
TCACAGTGCAAAGTCTCCAA+AGG 0.648321 4.2:+16508946 None:intergenic
AAGTTGAGAGGGAAGCTGGT+GGG 0.649456 4.2:+16508778 None:intergenic
CTGTAGTCTCTGATGCTGAG+AGG 0.653969 4.2:-16508989 MS.gene028221:CDS
CTGCTCCAATGAGAGGTGCA+AGG 0.655982 4.2:+16511240 None:intergenic
CTCCCAATAAGAAATACTGA+GGG 0.657516 4.2:+16508511 None:intergenic
ATTTGCCATAGTATAGTAAG+GGG 0.658896 4.2:+16508534 None:intergenic
CCCCGGGAAAGGGTTAAGAA+GGG 0.661735 4.2:-16510466 MS.gene028221:CDS
TATTGTGCAGGAGTAGCTGG+AGG 0.663423 4.2:+16510589 None:intergenic
GTTCTAGCAGATTCTTACTG+GGG 0.673438 4.2:-16511218 MS.gene028221:CDS
ACTTTGCACTGTGACACAGG+TGG 0.676355 4.2:-16508937 MS.gene028221:CDS
GAGTTCTTTCATTCTCACTG+TGG 0.679581 4.2:-16508370 MS.gene028221:CDS
GCTCCCAATAAGAAATACTG+AGG 0.683176 4.2:+16508510 None:intergenic
ATTGTGCAGGAGTAGCTGGA+GGG 0.683715 4.2:+16510590 None:intergenic
ATTCCGGATAATTTGAACGG+AGG 0.687101 4.2:-16508309 MS.gene028221:CDS
GCCCCAAAAGAGGACACACA+TGG 0.688333 4.2:+16510511 None:intergenic
CAGAAGTATTCACATTCGTG+GGG 0.688336 4.2:-16508485 MS.gene028221:CDS
TAGCCCAAACTGGAAACATG+CGG 0.695289 4.2:+16508895 None:intergenic
TAACTTACTTCTCTACACGA+GGG 0.696917 4.2:-16508347 MS.gene028221:CDS
GCGGAATCTGGATGTCCCTG+AGG 0.708173 4.2:-16510209 MS.gene028221:CDS
TAGAGCATAGTGATGAACTG+AGG 0.711499 4.2:-16510126 MS.gene028221:intron
ACTTACTTCTCTACACGAGG+GGG 0.713796 4.2:-16508345 MS.gene028221:CDS
ACATGAAGGAAATGTCTCTG+CGG 0.738709 4.2:-16511297 MS.gene028221:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATTAACTTATATAAC+TGG - chr4.2:16508430-16508449 MS.gene028221:CDS 10.0%
!! ATAATAATAAGTATAGTAAT+TGG + chr4.2:16508371-16508390 None:intergenic 10.0%
!! TTACTATACTTATTATTATT+AGG - chr4.2:16508372-16508391 MS.gene028221:CDS 10.0%
!!! TAATTTTATTAATTGAACAA+TGG + chr4.2:16508419-16508438 None:intergenic 10.0%
!! ATAAATAACAAATCAATAGA+GGG + chr4.2:16508311-16508330 None:intergenic 15.0%
!! ATAACCTAATAATAATTGTA+TGG + chr4.2:16508912-16508931 None:intergenic 15.0%
!! ATATAAAGAAGATTTAGAAA+TGG + chr4.2:16510085-16510104 None:intergenic 15.0%
!! ATTTCCATACAATTATTATT+AGG - chr4.2:16508905-16508924 MS.gene028221:CDS 15.0%
!! ATTTCTAAATCTTCTTTATA+TGG - chr4.2:16510084-16510103 MS.gene028221:intron 15.0%
!! GTTATAAGAAACAAATATTA+TGG - chr4.2:16510136-16510155 MS.gene028221:CDS 15.0%
!! TAACAACACAAATTATTATT+AGG + chr4.2:16511982-16512001 None:intergenic 15.0%
!! TACTTATTATTATTAGGATT+AGG - chr4.2:16508378-16508397 MS.gene028221:CDS 15.0%
!! TTTCTAAATCTTCTTTATAT+GGG - chr4.2:16510085-16510104 MS.gene028221:intron 15.0%
!!! AATGTTTTTATTACTATTTG+GGG - chr4.2:16509095-16509114 MS.gene028221:intron 15.0%
!!! ACAACATTAAATTTAAAGTA+AGG + chr4.2:16511005-16511024 None:intergenic 15.0%
!!! CAACATTAAATTTAAAGTAA+GGG + chr4.2:16511004-16511023 None:intergenic 15.0%
!!! CAATGTTTTTATTACTATTT+GGG - chr4.2:16509094-16509113 MS.gene028221:intron 15.0%
!!! TCAATGTTTTTATTACTATT+TGG - chr4.2:16509093-16509112 MS.gene028221:intron 15.0%
!! AAAGTTATAGGGTTAATATT+AGG - chr4.2:16510274-16510293 MS.gene028221:CDS 20.0%
!! AAATCAATAAACTACGAATT+TGG + chr4.2:16511130-16511149 None:intergenic 20.0%
!! AATTACAATGAAGTAAATCA+TGG + chr4.2:16509930-16509949 None:intergenic 20.0%
!! ATAGGAGAATAAAAATATCT+TGG + chr4.2:16509958-16509977 None:intergenic 20.0%
!! ATGAATTTGAGTATTATAGT+CGG + chr4.2:16510242-16510261 None:intergenic 20.0%
!! ATTTGACATTTAACTATCAA+GGG + chr4.2:16509262-16509281 None:intergenic 20.0%
!! GATAAATAACAAATCAATAG+AGG + chr4.2:16508312-16508331 None:intergenic 20.0%
!! GTCAAAAAAAAAATCAAAGA+TGG + chr4.2:16511293-16511312 None:intergenic 20.0%
!! TAAATAATCAAACACACAAA+TGG - chr4.2:16508519-16508538 MS.gene028221:CDS 20.0%
!! TATTGAATGAACTTAAAATG+TGG - chr4.2:16509629-16509648 MS.gene028221:intron 20.0%
!! TATTTGACATTTAACTATCA+AGG + chr4.2:16509263-16509282 None:intergenic 20.0%
!! TTATTATTAGGATTAGGATT+AGG - chr4.2:16508384-16508403 MS.gene028221:CDS 20.0%
!! TTCTAAATCTTCTTTATATG+GGG - chr4.2:16510086-16510105 MS.gene028221:intron 20.0%
!! TTTCACATAAAATGCAAATA+CGG + chr4.2:16511510-16511529 None:intergenic 20.0%
!!! AAACAAAGCTTTATTTACTT+CGG - chr4.2:16511737-16511756 MS.gene028221:intron 20.0%
!!! AATTTTTTAGCATTAGAGTA+GGG + chr4.2:16511178-16511197 None:intergenic 20.0%
!!! ATTTGTGTTGTTATCAATAA+AGG - chr4.2:16511989-16512008 MS.gene028221:intron 20.0%
!!! GTGTAGAGAATTTTATAAAT+AGG + chr4.2:16509976-16509995 None:intergenic 20.0%
!!! TATTAGAAATTTTTTACCAG+AGG + chr4.2:16511947-16511966 None:intergenic 20.0%
