AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34993

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34993.t1 MTR_3g462710 65.018 566 193 4 21 584 2 564 0.0 753
MS.gene34993.t1 MTR_7g067010 63.298 564 202 5 22 584 3 562 0.0 739
MS.gene34993.t1 MTR_4g015080 62.324 568 209 5 20 586 11 574 0.0 736
MS.gene34993.t1 MTR_3g462710 65.721 458 152 4 129 584 1 455 0.0 598
MS.gene34993.t1 MTR_7g098200 45.878 558 290 3 26 578 12 562 0.0 535
MS.gene34993.t1 MTR_3g112460 46.914 567 286 5 22 586 2 555 0.0 531
MS.gene34993.t1 MTR_1g075440 45.645 574 296 5 12 580 1 563 0.0 530
MS.gene34993.t1 MTR_7g098160 46.786 560 286 5 26 580 16 568 0.0 529
MS.gene34993.t1 MTR_7g098040 47.143 560 284 5 26 580 17 569 0.0 525
MS.gene34993.t1 MTR_7g098180 45.884 571 296 5 14 578 2 565 0.0 524
MS.gene34993.t1 MTR_7g098200 45.699 558 281 5 26 578 12 552 4.06e-180 521
MS.gene34993.t1 MTR_7g098090 46.903 565 283 6 26 580 16 573 2.54e-178 518
MS.gene34993.t1 MTR_1g041815 45.455 572 298 3 12 580 1 561 7.01e-178 516
MS.gene34993.t1 MTR_3g112470 45.855 567 292 5 22 586 2 555 1.13e-177 514
MS.gene34993.t1 MTR_1g041835 45.105 572 300 3 12 580 1 561 1.68e-177 514
MS.gene34993.t1 MTR_1g042310 43.694 563 309 3 21 580 4 561 1.92e-173 504
MS.gene34993.t1 MTR_7g098220 46.032 567 291 5 19 580 9 565 8.52e-173 503
MS.gene34993.t1 MTR_5g014150 44.092 567 311 4 20 581 21 586 1.07e-172 503
MS.gene34993.t1 MTR_3g112450 45.989 561 286 6 29 585 9 556 4.96e-171 498
MS.gene34993.t1 MTR_3g072300 43.310 568 315 4 21 586 2 564 2.04e-169 494
MS.gene34993.t1 MTR_7g098230 46.617 532 272 5 52 578 35 559 2.98e-169 494
MS.gene34993.t1 MTR_4g098800 43.739 567 308 4 21 582 14 574 2.78e-167 489
MS.gene34993.t1 MTR_7g010820 44.056 572 311 5 20 584 3 572 1.06e-166 487
MS.gene34993.t1 MTR_1g041875 43.438 541 291 3 26 563 12 540 1.48e-166 486
MS.gene34993.t1 MTR_4g098800 43.739 567 308 4 21 582 79 639 1.83e-166 489
MS.gene34993.t1 MTR_5g055000 42.960 554 310 5 35 584 10 561 2.96e-166 486
MS.gene34993.t1 MTR_7g005930 43.173 542 298 4 42 581 34 567 3.00e-163 478
MS.gene34993.t1 MTR_1g116930 42.463 544 301 6 41 581 21 555 1.82e-158 466
MS.gene34993.t1 MTR_5g012290 43.885 556 305 4 33 583 17 570 1.06e-157 464
MS.gene34993.t1 MTR_1g042310 43.130 524 290 3 60 580 6 524 1.93e-157 462
MS.gene34993.t1 MTR_3g069420 42.531 569 310 9 20 583 13 569 1.02e-156 462
MS.gene34993.t1 MTR_3g005010 43.206 574 287 9 20 586 5 546 2.00e-156 459
MS.gene34993.t1 MTR_7g098220 45.627 526 274 4 60 580 3 521 2.07e-156 459
MS.gene34993.t1 MTR_1g042310 42.912 522 290 3 62 580 1 517 9.75e-156 457
MS.gene34993.t1 MTR_3g069500 42.580 566 308 7 19 583 11 560 1.91e-155 458
MS.gene34993.t1 MTR_7g088825 40.669 568 328 7 21 583 2 565 1.71e-154 456
MS.gene34993.t1 MTR_5g012270 43.440 564 304 9 33 586 19 577 3.88e-154 455
MS.gene34993.t1 MTR_7g013270 42.754 552 302 6 35 581 82 624 1.55e-153 456
MS.gene34993.t1 MTR_4g033325 42.629 563 293 8 22 580 10 546 2.93e-152 449
MS.gene34993.t1 MTR_7g088820 39.085 568 328 8 13 575 6 560 2.54e-151 448
MS.gene34993.t1 MTR_7g088790 39.821 560 330 6 29 583 15 572 2.63e-151 449
MS.gene34993.t1 MTR_1g041885 42.717 508 276 3 62 566 1 496 7.34e-151 445
MS.gene34993.t1 MTR_4g101380 44.227 563 296 9 33 583 17 573 1.66e-150 446
MS.gene34993.t1 MTR_0294s0020 42.606 568 286 9 22 580 10 546 2.18e-150 444
MS.gene34993.t1 MTR_7g065080 40.830 578 322 8 12 586 1 561 2.22e-150 445
MS.gene34993.t1 MTR_3g069440 42.729 557 310 7 29 583 19 568 6.94e-149 442
MS.gene34993.t1 MTR_4g033315 41.385 563 302 7 22 580 10 548 9.43e-149 440
MS.gene34993.t1 MTR_4g033310 41.385 563 302 7 22 580 10 548 9.43e-149 440
MS.gene34993.t1 MTR_7g098150 47.788 452 224 5 26 472 16 460 3.20e-147 434
MS.gene34993.t1 MTR_4g019580 40.422 569 325 8 20 585 14 571 3.11e-146 435
MS.gene34993.t1 MTR_4g033330 42.259 549 287 9 22 565 10 533 4.18e-143 425
MS.gene34993.t1 MTR_5g085850 41.536 573 311 5 16 583 3 556 6.31e-142 424
MS.gene34993.t1 MTR_7g006540 39.116 588 330 10 18 583 31 612 1.33e-139 419
MS.gene34993.t1 MTR_8g038880 41.166 549 295 8 45 584 22 551 3.24e-138 414
MS.gene34993.t1 MTR_4g114340 41.373 568 320 5 21 584 2 560 4.04e-138 414
MS.gene34993.t1 MTR_2g017750 39.206 579 333 10 22 583 12 588 9.78e-138 414
