AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51032


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51032.t1 MTR_4g107510 97.990 597 12 0 1 597 1 597 0.0 1207
MS.gene51032.t1 MTR_4g107580 69.069 569 174 2 18 584 5 573 0.0 852
MS.gene51032.t1 MTR_4g107530 68.213 582 183 2 10 590 7 587 0.0 840
MS.gene51032.t1 MTR_5g038060 48.527 577 275 8 14 584 17 577 0.0 552
MS.gene51032.t1 MTR_8g469480 47.740 553 275 6 38 584 40 584 0.0 530
MS.gene51032.t1 MTR_8g469470 40.901 577 326 7 17 584 11 581 1.91e-157 464
MS.gene51032.t1 MTR_5g038190 39.330 567 330 9 24 584 10 568 1.89e-150 446
MS.gene51032.t1 MTR_4g107610 40.876 548 307 7 39 581 34 569 3.08e-147 438
MS.gene51032.t1 MTR_8g103233 39.071 581 338 8 18 596 2 568 4.50e-140 419
MS.gene51032.t1 MTR_7g088825 37.847 576 341 9 15 584 1 565 1.01e-137 414
MS.gene51032.t1 MTR_7g064800 39.184 564 323 7 39 593 29 581 2.12e-134 405
MS.gene51032.t1 MTR_7g088790 38.462 585 330 14 15 584 3 572 6.29e-134 404
MS.gene51032.t1 MTR_7g064780 36.888 572 338 8 16 579 9 565 1.50e-133 403
MS.gene51032.t1 MTR_5g055000 36.678 578 345 7 10 585 3 561 2.93e-133 402
MS.gene51032.t1 MTR_2g101640 37.435 577 336 8 15 581 1 562 8.53e-131 397
MS.gene51032.t1 MTR_7g067010 37.500 552 332 7 40 590 28 567 1.53e-130 394
MS.gene51032.t1 MTR_3g462710 35.945 587 351 7 7 589 3 568 2.76e-130 394
MS.gene51032.t1 MTR_4g015080 36.007 586 338 9 6 585 18 572 3.11e-129 391
MS.gene51032.t1 MTR_4g011280 36.097 579 357 10 18 593 13 581 2.34e-128 390
MS.gene51032.t1 MTR_2g101650 37.943 564 320 10 30 581 18 563 9.51e-128 388
MS.gene51032.t1 MTR_1g009200 38.504 548 319 9 39 581 30 564 2.92e-126 384
MS.gene51032.t1 MTR_1g026740 36.283 565 346 8 18 581 2 553 5.06e-126 382
MS.gene51032.t1 MTR_7g088820 34.669 574 358 9 17 584 6 568 4.75e-123 376
MS.gene51032.t1 MTR_3g112450 36.116 551 331 5 39 587 26 557 3.61e-121 370
MS.gene51032.t1 MTR_2g101610 37.168 565 343 8 20 581 11 566 6.76e-120 369
MS.gene51032.t1 MTR_1g026770 36.648 543 334 6 39 581 18 550 2.09e-119 365
MS.gene51032.t1 MTR_2g101590 36.898 561 342 8 24 581 14 565 3.98e-119 367
MS.gene51032.t1 MTR_2g101560 38.053 565 338 8 20 581 11 566 5.78e-118 364
MS.gene51032.t1 MTR_1g026750 36.396 566 343 9 21 581 1 554 1.17e-117 361
MS.gene51032.t1 MTR_3g112470 35.337 549 332 9 39 585 26 553 7.03e-116 357
MS.gene51032.t1 MTR_3g112460 34.791 549 335 9 39 585 26 553 2.35e-115 355
MS.gene51032.t1 MTR_1g057460 34.642 586 343 11 3 581 12 564 1.93e-113 350
MS.gene51032.t1 MTR_7g088820 35.409 514 315 9 77 584 4 506 1.55e-112 347
MS.gene51032.t1 MTR_5g012270 35.209 551 344 7 39 585 32 573 1.83e-112 348
MS.gene51032.t1 MTR_3g462710 37.259 467 280 5 125 589 4 459 1.92e-110 339
MS.gene51032.t1 MTR_4g019580 33.504 585 356 10 18 585 2 570 4.79e-110 342
MS.gene51032.t1 MTR_7g098200 33.220 587 357 10 14 590 2 563 2.93e-109 340
MS.gene51032.t1 MTR_5g014150 32.765 586 378 9 3 582 11 586 6.17e-109 340
MS.gene51032.t1 MTR_7g098200 32.712 590 366 10 14 590 2 573 9.69e-109 339
MS.gene51032.t1 MTR_7g098160 33.393 560 353 8 40 594 37 581 7.38e-106 332
MS.gene51032.t1 MTR_3g069500 33.276 586 360 10 3 584 2 560 1.30e-105 330
MS.gene51032.t1 MTR_3g069420 34.549 576 348 9 25 584 7 569 1.03e-104 328
MS.gene51032.t1 MTR_5g085850 33.913 575 342 7 23 584 7 556 1.42e-104 328
MS.gene51032.t1 MTR_5g012290 33.152 552 354 6 39 585 30 571 3.59e-104 327
MS.gene51032.t1 MTR_7g065080 32.594 586 351 10 15 584 1 558 2.51e-103 324
MS.gene51032.t1 MTR_1g057460 35.509 521 305 10 64 581 1 493 3.69e-103 321
MS.gene51032.t1 MTR_7g098040 31.261 595 375 10 12 590 2 578 5.77e-103 325
MS.gene51032.t1 MTR_0236s0050 36.084 521 302 10 64 581 1 493 3.28e-102 319
MS.gene51032.t1 MTR_3g069440 33.577 548 345 8 40 584 37 568 3.65e-102 322
MS.gene51032.t1 MTR_0294s0020 34.854 548 323 10 40 585 35 550 5.47e-102 320
MS.gene51032.t1 MTR_7g098090 32.280 601 374 10 12 594 1 586 1.33e-101 321
MS.gene51032.t1 MTR_3g014790 33.733 584 335 10 16 585 3 548 3.99e-101 318
MS.gene51032.t1 MTR_3g072300 34.120 551 348 9 40 588 28 565 6.93e-101 318
MS.gene51032.t1 MTR_7g088820 35.394 469 286 9 122 584 1 458 1.08e-100 314
MS.gene51032.t1 MTR_3g005010 33.696 552 321 10 39 585 33 544 2.29e-100 315
MS.gene51032.t1 MTR_4g033315 35.584 548 321 10 40 585 35 552 8.96e-100 314
MS.gene51032.t1 MTR_4g033310 35.584 548 321 10 40 585 35 552 8.96e-100 314
MS.gene51032.t1 MTR_1g116930 32.865 569 362 7 17 582 4 555 1.24e-99 315
MS.gene51032.t1 MTR_4g101380 34.483 551 351 6 39 585 30 574 1.53e-99 315
MS.gene51032.t1 MTR_1g042310 32.762 583 366 11 18 590 4 570 3.09e-99 314
MS.gene51032.t1 MTR_1g041835 33.996 553 350 7 40 590 31 570 7.55e-99 313
MS.gene51032.t1 MTR_4g114340 35.986 553 331 11 39 586 27 561 8.57e-99 312
MS.gene51032.t1 MTR_7g006540 34.215 567 332 13 39 584 66 612 1.85e-98 313
MS.gene51032.t1 MTR_7g098230 32.079 558 345 9 45 590 35 570 2.03e-98 312
MS.gene51032.t1 MTR_4g033325 36.066 549 315 11 40 585 35 550 2.26e-98 311
MS.gene51032.t1 MTR_7g005930 30.623 578 384 6 21 596 18 580 1.14e-97 310