!!! TTTTACTTTTCTATCAACAT+AGG - chr4.2:16510669-16510688 MS.gene028221:intron 20.0%
!!! TTTTGAGATCTATGATTTAT+TGG - chr4.2:16511443-16511462 MS.gene028221:intron 20.0%
!!! TTTTTGCTTATAATAATGAC+TGG + chr4.2:16509544-16509563 None:intergenic 20.0%
! AATAAAACTGCTTGATACAA+GGG + chr4.2:16510697-16510716 None:intergenic 25.0%
! AATAACCAATAGTTCATCAT+AGG + chr4.2:16509360-16509379 None:intergenic 25.0%
! AATTACATCAAAAGTTGAGA+GGG + chr4.2:16512332-16512351 None:intergenic 25.0%
! AATTGGAAGTTGTATATGTA+AGG - chr4.2:16511194-16511213 MS.gene028221:CDS 25.0%
! ACAATAACATTCCTTGAAAA+CGG + chr4.2:16511852-16511871 None:intergenic 25.0%
! ATAACCAATAGTTCATCATA+GGG + chr4.2:16509359-16509378 None:intergenic 25.0%
! ATTGGAAGTTGTATATGTAA+GGG - chr4.2:16511195-16511214 MS.gene028221:CDS 25.0%
! CAAAAGATACAAGAAAAAGA+AGG - chr4.2:16512882-16512901 MS.gene028221:CDS 25.0%
! CATCACAAATTACATTATGT+AGG + chr4.2:16510043-16510062 None:intergenic 25.0%
! CTACTCTAATGCTAAAAAAT+TGG - chr4.2:16511177-16511196 MS.gene028221:CDS 25.0%
! TAAGTAAAGTGACTATGATT+AGG + chr4.2:16508951-16508970 None:intergenic 25.0%
! TAATTACATCAAAAGTTGAG+AGG + chr4.2:16512333-16512352 None:intergenic 25.0%
! TAGAATATCATAACCAGATA+TGG - chr4.2:16509145-16509164 MS.gene028221:intron 25.0%
! TATTGAATGAACCTAAAATG+TGG + chr4.2:16509568-16509587 None:intergenic 25.0%
! TGCACAAGATTGAAATAAAA+AGG + chr4.2:16512462-16512481 None:intergenic 25.0%
! TTATGATCAAGAGTTGAATA+AGG + chr4.2:16508487-16508506 None:intergenic 25.0%
!! AAAAGTAGAAGGTATAGTAT+TGG + chr4.2:16508871-16508890 None:intergenic 25.0%
!! ATGTAATTTGTGATGGTAAT+AGG - chr4.2:16510048-16510067 MS.gene028221:intron 25.0%
!! CATGTAAACAATTTTCTCTT+TGG - chr4.2:16511898-16511917 MS.gene028221:intron 25.0%
!! CTACATAATGTAATTTGTGA+TGG - chr4.2:16510041-16510060 MS.gene028221:intron 25.0%
!! CTTCTTTTTCTTGTATCTTT+TGG + chr4.2:16512884-16512903 None:intergenic 25.0%
!! TAAGCAAAAATCCACATTTT+AGG - chr4.2:16509554-16509573 MS.gene028221:intron 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr4.2:16509653-16509672 MS.gene028221:intron 25.0%
!!! ACTTTCCTTTGTTTTAATGA+AGG - chr4.2:16512068-16512087 MS.gene028221:intron 25.0%
!!! ATGTAATTAGCGTTATTTTC+TGG - chr4.2:16512344-16512363 MS.gene028221:intron 25.0%
!!! ATTGGTTATTTTTCATCTGA+AGG - chr4.2:16509370-16509389 MS.gene028221:intron 25.0%
!!! CAATTTTTTAGCATTAGAGT+AGG + chr4.2:16511179-16511198 None:intergenic 25.0%
!!! GTGTTTTAATGTAACAGATA+GGG - chr4.2:16508541-16508560 MS.gene028221:CDS 25.0%
!!! TGTAATTAGCGTTATTTTCT+GGG - chr4.2:16512345-16512364 MS.gene028221:intron 25.0%
AAACCTTGTGTCAAAAAACT+AGG + chr4.2:16511252-16511271 None:intergenic 30.0%
AAATTTACTGGCAAAGAAAG+GGG - chr4.2:16512406-16512425 MS.gene028221:intron 30.0%
AACACTTGAACAGGAATATT+AGG + chr4.2:16511094-16511113 None:intergenic 30.0%
AACCTTGTGTCAAAAAACTA+GGG + chr4.2:16511251-16511270 None:intergenic 30.0%
AATCCCTCAGTATTTCTTAT+TGG - chr4.2:16512582-16512601 MS.gene028221:intron 30.0%
ACTATGATGAACACTAGTAT+CGG - chr4.2:16512283-16512302 MS.gene028221:intron 30.0%
ACTTGAGTAATTTCCATATC+TGG + chr4.2:16509161-16509180 None:intergenic 30.0%
AGACACCTTCATTAAAACAA+AGG + chr4.2:16512076-16512095 None:intergenic 30.0%
ATATAGTGTGGACAATGAAT+AGG - chr4.2:16508585-16508604 MS.gene028221:CDS 30.0%
ATCCCTCAGTATTTCTTATT+GGG - chr4.2:16512583-16512602 MS.gene028221:intron 30.0%
ATCGTTTAGGCAAGTAAATT+AGG + chr4.2:16511594-16511613 None:intergenic 30.0%
ATTTCACACACTCATTAACA+GGG - chr4.2:16512039-16512058 MS.gene028221:intron 30.0%
ATTTGCCATAGTATAGTAAG+GGG + chr4.2:16512565-16512584 None:intergenic 30.0%
CAATAAAACTGCTTGATACA+AGG + chr4.2:16510698-16510717 None:intergenic 30.0%
CAATAAACTACGAATTTGGT+GGG + chr4.2:16511126-16511145 None:intergenic 30.0%
CCCACATTTGAAAAGTTATA+GGG - chr4.2:16510263-16510282 MS.gene028221:CDS 30.0%
CCTACTGTTTCAAAATTTCA+CGG - chr4.2:16511325-16511344 MS.gene028221:CDS 30.0%
CTACTGTTTCAAAATTTCAC+GGG - chr4.2:16511326-16511345 MS.gene028221:CDS 30.0%
CTTTGTAATAAATGACGCAT+CGG + chr4.2:16508665-16508684 None:intergenic 30.0%
GAAATTTACTGGCAAAGAAA+GGG - chr4.2:16512405-16512424 MS.gene028221:intron 30.0%
GAAGTAAATCATGGAGAAAA+TGG + chr4.2:16509921-16509940 None:intergenic 30.0%
GATTTGCCATAGTATAGTAA+GGG + chr4.2:16512566-16512585 None:intergenic 30.0%
GGACACAATAACTTGATATA+GGG + chr4.2:16511571-16511590 None:intergenic 30.0%
GTTAACATCCTAATATAGTG+TGG - chr4.2:16508573-16508592 MS.gene028221:CDS 30.0%