MS.gene34993.t1 MTR_5g038060 39.209 556 318 7 41 583 29 577 1.22e-136 411
MS.gene34993.t1 MTR_7g088820 39.839 497 292 6 84 575 4 498 1.57e-136 408
MS.gene34993.t1 MTR_4g033395 42.043 509 258 10 29 528 18 498 9.87e-135 402
MS.gene34993.t1 MTR_4g033375 41.386 505 267 7 29 528 18 498 5.68e-134 400
MS.gene34993.t1 MTR_3g014790 39.646 565 311 8 29 584 5 548 7.05e-133 400
MS.gene34993.t1 MTR_7g098200 42.637 455 249 3 129 578 1 448 3.67e-132 395
MS.gene34993.t1 MTR_4g107670 37.500 584 334 9 21 585 2 573 4.05e-132 398
MS.gene34993.t1 MTR_8g087780 39.613 568 330 7 29 583 7 574 8.79e-131 395
MS.gene34993.t1 MTR_4g107580 37.230 556 330 7 42 583 23 573 2.07e-130 395
MS.gene34993.t1 MTR_8g469480 37.636 550 323 8 47 583 42 584 1.09e-129 393
MS.gene34993.t1 MTR_3g100980 37.004 554 329 5 37 583 10 550 4.72e-128 387
MS.gene34993.t1 MTR_4g107510 34.465 589 366 6 5 584 8 585 6.36e-128 388
MS.gene34993.t1 MTR_5g038380 36.788 579 350 7 16 583 1 574 2.54e-125 381
MS.gene34993.t1 MTR_8g469470 34.708 582 357 6 17 586 14 584 2.94e-124 378
MS.gene34993.t1 MTR_2g005130 38.420 557 316 8 29 580 26 560 1.66e-123 377
MS.gene34993.t1 MTR_4g107530 35.849 583 346 9 18 584 12 582 7.24e-123 375
MS.gene34993.t1 MTR_8g469310 36.268 568 339 5 30 583 13 571 1.26e-122 374
MS.gene34993.t1 MTR_8g103233 38.686 548 321 8 40 580 14 553 2.87e-122 373
MS.gene34993.t1 MTR_3g100980 35.223 582 329 6 37 583 10 578 5.86e-122 373
MS.gene34993.t1 MTR_7g088820 38.938 452 269 6 129 575 1 450 6.29e-121 366
MS.gene34993.t1 MTR_7g065080 39.673 489 276 7 101 586 2 474 8.05e-121 366
MS.gene34993.t1 MTR_4g033325 41.794 457 236 8 128 580 18 448 3.54e-120 363
MS.gene34993.t1 MTR_5g038190 35.938 576 340 9 20 583 10 568 5.30e-120 367
MS.gene34993.t1 MTR_8g087810 39.199 574 325 10 29 583 7 575 3.30e-119 365
MS.gene34993.t1 MTR_4g033325 41.995 431 229 6 154 580 9 422 1.39e-116 353
MS.gene34993.t1 MTR_4g033385 40.909 462 236 10 128 580 16 449 3.60e-116 353
MS.gene34993.t1 MTR_7g111260 34.432 546 339 7 41 583 17 546 3.11e-114 352
MS.gene34993.t1 MTR_1g085090 34.046 561 349 9 28 583 2 546 5.69e-114 352
MS.gene34993.t1 MTR_2g101650 35.883 549 336 7 41 580 22 563 9.03e-114 351
MS.gene34993.t1 MTR_4g024930 36.602 571 325 10 19 581 12 553 4.15e-113 349
MS.gene34993.t1 MTR_1g009200 37.064 545 325 7 45 580 29 564 5.42e-113 349
MS.gene34993.t1 MTR_1g026750 35.337 549 338 5 40 580 15 554 9.63e-112 345
MS.gene34993.t1 MTR_1g026740 35.741 540 338 4 45 580 19 553 1.76e-111 345
MS.gene34993.t1 MTR_4g123537 36.151 556 336 7 33 584 31 571 4.54e-111 345
MS.gene34993.t1 MTR_2g101590 36.000 550 334 9 41 580 24 565 5.32e-109 340
MS.gene34993.t1 MTR_2g101610 36.182 550 333 9 41 580 25 566 2.95e-108 338
MS.gene34993.t1 MTR_2g101640 34.974 569 354 9 20 580 2 562 5.65e-107 335
MS.gene34993.t1 MTR_4g107610 35.283 547 339 8 42 580 30 569 2.29e-105 330
MS.gene34993.t1 MTR_4g011280 35.624 553 328 14 42 580 31 569 2.59e-105 330
MS.gene34993.t1 MTR_7g064780 31.874 571 377 7 18 580 1 567 8.77e-103 323
MS.gene34993.t1 MTR_1g026770 34.301 551 340 8 45 585 17 555 3.94e-102 320
MS.gene34993.t1 MTR_1g057460 34.875 562 332 15 26 580 30 564 1.26e-101 319
MS.gene34993.t1 MTR_7g098210 35.755 523 244 9 62 578 1 437 1.34e-100 312
MS.gene34993.t1 MTR_2g101560 34.358 553 339 10 41 580 25 566 1.63e-100 318
MS.gene34993.t1 MTR_6g008690 32.857 560 323 10 48 586 12 539 9.98e-96 303
MS.gene34993.t1 MTR_1g057460 35.433 508 299 12 78 580 10 493 4.11e-95 300
MS.gene34993.t1 MTR_7g064800 33.029 548 353 8 41 578 24 567 2.01e-92 296
MS.gene34993.t1 MTR_0236s0050 35.433 508 299 12 78 580 10 493 7.73e-89 284
MS.gene34993.t1 MTR_2g093640 30.545 550 342 9 45 581 23 545 5.71e-81 265
MS.gene34993.t1 MTR_2g093160 32.110 545 340 9 45 581 23 545 2.90e-78 258
MS.gene34993.t1 MTR_2g093180 31.927 545 342 9 45 581 23 546 1.13e-77 256
MS.gene34993.t1 MTR_7g051880 31.047 554 341 8 29 580 11 525 7.29e-77 253
MS.gene34993.t1 MTR_4g033310 40.690 290 163 3 293 580 202 484 1.24e-75 249
MS.gene34993.t1 MTR_4g033310 47.619 189 90 2 22 210 10 189 1.31e-45 168
MS.gene34993.t1 MTR_7g051830 30.144 554 346 7 29 580 11 525 5.50e-74 245
MS.gene34993.t1 MTR_7g052600 30.018 563 353 8 20 580 2 525 6.57e-74 245