MS.gene51032.t1 MTR_7g010820 32.143 560 371 6 28 583 16 570 2.45e-96 306
MS.gene51032.t1 MTR_1g075440 32.101 595 369 10 7 590 2 572 2.47e-96 306
MS.gene51032.t1 MTR_4g033330 34.559 544 320 10 28 566 21 533 6.38e-96 303
MS.gene51032.t1 MTR_4g098800 31.193 545 362 4 40 582 40 573 6.82e-96 305
MS.gene51032.t1 MTR_2g093640 34.828 580 333 10 18 585 2 548 1.83e-95 303
MS.gene51032.t1 MTR_1g042310 33.333 546 342 10 51 590 4 533 4.02e-95 302
MS.gene51032.t1 MTR_4g098800 31.193 545 362 4 40 582 105 638 4.27e-95 305
MS.gene51032.t1 MTR_7g098220 32.428 552 351 7 40 585 34 569 4.50e-95 303
MS.gene51032.t1 MTR_1g085090 33.155 561 347 10 39 595 22 558 8.24e-94 300
MS.gene51032.t1 MTR_8g038880 33.514 555 335 8 39 585 23 551 1.28e-93 299
MS.gene51032.t1 MTR_1g041815 33.153 555 352 8 40 590 31 570 2.92e-93 298
MS.gene51032.t1 MTR_1g042310 33.271 538 337 10 59 590 5 526 7.92e-93 296
MS.gene51032.t1 MTR_7g013270 30.986 568 362 10 25 582 77 624 1.83e-92 298
MS.gene51032.t1 MTR_7g098180 29.863 586 384 8 12 585 1 571 3.80e-92 296
MS.gene51032.t1 MTR_2g093160 33.161 579 344 12 18 585 2 548 4.57e-92 294
MS.gene51032.t1 MTR_7g065080 32.998 497 300 8 95 585 3 472 6.38e-92 292
MS.gene51032.t1 MTR_7g111260 32.639 576 359 9 20 591 3 553 2.50e-90 290
MS.gene51032.t1 MTR_7g098220 32.037 540 345 7 52 585 2 525 2.61e-90 290
MS.gene51032.t1 MTR_7g098200 33.544 474 289 8 125 590 4 459 9.47e-90 286
MS.gene51032.t1 MTR_2g005130 31.729 561 346 11 37 591 41 570 9.38e-89 286
MS.gene51032.t1 MTR_4g123537 32.639 576 360 9 16 588 24 574 5.01e-88 285
MS.gene51032.t1 MTR_4g107670 30.662 574 345 9 37 584 25 571 1.24e-87 283
MS.gene51032.t1 MTR_3g100980 31.570 567 348 8 32 584 10 550 1.76e-87 283
MS.gene51032.t1 MTR_1g041875 32.200 559 348 8 39 590 32 566 2.83e-87 282
MS.gene51032.t1 MTR_2g093180 32.874 581 344 15 18 585 2 549 7.44e-87 280
MS.gene51032.t1 MTR_8g087780 33.750 560 352 9 37 584 22 574 2.15e-86 280
MS.gene51032.t1 MTR_2g017750 31.353 606 394 11 5 596 2 599 5.89e-85 277
MS.gene51032.t1 MTR_4g033375 35.366 492 287 10 40 529 36 498 3.52e-84 272
MS.gene51032.t1 MTR_4g033325 36.902 439 252 8 150 585 10 426 2.16e-83 268
MS.gene51032.t1 MTR_4g033325 36.902 439 252 8 150 585 36 452 2.91e-83 268
MS.gene51032.t1 MTR_3g100980 30.252 595 347 9 32 584 10 578 3.08e-82 270
MS.gene51032.t1 MTR_8g087810 31.786 560 364 9 37 584 22 575 1.44e-81 268
MS.gene51032.t1 MTR_1g041885 31.311 511 324 8 59 564 5 493 1.91e-81 266
MS.gene51032.t1 MTR_8g469310 29.636 550 380 5 37 584 27 571 2.73e-81 266
MS.gene51032.t1 MTR_4g033385 35.874 446 263 10 143 585 28 453 9.77e-80 259
MS.gene51032.t1 MTR_4g033395 34.888 493 288 11 40 529 36 498 2.28e-79 259
MS.gene51032.t1 MTR_5g038380 29.505 566 361 12 37 584 29 574 1.01e-75 252
MS.gene51032.t1 MTR_7g098150 30.803 461 288 8 12 456 1 446 1.81e-70 235
MS.gene51032.t1 MTR_6g008690 28.440 545 339 13 53 581 24 533 5.22e-66 225
MS.gene51032.t1 MTR_1g009170 33.088 408 213 9 161 564 7 358 2.40e-65 219
MS.gene51032.t1 MTR_7g098210 28.224 535 286 14 59 588 5 446 1.58e-57 200
MS.gene51032.t1 MTR_4g033310 37.722 281 163 4 305 585 220 488 6.41e-54 191
MS.gene51032.t1 MTR_4g033310 36.364 165 94 3 40 204 35 188 1.89e-20 95.1
MS.gene51032.t1 MTR_4g024930 26.976 582 381 12 13 582 4 553 8.06e-54 192
MS.gene51032.t1 MTR_7g051880 26.786 504 322 10 79 581 68 525 9.06e-45 167
MS.gene51032.t1 MTR_7g052600 27.183 504 320 11 79 581 68 525 6.82e-44 164
MS.gene51032.t1 MTR_7g051830 26.984 504 321 10 79 581 68 525 1.11e-42 161
MS.gene51032.t1 MTR_3g065350 34.091 176 105 2 348 523 1 165 3.30e-25 102
MS.gene51032.t1 MTR_8g091265 36.975 119 71 4 307 423 3 119 5.80e-18 81.3
MS.gene51032.t1 MTR_7g064160 42.683 82 47 0 39 120 32 113 4.99e-17 77.8
MS.gene51032.t1 MTR_4g033390 35.227 88 57 0 499 586 30 117 8.57e-15 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51032.t1 AT5G62680 62.411 564 209 3 23 584 30 592 0.0 754
MS.gene51032.t1 AT1G18880 60.417 576 222 4 20 592 2 574 0.0 748
MS.gene51032.t1 AT3G47960 60.791 556 215 3 30 584 55 608 0.0 716
MS.gene51032.t1 AT1G69870 46.528 576 289 7 13 584 34 594 0.0 531
MS.gene51032.t1 AT1G27080 44.324 555 277 9 39 584 17 548 8.63e-156 459
MS.gene51032.t1 AT1G27080 43.478 529 267 9 65 584 1 506 2.37e-142 423
MS.gene51032.t1 AT5G28470 37.818 550 319 7 39 581 20 553 1.32e-138 415
MS.gene51032.t1 AT1G52190 36.926 566 345 8 22 581 7 566 1.20e-136 411
MS.gene51032.t1 AT1G69860 39.336 572 315 8 23 585 2 550 2.17e-136 409
MS.gene51032.t1 AT5G28470 37.636 550 318 8 39 581 20 551 1.95e-135 407
MS.gene51032.t1 AT1G68570 37.372 586 353 7 21 597 1 581 1.99e-133 402
MS.gene51032.t1 AT3G54140 36.054 588 355 8 4 590 2 569 1.36e-131 397
MS.gene51032.t1 AT3G54140 36.054 588 355 8 4 590 2 569 1.36e-131 397
MS.gene51032.t1 AT3G16180 36.252 571 350 10 18 581 2 565 6.20e-131 396
MS.gene51032.t1 AT5G01180 36.348 575 345 8 21 585 1 564 4.37e-129 390
MS.gene51032.t1 AT5G01180 36.348 575 345 8 21 585 1 564 4.37e-129 390
MS.gene51032.t1 AT5G01180 36.348 575 345 8 21 585 1 564 4.37e-129 390