GTTACATAAGTGAAATGACA+AGG + chr4.2:16509506-16509525 None:intergenic 30.0%
TAAATTCTCACAATCCAGAT+AGG + chr4.2:16511684-16511703 None:intergenic 30.0%
TACTGTTTCAAAATTTCACG+GGG - chr4.2:16511327-16511346 MS.gene028221:CDS 30.0%
TAGAAAATAAATACACCCTC+CGG + chr4.2:16509675-16509694 None:intergenic 30.0%
TCAATAAACTACGAATTTGG+TGG + chr4.2:16511127-16511146 None:intergenic 30.0%
TCATATGTGATATGAAACAC+AGG - chr4.2:16509704-16509723 MS.gene028221:intron 30.0%
TCCCACATTTGAAAAGTTAT+AGG - chr4.2:16510262-16510281 MS.gene028221:CDS 30.0%
TCGTTTAGGCAAGTAAATTA+GGG + chr4.2:16511593-16511612 None:intergenic 30.0%
TCTATAGGTTTCAAAAACCA+GGG - chr4.2:16510814-16510833 MS.gene028221:intron 30.0%
TGCTGAAGAAAAATGGAAAT+GGG - chr4.2:16510159-16510178 MS.gene028221:CDS 30.0%
TGCTTATAATAATGACTGGA+GGG + chr4.2:16509540-16509559 None:intergenic 30.0%
TTAATTACTAGACTGTTGTC+AGG - chr4.2:16511771-16511790 MS.gene028221:intron 30.0%
TTAGGATTAGGATTAGGATT+AGG - chr4.2:16508390-16508409 MS.gene028221:CDS 30.0%
TTCAAGGAATGTTATTGTCA+TGG - chr4.2:16511854-16511873 MS.gene028221:intron 30.0%
TTCATTGTCCACACTATATT+AGG + chr4.2:16508584-16508603 None:intergenic 30.0%
TTGCTTATAATAATGACTGG+AGG + chr4.2:16509541-16509560 None:intergenic 30.0%
! ACCCTATAACTTTTCAAATG+TGG + chr4.2:16510267-16510286 None:intergenic 30.0%
! ATTATGGTGCTGAAGAAAAA+TGG - chr4.2:16510152-16510171 MS.gene028221:CDS 30.0%
! CAATATGCTGTGTTTTTCAT+TGG - chr4.2:16510525-16510544 MS.gene028221:CDS 30.0%
! CCCTATAACTTTTCAAATGT+GGG + chr4.2:16510266-16510285 None:intergenic 30.0%
! TCTCTTTGGAAGTCTTTAAT+AGG - chr4.2:16511912-16511931 MS.gene028221:intron 30.0%
! TGTTGTAATGTTTTCAACCT+TGG - chr4.2:16511019-16511038 MS.gene028221:intron 30.0%
!! TTATTTATGGGATTAGCCAT+CGG - chr4.2:16510768-16510787 MS.gene028221:intron 30.0%
!!! GGTGTTTTAATGTAACAGAT+AGG - chr4.2:16508540-16508559 MS.gene028221:CDS 30.0%
!!! GTCATCTTGATTACTTTTTC+TGG - chr4.2:16512809-16512828 MS.gene028221:intron 30.0%
!!! TATCAAGCAGTTTTATTGTG+TGG - chr4.2:16510700-16510719 MS.gene028221:intron 30.0%
!!! TGGTTTTTGAAACCTATAGA+GGG + chr4.2:16510814-16510833 None:intergenic 30.0%
AAAAACACAGCATATTGTGC+AGG + chr4.2:16510522-16510541 None:intergenic 35.0%
AAAGCTTGTCCATTTATCCT+AGG - chr4.2:16509476-16509495 MS.gene028221:intron 35.0%
AAAGGTTATTATCCCATCCA+GGG + chr4.2:16511355-16511374 None:intergenic 35.0%
AAGCGGACAAGATAAAAGAA+TGG + chr4.2:16508983-16509002 None:intergenic 35.0%
ACTATAAACCTGTCATAGAC+AGG + chr4.2:16512373-16512392 None:intergenic 35.0%
ATAGGGAAATAAGGATCAAG+CGG + chr4.2:16509000-16509019 None:intergenic 35.0%
ATGGGATAATAACCTTTGGA+TGG - chr4.2:16511358-16511377 MS.gene028221:CDS 35.0%
ATGTCTAATCGTGATCGTTT+AGG + chr4.2:16511607-16511626 None:intergenic 35.0%
CAAAAAACTAGGGACATACA+AGG + chr4.2:16511241-16511260 None:intergenic 35.0%
CACAAACAATGTTGACATCT+GGG + chr4.2:16512254-16512273 None:intergenic 35.0%
CCAATTGCAAGGAAATTTAC+TGG - chr4.2:16512394-16512413 MS.gene028221:intron 35.0%
CCAGTAAATTTCCTTGCAAT+TGG + chr4.2:16512397-16512416 None:intergenic 35.0%
CGATGCGTCATTTATTACAA+AGG - chr4.2:16508663-16508682 MS.gene028221:CDS 35.0%
CGTTTAGGCAAGTAAATTAG+GGG + chr4.2:16511592-16511611 None:intergenic 35.0%
CTATAAACCTGTCATAGACA+GGG + chr4.2:16512372-16512391 None:intergenic 35.0%
CTATAGGTTTCAAAAACCAG+GGG - chr4.2:16510815-16510834 MS.gene028221:intron 35.0%
CTCCCAATAAGAAATACTGA+GGG + chr4.2:16512588-16512607 None:intergenic 35.0%
CTCTATAGGTTTCAAAAACC+AGG - chr4.2:16510813-16510832 MS.gene028221:intron 35.0%
GAAGATCAGATAGGGAAATA+AGG + chr4.2:16509009-16509028 None:intergenic 35.0%
GATCATAGTACACTCAAAAC+TGG + chr4.2:16510197-16510216 None:intergenic 35.0%
GATTTCACACACTCATTAAC+AGG - chr4.2:16512038-16512057 MS.gene028221:intron 35.0%
GCAACATTTATACCATCCAA+AGG + chr4.2:16511373-16511392 None:intergenic 35.0%
GCATATGAAAAGGGAAATCA+GGG + chr4.2:16509240-16509259 None:intergenic 35.0%
GCTAATCCCATAAATAAAGC+AGG + chr4.2:16510765-16510784 None:intergenic 35.0%
GGAAATTTACTGGCAAAGAA+AGG - chr4.2:16512404-16512423 MS.gene028221:intron 35.0%
GGATTTGCCATAGTATAGTA+AGG + chr4.2:16512567-16512586 None:intergenic 35.0%
GGGACACAATAACTTGATAT+AGG + chr4.2:16511572-16511591 None:intergenic 35.0%
GGGTTAATATTAGGAACAGT+AGG - chr4.2:16510283-16510302 MS.gene028221:CDS 35.0%
GGTTTATAGTTCCAATTGCA+AGG - chr4.2:16512383-16512402 MS.gene028221:intron 35.0%
GTCACACTTGCAAAAAACAA+GGG - chr4.2:16511041-16511060 MS.gene028221:intron 35.0%