MS.gene34993.t1 MTR_1g009170 33.251 403 207 11 168 562 9 357 2.68e-59 202
MS.gene34993.t1 MTR_3g065350 37.423 163 96 2 352 514 1 157 1.83e-30 117
MS.gene34993.t1 MTR_4g033390 42.169 83 48 0 498 580 30 112 1.93e-19 85.1
MS.gene34993.t1 MTR_8g091265 37.069 116 69 4 313 424 3 118 1.75e-12 65.5
MS.gene34993.t1 MTR_4g124330 33.058 121 58 2 145 265 8 105 5.78e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34993.t1 AT2G02040 76.792 586 134 1 1 586 1 584 0.0 961
MS.gene34993.t1 AT1G62200 63.926 596 196 4 1 585 2 589 0.0 806
MS.gene34993.t1 AT1G62200 61.120 625 195 5 1 585 16 632 0.0 791
MS.gene34993.t1 AT1G62200 61.120 625 195 5 1 585 2 618 0.0 791
MS.gene34993.t1 AT3G54140 62.014 566 212 3 21 585 2 565 0.0 747
MS.gene34993.t1 AT3G54140 62.014 566 212 3 21 585 2 565 0.0 747
MS.gene34993.t1 AT2G02020 61.499 587 182 7 1 585 1 545 0.0 735
MS.gene34993.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene34993.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene34993.t1 AT5G01180 60.387 568 221 4 20 586 2 566 0.0 732
MS.gene34993.t1 AT2G02020 58.092 587 181 8 1 585 1 524 0.0 675
MS.gene34993.t1 AT5G46050 45.355 549 287 5 20 563 4 544 2.28e-168 491
MS.gene34993.t1 AT1G32450 42.857 574 315 8 18 581 12 582 4.49e-168 492
MS.gene34993.t1 AT1G68570 45.167 569 305 6 20 583 2 568 5.43e-165 483
MS.gene34993.t1 AT2G40460 42.301 565 313 4 21 583 2 555 2.19e-162 476
MS.gene34993.t1 AT4G21680 43.234 569 308 7 27 585 12 575 2.40e-161 474
MS.gene34993.t1 AT1G68570 46.255 534 282 5 55 583 5 538 5.02e-160 469
MS.gene34993.t1 AT5G46040 42.707 569 313 5 20 583 4 564 1.88e-159 469
MS.gene34993.t1 AT5G19640 42.123 584 313 8 5 581 17 582 6.68e-158 466
MS.gene34993.t1 AT2G26690 43.234 569 307 7 21 584 2 559 3.36e-154 455
MS.gene34993.t1 AT3G53960 41.446 567 321 6 20 583 15 573 6.73e-148 439
MS.gene34993.t1 AT1G12110 42.115 558 313 4 33 584 17 570 4.34e-147 437
MS.gene34993.t1 AT2G37900 39.062 576 335 5 15 586 8 571 2.21e-145 432
MS.gene34993.t1 AT2G26690 43.364 535 287 7 55 584 3 526 2.47e-144 428
MS.gene34993.t1 AT1G22540 41.355 561 297 7 31 584 18 553 1.74e-143 427
MS.gene34993.t1 AT3G54450 38.406 552 314 8 41 584 10 543 2.80e-142 424
MS.gene34993.t1 AT2G26690 43.321 524 281 7 66 584 2 514 9.89e-141 419
MS.gene34993.t1 AT1G72140 39.792 578 301 8 13 580 9 549 6.65e-139 415
MS.gene34993.t1 AT5G13400 39.616 573 325 7 26 583 45 611 2.42e-136 410
MS.gene34993.t1 AT1G22570 40.754 557 298 9 13 561 6 538 4.66e-133 400
MS.gene34993.t1 AT1G69870 38.225 552 328 7 40 583 48 594 6.66e-132 399
MS.gene34993.t1 AT1G59740 37.931 580 340 9 1 573 1 567 3.41e-131 396
MS.gene34993.t1 AT1G22550 38.210 581 324 7 13 584 6 560 2.30e-130 393
MS.gene34993.t1 AT1G69850 37.564 583 341 6 18 583 3 579 1.35e-129 392
MS.gene34993.t1 AT3G16180 38.919 555 323 8 37 580 16 565 9.24e-129 390
MS.gene34993.t1 AT1G27040 37.770 556 334 3 29 581 13 559 1.09e-127 387
MS.gene34993.t1 AT1G27040 37.770 556 334 3 29 581 9 555 1.17e-127 386
MS.gene34993.t1 AT5G46050 44.773 440 230 5 129 563 1 432 8.95e-127 381
MS.gene34993.t1 AT3G21670 39.046 566 315 7 29 583 12 558 3.96e-126 383
MS.gene34993.t1 AT1G72125 40.214 562 307 11 31 584 17 557 6.82e-126 382
MS.gene34993.t1 AT1G72130 38.779 557 290 10 40 586 21 536 8.47e-126 380
MS.gene34993.t1 AT2G37900 38.569 503 295 4 86 586 2 492 2.66e-125 378
MS.gene34993.t1 AT1G22570 41.085 516 278 7 54 561 4 501 1.51e-124 377
MS.gene34993.t1 AT1G52190 36.347 553 334 7 41 580 19 566 1.61e-123 377
MS.gene34993.t1 AT1G27040 38.447 528 313 3 57 581 9 527 8.05e-123 373
MS.gene34993.t1 AT1G33440 37.435 577 332 9 6 573 4 560 1.05e-121 372
MS.gene34993.t1 AT1G72120 38.721 563 310 10 31 584 17 553 3.98e-120 367
MS.gene34993.t1 AT1G18880 35.385 585 338 12 14 583 7 566 1.33e-119 366
MS.gene34993.t1 AT1G27080 35.702 563 335 10 35 586 5 551 4.75e-111 344
MS.gene34993.t1 AT5G62730 33.625 571 348 7 20 580 33 582 7.93e-109 338
MS.gene34993.t1 AT5G62680 33.893 596 371 11 6 583 2 592 1.26e-108 339
MS.gene34993.t1 AT5G14940 33.868 561 329 10 41 583 5 541 1.85e-104 326
MS.gene34993.t1 AT3G47960 34.672 548 343 9 47 583 65 608 1.74e-103 326
MS.gene34993.t1 AT5G28470 31.760 551 361 7 37 580 11 553 2.59e-103 323
MS.gene34993.t1 AT5G62730 33.579 542 329 7 49 580 3 523 6.90e-102 318