MS.gene51032.t1 AT1G68570 37.681 552 337 6 48 597 5 551 8.62e-128 387
MS.gene51032.t1 AT2G02040 34.648 583 370 7 7 588 13 585 1.55e-122 374
MS.gene51032.t1 AT1G62200 38.504 548 319 6 40 584 56 588 1.82e-121 372
MS.gene51032.t1 AT1G62200 36.742 577 318 7 40 584 56 617 2.65e-118 364
MS.gene51032.t1 AT1G62200 36.742 577 318 7 40 584 70 631 5.96e-118 364
MS.gene51032.t1 AT2G02020 33.559 590 326 8 12 583 1 542 1.94e-107 334
MS.gene51032.t1 AT4G21680 33.818 550 349 6 40 583 32 572 3.38e-104 327
MS.gene51032.t1 AT3G54450 33.996 553 335 10 39 585 15 543 1.28e-103 324
MS.gene51032.t1 AT3G45660 34.220 564 344 9 22 585 7 543 2.92e-103 323
MS.gene51032.t1 AT3G45660 34.220 564 344 9 22 585 7 543 2.92e-103 323
MS.gene51032.t1 AT3G45660 34.220 564 344 9 22 585 28 564 5.62e-103 323
MS.gene51032.t1 AT3G45650 34.369 547 332 9 39 585 25 544 1.07e-102 322
MS.gene51032.t1 AT2G37900 34.062 549 336 9 39 584 41 566 2.56e-102 322
MS.gene51032.t1 AT3G21670 33.507 576 352 7 18 587 11 561 3.90e-102 322
MS.gene51032.t1 AT5G13400 34.276 566 349 11 39 593 67 620 1.81e-101 321
MS.gene51032.t1 AT1G59740 33.276 577 359 10 13 580 14 573 3.17e-99 314
MS.gene51032.t1 AT3G53960 32.545 550 351 7 39 584 40 573 5.90e-99 313
MS.gene51032.t1 AT3G45680 32.566 565 355 7 21 585 5 543 6.42e-99 312
MS.gene51032.t1 AT1G12110 33.810 559 340 7 39 585 30 570 8.17e-98 310
MS.gene51032.t1 AT3G45650 32.810 573 332 10 39 585 25 570 4.98e-97 308
MS.gene51032.t1 AT3G45720 32.305 551 338 9 39 585 22 541 2.13e-96 305
MS.gene51032.t1 AT1G32450 30.479 584 383 7 15 582 6 582 7.10e-95 303
MS.gene51032.t1 AT2G26690 34.249 546 341 8 39 582 27 556 7.22e-95 302
MS.gene51032.t1 AT1G33440 32.746 568 350 10 37 596 39 582 3.22e-94 301
MS.gene51032.t1 AT5G46050 30.769 585 384 8 11 590 2 570 5.00e-94 300
MS.gene51032.t1 AT5G46040 32.258 558 357 7 40 592 31 572 1.82e-93 299
MS.gene51032.t1 AT2G37900 33.399 506 311 8 83 585 6 488 3.05e-93 295
MS.gene51032.t1 AT5G19640 29.725 619 379 12 1 594 4 591 1.26e-92 297
MS.gene51032.t1 AT2G26690 34.264 537 335 8 48 582 3 523 1.29e-92 295
MS.gene51032.t1 AT1G22550 32.578 574 356 8 18 585 12 560 5.58e-92 294
MS.gene51032.t1 AT3G45700 31.504 565 355 7 21 585 1 533 9.19e-92 293
MS.gene51032.t1 AT2G40460 32.206 562 352 9 40 595 28 566 1.22e-91 294
MS.gene51032.t1 AT3G45710 30.906 563 364 7 23 585 8 545 7.83e-91 291
MS.gene51032.t1 AT2G26690 34.156 527 329 8 58 582 1 511 5.74e-90 288
MS.gene51032.t1 AT1G72125 32.759 580 361 8 10 585 3 557 1.23e-88 285
MS.gene51032.t1 AT1G22540 33.029 548 331 8 39 581 33 549 3.83e-88 284
MS.gene51032.t1 AT1G72130 32.491 554 316 12 39 583 28 532 2.17e-87 281
MS.gene51032.t1 AT1G22570 32.578 574 357 10 18 585 12 561 2.93e-86 279
MS.gene51032.t1 AT1G27040 29.964 554 360 7 37 583 28 560 2.89e-85 277
MS.gene51032.t1 AT1G27040 29.964 554 360 7 37 583 24 556 3.13e-85 276
MS.gene51032.t1 AT1G72140 30.705 596 357 12 1 586 5 554 3.32e-85 276
MS.gene51032.t1 AT1G69850 29.680 593 395 8 12 590 1 585 2.92e-84 275
MS.gene51032.t1 AT1G27040 30.129 541 350 7 50 583 9 528 2.26e-83 271
MS.gene51032.t1 AT1G72120 31.897 580 362 10 10 585 3 553 1.08e-81 267
MS.gene51032.t1 AT1G22570 32.661 545 337 10 47 585 4 524 1.88e-81 266
MS.gene51032.t1 AT3G45690 29.806 567 322 14 23 585 6 500 4.11e-78 256
MS.gene51032.t1 AT5G46050 32.278 474 300 8 122 590 1 458 2.07e-77 253
MS.gene51032.t1 AT5G62730 29.570 558 356 9 37 585 57 586 7.95e-77 255
MS.gene51032.t1 AT5G62730 29.636 550 350 9 45 585 6 527 2.65e-76 252
MS.gene51032.t1 AT2G02020 30.169 590 325 12 12 583 1 521 6.25e-76 251
MS.gene51032.t1 AT5G14940 29.144 549 341 13 53 584 24 541 4.08e-75 249
MS.gene51032.t1 AT1G72130 32.166 457 256 10 136 583 3 414 1.50e-73 241
MS.gene51032.t1 AT1G72130 32.166 457 256 10 136 583 3 414 1.50e-73 241
MS.gene51032.t1 AT3G01350 27.568 555 348 12 53 582 24 549 4.36e-64 220
MS.gene51032.t1 AT3G25260 28.647 569 348 12 15 581 3 515 8.16e-63 216
MS.gene51032.t1 AT3G25280 27.241 569 360 15 18 581 2 521 1.62e-51 185
MS.gene51032.t1 AT5G11570 34.615 260 157 2 322 581 230 476 1.83e-47 173
MS.gene51032.t1 AT5G11570 34.667 225 140 3 35 256 12 232 1.62e-37 145
MS.gene51032.t1 AT2G38100 24.299 535 346 18 60 583 14 500 1.05e-27 117
MS.gene51032.t1 AT2G38100 24.299 535 346 18 60 583 20 506 1.36e-27 117
MS.gene51032.t1 AT2G38100 24.105 531 344 18 64 583 2 484 1.48e-27 117

Find 85 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTCTGATACATATTT+TGG 0.129529 8.2:+18331310 MS.gene51032:CDS
CCAAATCTGCTACAGGAAAT+TGG 0.223411 8.2:+18334286 MS.gene51032:CDS
CTCCCTTTATTAAGATCTTC+TGG 0.250656 8.2:-18334312 None:intergenic
CCAATTTCCTGTAGCAGATT+TGG 0.255669 8.2:-18334286 None:intergenic
CAGCCTCTGTGGATGATCTT+AGG 0.259636 8.2:-18331026 None:intergenic
TTCCTTACACATATCAATTC+AGG 0.263655 8.2:+18332398 MS.gene51032:CDS
CATTCCAAACAGGGATTACT+TGG 0.266253 8.2:+18331848 MS.gene51032:intron
TAATGTTAAGCATGACATTA+TGG 0.268892 8.2:+18333857 MS.gene51032:CDS
ATTGGTGTTGGAATATTTCT+AGG 0.270353 8.2:+18333961 MS.gene51032:CDS