GTGCTGAAGAAAAATGGAAA+TGG - chr4.2:16510158-16510177 MS.gene028221:CDS 35.0%
TAAAATTGTTGTCTCGTGCA+GGG - chr4.2:16510414-16510433 MS.gene028221:CDS 35.0%
TAACTTACTTCTCTACACGA+GGG - chr4.2:16512749-16512768 MS.gene028221:intron 35.0%
TAGTAGTCTCTTGTACGAAA+CGG - chr4.2:16510911-16510930 MS.gene028221:intron 35.0%
TATAGGTTTCAAAAACCAGG+GGG - chr4.2:16510816-16510835 MS.gene028221:intron 35.0%
TCAACATTGTTTGTGGAACA+AGG - chr4.2:16512259-16512278 MS.gene028221:intron 35.0%
TCATACGAGAAGATCAGATA+GGG + chr4.2:16509017-16509036 None:intergenic 35.0%
TCTTCCCTATGATGAACTAT+TGG - chr4.2:16509352-16509371 MS.gene028221:intron 35.0%
TGGATTCCGGATAATTTGAA+CGG - chr4.2:16512784-16512803 MS.gene028221:intron 35.0%
TGTATGGAAATGAAGTCGAT+TGG + chr4.2:16508896-16508915 None:intergenic 35.0%
TTCATACGAGAAGATCAGAT+AGG + chr4.2:16509018-16509037 None:intergenic 35.0%
TTGCACATAATCTACCTATC+TGG - chr4.2:16511667-16511686 MS.gene028221:CDS 35.0%
TTTCTCCTATGATATACTGC+TGG - chr4.2:16509999-16510018 MS.gene028221:intron 35.0%
! ACTATCAAGGGCATATGAAA+AGG + chr4.2:16509250-16509269 None:intergenic 35.0%
! AGTTCTAGCAGATTCTTACT+GGG - chr4.2:16509877-16509896 MS.gene028221:intron 35.0%
! ATAGTATAGTAAGGGGTACA+GGG + chr4.2:16512558-16512577 None:intergenic 35.0%
! CTATCAAGGGCATATGAAAA+GGG + chr4.2:16509249-16509268 None:intergenic 35.0%
! CTTCTCTTTTTCCGTTTTCA+AGG - chr4.2:16511838-16511857 MS.gene028221:intron 35.0%
! GTTTTCAGTCATGTATCTTG+TGG - chr4.2:16509040-16509059 MS.gene028221:intron 35.0%
! TAATAGGTTGAGAAATCCTC+TGG - chr4.2:16511928-16511947 MS.gene028221:intron 35.0%
! TTTTCGGAGTTGCAAAGAAT+GGG - chr4.2:16512430-16512449 MS.gene028221:intron 35.0%
!! AAGGCTTTTTAAAGACCAAC+TGG + chr4.2:16511222-16511241 None:intergenic 35.0%
!! AAGGTATAGTATTGGCATGT+GGG + chr4.2:16508863-16508882 None:intergenic 35.0%
!! AGAAGGGATCATTTTTCAAC+TGG - chr4.2:16510646-16510665 MS.gene028221:CDS 35.0%
!! ATGGTTCGGTTGACTTTAAA+GGG - chr4.2:16509420-16509439 MS.gene028221:intron 35.0%
!! GGCATTCCTGCTTTATTTAT+GGG - chr4.2:16510756-16510775 MS.gene028221:intron 35.0%
!! TCAGGTTTTCTCTTTTGAGT+TGG - chr4.2:16511789-16511808 MS.gene028221:intron 35.0%
!! TGGCATTCCTGCTTTATTTA+TGG - chr4.2:16510755-16510774 MS.gene028221:intron 35.0%
!!! ATTTTGAAACAGTAGGTTGC+TGG + chr4.2:16511321-16511340 None:intergenic 35.0%
!!! CCGTGAAATTTTGAAACAGT+AGG + chr4.2:16511328-16511347 None:intergenic 35.0%
!!! CTGGTTTTTGAAACCTATAG+AGG + chr4.2:16510815-16510834 None:intergenic 35.0%
!!! CTTTTTGAGATAGTGTTGCT+GGG - chr4.2:16508768-16508787 MS.gene028221:CDS 35.0%
!!! GGTTTTTGAAACCTATAGAG+GGG + chr4.2:16510813-16510832 None:intergenic 35.0%
!!! GTACACTCAAAACTGGTTTT+TGG + chr4.2:16510190-16510209 None:intergenic 35.0%
!!! TACTTTTTCTGGCTTTTAGC+TGG - chr4.2:16512820-16512839 MS.gene028221:intron 35.0%
!!! TCTTTTTGAGATAGTGTTGC+TGG - chr4.2:16508767-16508786 MS.gene028221:CDS 35.0%
!!! TTCTCTTTTGAGTTGGCTAA+TGG - chr4.2:16511796-16511815 MS.gene028221:intron 35.0%
!!! TTTTTGAGATAGTGTTGCTG+GGG - chr4.2:16508769-16508788 MS.gene028221:CDS 35.0%
AAATTATCCGGAATCCATCC+AGG + chr4.2:16512781-16512800 None:intergenic 40.0%
AACTTACTTCTCTACACGAG+GGG - chr4.2:16512750-16512769 MS.gene028221:intron 40.0%
ACAAAGGAGTCGTCAAATAG+CGG - chr4.2:16508679-16508698 MS.gene028221:CDS 40.0%
ACAAGAGACTACTATCCTCA+GGG + chr4.2:16510905-16510924 None:intergenic 40.0%
ACATGAAGGAAATGTCTCTG+CGG - chr4.2:16509799-16509818 MS.gene028221:intron 40.0%
ACTTCGATTGTTGGTCGATT+TGG - chr4.2:16509118-16509137 MS.gene028221:intron 40.0%
AGTAAGCTTTACACAGGAGA+TGG - chr4.2:16509401-16509420 MS.gene028221:intron 40.0%
ATTCAAGAAAATGCAGGCTG+GGG - chr4.2:16510723-16510742 MS.gene028221:intron 40.0%
ATTCCGGATAATTTGAACGG+AGG - chr4.2:16512787-16512806 MS.gene028221:intron 40.0%
ATTGTCATGGACAGTTCTGT+AGG - chr4.2:16511867-16511886 MS.gene028221:intron 40.0%
CAAAGGTTATTATCCCATCC+AGG + chr4.2:16511356-16511375 None:intergenic 40.0%
CATAGCCAGCAGTATATCAT+AGG + chr4.2:16510007-16510026 None:intergenic 40.0%
CCACAAACAATGTTGACATC+TGG + chr4.2:16512255-16512274 None:intergenic 40.0%
CCAGATGTCAACATTGTTTG+TGG - chr4.2:16512252-16512271 MS.gene028221:intron 40.0%
CTGGATGGGATAATAACCTT+TGG - chr4.2:16511354-16511373 MS.gene028221:CDS 40.0%
CTGTACCCCTTACTATACTA+TGG - chr4.2:16512557-16512576 MS.gene028221:intron 40.0%
GAAGAGAGTAAGCTTTACAC+AGG - chr4.2:16509395-16509414 MS.gene028221:intron 40.0%