MS.gene34993.t1 AT5G28470 31.579 551 360 8 37 580 11 551 2.27e-100 316
MS.gene34993.t1 AT1G27080 35.564 523 311 9 74 586 3 509 1.05e-99 313
MS.gene34993.t1 AT1G69860 34.159 565 348 8 28 586 6 552 8.66e-99 311
MS.gene34993.t1 AT1G72130 38.584 438 227 8 158 586 14 418 6.14e-98 305
MS.gene34993.t1 AT1G72130 38.584 438 227 8 158 586 14 418 6.14e-98 305
MS.gene34993.t1 AT3G01350 31.095 566 347 10 40 581 3 549 1.50e-90 290
MS.gene34993.t1 AT3G25260 31.818 550 328 12 33 580 11 515 2.10e-88 283
MS.gene34993.t1 AT3G45650 29.893 562 367 8 27 584 6 544 1.24e-86 280
MS.gene34993.t1 AT3G45680 30.298 571 360 12 23 584 2 543 8.78e-86 278
MS.gene34993.t1 AT3G45660 30.783 549 349 10 42 584 20 543 4.94e-83 270
MS.gene34993.t1 AT3G45660 30.783 549 349 10 42 584 20 543 4.94e-83 270
MS.gene34993.t1 AT3G45660 30.783 549 349 10 42 584 41 564 8.22e-83 270
MS.gene34993.t1 AT3G45650 28.741 588 366 9 27 584 6 570 1.32e-81 267
MS.gene34993.t1 AT3G25280 30.741 553 336 10 33 580 11 521 9.60e-81 263
MS.gene34993.t1 AT3G45710 28.261 552 361 11 42 584 20 545 6.89e-77 254
MS.gene34993.t1 AT3G45720 29.390 541 349 11 51 584 27 541 7.39e-77 254
MS.gene34993.t1 AT3G45700 27.717 552 351 11 45 584 18 533 4.13e-72 241
MS.gene34993.t1 AT3G45690 27.022 544 328 12 45 582 20 500 6.03e-63 216
MS.gene34993.t1 AT2G38100 28.407 521 324 13 71 580 2 484 6.13e-48 175
MS.gene34993.t1 AT2G38100 28.407 521 324 13 71 580 18 500 1.94e-47 174
MS.gene34993.t1 AT2G38100 28.407 521 324 13 71 580 24 506 2.77e-47 174
MS.gene34993.t1 AT5G11570 38.462 260 148 5 325 582 229 478 1.31e-43 162
MS.gene34993.t1 AT5G11570 30.225 311 197 9 29 331 2 300 2.29e-34 136

Find 144 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCATGTGTGTCCTCTTT+TGG 0.164173 4.4:-18320067 MS.gene34993:CDS
TGGCATTCCTGCTTTATTTA+TGG 0.166418 4.4:-18319894 MS.gene34993:CDS
GATGGCTCGGTTGACTTTAA+AGG 0.177826 4.4:-18321081 MS.gene34993:CDS
AATCCCTCAGTATTTCTTAT+TGG 0.209801 4.4:-18317724 MS.gene34993:CDS
GGCATTCCTGCTTTATTTAT+GGG 0.249270 4.4:-18319893 MS.gene34993:CDS
GGAAGAAGCTCTTGTTGTTC+AGG 0.262904 4.4:-18322234 MS.gene34993:intron
GAAGTAAATCATGGAGAAAA+TGG 0.277360 4.4:+18320731 None:intergenic
ATCCCTCAGTATTTCTTATT+GGG 0.278225 4.4:-18317723 MS.gene34993:CDS
CAGTTCTAGCAGATTCTTAC+TGG 0.283591 4.4:-18320773 MS.gene34993:CDS
CCAATTGCAAGGAAATTTAC+TGG 0.288958 4.4:-18317912 MS.gene34993:CDS
TGCACAAGATAGAAATAAAA+AGG 0.309689 4.4:+18317847 None:intergenic
GCAGGCTGGGGTCTTGGATT+TGG 0.311710 4.4:-18319914 MS.gene34993:CDS
AAAGGCTTACCTAGGATAAA+TGG 0.313106 4.4:+18321015 None:intergenic
CCAGTAAATTTCCTTGCAAT+TGG 0.315468 4.4:+18317912 None:intergenic
TGACCTCCATTCAAATTATC+TGG 0.318762 4.4:+18317516 None:intergenic
GATCCGCATGTTTCCAGTTT+GGG 0.318958 4.4:-18318108 MS.gene34993:CDS
CATGTCAGCAGCTGCTGTTT+TGG 0.319086 4.4:-18317826 MS.gene34993:CDS
ATTGAAGCCTGCTGAGTGTT+TGG 0.320390 4.4:-18320176 MS.gene34993:CDS
ATCCCTTCTTAATCCTTTCC+CGG 0.327804 4.4:+18320017 None:intergenic
GAAAATGCAGGCTGGGGTCT+TGG 0.340594 4.4:-18319920 MS.gene34993:CDS
ATGTTTCCAGTTTGGGCTAC+TGG 0.352423 4.4:-18318101 MS.gene34993:CDS
CATAAACTTCGCATGGCATC+TGG 0.353544 4.4:+18317645 None:intergenic
TGATCCGCATGTTTCCAGTT+TGG 0.354435 4.4:-18318109 MS.gene34993:CDS
CTGCAGATTGCGAACGAGCT+TGG 0.360051 4.4:-18317792 MS.gene34993:CDS
TGCAGATTGCGAACGAGCTT+GGG 0.368793 4.4:-18317791 MS.gene34993:CDS
GTCTCTACCTGATTGCGCTT+GGG 0.374585 4.4:-18320102 MS.gene34993:CDS
GTGGTGACTATTCTAACCTT+TGG 0.376077 4.4:-18318172 MS.gene34993:CDS
ATTCTTACTGGGGACGATAC+TGG 0.377598 4.4:-18320761 MS.gene34993:CDS
GTCACTTCTGACTACTTCAC+TGG 0.378429 4.4:-18317613 MS.gene34993:CDS
TTGAAGCCTGCTGAGTGTTT+GGG 0.391323 4.4:-18320175 MS.gene34993:CDS
TGTTACCTTGCACCTCTCAT+TGG 0.393805 4.4:-18320798 MS.gene34993:CDS
CCACAAACAATGTTGACATC+TGG 0.401887 4.4:+18318054 None:intergenic
ACCTGGCACATTCTTGTAAG+AGG 0.405587 4.4:+18319806 None:intergenic
CTGTACCCCTTACTATACTA+TGG 0.407601 4.4:-18317749 MS.gene34993:CDS
TACCTGATTGCGCTTGGGAC+TGG 0.412113 4.4:-18320097 MS.gene34993:CDS
ATGGCTCGGTTGACTTTAAA+GGG 0.412816 4.4:-18321080 MS.gene34993:CDS
ATGTAGCTTGCGAGTAAGAT+AGG 0.425650 4.4:+18320869 None:intergenic
CACTCAGCAGGCTTCAATGC+TGG 0.427383 4.4:+18320181 None:intergenic