TTCTCTATACTTGTACCATT+TGG 0.316202 8.2:-18334403 None:intergenic
TTACCAGAAGATCTTAATAA+AGG 0.332263 8.2:+18334309 MS.gene51032:CDS
GGATTTGGTTTACTGTTAAT+AGG 0.335496 8.2:+18331977 MS.gene51032:CDS
TTTCTTGGTTGCATTCCAAT+AGG 0.353350 8.2:-18334048 None:intergenic
CTGCTGCTACTACTACTAAT+AGG 0.356018 8.2:-18334426 None:intergenic
ACCAACTTTGCTACCTTGCT+TGG 0.356960 8.2:+18331283 MS.gene51032:CDS
TTAGCTTTAACTAAGCCTAT+TGG 0.370660 8.2:+18334033 MS.gene51032:CDS
GGCGCGATTTCGTCGATGTC+TGG 0.381630 8.2:+18334072 MS.gene51032:CDS
ATCACAGTCCTTCAAAGAAT+TGG 0.387420 8.2:+18333943 MS.gene51032:CDS
GTTCCTCAGTTGATACTAGC+TGG 0.396535 8.2:+18334105 MS.gene51032:CDS
GAATCAATAGTTTCTTCAAT+TGG 0.404560 8.2:+18332077 MS.gene51032:CDS
TTCCAACACCAATTCTTTGA+AGG 0.409566 8.2:-18333951 None:intergenic
TCAAATGTGAGCTGGGCAAT+TGG 0.416070 8.2:+18332160 MS.gene51032:CDS
AGACCATGTAACTTAGCATT+TGG 0.416324 8.2:+18332013 MS.gene51032:CDS
AAAGCCATTTGTCCTGTTGT+TGG 0.429093 8.2:-18331944 None:intergenic
AGATCTTAATAAAGGGAGAT+TGG 0.435026 8.2:+18334317 MS.gene51032:CDS
TACCAGAAGATCTTAATAAA+GGG 0.436377 8.2:+18334310 MS.gene51032:CDS
GGATCAGCTGATGAACCATC+TGG 0.441864 8.2:-18333637 None:intergenic
GTGAGCTGGGCAATTGGTCT+TGG 0.444917 8.2:+18332166 MS.gene51032:CDS
TGGAACATTAGCAAACTTGT+TGG 0.452206 8.2:+18331189 MS.gene51032:CDS
AGAACCAACAACAGGACAAA+TGG 0.467232 8.2:+18331940 MS.gene51032:CDS
AGTGGAAGAGTTGAAATGTT+TGG 0.475400 8.2:+18333684 MS.gene51032:CDS
AAGGTCATGCCTTTCATCAT+AGG 0.477830 8.2:+18331050 MS.gene51032:CDS
AAAATTGCTGAAAACCATAT+AGG 0.479481 8.2:-18333718 None:intergenic
AGTAGTAGTAGCAGCAGCAT+TGG 0.482165 8.2:+18334432 MS.gene51032:CDS
CTAAGATCATCCACAGAGGC+TGG 0.484422 8.2:+18331027 MS.gene51032:CDS
AAAACAGATTCAGGAAAGAA+AGG 0.485517 8.2:+18332055 MS.gene51032:CDS
ACAACTATTCTATCATAGAT+TGG 0.488817 8.2:-18333883 None:intergenic
CCTGAGAATATGAAAAGCAT+TGG 0.492874 8.2:+18334183 MS.gene51032:CDS
CTTTCCTTTGCACAGTGTGG+TGG 0.509167 8.2:-18331905 None:intergenic
CTTCAATCAAATAGACGAAT+GGG 0.509746 8.2:+18333790 MS.gene51032:CDS
TACCTGAATTGATATGTGTA+AGG 0.513650 8.2:-18332400 None:intergenic
GTCCTTCAAAGAATTGGTGT+TGG 0.515088 8.2:+18333949 MS.gene51032:CDS
ACCAAGCAAGGTAGCAAAGT+TGG 0.519987 8.2:-18331284 None:intergenic
ATTGGAATGCAACCAAGAAA+AGG 0.521618 8.2:+18334051 MS.gene51032:CDS
ACAACTTCCAAATCTGCTAC+AGG 0.522592 8.2:+18334279 MS.gene51032:CDS
ATATACAATCAAATGTGAGC+TGG 0.522986 8.2:+18332152 MS.gene51032:CDS
GAGAATATGAAAAGCATTGG+AGG 0.523033 8.2:+18334186 MS.gene51032:CDS
ACATGCAAAGAACCAACAAC+AGG 0.523772 8.2:+18331932 MS.gene51032:CDS
GCTATTAACATCAAAGCAGC+AGG 0.526773 8.2:-18332193 None:intergenic
TTACTGTTAATAGGTGCTGC+AGG 0.527961 8.2:+18331986 MS.gene51032:CDS
CAAGTTTGCTAATGTTCCAA+TGG 0.533736 8.2:-18331185 None:intergenic
TATACAATCAAATGTGAGCT+GGG 0.543295 8.2:+18332153 MS.gene51032:CDS
GAAAGCATTGGATGCTGAGA+AGG 0.544284 8.2:-18332334 None:intergenic
TCGGTGAATCTTCGGAGCAA+AGG 0.545760 8.2:-18333907 None:intergenic
ATGGTTCATCAGCTGATCCA+TGG 0.546248 8.2:+18333641 MS.gene51032:CDS
CTAGTGATGGGACTACCACT+TGG 0.547626 8.2:-18332262 None:intergenic
TGTTGTTGGTTCTTTGCATG+TGG 0.552280 8.2:-18331930 None:intergenic
TGCACCAGGTATCTTGAAGT+TGG 0.552408 8.2:-18333818 None:intergenic
ACTTCAATCAAATAGACGAA+TGG 0.564079 8.2:+18333789 MS.gene51032:CDS
TACCATTTGTGCAAAAGTGA+AGG 0.567355 8.2:-18332110 None:intergenic
AAGCTTTGAATTAATAGACA+TGG 0.568737 8.2:-18332377 None:intergenic
GGAGAAAGAGAGACAGAAGA+AGG 0.569451 8.2:+18330933 MS.gene51032:CDS
ACACCAAATGCTAAGTTACA+TGG 0.574582 8.2:-18332016 None:intergenic
AGAGAAGAAAGCACCAAGCA+AGG 0.574955 8.2:-18331296 None:intergenic
GTTGCTGAACAATAACTAGA+TGG 0.575128 8.2:-18333744 None:intergenic
TAATCAAAGAGTGAAAGCAT+TGG 0.577528 8.2:-18332346 None:intergenic
GATCATCCACAGAGGCTGGA+AGG 0.582360 8.2:+18331031 MS.gene51032:CDS
AACACCAACTTCAAGATACC+TGG 0.590112 8.2:+18333814 MS.gene51032:CDS
CATTAATTACCTATGATGAA+AGG 0.593430 8.2:-18331059 None:intergenic
AGCTTTGAATTAATAGACAT+GGG 0.599389 8.2:-18332376 None:intergenic
GCATGACCTTCCAGCCTCTG+TGG 0.600147 8.2:-18331037 None:intergenic
TCTTTGCAGCATACAACAAG+TGG 0.605971 8.2:+18333666 MS.gene51032:CDS
AACATCATCAATATCTTCAG+TGG 0.606716 8.2:+18331256 MS.gene51032:CDS
TATGTAAAAGTTAAACCAAG+TGG 0.609163 8.2:+18332247 MS.gene51032:CDS
TGTATGCTGCAAAGACTCCA+TGG 0.610232 8.2:-18333658 None:intergenic
GCACTTTCCTTTGCACAGTG+TGG 0.621780 8.2:-18331908 None:intergenic
TAACATTAAGAAGACAGTGT+AGG 0.625125 8.2:-18333842 None:intergenic
TCATCCACCACACTGTGCAA+AGG 0.625702 8.2:+18331901 MS.gene51032:CDS
CAAGACAAAATAAATCCAGA+TGG 0.635882 8.2:+18333622 MS.gene51032:CDS
AGAATATGAAAAGCATTGGA+GGG 0.646435 8.2:+18334187 MS.gene51032:CDS
AAGACAGTGTAGGATGCACC+AGG 0.652597 8.2:-18333832 None:intergenic
TTTGAATTAATAGACATGGG+TGG 0.673189 8.2:-18332373 None:intergenic
AATTGAGAAAGAAAACAACA+TGG 0.708030 8.2:+18330971 MS.gene51032:CDS
AATCCAGCTAGTATCAACTG+AGG 0.717630 8.2:-18334108 None:intergenic
GAACCTAAGATCATCCACAG+AGG 0.792669 8.2:+18331023 MS.gene51032:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACTATTAGATAAAAATA+GGG + chr8.2:18333570-18333589 MS.gene51032:intron 10.0%