GAGTTCTTTCATTCTCACTG+TGG - chr4.2:16512726-16512745 MS.gene028221:intron 40.0%
GAGTTGCAAAGAATGGGAAT+TGG - chr4.2:16512436-16512455 MS.gene028221:intron 40.0%
GATTCAAGAAAATGCAGGCT+GGG - chr4.2:16510722-16510741 MS.gene028221:intron 40.0%
GCCTAAAAAGAAACTTCCGA+TGG + chr4.2:16510787-16510806 None:intergenic 40.0%
GCTCCCAATAAGAAATACTG+AGG + chr4.2:16512589-16512608 None:intergenic 40.0%
GGCATATGAAAAGGGAAATC+AGG + chr4.2:16509241-16509260 None:intergenic 40.0%
GGTCACACTTGCAAAAAACA+AGG - chr4.2:16511040-16511059 MS.gene028221:intron 40.0%
GTAAAATTGTTGTCTCGTGC+AGG - chr4.2:16510413-16510432 MS.gene028221:CDS 40.0%
GTAACTTACTTCTCTACACG+AGG - chr4.2:16512748-16512767 MS.gene028221:intron 40.0%
GTCGATTGGACAAAAGTAGA+AGG + chr4.2:16508882-16508901 None:intergenic 40.0%
GTGGTGACTATTCTAACCTT+TGG - chr4.2:16512134-16512153 MS.gene028221:intron 40.0%
GTGTGGATTCAAGAAAATGC+AGG - chr4.2:16510717-16510736 MS.gene028221:intron 40.0%
GTTCTAGCAGATTCTTACTG+GGG - chr4.2:16509878-16509897 MS.gene028221:intron 40.0%
TACAAGAGACTACTATCCTC+AGG + chr4.2:16510906-16510925 None:intergenic 40.0%
TAGAGCATAGTGATGAACTG+AGG - chr4.2:16510970-16510989 MS.gene028221:intron 40.0%
TATTTGGGGACTTCGATTGT+TGG - chr4.2:16509109-16509128 MS.gene028221:intron 40.0%
TCACTTCTGACTACTTCACT+GGG - chr4.2:16512694-16512713 MS.gene028221:intron 40.0%
TGACCTCCGTTCAAATTATC+CGG + chr4.2:16512793-16512812 None:intergenic 40.0%
TGCTCGAGAAGGAATAAGTT+TGG + chr4.2:16510219-16510238 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr4.2:16509657-16509676 MS.gene028221:intron 40.0%
TGTATATGTAAGGGTCCAGT+TGG - chr4.2:16511204-16511223 MS.gene028221:CDS 40.0%
TGTGAACGTTTGGCATACTA+CGG - chr4.2:16509737-16509756 MS.gene028221:intron 40.0%
TTAAGCAGAATACTGGCAAC+TGG - chr4.2:16509453-16509472 MS.gene028221:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr4.2:16509656-16509675 MS.gene028221:intron 40.0%
! AAACCATGTGTGTCCTCTTT+TGG - chr4.2:16510582-16510601 MS.gene028221:CDS 40.0%
! AAACTACGAATTTGGTGGGA+AGG + chr4.2:16511122-16511141 None:intergenic 40.0%
! AACCATGTGTGTCCTCTTTT+GGG - chr4.2:16510583-16510602 MS.gene028221:CDS 40.0%
! AGTTTGATGATACTGATCCC+CGG - chr4.2:16510613-16510632 MS.gene028221:CDS 40.0%
! ATGTAGCTTGCGAGTAAGAT+AGG + chr4.2:16509783-16509802 None:intergenic 40.0%
! CAGTTCTAGCAGATTCTTAC+TGG - chr4.2:16509876-16509895 MS.gene028221:intron 40.0%
! CATAGTATAGTAAGGGGTAC+AGG + chr4.2:16512559-16512578 None:intergenic 40.0%
! CTTTTCGGAGTTGCAAAGAA+TGG - chr4.2:16512429-16512448 MS.gene028221:intron 40.0%
! GCCATCGGAAGTTTCTTTTT+AGG - chr4.2:16510783-16510802 MS.gene028221:intron 40.0%
! GGATGTGTTATTGAATCCTG+CGG + chr4.2:16508840-16508859 None:intergenic 40.0%
! TAGCGGATATAGCACTTGAA+TGG - chr4.2:16508696-16508715 MS.gene028221:CDS 40.0%
!! AGCAGAAGTATTCACATTCG+TGG - chr4.2:16512609-16512628 MS.gene028221:intron 40.0%
!! AGGTATAGTATTGGCATGTG+GGG + chr4.2:16508862-16508881 None:intergenic 40.0%
!! CAGAAGTATTCACATTCGTG+GGG - chr4.2:16512611-16512630 MS.gene028221:intron 40.0%
!! GAAGGTATAGTATTGGCATG+TGG + chr4.2:16508864-16508883 None:intergenic 40.0%
!! GATGGTTCGGTTGACTTTAA+AGG - chr4.2:16509419-16509438 MS.gene028221:intron 40.0%
!! GCAGAAGTATTCACATTCGT+GGG - chr4.2:16512610-16512629 MS.gene028221:intron 40.0%
!!! GTCCCTAGTTTTTTGACACA+AGG - chr4.2:16511246-16511265 MS.gene028221:CDS 40.0%
!!! GTTTTTTGCAAGTGTGACCA+AGG + chr4.2:16511039-16511058 None:intergenic 40.0%
AAACTGATCTGCCCCAAAAG+AGG + chr4.2:16510598-16510617 None:intergenic 45.0%
ACCTGGCACATTCTTGTAAG+AGG + chr4.2:16510846-16510865 None:intergenic 45.0%
ACGCGATGAATCTTCCTCTA+CGG + chr4.2:16508216-16508235 None:intergenic 45.0%
ACTTACTTCTCTACACGAGG+GGG - chr4.2:16512751-16512770 MS.gene028221:intron 45.0%
AGCACTGCATAAACTTCGCA+TGG + chr4.2:16512671-16512690 None:intergenic 45.0%
AGGTGTCTGTATCTGCTTGA+TGG - chr4.2:16510303-16510322 MS.gene028221:CDS 45.0%
ATAATGCCAGTAGCCCAAAC+TGG + chr4.2:16512214-16512233 None:intergenic 45.0%
ATCCCTTCTTAACCCTTTCC+CGG + chr4.2:16510635-16510654 None:intergenic 45.0%
ATGCAAATACGGCAACACAC+TGG + chr4.2:16511499-16511518 None:intergenic 45.0%
ATGTTTCCAGTTTGGGCTAC+TGG - chr4.2:16512205-16512224 MS.gene028221:intron 45.0%
ATTCTTACTGGGGACGATAC+TGG - chr4.2:16509888-16509907 MS.gene028221:intron 45.0%
ATTGAAGCCTGCTGAGTGTT+TGG - chr4.2:16510473-16510492 MS.gene028221:CDS 45.0%
CAAGGCTTGCCTAGGATAAA+TGG + chr4.2:16509488-16509507 None:intergenic 45.0%