GGTCTCTACCTGATTGCGCT+TGG 0.427510 4.4:-18320103 MS.gene34993:CDS
GGAAGATTCATCGCGTACTT+TGG 0.427942 4.4:-18322255 MS.gene34993:CDS
CAATAAAACTGCTTGATACA+AGG 0.433027 4.4:+18319954 None:intergenic
TACAAGAATGTGCCAGGTTG+TGG 0.435062 4.4:-18319801 MS.gene34993:CDS
GCATATTGTGCAGGAGTAGC+TGG 0.436853 4.4:+18320139 None:intergenic
CATAGTATAGTAAGGGGTAC+AGG 0.441635 4.4:+18317750 None:intergenic
CGGCAAGACACGTCACTACT+TGG 0.445268 4.4:-18320830 MS.gene34993:CDS
GAAATTTACTGGCAAAGAAA+GGG 0.445439 4.4:-18317901 MS.gene34993:CDS
GGAAATTTACTGGCAAAGAA+AGG 0.446969 4.4:-18317902 MS.gene34993:CDS
TGTTGTCTCGTGCAGGGAAT+GGG 0.447601 4.4:-18320229 MS.gene34993:intron
CACCAGTCCCAAGCGCAATC+AGG 0.449732 4.4:+18320095 None:intergenic
CCCGTGCTTAAGCAGAATAC+TGG 0.455033 4.4:-18321054 MS.gene34993:CDS
TGGATTCCAGATAATTTGAA+TGG 0.455088 4.4:-18317522 MS.gene34993:CDS
ATAATGCCAGTAGCCCAAAC+TGG 0.457072 4.4:+18318095 None:intergenic
TCTGGGTCCCTGTCTATGAC+AGG 0.460821 4.4:-18317944 MS.gene34993:CDS
GGATTTGCCATAGTATAGTA+AGG 0.466110 4.4:+18317742 None:intergenic
CCAGATGTCAACATTGTTTG+TGG 0.471109 4.4:-18318054 MS.gene34993:CDS
GACAAGAGCTCTGCAATTGA+AGG 0.471271 4.4:-18319713 MS.gene34993:CDS
TTCGCATGGCATCTGGAGAT+TGG 0.473235 4.4:+18317652 None:intergenic
ACTATAAACCTGTCATAGAC+AGG 0.482414 4.4:+18317936 None:intergenic
CCCTCTTACAAGAATGTGCC+AGG 0.485020 4.4:-18319807 MS.gene34993:CDS
AAATGAGTGCTGTGAACGTT+TGG 0.486042 4.4:-18320922 MS.gene34993:CDS
GAGTTGCAAAGAATGGGAAT+TGG 0.489618 4.4:-18317870 MS.gene34993:CDS
TTAAGCAGAATACTGGCAAC+TGG 0.494822 4.4:-18321047 MS.gene34993:CDS
TCAAAAGTTGAGAGGGAAGC+TGG 0.497139 4.4:+18317984 None:intergenic
GCAGAAGTATTCACATTCGT+GGG 0.498185 4.4:-18317696 MS.gene34993:CDS
CACAAACAATGTTGACATCT+GGG 0.498393 4.4:+18318055 None:intergenic
TACAAGAGACTACTATCCTC+AGG 0.499157 4.4:+18319746 None:intergenic
AAAGCTTGTCCATTTATCCT+AGG 0.499238 4.4:-18321024 MS.gene34993:intron
TGCGAACGAGCTTGGGCTTG+TGG 0.501123 4.4:-18317784 MS.gene34993:CDS
ATAGTAAGGGGTACAGGGAC+AGG 0.501849 4.4:+18317756 None:intergenic
AATTACAATGAAGTAAATCA+TGG 0.505743 4.4:+18320722 None:intergenic
TCCCTTCTTAATCCTTTCCC+GGG 0.505746 4.4:+18320018 None:intergenic
GATTCAAGAAAATGCAGGCT+GGG 0.507809 4.4:-18319927 MS.gene34993:CDS
AAATTATCTGGAATCCATCC+AGG 0.515027 4.4:+18317528 None:intergenic
AAACTGATCTGCCCCAAAAG+AGG 0.516439 4.4:+18320054 None:intergenic
AGCAGAAGTATTCACATTCG+TGG 0.516878 4.4:-18317697 MS.gene34993:CDS
GCCAGTATTCTGCTTAAGCA+CGG 0.524420 4.4:+18321053 None:intergenic
CCAGTATTCTGCTTAAGCAC+GGG 0.535944 4.4:+18321054 None:intergenic
TCAACATTGTTTGTGGAACA+AGG 0.537468 4.4:-18318047 MS.gene34993:CDS
GAGACTTTGCACTGTGACAC+AGG 0.538657 4.4:-18318150 MS.gene34993:CDS
GGATTCAAGAAAATGCAGGC+TGG 0.539579 4.4:-18319928 MS.gene34993:CDS
GCTAATCCCATAAATAAAGC+AGG 0.540709 4.4:+18319887 None:intergenic
GGTTTATAGTTCCAATTGCA+AGG 0.543519 4.4:-18317923 MS.gene34993:CDS
TCCCCGGGAAAGGATTAAGA+AGG 0.545626 4.4:-18320020 MS.gene34993:CDS
ATGATACTGATCCCCGGGAA+AGG 0.547674 4.4:-18320030 MS.gene34993:CDS
TAGTAGTCTCTTGTACGAAA+CGG 0.552468 4.4:-18319738 MS.gene34993:CDS
AGTTCTAGCAGATTCTTACT+GGG 0.559492 4.4:-18320772 MS.gene34993:CDS
GCAGCACCCAAACACTCAGC+AGG 0.559886 4.4:+18320169 None:intergenic
AATAAAACTGCTTGATACAA+GGG 0.562387 4.4:+18319955 None:intergenic
TTGCACTGTGACACAGGTGG+AGG 0.563549 4.4:-18318144 MS.gene34993:CDS
AGTAAGCTTTACACAGGAGA+TGG 0.565342 4.4:-18321099 MS.gene34993:CDS
CTGATTGCGCTTGGGACTGG+TGG 0.569652 4.4:-18320094 MS.gene34993:CDS
GAAAAGATGCTGCCACAACC+TGG 0.573806 4.4:+18319789 None:intergenic
GTTTGATGATACTGATCCCC+GGG 0.576524 4.4:-18320035 MS.gene34993:CDS
CTTACTCGCAAGCTACATGA+AGG 0.577120 4.4:-18320864 MS.gene34993:CDS
TCACTTCTGACTACTTCACT+GGG 0.577467 4.4:-18317612 MS.gene34993:CDS
CCTGGCACATTCTTGTAAGA+GGG 0.578165 4.4:+18319807 None:intergenic
TTATTTATGGGATTAGCCAT+CGG 0.583415 4.4:-18319881 MS.gene34993:CDS
AAATTTACTGGCAAAGAAAG+GGG 0.587108 4.4:-18317900 MS.gene34993:CDS
GCTTTACACAGGAGATGGCT+CGG 0.589644 4.4:-18321094 MS.gene34993:CDS
AGTTTGATGATACTGATCCC+CGG 0.590421 4.4:-18320036 MS.gene34993:CDS
TCTGATGCTGAGAGGAAAAG+TGG 0.591094 4.4:-18318191 MS.gene34993:CDS
ACGCGATGAATCTTCCTCTA+CGG 0.600209 4.4:+18322262 None:intergenic
TGTGAACGTTTGGCATACTA+CGG 0.601727 4.4:-18320912 MS.gene34993:CDS