!! AATTTAATATCTAAACTTAA+CGG + chr8.2:18333295-18333314 MS.gene51032:intron 10.0%
!! ATAAATGAATTAAAATTTGA+TGG - chr8.2:18332433-18332452 None:intergenic 10.0%
!! GAATATTTATATGTAAAATT+AGG + chr8.2:18332900-18332919 MS.gene51032:intron 10.0%
!! TAATACTATTAGATAAAAAT+AGG + chr8.2:18333569-18333588 MS.gene51032:intron 10.0%
!!! AAATACTATAATTAATTTGT+AGG - chr8.2:18331589-18331608 None:intergenic 10.0%
!! AAACAAATAAAAAATCTACT+AGG - chr8.2:18333529-18333548 None:intergenic 15.0%
!! AAATGTAACAAATTTACAAA+AGG - chr8.2:18333198-18333217 None:intergenic 15.0%
!! AGATAATTTAAAAGATCAAT+TGG + chr8.2:18333103-18333122 MS.gene51032:intron 15.0%
!! AGATATTAAATTAAATCATC+TGG - chr8.2:18333287-18333306 None:intergenic 15.0%
!!! AAAAACTTTTCAATTAATTG+TGG + chr8.2:18331471-18331490 MS.gene51032:intron 15.0%
!!! AATATTTAGTTTTAGTCAAA+TGG - chr8.2:18331403-18331422 None:intergenic 15.0%
!!! AATGAAACTTTTGAAAAATT+AGG + chr8.2:18331160-18331179 MS.gene51032:CDS 15.0%
!!! TAAGTTTTTTTGTTTCAAAT+TGG + chr8.2:18332690-18332709 MS.gene51032:intron 15.0%
!!! TATATTTTCTTAAATCCTTA+CGG - chr8.2:18331679-18331698 None:intergenic 15.0%
!!! TTTGAAACAAAAAAACTTAA+AGG - chr8.2:18332689-18332708 None:intergenic 15.0%
!! AATTATCTCTTGTTACAAAT+TGG - chr8.2:18333091-18333110 None:intergenic 20.0%
!! ACATTAAAAAAGCAAAGTAA+CGG - chr8.2:18332489-18332508 None:intergenic 20.0%
!! ATTAGATAAAAATAGGGTAT+TGG + chr8.2:18333576-18333595 MS.gene51032:intron 20.0%
!! GTTATAATCATGTAACTTAA+AGG - chr8.2:18332658-18332677 None:intergenic 20.0%
!! TAAGAAAATATATGTTGTAC+TGG + chr8.2:18331609-18331628 MS.gene51032:intron 20.0%
!! TATCTTAAATGAACAAGATA+TGG - chr8.2:18333437-18333456 None:intergenic 20.0%
!! TGATTAAGTTTGATGAAATT+AGG - chr8.2:18332746-18332765 None:intergenic 20.0%
!! TTAATCTATGTGAAAAAATC+AGG + chr8.2:18333228-18333247 MS.gene51032:intron 20.0%
!!! AAATGTTGAGTTGAATAATT+TGG - chr8.2:18333460-18333479 None:intergenic 20.0%
!!! AACATTTTCATAAACTAGAT+TGG + chr8.2:18333473-18333492 MS.gene51032:intron 20.0%
!!! AATTTTTCATGAAACTTTCT+AGG - chr8.2:18331507-18331526 None:intergenic 20.0%
!!! ATAATTAATTTGTAGGAGTT+TGG - chr8.2:18331582-18331601 None:intergenic 20.0%
!!! ATTTTTATTACATGATTGCT+GGG + chr8.2:18334343-18334362 MS.gene51032:CDS 20.0%
!!! GTTTTAACTTTTTTCAACAT+TGG - chr8.2:18331446-18331465 None:intergenic 20.0%
!!! TATTTTTATTACATGATTGC+TGG + chr8.2:18334342-18334361 MS.gene51032:CDS 20.0%
!!! TGGTAGTGATAATTTTTTAA+AGG + chr8.2:18332614-18332633 MS.gene51032:intron 20.0%
! AAAATTGCTGAAAACCATAT+AGG - chr8.2:18333721-18333740 None:intergenic 25.0%
! AATGAACAAGATATGGAAAT+TGG - chr8.2:18333430-18333449 None:intergenic 25.0%
! AATTGAGAAAGAAAACAACA+TGG + chr8.2:18330971-18330990 MS.gene51032:CDS 25.0%
! ACAACTATTCTATCATAGAT+TGG - chr8.2:18333886-18333905 None:intergenic 25.0%
! ACTTGAAAAATACTAGTGAT+GGG - chr8.2:18332277-18332296 None:intergenic 25.0%
! CATTAAAAAAGCAAAGTAAC+GGG - chr8.2:18332488-18332507 None:intergenic 25.0%
! CATTAATTACCTATGATGAA+AGG - chr8.2:18331062-18331081 None:intergenic 25.0%
! CCATCTAACATTAAGATTAT+AGG - chr8.2:18332997-18333016 None:intergenic 25.0%
! CCTATAATCTTAATGTTAGA+TGG + chr8.2:18332994-18333013 MS.gene51032:intron 25.0%
! GAATCAATAGTTTCTTCAAT+TGG + chr8.2:18332077-18332096 MS.gene51032:CDS 25.0%
! GTTTGATGAAATTAGGATAA+TGG - chr8.2:18332739-18332758 None:intergenic 25.0%
! TAATGTTAAGCATGACATTA+TGG + chr8.2:18333857-18333876 MS.gene51032:CDS 25.0%
! TAATTACTCAAAAAGTAGAG+TGG - chr8.2:18332558-18332577 None:intergenic 25.0%
! TACCAGAAGATCTTAATAAA+GGG + chr8.2:18334310-18334329 MS.gene51032:CDS 25.0%
! TATGTAAAAGTTAAACCAAG+TGG + chr8.2:18332247-18332266 MS.gene51032:CDS 25.0%
! TGGTAACAAAAGAAACTTAA+AGG + chr8.2:18333123-18333142 MS.gene51032:intron 25.0%
! TGTATATAATATCGTCATGT+CGG + chr8.2:18331705-18331724 MS.gene51032:intron 25.0%
! TTACCAGAAGATCTTAATAA+AGG + chr8.2:18334309-18334328 MS.gene51032:CDS 25.0%
!! ACTTTTTGATGTTTTCCAAA+TGG + chr8.2:18334388-18334407 MS.gene51032:CDS 25.0%
!! TAAAGGCCAAATACTATTTT+CGG + chr8.2:18332631-18332650 MS.gene51032:intron 25.0%
!! TTCTTCTCTGATACATATTT+TGG + chr8.2:18331310-18331329 MS.gene51032:CDS 25.0%
!!! AAGCTTTGAATTAATAGACA+TGG - chr8.2:18332380-18332399 None:intergenic 25.0%
!!! AGCTTTGAATTAATAGACAT+GGG - chr8.2:18332379-18332398 None:intergenic 25.0%
!!! CTTAATCAAAAAGTGTTATG+TGG + chr8.2:18332758-18332777 MS.gene51032:intron 25.0%
!!! GCTTGAAATTTTTTATGAAC+AGG + chr8.2:18331136-18331155 MS.gene51032:intron 25.0%
!!! GTTACTTTGCTTTTTTAATG+TGG + chr8.2:18332488-18332507 MS.gene51032:intron 25.0%
!!! GTTTGGTGTTTCATAAAATT+TGG - chr8.2:18331565-18331584 None:intergenic 25.0%
!!! TAGTATTTTTCAAGTCTTAG+TGG + chr8.2:18332282-18332301 MS.gene51032:CDS 25.0%
AAAACAGATTCAGGAAAGAA+AGG + chr8.2:18332055-18332074 MS.gene51032:CDS 30.0%
AAAGGACCGAAAATAGTATT+TGG - chr8.2:18332640-18332659 None:intergenic 30.0%
AACATCATCAATATCTTCAG+TGG + chr8.2:18331256-18331275 MS.gene51032:CDS 30.0%