CATAAACTTCGCATGGCATC+TGG + chr4.2:16512664-16512683 None:intergenic 45.0%
CCAGTATTCTGCTTAAGCAC+GGG + chr4.2:16509449-16509468 None:intergenic 45.0%
CCTGGCACATTCTTGTAAGA+GGG + chr4.2:16510845-16510864 None:intergenic 45.0%
CTGGGGTTTGTACCAATTCA+TGG - chr4.2:16508786-16508805 MS.gene028221:CDS 45.0%
CTTACTCGCAAGCTACATGA+AGG - chr4.2:16509785-16509804 MS.gene028221:intron 45.0%
GACAAGAGCTCTGCAATTGA+AGG - chr4.2:16510936-16510955 MS.gene028221:intron 45.0%
GCCAGTATTCTGCTTAAGCA+CGG + chr4.2:16509450-16509469 None:intergenic 45.0%
GCTCTGCAATTGAAGGAAGT+CGG - chr4.2:16510943-16510962 MS.gene028221:intron 45.0%
GCTTTACACAGGAGATGGTT+CGG - chr4.2:16509406-16509425 MS.gene028221:intron 45.0%
GGAACAAGTGATCAGTCTTC+AGG + chr4.2:16511550-16511569 None:intergenic 45.0%
GGAAGATTCATCGCGTACTT+TGG - chr4.2:16508220-16508239 MS.gene028221:CDS 45.0%
GGATTCAAGAAAATGCAGGC+TGG - chr4.2:16510721-16510740 MS.gene028221:intron 45.0%
GTCACTTCTGACTACTTCAC+TGG - chr4.2:16512693-16512712 MS.gene028221:intron 45.0%
TACAAGAATGTGCCAGGTTG+TGG - chr4.2:16510848-16510867 MS.gene028221:intron 45.0%
TCAAAAGTTGAGAGGGAAGC+TGG + chr4.2:16512325-16512344 None:intergenic 45.0%
TCACAGTGCAAAGTCTCCAA+AGG + chr4.2:16512153-16512172 None:intergenic 45.0%
TCTGATGCTGAGAGGAAAAG+TGG - chr4.2:16512115-16512134 MS.gene028221:intron 45.0%
TGAAATGACAAGGCTTGCCT+AGG + chr4.2:16509496-16509515 None:intergenic 45.0%
TGTGCAAAGTTGCGCGATAA+AGG + chr4.2:16511654-16511673 None:intergenic 45.0%
TGTTACCTTGCACCTCTCAT+TGG - chr4.2:16509851-16509870 MS.gene028221:intron 45.0%
TTGAAGCCTGCTGAGTGTTT+GGG - chr4.2:16510474-16510493 MS.gene028221:CDS 45.0%
! ACCATGTGTGTCCTCTTTTG+GGG - chr4.2:16510584-16510603 MS.gene028221:CDS 45.0%
! AGGTTGTGGCTGCATCTTTT+CGG - chr4.2:16510862-16510881 MS.gene028221:intron 45.0%
! ATAGTAAGGGGTACAGGGAT+AGG + chr4.2:16512553-16512572 None:intergenic 45.0%
! ATCTTTTCGGAAGCGGAATC+TGG - chr4.2:16510875-16510894 MS.gene028221:intron 45.0%
! ATTATAGTCGGTGCTCGAGA+AGG + chr4.2:16510230-16510249 None:intergenic 45.0%
! CAATGAGTGCTGTGAACGTT+TGG - chr4.2:16509727-16509746 MS.gene028221:intron 45.0%
! GTTTGATGATACTGATCCCC+GGG - chr4.2:16510614-16510633 MS.gene028221:CDS 45.0%
! TCTCTGCTGCTTATGTGGAT+TGG - chr4.2:16508811-16508830 MS.gene028221:CDS 45.0%
! TGGCAAAGAAAGGGGCTTTT+CGG - chr4.2:16512414-16512433 MS.gene028221:intron 45.0%
! TTTTAGGCACACCCCTCTAT+AGG - chr4.2:16510799-16510818 MS.gene028221:intron 45.0%
!! GGAAGAAGCTCTTGTTGTTC+AGG - chr4.2:16508241-16508260 MS.gene028221:CDS 45.0%
!! GGTATAGTATTGGCATGTGG+GGG + chr4.2:16508861-16508880 None:intergenic 45.0%
!! TCGATTGTTGGTCGATTTGG+TGG - chr4.2:16509121-16509140 MS.gene028221:intron 45.0%
!! TTATGTGGATTGGTTTCCGC+AGG - chr4.2:16508821-16508840 MS.gene028221:CDS 45.0%
AAAGTTGAGAGGGAAGCTGG+TGG + chr4.2:16512322-16512341 None:intergenic 50.0%
AAGGCGTGCAACACTTGAAC+AGG + chr4.2:16511103-16511122 None:intergenic 50.0%
AAGTTGAGAGGGAAGCTGGT+GGG + chr4.2:16512321-16512340 None:intergenic 50.0%
ACTTTGCACTGTGACACAGG+TGG - chr4.2:16512159-16512178 MS.gene028221:intron 50.0%
AGACACGTCACTACTTGGCA+AGG - chr4.2:16509824-16509843 MS.gene028221:intron 50.0%
ATGATACTGATCCCCGGGAA+AGG - chr4.2:16510619-16510638 MS.gene028221:CDS 50.0%
ATTGTGCAGGAGTAGCTGGA+GGG + chr4.2:16510509-16510528 None:intergenic 50.0%
CAAAATTTCACGGGGAACCC+TGG - chr4.2:16511335-16511354 MS.gene028221:CDS 50.0%
CCCGTGCTTAAGCAGAATAC+TGG - chr4.2:16509446-16509465 MS.gene028221:intron 50.0%
CCCTCTTACAAGAATGTGCC+AGG - chr4.2:16510842-16510861 MS.gene028221:intron 50.0%
CTGTAGTCTCTGATGCTGAG+AGG - chr4.2:16512107-16512126 MS.gene028221:intron 50.0%
GAAAAGATGCAGCCACAACC+TGG + chr4.2:16510863-16510882 None:intergenic 50.0%
GAGACTTTGCACTGTGACAC+AGG - chr4.2:16512156-16512175 MS.gene028221:intron 50.0%
GCAGCAGAGAGTCCATGAAT+TGG + chr4.2:16508801-16508820 None:intergenic 50.0%
GCATATTGTGCAGGAGTAGC+TGG + chr4.2:16510513-16510532 None:intergenic 50.0%
GCTAGAACTGCTCCAATGAG+AGG + chr4.2:16509866-16509885 None:intergenic 50.0%
GTCTCTACCTGATTGCGCTT+GGG - chr4.2:16510547-16510566 MS.gene028221:CDS 50.0%
TATTGTGCAGGAGTAGCTGG+AGG + chr4.2:16510510-16510529 None:intergenic 50.0%
TCCCTTCTTAACCCTTTCCC+GGG + chr4.2:16510634-16510653 None:intergenic 50.0%
TGATACTGATCCCCGGGAAA+GGG - chr4.2:16510620-16510639 MS.gene028221:CDS 50.0%
TGCAGATTGCGAACGAGCTT+GGG - chr4.2:16512515-16512534 MS.gene028221:intron 50.0%
TGTTGTCTCGTGCAGGGAAT+GGG - chr4.2:16510420-16510439 MS.gene028221:CDS 50.0%