GAAGAGAGTAAGCTTTACAC+AGG 0.604640 4.4:-18321105 MS.gene34993:CDS
GCTCTGCAATTGAAGGAAGT+CGG 0.605687 4.4:-18319706 MS.gene34993:CDS
AATTACATCAAAAGTTGAGA+GGG 0.606804 4.4:+18317977 None:intergenic
ATTCCAGATAATTTGAATGG+AGG 0.607985 4.4:-18317519 MS.gene34993:CDS
ATAGTATAGTAAGGGGTACA+GGG 0.610486 4.4:+18317751 None:intergenic
GATTTGCCATAGTATAGTAA+GGG 0.612787 4.4:+18317743 None:intergenic
ACTATGATGAACACTAGTAT+CGG 0.613753 4.4:-18318023 MS.gene34993:CDS
AGCACTGCATAAACTTCGCA+TGG 0.615419 4.4:+18317638 None:intergenic
GTGTGGATTCAAGAAAATGC+AGG 0.620641 4.4:-18319932 MS.gene34993:CDS
CCCTTCTTAATCCTTTCCCG+GGG 0.625514 4.4:+18320019 None:intergenic
AGACACGTCACTACTTGGCA+AGG 0.625847 4.4:-18320825 MS.gene34993:CDS
TAATTACATCAAAAGTTGAG+AGG 0.625894 4.4:+18317976 None:intergenic
ATTCAAGAAAATGCAGGCTG+GGG 0.627196 4.4:-18319926 MS.gene34993:CDS
GCTAGAACTGCTCCAATGAG+AGG 0.630490 4.4:+18320786 None:intergenic
AAAGTTGAGAGGGAAGCTGG+TGG 0.638855 4.4:+18317987 None:intergenic
GGAGAAAATGGGTTCCGTAG+AGG 0.645377 4.4:-18322276 None:intergenic
ACAAGAGACTACTATCCTCA+GGG 0.646212 4.4:+18319747 None:intergenic
AACTTACTTCTCTACACGAG+GGG 0.646338 4.4:-18317556 MS.gene34993:CDS
GTAACTTACTTCTCTACACG+AGG 0.646598 4.4:-18317558 MS.gene34993:CDS
CTATAAACCTGTCATAGACA+GGG 0.648079 4.4:+18317937 None:intergenic
TCACAGTGCAAAGTCTCCAA+AGG 0.648321 4.4:+18318156 None:intergenic
AAGTTGAGAGGGAAGCTGGT+GGG 0.649456 4.4:+18317988 None:intergenic
CTGTAGTCTCTGATGCTGAG+AGG 0.653969 4.4:-18318199 MS.gene34993:CDS
CTGCTCCAATGAGAGGTGCA+AGG 0.655982 4.4:+18320793 None:intergenic
CCCCGGGAAAGGATTAAGAA+GGG 0.656177 4.4:-18320019 MS.gene34993:CDS
CTCCCAATAAGAAATACTGA+GGG 0.657516 4.4:+18317721 None:intergenic
ATTTGCCATAGTATAGTAAG+GGG 0.658896 4.4:+18317744 None:intergenic
TATTGTGCAGGAGTAGCTGG+AGG 0.663423 4.4:+18320142 None:intergenic
GTTCTAGCAGATTCTTACTG+GGG 0.673438 4.4:-18320771 MS.gene34993:CDS
ACTTTGCACTGTGACACAGG+TGG 0.676355 4.4:-18318147 MS.gene34993:CDS
GAGTTCTTTCATTCTCACTG+TGG 0.679581 4.4:-18317580 MS.gene34993:CDS
GCTCCCAATAAGAAATACTG+AGG 0.683176 4.4:+18317720 None:intergenic
ATTGTGCAGGAGTAGCTGGA+GGG 0.683715 4.4:+18320143 None:intergenic
GCCCCAAAAGAGGACACACA+TGG 0.688333 4.4:+18320064 None:intergenic
CAGAAGTATTCACATTCGTG+GGG 0.688336 4.4:-18317695 MS.gene34993:CDS
TAGCCCAAACTGGAAACATG+CGG 0.695289 4.4:+18318105 None:intergenic
TAACTTACTTCTCTACACGA+GGG 0.696917 4.4:-18317557 MS.gene34993:CDS
GCGGAATCTGGATGTCCCTG+AGG 0.708173 4.4:-18319762 MS.gene34993:CDS
TAGAGCATAGTGATGAACTG+AGG 0.711499 4.4:-18319679 MS.gene34993:intron
ACTTACTTCTCTACACGAGG+GGG 0.713796 4.4:-18317555 MS.gene34993:CDS
ACATGAAGGAAATGTCTCTG+CGG 0.738709 4.4:-18320850 MS.gene34993:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATTAACTTATATAAC+TGG - chr4.4:18317659-18317678 MS.gene34993:CDS 10.0%
!! ATAATAATAAGTATAGTAAT+TGG + chr4.4:18317600-18317619 None:intergenic 10.0%
!! TTACTATACTTATTATTATT+AGG - chr4.4:18317601-18317620 MS.gene34993:CDS 10.0%
!!! TAATTTTATTAATTGAAGAA+TGG + chr4.4:18317648-18317667 None:intergenic 10.0%
!! AAAGAAAAGAAAAAAATAGA+GGG + chr4.4:18317521-18317540 None:intergenic 15.0%
!! ATAACCTAATAATAATTGTA+TGG + chr4.4:18318145-18318164 None:intergenic 15.0%
!! ATATAAAGAAGATTTAGAAA+TGG + chr4.4:18319121-18319140 None:intergenic 15.0%
!! ATTTCCATACAATTATTATT+AGG - chr4.4:18318138-18318157 MS.gene34993:CDS 15.0%
!! ATTTCTAAATCTTCTTTATA+TGG - chr4.4:18319120-18319139 MS.gene34993:intron 15.0%
!! GTTATAAGAAACAAATATTA+TGG - chr4.4:18319172-18319191 MS.gene34993:intron 15.0%
!! TACTTATTATTATTAGGATT+AGG - chr4.4:18317607-18317626 MS.gene34993:CDS 15.0%
!! TATCAACACAAATTATTATT+AGG + chr4.4:18321361-18321380 None:intergenic 15.0%
!! TTTCATATAAAATGCAAATA+CGG + chr4.4:18320891-18320910 None:intergenic 15.0%
!! TTTCTAAATCTTCTTTATAT+GGG - chr4.4:18319121-18319140 MS.gene34993:intron 15.0%
!!! AAAAAAAGCTTTATTTACTT+CGG - chr4.4:18321116-18321135 MS.gene34993:intron 15.0%
!!! AATGTTTTTATTACTATTTG+GGG - chr4.4:18318274-18318293 MS.gene34993:intron 15.0%
!!! ACAACATTAAATTTAAAGTA+AGG + chr4.4:18320041-18320060 None:intergenic 15.0%
!!! ATTTTTTTAACATTAGAGTA+GGG + chr4.4:18320214-18320233 None:intergenic 15.0%