ACAAAAAACTAATGTGATGG+AGG + chr8.2:18333400-18333419 MS.gene51032:intron 30.0%
ACTTCAATCAAATAGACGAA+TGG + chr8.2:18333789-18333808 MS.gene51032:CDS 30.0%
AGATCTTAATAAAGGGAGAT+TGG + chr8.2:18334317-18334336 MS.gene51032:CDS 30.0%
ATATACAATCAAATGTGAGC+TGG + chr8.2:18332152-18332171 MS.gene51032:CDS 30.0%
CAAGACAAAATAAATCCAGA+TGG + chr8.2:18333622-18333641 MS.gene51032:CDS 30.0%
CATTTATCACTAGTAACAGT+TGG + chr8.2:18332594-18332613 MS.gene51032:intron 30.0%
CTTCAATCAAATAGACGAAT+GGG + chr8.2:18333790-18333809 MS.gene51032:CDS 30.0%
GACACAAAAAACTAATGTGA+TGG + chr8.2:18333397-18333416 MS.gene51032:intron 30.0%
GACTTGAAAAATACTAGTGA+TGG - chr8.2:18332278-18332297 None:intergenic 30.0%
GCAAGGAAGAAGATTTAAAA+GGG - chr8.2:18331829-18331848 None:intergenic 30.0%
GTGGATGTTTAATGTTAAGT+TGG + chr8.2:18332777-18332796 MS.gene51032:intron 30.0%
TAACATTAAGAAGACAGTGT+AGG - chr8.2:18333845-18333864 None:intergenic 30.0%
TACCTGAATTGATATGTGTA+AGG - chr8.2:18332403-18332422 None:intergenic 30.0%
TATACAATCAAATGTGAGCT+GGG + chr8.2:18332153-18332172 MS.gene51032:CDS 30.0%
TGCAAGGAAGAAGATTTAAA+AGG - chr8.2:18331830-18331849 None:intergenic 30.0%
TTCAATCCAAAAACAGATTC+AGG + chr8.2:18332046-18332065 MS.gene51032:CDS 30.0%
TTCCTTACACATATCAATTC+AGG + chr8.2:18332398-18332417 MS.gene51032:CDS 30.0%
TTCTCTATACTTGTACCATT+TGG - chr8.2:18334406-18334425 None:intergenic 30.0%
TTTGAAAAATTAGGAGCCAT+TGG + chr8.2:18331169-18331188 MS.gene51032:CDS 30.0%
TTTGAATTAATAGACATGGG+TGG - chr8.2:18332376-18332395 None:intergenic 30.0%
! AGTGGACACATTTAATTTAG+AGG - chr8.2:18332540-18332559 None:intergenic 30.0%
! ATGGATGGAGTACAATTTTA+TGG - chr8.2:18332457-18332476 None:intergenic 30.0%
! ATTGTACTCCATCCATTTTA+AGG + chr8.2:18332461-18332480 MS.gene51032:intron 30.0%
! CAAATGGCTTTTCTAATATC+AGG + chr8.2:18331956-18331975 MS.gene51032:CDS 30.0%
! GCTTTTCTAATATCAGGATT+TGG + chr8.2:18331962-18331981 MS.gene51032:CDS 30.0%
! GGATTTGGTTTACTGTTAAT+AGG + chr8.2:18331977-18331996 MS.gene51032:CDS 30.0%
! TAATCAAAGAGTGAAAGCAT+TGG - chr8.2:18332349-18332368 None:intergenic 30.0%
! TTCTTTCCTGAATCTGTTTT+TGG - chr8.2:18332055-18332074 None:intergenic 30.0%
!! AACAAAGTTTGCTGAAAAGA+TGG + chr8.2:18333033-18333052 MS.gene51032:intron 30.0%
!! AGAATATGAAAAGCATTGGA+GGG + chr8.2:18334187-18334206 MS.gene51032:CDS 30.0%
!! ATTGGTGTTGGAATATTTCT+AGG + chr8.2:18333961-18333980 MS.gene51032:CDS 30.0%
!! TTAGCTTTAACTAAGCCTAT+TGG + chr8.2:18334033-18334052 MS.gene51032:CDS 30.0%
!!! AGCATGTGTGTTATTTTTCA+TGG + chr8.2:18332213-18332232 MS.gene51032:CDS 30.0%
!!! GCATGTGTGTTATTTTTCAT+GGG + chr8.2:18332214-18332233 MS.gene51032:CDS 30.0%
ACACCAAATGCTAAGTTACA+TGG - chr8.2:18332019-18332038 None:intergenic 35.0%
AGACCATGTAACTTAGCATT+TGG + chr8.2:18332013-18332032 MS.gene51032:CDS 35.0%
AGTGGAAGAGTTGAAATGTT+TGG + chr8.2:18333684-18333703 MS.gene51032:CDS 35.0%
ATCACAGTCCTTCAAAGAAT+TGG + chr8.2:18333943-18333962 MS.gene51032:CDS 35.0%
ATTGGAATGCAACCAAGAAA+AGG + chr8.2:18334051-18334070 MS.gene51032:CDS 35.0%
CTCCCTTTATTAAGATCTTC+TGG - chr8.2:18334315-18334334 None:intergenic 35.0%
CTCTCAAAACTAAAGCTCAT+AGG + chr8.2:18332817-18332836 MS.gene51032:intron 35.0%
GTCATAAAAGTTGTCTCACA+TGG - chr8.2:18333367-18333386 None:intergenic 35.0%
GTTGCTGAACAATAACTAGA+TGG - chr8.2:18333747-18333766 None:intergenic 35.0%
TACCATTTGTGCAAAAGTGA+AGG - chr8.2:18332113-18332132 None:intergenic 35.0%
TATTCCAAGTAATCCCTGTT+TGG - chr8.2:18331855-18331874 None:intergenic 35.0%
TGGAACATTAGCAAACTTGT+TGG + chr8.2:18331189-18331208 MS.gene51032:CDS 35.0%
TTCCAACACCAATTCTTTGA+AGG - chr8.2:18333954-18333973 None:intergenic 35.0%
TTTCTTGGTTGCATTCCAAT+AGG - chr8.2:18334051-18334070 None:intergenic 35.0%
TTTGCTGAAAAGATGGATGA+CGG + chr8.2:18333040-18333059 MS.gene51032:intron 35.0%
! AAAGTAACGGGACCTTAAAA+TGG - chr8.2:18332476-18332495 None:intergenic 35.0%
! AAGCTCATAGGTGTGTTATT+CGG + chr8.2:18332829-18332848 MS.gene51032:intron 35.0%
! CCAATGCTTTTCATATTCTC+AGG - chr8.2:18334186-18334205 None:intergenic 35.0%
! CCTGAGAATATGAAAAGCAT+TGG + chr8.2:18334183-18334202 MS.gene51032:CDS 35.0%
! TGGTGAGAGTTTTACCTATA+TGG + chr8.2:18333704-18333723 MS.gene51032:CDS 35.0%
! TTGCAGCTGTAATGTTTTTC+AGG - chr8.2:18331237-18331256 None:intergenic 35.0%
!! CAAGTTTGCTAATGTTCCAA+TGG - chr8.2:18331188-18331207 None:intergenic 35.0%
!! GAGAATATGAAAAGCATTGG+AGG + chr8.2:18334186-18334205 MS.gene51032:CDS 35.0%
!! TACCTTCACTTTTGCACAAA+TGG + chr8.2:18332108-18332127 MS.gene51032:CDS 35.0%
!!! CTTCTTTTTCGGTGAATCTT+CGG - chr8.2:18333918-18333937 None:intergenic 35.0%
!!! TGTGTGTTATTTTTCATGGG+AGG + chr8.2:18332217-18332236 MS.gene51032:CDS 35.0%
AAAGCCATTTGTCCTGTTGT+TGG - chr8.2:18331947-18331966 None:intergenic 40.0%
AACACCAACTTCAAGATACC+TGG + chr8.2:18333814-18333833 MS.gene51032:CDS 40.0%
AAGGTCATGCCTTTCATCAT+AGG + chr8.2:18331050-18331069 MS.gene51032:CDS 40.0%
AATCCAGCTAGTATCAACTG+AGG - chr8.2:18334111-18334130 None:intergenic 40.0%
ACAACTTCCAAATCTGCTAC+AGG + chr8.2:18334279-18334298 MS.gene51032:CDS 40.0%