TTCGCATGGCATCTGGAGAT+TGG + chr4.2:16512657-16512676 None:intergenic 50.0%
TTGTTGTCTCGTGCAGGGAA+TGG - chr4.2:16510419-16510438 MS.gene028221:CDS 50.0%
! GGGAAATCCTGGATGGATTC+CGG - chr4.2:16512771-16512790 MS.gene028221:intron 50.0%
! TGGACTCTCTGCTGCTTATG+TGG - chr4.2:16508806-16508825 MS.gene028221:CDS 50.0%
! TGGCTGCATCTTTTCGGAAG+CGG - chr4.2:16510868-16510887 MS.gene028221:intron 50.0%
!! CATGTCAGCAGCTGCTGTTT+TGG - chr4.2:16512480-16512499 MS.gene028221:intron 50.0%
ATTTCACGGGGAACCCTGGA+TGG - chr4.2:16511339-16511358 MS.gene028221:CDS 55.0%
CACTCAGCAGGCTTCAATGC+TGG + chr4.2:16510471-16510490 None:intergenic 55.0%
CCCCGGGAAAGGGTTAAGAA+GGG - chr4.2:16510630-16510649 MS.gene028221:CDS 55.0%
CCCTTCTTAACCCTTTCCCG+GGG + chr4.2:16510633-16510652 None:intergenic 55.0%
CGGCAAGACACGTCACTACT+TGG - chr4.2:16509819-16509838 MS.gene028221:intron 55.0%
CTGCAGATTGCGAACGAGCT+TGG - chr4.2:16512514-16512533 MS.gene028221:intron 55.0%
GAAAATGCAGGCTGGGGTCT+TGG - chr4.2:16510729-16510748 MS.gene028221:intron 55.0%
GCCCCAAAAGAGGACACACA+TGG + chr4.2:16510588-16510607 None:intergenic 55.0%
GGTCTCTACCTGATTGCGCT+TGG - chr4.2:16510546-16510565 MS.gene028221:CDS 55.0%
TACCTGATTGCGCTTGGGAC+TGG - chr4.2:16510552-16510571 MS.gene028221:CDS 55.0%
TCCCCGGGAAAGGGTTAAGA+AGG - chr4.2:16510629-16510648 MS.gene028221:CDS 55.0%
TCTACACGAGGGGGAAATCC+TGG - chr4.2:16512760-16512779 MS.gene028221:intron 55.0%
TCTGGGTCCCTGTCTATGAC+AGG - chr4.2:16512362-16512381 MS.gene028221:intron 55.0%
TTGCACTGTGACACAGGTGG+AGG - chr4.2:16512162-16512181 MS.gene028221:intron 55.0%
TTTCACGGGGAACCCTGGAT+GGG - chr4.2:16511340-16511359 MS.gene028221:CDS 55.0%
! CTGCTCCAATGAGAGGTGCA+AGG + chr4.2:16509859-16509878 None:intergenic 55.0%
CACCAGTCCCAAGCGCAATC+AGG + chr4.2:16510557-16510576 None:intergenic 60.0%
CACGAGGGGGAAATCCTGGA+TGG - chr4.2:16512764-16512783 MS.gene028221:intron 60.0%
CTGATTGCGCTTGGGACTGG+TGG - chr4.2:16510555-16510574 MS.gene028221:CDS 60.0%
CTTGTAAGAGGGCTTCCCCC+TGG + chr4.2:16510834-16510853 None:intergenic 60.0%
GCAGCACCCAAACACTCAGC+AGG + chr4.2:16510483-16510502 None:intergenic 60.0%
GCAGGCTGGGGTCTTGGATT+TGG - chr4.2:16510735-16510754 MS.gene028221:intron 60.0%
GCGGAATCTGGATGTCCCTG+AGG - chr4.2:16510887-16510906 MS.gene028221:intron 60.0%
TGCGAACGAGCTTGGGCTTG+TGG - chr4.2:16512522-16512541 MS.gene028221:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 16508206 16512912 16508206 ID=MS.gene028221
chr4.2 mRNA 16508206 16512912 16508206 ID=MS.gene028221.t1;Parent=MS.gene028221
chr4.2 exon 16512856 16512912 16512856 ID=MS.gene028221.t1.exon1;Parent=MS.gene028221.t1
chr4.2 CDS 16512856 16512912 16512856 ID=cds.MS.gene028221.t1;Parent=MS.gene028221.t1
chr4.2 exon 16511621 16511726 16511621 ID=MS.gene028221.t1.exon2;Parent=MS.gene028221.t1
chr4.2 CDS 16511621 16511726 16511621 ID=cds.MS.gene028221.t1;Parent=MS.gene028221.t1
chr4.2 exon 16511175 16511392 16511175 ID=MS.gene028221.t1.exon3;Parent=MS.gene028221.t1
chr4.2 CDS 16511175 16511392 16511175 ID=cds.MS.gene028221.t1;Parent=MS.gene028221.t1
chr4.2 exon 16510127 16510683 16510127 ID=MS.gene028221.t1.exon4;Parent=MS.gene028221.t1
chr4.2 CDS 16510127 16510683 16510127 ID=cds.MS.gene028221.t1;Parent=MS.gene028221.t1
chr4.2 exon 16508206 16509028 16508206 ID=MS.gene028221.t1.exon5;Parent=MS.gene028221.t1
chr4.2 CDS 16508206 16509028 16508206 ID=cds.MS.gene028221.t1;Parent=MS.gene028221.t1
Gene Sequence

>MS.gene028221

ATGGGTTCCGTAGAGGAAGATTCATCGCGTACTTTGGAAGAAGCTCTTGTTGTTCAGGTTCAATTCTCTTTTTTCATTTTTCGCTTTTTTTCGTTGAGTCAACCCTCTATTGATTTGTTATTTATCACAATATTAACTATTCATTCGCTCAGTATGAATCTTCCAATTACTATACTTATTATTATTAGGATTAGGATTAGGATTAGGACTCCATTGTTCAATTAATAAAATTAACTTATATAACTGGAAACTTCAATTGTGTGTTTAAATAAAACACACCTTATTCAACTCTTGATCATAACATAACAATCATTAAATAATCAAACACACAAATGGTGTTTTAATGTAACAGATAGGGTCTATTCAAGTTAACATCCTAATATAGTGTGGACAATGAATAGGTCAAACTGTTGAGCTGTGTGAGCATGTAAAATTTGAACAAATCATTATTGTTTTCCGATGCGTCATTTATTACAAAGGAGTCGTCAAATAGCGGATATAGCACTTGAATGGACAGTTGTTTTCAGCGATCTGCAGTTTAAAACACTGTCTTGTATTTGTTCTTTTTGAGATAGTGTTGCTGGGGTTTGTACCAATTCATGGACTCTCTGCTGCTTATGTGGATTGGTTTCCGCAGGATTCAATAACACATCCCCCACATGCCAATACTATACCTTCTACTTTTGTCCAATCGACTTCATTTCCATACAATTATTATTAGGTTATTACAGTTGTAACTCATCCTAATCATAGTCACTTTACTTACTCATAATTCCATTCTTTTATCTTGTCCGCTTGATCCTTATTTCCCTATCTGATCTTCTCGTATGAACTGTTTTCAGTCATGTATCTTGTGGTTGTAAGTTAGACATGATAGTAGATTTATTTCAATGTTTTTATTACTATTTGGGGACTTCGATTGTTGGTCGATTTGGTGGATAGAATATCATAACCAGATATGGAAATTACTCAAGTATCAACTACAGTACTTTGTTGTTCAAATCTACTTTATATTTAGTTAATTGTCAATACCCTGATTTCCCTTTTCATATGCCCTTGATAGTTAAATGTCAAATAATTTTTTAATTTCAAATTGTGAAATAGCGAAATTGTTTTCTATAATCAGCATTTTTTTTTTTTTTTTACTCTTCCCTATGATGAACTATTGGTTATTTTTCATCTGAAGGATGAAGAGAGTAAGCTTTACACAGGAGATGGTTCGGTTGACTTTAAAGGGAGACCCGTGCTTAAGCAGAATACTGGCAACTGGAAAGCTTGTCCATTTATCCTAGGCAAGCCTTGTCATTTCACTTATGTAACAAATATTTACACCCTCCAGTCATTATTATAAGCAAAAATCCACATTTTAGGTTCATTCAATAAATGATGTATGTAGTCTATATTAAAGACTACATACATCATTTATTGAATGAACTTAAAATGTGGATTTTTGCTTATAATAGTGACCGGAGGGTGTATTTATTTTCTAAAGTTGAACTCATATGTGATATGAAACACAGGCAATGAGTGCTGTGAACGTTTGGCATACTACGGCATTGCAACAAATCTTGTTACCTATCTTACTCGCAAGCTACATGAAGGAAATGTCTCTGCGGCAAGACACGTCACTACTTGGCAAGGCACTTGTTACCTTGCACCTCTCATTGGAGCAGTTCTAGCAGATTCTTACTGGGGACGATACTGGACAATTGCCATTTTCTCCATGATTTACTTCATTGTAATTATAAACCAAGATATTTTTATTCTCCTATTTATAAAATTCTCTACACACATTTCTCCTATGATATACTGCTGGCTATGCATTATATAGTATCCTACATAATGTAATTTGTGATGGTAATAGGATGTCATCAAACCATTTCTAAATCTTCTTTATATGGGGAAGTTAAATTCTTTTATACATTTTATAGTTATAAGAAACAAATATTATGGTGCTGAAGAAAAATGGAAATGGGAGAATCCAAAAACCAGTTTTGAGTGTACTATGATCCAAACTTATTCCTTCTCGAGCACCGACTATAATACTCAAATTCATTCCCACATTTGAAAAGTTATAGGGTTAATATTAGGAACAGTAGGTGTCTGTATCTGCTTGATGGTATAATTGTATTCTCATCATTTTGTTTTTCTGTGCATCATTTTCATCTACATGCTTTATATTCAAATGTCTTTACATGTTTTAATATGTAAAATTGTTGTCTCGTGCAGGGAATGGGTACATTAACTCTTTCTGCATCTATTCCAGCATTGAAGCCTGCTGAGTGTTTGGGTGCTGCATGCCCTCCAGCTACTCCTGCACAATATGCTGTGTTTTTCATTGGTCTCTACCTGATTGCGCTTGGGACTGGTGGCATTAAACCATGTGTGTCCTCTTTTGGGGCAGATCAGTTTGATGATACTGATCCCCGGGAAAGGGTTAAGAAGGGATCATTTTTCAACTGGTTTTACTTTTCTATCAACATAGGAGCCCTTGTATCAAGCAGTTTTATTGTGTGGATTCAAGAAAATGCAGGCTGGGGTCTTGGATTTGGCATTCCTGCTTTATTTATGGGATTAGCCATCGGAAGTTTCTTTTTAGGCACACCCCTCTATAGGTTTCAAAAACCAGGGGGAAGCCCTCTTACAAGAATGTGCCAGGTTGTGGCTGCATCTTTTCGGAAGCGGAATCTGGATGTCCCTGAGGATAGTAGTCTCTTGTACGAAACGGAAGACAAGAGCTCTGCAATTGAAGGAAGTCGGAAATTAGAGCATAGTGATGAACTGAGGTGATTATTCCCTTACTTTAAATTTAATGTTGTAATGTTTTCAACCTTGGTCACACTTGCAAAAAACAAGGGAGTATGTTCTGTGAAAAATAACTTATTCCTAATATTCCTGTTCAAGTGTTGCACGCCTTCCCACCAAATTCGTAGTTTATTGATTTAGAGTAATGTAATTTCAAATATAAGCCCTACTCTAATGCTAAAAAATTGGAAGTTGTATATGTAAGGGTCCAGTTGGTCTTTAAAAAGCCTTGTATGTCCCTAGTTTTTTGACACAAGGTTTTCACTGATTAAACTATCACCATCTTTGATTTTTTTTTTGACTAATACCAGCAACCTACTGTTTCAAAATTTCACGGGGAACCCTGGATGGGATAATAACCTTTGGATGGTATAAATGTTGCTAGATTTATGATATTTCTTTCATTCACACATTCTGTATGAATTGCGTTGCTTTTGAGATCTATGATTTATTGGAAAAAAATTTCTTCTTTGTACTTATATTTGCCAGTGTGTTGCCGTATTTGCATTTTATGTGAAAGCATATTTTTTTTTTATCCTGAAGACTGATCACTTGTTCCCTATATCAAGTTATTGTGTCCCCTAATTTACTTGCCTAAACGATCACGATTAGACATTTATGTTGAACATTTTAGATTTTTCCTTTATCGCGCAACTTTGCACATAATCTACCTATCTGGATTGTGAGAATTTACTTTACAAGCTTTATTTACTTTCTCTCAAAAAGAAACAAAGCTTTATTTACTTCGGACTTGCTATCTTTAATTACTAGACTGTTGTCAGGTTTTCTCTTTTGAGTTGGCTAATGGCTGATTCATTGTTTTCTTGCTTCTCTTTTTCCGTTTTCAAGGAATGTTATTGTCATGGACAGTTCTGTAGGATAGACTGCATGTAAACAATTTTCTCTTTGGAAGTCTTTAATAGGTTGAGAAATCCTCTGGTAAAAAATTTCTAATATTTAGCTTGTGTCCTAATAATAATTTGTGTTGTTATCAATAAAGGCTTAAGTATGCTTACTTGCTTCAGAAGATTTCACACACTCATTAACAGGGCTTTCTACTTTCCTTTGTTTTAATGAAGGTGTCTTGACAGAGCAGCTGTAGTCTCTGATGCTGAGAGGAAAAGTGGTGACTATTCTAACCTTTGGAGACTTTGCACTGTGACACAGGTGGAGGAATTGAAAATCTTGATCCGCATGTTTCCAGTTTGGGCTACTGGCATTATTTTTTCTGCTGTCTATGCCCAGATGTCAACATTGTTTGTGGAACAAGGAACTATGATGAACACTAGTATCGGTTCTTTCAAAATCCCACCAGCTTCCCTCTCAACTTTTGATGTAATTAGCGTTATTTTCTGGGTCCCTGTCTATGACAGGTTTATAGTTCCAATTGCAAGGAAATTTACTGGCAAAGAAAGGGGCTTTTCGGAGTTGCAAAGAATGGGAATTGGCCTTTTTATTTCAATCTTGTGCATGTCAGCAGCTGCTGTTTTGGAGATTAAACGTCTGCAGATTGCGAACGAGCTTGGGCTTGTGGATGAACCTATCCCTGTACCCCTTACTATACTATGGCAAATCCCTCAGTATTTCTTATTGGGAGCAGCAGAAGTATTCACATTCGTGGGGCAGCTTGAGTTCTTCTATGACCAATCTCCAGATGCCATGCGAAGTTTATGCAGTGCTTTGTCACTTCTGACTACTTCACTGGGAAATTACTTGAGTTCTTTCATTCTCACTGTGGTAACTTACTTCTCTACACGAGGGGGAAATCCTGGATGGATTCCGGATAATTTGAACGGAGGTCATCTTGATTACTTTTTCTGGCTTTTAGCTGGACTTAGCTTCTTAAATATGTTGATGTACACAGTTGTTGCCAAAAGATACAAGAAAAAGAAGGCTTCTTAA
Protein sequence

>MS.gene028221.t1

MGSVEEDSSRTLEEALVVQDEESKLYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIATNLVTYLTRKLHEGNVSAARHVTTWQGTCYLAPLIGAVLADSYWGRYWTIAIFSMIYFIGMGTLTLSASIPALKPAECLGAACPPATPAQYAVFFIGLYLIALGTGGIKPCVSSFGADQFDDTDPRERVKKGSFFNWFYFSINIGALVSSSFIVWIQENAGWGLGFGIPALFMGLAIGSFFLGTPLYRFQKPGGSPLTRMCQVVAASFRKRNLDVPEDSSLLYETEDKSSAIEGSRKLEHSDELRCLDRAAVVSDAERKSGDYSNLWRLCTVTQVEELKILIRMFPVWATGIIFSAVYAQMSTLFVEQGTMMNTSIGSFKIPPASLSTFDVISVIFWVPVYDRFIVPIARKFTGKERGFSELQRMGIGLFISILCMSAAAVLEIKRLQIANELGLVDEPIPVPLTILWQIPQYFLLGAAEVFTFVGQLEFFYDQSPDAMRSLCSALSLLTTSLGNYLSSFILTVVTYFSTRGGNPGWIPDNLNGGHLDYFFWLLAGLSFLNMLMYTVVAKRYKKKKAS