!!! CAACATTAAATTTAAAGTAA+GGG + chr4.4:18320040-18320059 None:intergenic 15.0%
!!! CAATGTTTTTATTACTATTT+GGG - chr4.4:18318273-18318292 MS.gene34993:intron 15.0%
!!! TCAATGTTTTTATTACTATT+TGG - chr4.4:18318272-18318291 MS.gene34993:intron 15.0%
!! AAAGTTATAGGGTTAATATT+AGG - chr4.4:18319310-18319329 MS.gene34993:intron 20.0%
!! AAATCAATAAACTACGAATT+TGG + chr4.4:18320166-18320185 None:intergenic 20.0%
!! AATTACAATGAAGTAAATCA+TGG + chr4.4:18318966-18318985 None:intergenic 20.0%
!! ATAGGAGAATAAAAATATCT+TGG + chr4.4:18318994-18319013 None:intergenic 20.0%
!! ATGAATTTGAGTATTATAGT+CGG + chr4.4:18319278-18319297 None:intergenic 20.0%
!! ATTTGACATTTAACTATCAA+GGG + chr4.4:18318445-18318464 None:intergenic 20.0%
!! CTACTCTAATGTTAAAAAAA+TGG - chr4.4:18320213-18320232 MS.gene34993:CDS 20.0%
!! GAAAGAAAAGAAAAAAATAG+AGG + chr4.4:18317522-18317541 None:intergenic 20.0%
!! TAAATAATCAAACACACAAA+TGG - chr4.4:18317748-18317767 MS.gene34993:CDS 20.0%
!! TAGCCAAAAAAAATCAAAAA+TGG + chr4.4:18320676-18320695 None:intergenic 20.0%
!! TATTTGACATTTAACTATCA+AGG + chr4.4:18318446-18318465 None:intergenic 20.0%
!! TTATTATTAGGATTAGGATT+AGG - chr4.4:18317613-18317632 MS.gene34993:CDS 20.0%
!! TTCTAAATCTTCTTTATATG+GGG - chr4.4:18319122-18319141 MS.gene34993:intron 20.0%
!!! ATTTGTGTTGATATCAATAA+AGG - chr4.4:18321368-18321387 MS.gene34993:intron 20.0%
!!! CATTTTTTTAACATTAGAGT+AGG + chr4.4:18320215-18320234 None:intergenic 20.0%
!!! GTGTAGAGAATTTTATAAAT+AGG + chr4.4:18319012-18319031 None:intergenic 20.0%
!!! TATTAGAAATTTTTTACCAG+AGG + chr4.4:18321326-18321345 None:intergenic 20.0%
!!! TCACCATTTTTGATTTTTTT+TGG - chr4.4:18320670-18320689 MS.gene34993:intron 20.0%
!!! TTTTAATGTACTAACAGATA+GGG - chr4.4:18317773-18317792 MS.gene34993:CDS 20.0%
!!! TTTTACTTTTCTATCAACAT+AGG - chr4.4:18319705-18319724 MS.gene34993:CDS 20.0%
!!! TTTTGAGATCTATGATTTAT+TGG - chr4.4:18320824-18320843 MS.gene34993:CDS 20.0%
! AAATGGAAGTTGTATATGTA+AGG - chr4.4:18320230-18320249 MS.gene34993:intron 25.0%
! AACACTTAAACAGGAATATT+GGG + chr4.4:18320130-18320149 None:intergenic 25.0%
! AATAAAACTGCTTGATACAA+GGG + chr4.4:18319733-18319752 None:intergenic 25.0%
! AATAACCAATAGTTCATCAT+AGG + chr4.4:18318545-18318564 None:intergenic 25.0%
! AATGGAAGTTGTATATGTAA+GGG - chr4.4:18320231-18320250 MS.gene34993:intron 25.0%
! AATTACATCAAAAGTTGAGA+GGG + chr4.4:18321711-18321730 None:intergenic 25.0%
! ACAATAACATTCCTTGAAAA+CGG + chr4.4:18321231-18321250 None:intergenic 25.0%
! AGAGTAAGTTAGATGATATT+AGG + chr4.4:18320318-18320337 None:intergenic 25.0%
! ATAACCAATAGTTCATCATA+GGG + chr4.4:18318544-18318563 None:intergenic 25.0%
! ATCTTTAGCCAAAATTTCAA+TGG - chr4.4:18320597-18320616 MS.gene34993:intron 25.0%
! CAAAAGATACAAGAAAAAGA+AGG - chr4.4:18322261-18322280 MS.gene34993:CDS 25.0%
! CATCACAAATTACATTATGT+AGG + chr4.4:18319079-18319098 None:intergenic 25.0%
! GTTACATAAGTGAAATGAAA+AGG + chr4.4:18318691-18318710 None:intergenic 25.0%
! TAAATTCTTACAATCCAGAT+AGG + chr4.4:18321063-18321082 None:intergenic 25.0%
! TAATTACATCAAAAGTTGAG+AGG + chr4.4:18321712-18321731 None:intergenic 25.0%
! TGCACAAGATAGAAATAAAA+AGG + chr4.4:18321841-18321860 None:intergenic 25.0%
! TTATGATCAAGAGTTGAATA+AGG + chr4.4:18317716-18317735 None:intergenic 25.0%
!! ATGTAATTTGTGATGGTAAT+AGG - chr4.4:18319084-18319103 MS.gene34993:intron 25.0%
!! CATGTAAACAATTTTCTCTT+TGG - chr4.4:18321277-18321296 MS.gene34993:intron 25.0%
!! CTACATAATGTAATTTGTGA+TGG - chr4.4:18319077-18319096 MS.gene34993:intron 25.0%
!! CTTCTTTTTCTTGTATCTTT+TGG + chr4.4:18322263-18322282 None:intergenic 25.0%
!!! ACTTTCCTTTGTTTTAATGA+AGG - chr4.4:18321447-18321466 MS.gene34993:intron 25.0%
!!! ATGTAATTAGCGTTATTTTC+TGG - chr4.4:18321723-18321742 MS.gene34993:intron 25.0%
!!! ATTGGTTATTTTTCATCTGA+AGG - chr4.4:18318555-18318574 MS.gene34993:intron 25.0%
!!! GTTTTAATGTACTAACAGAT+AGG - chr4.4:18317772-18317791 MS.gene34993:CDS 25.0%
!!! TGTAATTAGCGTTATTTTCT+GGG - chr4.4:18321724-18321743 MS.gene34993:intron 25.0%
AAACCTTGTGTCAAAAAACT+AGG + chr4.4:18320635-18320654 None:intergenic 30.0%
AAATTTACTGGCAAAGAAAG+GGG - chr4.4:18321785-18321804 MS.gene34993:intron 30.0%
AACCTTGTGTCAAAAAACTA+GGG + chr4.4:18320634-18320653 None:intergenic 30.0%
AAGGTATAGTATTGTCATGT+GGG + chr4.4:18318096-18318115 None:intergenic 30.0%