ACATGCAAAGAACCAACAAC+AGG + chr8.2:18331932-18331951 MS.gene51032:CDS 40.0%
AGAACCAACAACAGGACAAA+TGG + chr8.2:18331940-18331959 MS.gene51032:CDS 40.0%
AGATTCACCGAAAAAGAAGG+CGG + chr8.2:18333919-18333938 MS.gene51032:CDS 40.0%
ATAACTTAAAGAGCCACGAG+AGG + chr8.2:18333165-18333184 MS.gene51032:intron 40.0%
CATTCCAAACAGGGATTACT+TGG + chr8.2:18331848-18331867 MS.gene51032:intron 40.0%
CCAAATCTGCTACAGGAAAT+TGG + chr8.2:18334286-18334305 MS.gene51032:CDS 40.0%
CCAATTTCCTGTAGCAGATT+TGG - chr8.2:18334289-18334308 None:intergenic 40.0%
CGAAGATTCACCGAAAAAGA+AGG + chr8.2:18333916-18333935 MS.gene51032:CDS 40.0%
CTGCTGCTACTACTACTAAT+AGG - chr8.2:18334429-18334448 None:intergenic 40.0%
GCTATTAACATCAAAGCAGC+AGG - chr8.2:18332196-18332215 None:intergenic 40.0%
GTCCTTCAAAGAATTGGTGT+TGG + chr8.2:18333949-18333968 MS.gene51032:CDS 40.0%
TAACGGGACCTTAAAATGGA+TGG - chr8.2:18332472-18332491 None:intergenic 40.0%
TCTTCCTTGCATTCCAAACA+GGG + chr8.2:18331839-18331858 MS.gene51032:intron 40.0%
TCTTTGCAGCATACAACAAG+TGG + chr8.2:18333666-18333685 MS.gene51032:CDS 40.0%
TGCTACATAGTGTATGTGTC+TGG + chr8.2:18331760-18331779 MS.gene51032:intron 40.0%
TTCTTCCTTGCATTCCAAAC+AGG + chr8.2:18331838-18331857 MS.gene51032:intron 40.0%
! ACACCTTTAATCTGAAGCGT+TGG + chr8.2:18331737-18331756 MS.gene51032:intron 40.0%
! CTGCACAATCACTTCTTTTC+TGG + chr8.2:18331354-18331373 MS.gene51032:CDS 40.0%
! CTTCAGATTAAAGGTGTGTC+TGG - chr8.2:18331734-18331753 None:intergenic 40.0%
! GCTGAAACTTTTACTGCTGT+TGG + chr8.2:18334132-18334151 MS.gene51032:CDS 40.0%
! TAATCCCTGTTTGGAATGCA+AGG - chr8.2:18331846-18331865 None:intergenic 40.0%
! TTACTGTTAATAGGTGCTGC+AGG + chr8.2:18331986-18332005 MS.gene51032:CDS 40.0%
!! TATATGTTGTACTGGCTTGC+TGG + chr8.2:18331617-18331636 MS.gene51032:intron 40.0%
!! TGTTGTTGGTTCTTTGCATG+TGG - chr8.2:18331933-18331952 None:intergenic 40.0%
!!! GTCACTTTTCTATTGTGGCA+TGG + chr8.2:18334209-18334228 MS.gene51032:CDS 40.0%
!!! TTTCGTCGATGTCTGGTTTT+TGG + chr8.2:18334079-18334098 MS.gene51032:CDS 40.0%
AAAAGGCCAAATACCTCTCG+TGG - chr8.2:18333181-18333200 None:intergenic 45.0%
ACCAACTTTGCTACCTTGCT+TGG + chr8.2:18331283-18331302 MS.gene51032:CDS 45.0%
ACCAAGCAAGGTAGCAAAGT+TGG - chr8.2:18331287-18331306 None:intergenic 45.0%
AGTAGTAGTAGCAGCAGCAT+TGG + chr8.2:18334432-18334451 MS.gene51032:CDS 45.0%
ATGGTTCATCAGCTGATCCA+TGG + chr8.2:18333641-18333660 MS.gene51032:CDS 45.0%
CGACTAGGGTTGAATTTCAG+TGG - chr8.2:18331649-18331668 None:intergenic 45.0%
CTTACGGATCAAAGCGACTA+GGG - chr8.2:18331663-18331682 None:intergenic 45.0%
GAACCTAAGATCATCCACAG+AGG + chr8.2:18331023-18331042 MS.gene51032:CDS 45.0%
GCACCAACGCTTCAGATTAA+AGG - chr8.2:18331743-18331762 None:intergenic 45.0%
GGAGAAAGAGAGACAGAAGA+AGG + chr8.2:18330933-18330952 MS.gene51032:CDS 45.0%
TCAAATGTGAGCTGGGCAAT+TGG + chr8.2:18332160-18332179 MS.gene51032:CDS 45.0%
TGCACCAGGTATCTTGAAGT+TGG - chr8.2:18333821-18333840 None:intergenic 45.0%
TGTATGCTGCAAAGACTCCA+TGG - chr8.2:18333661-18333680 None:intergenic 45.0%
! CTTTTCTATTGTGGCATGGC+AGG + chr8.2:18334213-18334232 MS.gene51032:CDS 45.0%
! GTTCCTCAGTTGATACTAGC+TGG + chr8.2:18334105-18334124 MS.gene51032:CDS 45.0%
! TGTGATGCCGCCTTCTTTTT+CGG - chr8.2:18333929-18333948 None:intergenic 45.0%
!! AAAGAGCCACGAGAGGTATT+TGG + chr8.2:18333172-18333191 MS.gene51032:intron 45.0%
!! AGAGAAGAAAGCACCAAGCA+AGG - chr8.2:18331299-18331318 None:intergenic 45.0%
!! GAAAGCATTGGATGCTGAGA+AGG - chr8.2:18332337-18332356 None:intergenic 45.0%
!!! GGAGGGTCACTTTTCTATTG+TGG + chr8.2:18334204-18334223 MS.gene51032:CDS 45.0%
!!! GTCGATGTCTGGTTTTTGGT+TGG + chr8.2:18334083-18334102 MS.gene51032:CDS 45.0%
!!! AATATTTTAAATCAAATAAT+CGG - chr8.2:18332873-18332892 None:intergenic 5.0%
AAGACAGTGTAGGATGCACC+AGG - chr8.2:18333835-18333854 None:intergenic 50.0%
CAGCCTCTGTGGATGATCTT+AGG - chr8.2:18331029-18331048 None:intergenic 50.0%
CCTTACGGATCAAAGCGACT+AGG - chr8.2:18331664-18331683 None:intergenic 50.0%
CTAAGATCATCCACAGAGGC+TGG + chr8.2:18331027-18331046 MS.gene51032:CDS 50.0%
CTTTCCTTTGCACAGTGTGG+TGG - chr8.2:18331908-18331927 None:intergenic 50.0%
GCACTTTCCTTTGCACAGTG+TGG - chr8.2:18331911-18331930 None:intergenic 50.0%
GGATCAGCTGATGAACCATC+TGG - chr8.2:18333640-18333659 None:intergenic 50.0%
TCATCCACCACACTGTGCAA+AGG + chr8.2:18331901-18331920 MS.gene51032:CDS 50.0%
TCGGTGAATCTTCGGAGCAA+AGG - chr8.2:18333910-18333929 None:intergenic 50.0%
! CCTAGTCGCTTTGATCCGTA+AGG + chr8.2:18331661-18331680 MS.gene51032:intron 50.0%
! CTAGTGATGGGACTACCACT+TGG - chr8.2:18332265-18332284 None:intergenic 50.0%
! GACGAAATCGCGCCTTTTCT+TGG - chr8.2:18334066-18334085 None:intergenic 50.0%
GATCATCCACAGAGGCTGGA+AGG + chr8.2:18331031-18331050 MS.gene51032:CDS 55.0%
! GTGAGCTGGGCAATTGGTCT+TGG + chr8.2:18332166-18332185 MS.gene51032:CDS 55.0%
GCATGACCTTCCAGCCTCTG+TGG - chr8.2:18331040-18331059 None:intergenic 60.0%
GGCGCGATTTCGTCGATGTC+TGG + chr8.2:18334072-18334091 MS.gene51032:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 18330930 18334464 18330930 ID=MS.gene51032
chr8.2 mRNA 18330930 18334464 18330930 ID=MS.gene51032.t1;Parent=MS.gene51032
chr8.2 exon 18330930 18331071 18330930 ID=MS.gene51032.t1.exon1;Parent=MS.gene51032.t1
chr8.2 CDS 18330930 18331071 18330930 ID=cds.MS.gene51032.t1;Parent=MS.gene51032.t1
chr8.2 exon 18331158 18331375 18331158 ID=MS.gene51032.t1.exon2;Parent=MS.gene51032.t1
chr8.2 CDS 18331158 18331375 18331158 ID=cds.MS.gene51032.t1;Parent=MS.gene51032.t1
chr8.2 exon 18331860 18332419 18331860 ID=MS.gene51032.t1.exon3;Parent=MS.gene51032.t1
chr8.2 CDS 18331860 18332419 18331860 ID=cds.MS.gene51032.t1;Parent=MS.gene51032.t1
chr8.2 exon 18333591 18334464 18333591 ID=MS.gene51032.t1.exon4;Parent=MS.gene51032.t1
chr8.2 CDS 18333591 18334464 18333591 ID=cds.MS.gene51032.t1;Parent=MS.gene51032.t1
Gene Sequence

>MS.gene51032

ATGGGAGAAAGAGAGACAGAAGAAGGAACAACAATGAAGACAATTGAGAAAGAAAACAACATGGAAAATAGTGAGAAACATGAAACAAATGATGAACCTAAGATCATCCACAGAGGCTGGAAGGTCATGCCTTTCATCATAGGTAATTAATGTACACACTATTTCTCTCTCAATTTTTCTCTATATGTTTGAGCATAATTAATTATGCTTGAAATTTTTTATGAACAGGAAATGAAACTTTTGAAAAATTAGGAGCCATTGGAACATTAGCAAACTTGTTGGTCTATCTTACAACTGTATTCAACCTGAAAAACATTACAGCTGCAAACATCATCAATATCTTCAGTGGCAGTACCAACTTTGCTACCTTGCTTGGTGCTTTCTTCTCTGATACATATTTTGGTCGCTACAATACATTAGCATTCTGCACAATCACTTCTTTTCTGGTATTATTCTAATGCTCATTGAAACCATTTGACTAAAACTAAATATTTATTAAGAAAAATAGTCAGTCCAATGTTGAAAAAAGTTAAAACAATCTAAAAACTTTTCAATTAATTGTGGTCAATTTTCTCCTAGAAAGTTTCATGAAAAATTATAATTATAATATTAATTTAATAGACATACTTCAGCCAAATTTTATGAAACACCAAACTCCTACAAATTAATTATAGTATTTTAAGAAAATATATGTTGTACTGGCTTGCTGGCGCGATCCACTGAAATTCAACCCTAGTCGCTTTGATCCGTAAGGATTTAAGAAAATATAAGTGATTGTATATAATATCGTCATGTCGGACACCAGACACACCTTTAATCTGAAGCGTTGGTGCTACATAGTGTATGTGTCTGGTGTTCGTATGTATGAACAGCATATTTCAAGTTATACTAATGTGCCCTTTTAAATCTTCTTCCTTGCATTCCAAACAGGGATTACTTGGAATACAACTTACAGCAGTATTCAAGAATCTTCATCCACCACACTGTGCAAAGGAAAGTGCCACATGCAAAGAACCAACAACAGGACAAATGGCTTTTCTAATATCAGGATTTGGTTTACTGTTAATAGGTGCTGCAGGAGTTAGACCATGTAACTTAGCATTTGGTGTTGATCAATTCAATCCAAAAACAGATTCAGGAAAGAAAGGAATCAATAGTTTCTTCAATTGGTATTTCTTTACCTTCACTTTTGCACAAATGGTATCTTTAACACTAATTGTGTATATACAATCAAATGTGAGCTGGGCAATTGGTCTTGGAATTCCTGCTGCTTTGATGTTAATAGCATGTGTGTTATTTTTCATGGGAGGTAAATTGTATGTAAAAGTTAAACCAAGTGGTAGTCCCATCACTAGTATTTTTCAAGTCTTAGTGGTTGCAATCAAGAAAAGAAGACTTAGTCTACCTTCTCAGCATCCAATGCTTTCACTCTTTGATTATGTGCCACCCATGTCTATTAATTCAAAGCTTCCTTACACATATCAATTCAGGTAACTACATCCATCAAATTTTAATTCATTTATTCCATAAAATTGTACTCCATCCATTTTAAGGTCCCGTTACTTTGCTTTTTTAATGTGGCATTAATTATTTTTTCTTCAATTCTACCTCTAAATTAAATGTGTCCACTCTACTTTTTGAGTAATTACTAGTGTTTCAGTATACATTTATCACTAGTAACAGTTGGTAGTGATAATTTTTTAAAGGCCAAATACTATTTTCGGTCCTTTAAGTTACATGATTATAACAAGTTAGTCCTTTAAGTTTTTTTGTTTCAAATTGGTTTTAAGTCATCAAATATTTGCACCATTATCCTAATTTCATCAAACTTAATCAAAAAGTGTTATGTGGATGTTTAATGTTAAGTTGGTTTGTTCAAATTCATTGCTCTCAAAACTAAAGCTCATAGGTGTGTTATTCGGTATTCAAAACAAAATTGACCGATTATTTGATTTAAAATATTGTTGATCGAATATTTATATGTAAAATTAGGTTTGAAATTCAAAAACAAGAAGAAGAAAATGTGTATAAGTAATCATGTTTGATGTTATAAGCACTTTTGAACCTATAATCTTAATGTTAGATGGTCTATAAGCACTTTCTAACAAAGTTTGCTGAAAAGATGGATGACGGTGTAAATATTCTATGACTTAAATGACCAATTTGTAACAAGAGATAATTTAAAAGATCAATTGGTAACAAAAGAAACTTAAAGGACTAATATATTATAAACATATAACTTAAAGAGCCACGAGAGGTATTTGGCCTTTTGTAAATTTGTTACATTTTGTATATTCTTTAATCTATGTGAAAAAATCAGGATGACAATTATTTTAAAGCGAAATAAGTAGTGACCAGATGATTTAATTTAATATCTAAACTTAACGGAATTTCAAAATAATATCTTAAATCAAAAAAAATCAATCACAATAGTCCATGTGAGACAACTTTTATGACTAAACTGATCGACACAAAAAACTAATGTGATGGAGGATTTCCAATTTCCATATCTTGTTCATTTAAGATACCAAATTATTCAACTCAACATTTTCATAAACTAGATTGGTGATTAACTACTTTTGACTTCATGCAATTTCCTAGTAGATTTTTTATTTGTTTGTTCTTAATGAAATCAATACTAATACTATTAGATAAAAATAGGGTATTGGACAAAGCTGCAATGATAACATCACAAGACAAAATAAATCCAGATGGTTCATCAGCTGATCCATGGAGTCTTTGCAGCATACAACAAGTGGAAGAGTTGAAATGTTTGGTGAGAGTTTTACCTATATGGTTTTCAGCAATTTTGTACCATCTAGTTATTGTTCAGCAACACACACTTCTTGTTTTTCAAGCACTTCAATCAAATAGACGAATGGGAAACACCAACTTCAAGATACCTGGTGCATCCTACACTGTCTTCTTAATGTTAAGCATGACATTATGGTTACCAATCTATGATAGAATAGTTGTTCCTTTGCTCCGAAGATTCACCGAAAAAGAAGGCGGCATCACAGTCCTTCAAAGAATTGGTGTTGGAATATTTCTAGGTTTACTAAGCATACTTGTATCAGCATTTGTTGAAACACAAAGAAGACACTTAGCTTTAACTAAGCCTATTGGAATGCAACCAAGAAAAGGCGCGATTTCGTCGATGTCTGGTTTTTGGTTGGTTCCTCAGTTGATACTAGCTGGATTTGCTGAAACTTTTACTGCTGTTGGACAAATTGAATTTTACTATAAACAGTTTCCTGAGAATATGAAAAGCATTGGAGGGTCACTTTTCTATTGTGGCATGGCAGGTTCTAGTTATTTAAGTGCTTTTCTTGTTTCTGTTGTTCATAGAACAACTTCCAAATCTGCTACAGGAAATTGGTTACCAGAAGATCTTAATAAAGGGAGATTGGAATATTTTTATTACATGATTGCTGGGATAGAAGTCTTGAATTTTGTGTACTTTTTGATGTTTTCCAAATGGTACAAGTATAGAGAACCTATTAGTAGTAGTAGCAGCAGCATTGGTAGTCCATGA

Protein sequence

>MS.gene51032.t1

MGERETEEGTTMKTIEKENNMENSEKHETNDEPKIIHRGWKVMPFIIGNETFEKLGAIGTLANLLVYLTTVFNLKNITAANIINIFSGSTNFATLLGAFFSDTYFGRYNTLAFCTITSFLGLLGIQLTAVFKNLHPPHCAKESATCKEPTTGQMAFLISGFGLLLIGAAGVRPCNLAFGVDQFNPKTDSGKKGINSFFNWYFFTFTFAQMVSLTLIVYIQSNVSWAIGLGIPAALMLIACVLFFMGGKLYVKVKPSGSPITSIFQVLVVAIKKRRLSLPSQHPMLSLFDYVPPMSINSKLPYTYQFRVLDKAAMITSQDKINPDGSSADPWSLCSIQQVEELKCLVRVLPIWFSAILYHLVIVQQHTLLVFQALQSNRRMGNTNFKIPGASYTVFLMLSMTLWLPIYDRIVVPLLRRFTEKEGGITVLQRIGVGIFLGLLSILVSAFVETQRRHLALTKPIGMQPRKGAISSMSGFWLVPQLILAGFAETFTAVGQIEFYYKQFPENMKSIGGSLFYCGMAGSSYLSAFLVSVVHRTTSKSATGNWLPEDLNKGRLEYFYYMIAGIEVLNFVYFLMFSKWYKYREPISSSSSSIGSP