AATCCCTCAGTATTTCTTAT+TGG - chr4.4:18321961-18321980 MS.gene34993:intron 30.0%
ACTATGATGAACACTAGTAT+CGG - chr4.4:18321662-18321681 MS.gene34993:intron 30.0%
ACTTGAGTAATTTCCATATC+TGG + chr4.4:18318344-18318363 None:intergenic 30.0%
AGACACCTTCATTAAAACAA+AGG + chr4.4:18321455-18321474 None:intergenic 30.0%
ATATAGTGTGGACAATGAAT+AGG - chr4.4:18317818-18317837 MS.gene34993:CDS 30.0%
ATCAGATAGTGACTATGATT+AGG + chr4.4:18318184-18318203 None:intergenic 30.0%
ATCCCTCAGTATTTCTTATT+GGG - chr4.4:18321962-18321981 MS.gene34993:intron 30.0%
ATCGTTTAGGCAAGAAAATT+AGG + chr4.4:18320973-18320992 None:intergenic 30.0%
ATGTCTAATTGTGATCGTTT+AGG + chr4.4:18320986-18321005 None:intergenic 30.0%
ATTCCAGATAATTTGAATGG+AGG - chr4.4:18322166-18322185 MS.gene34993:intron 30.0%
ATTTCACACACTCATTAACA+GGG - chr4.4:18321418-18321437 MS.gene34993:intron 30.0%
ATTTGCCATAGTATAGTAAG+GGG + chr4.4:18321944-18321963 None:intergenic 30.0%
CAACACTTAAACAGGAATAT+TGG + chr4.4:18320131-18320150 None:intergenic 30.0%
CAATAAAACTGCTTGATACA+AGG + chr4.4:18319734-18319753 None:intergenic 30.0%
CAATAAACTACGAATTTGGT+GGG + chr4.4:18320162-18320181 None:intergenic 30.0%
CCCACATTTGAAAAGTTATA+GGG - chr4.4:18319299-18319318 MS.gene34993:intron 30.0%
CCTACTGTTTCAAAATTTCA+CGG - chr4.4:18320706-18320725 MS.gene34993:intron 30.0%
CTACTGTTTCAAAATTTCAC+GGG - chr4.4:18320707-18320726 MS.gene34993:intron 30.0%
CTTTGTAATAAATGACGCAT+CGG + chr4.4:18317898-18317917 None:intergenic 30.0%
GAAATTTACTGGCAAAGAAA+GGG - chr4.4:18321784-18321803 MS.gene34993:intron 30.0%
GAAGTAAATCATGGAGAAAA+TGG + chr4.4:18318957-18318976 None:intergenic 30.0%
GATTTGCCATAGTATAGTAA+GGG + chr4.4:18321945-18321964 None:intergenic 30.0%
GGACACAATAACTTGATATA+GGG + chr4.4:18320950-18320969 None:intergenic 30.0%
GTTAACATCCTAATATAGTG+TGG - chr4.4:18317806-18317825 MS.gene34993:CDS 30.0%
TACTGTTTCAAAATTTCACG+GGG - chr4.4:18320708-18320727 MS.gene34993:intron 30.0%
TCAATAAACTACGAATTTGG+TGG + chr4.4:18320163-18320182 None:intergenic 30.0%
TCATATGTGATATGAAACAC+AGG - chr4.4:18318740-18318759 MS.gene34993:intron 30.0%
TCCCACATTTGAAAAGTTAT+AGG - chr4.4:18319298-18319317 MS.gene34993:intron 30.0%
TCGTTTAGGCAAGAAAATTA+GGG + chr4.4:18320972-18320991 None:intergenic 30.0%
TCTATAGGTTTCAAAAACCA+GGG - chr4.4:18319850-18319869 MS.gene34993:CDS 30.0%
TGCTGAAGAAAAATGGAAAT+GGG - chr4.4:18319195-18319214 MS.gene34993:intron 30.0%
TGGATTCCAGATAATTTGAA+TGG - chr4.4:18322163-18322182 MS.gene34993:intron 30.0%
TTAATTACTAGACTGTTGTC+AGG - chr4.4:18321150-18321169 MS.gene34993:intron 30.0%
TTAGGATTAGGATTAGGATT+AGG - chr4.4:18317619-18317638 MS.gene34993:CDS 30.0%
TTCAAGGAATGTTATTGTCA+TGG - chr4.4:18321233-18321252 MS.gene34993:intron 30.0%
TTCATTGTCCACACTATATT+AGG + chr4.4:18317817-18317836 None:intergenic 30.0%
TTTAGAGAGAACATGCAATT+TGG - chr4.4:18320566-18320585 MS.gene34993:intron 30.0%
! ACCCTATAACTTTTCAAATG+TGG + chr4.4:18319303-18319322 None:intergenic 30.0%
! ATTATGGTGCTGAAGAAAAA+TGG - chr4.4:18319188-18319207 MS.gene34993:intron 30.0%
! CAATATGCTGTGTTTTTCAT+TGG - chr4.4:18319561-18319580 MS.gene34993:intron 30.0%
! CCCTATAACTTTTCAAATGT+GGG + chr4.4:18319302-18319321 None:intergenic 30.0%
! TCTCTTTGGAAGTCTTTAAT+AGG - chr4.4:18321291-18321310 MS.gene34993:intron 30.0%
!! TTATTTATGGGATTAGCCAT+CGG - chr4.4:18319804-18319823 MS.gene34993:CDS 30.0%
!!! TATCAAGCAGTTTTATTGTG+TGG - chr4.4:18319736-18319755 MS.gene34993:CDS 30.0%
!!! TGGTTTTTGAAACCTATAGA+GGG + chr4.4:18319850-18319869 None:intergenic 30.0%
AAAAACACAGCATATTGTGC+AGG + chr4.4:18319558-18319577 None:intergenic 35.0%
AAAGCTTGTCCATTTATCCT+AGG - chr4.4:18318661-18318680 MS.gene34993:intron 35.0%
AAAGGCTTACCTAGGATAAA+TGG + chr4.4:18318673-18318692 None:intergenic 35.0%
AAAGGTTATTATCCCATCCA+GGG + chr4.4:18320736-18320755 None:intergenic 35.0%
ACTATAAACCTGTCATAGAC+AGG + chr4.4:18321752-18321771 None:intergenic 35.0%
ATGGGATAATAACCTTTGGA+TGG - chr4.4:18320739-18320758 MS.gene34993:CDS 35.0%
CACAAACAATGTTGACATCT+GGG + chr4.4:18321633-18321652 None:intergenic 35.0%
CCAATTGCAAGGAAATTTAC+TGG - chr4.4:18321773-18321792 MS.gene34993:intron 35.0%
CCAGTAAATTTCCTTGCAAT+TGG + chr4.4:18321776-18321795 None:intergenic 35.0%
CGATGCGTCATTTATTACAA+AGG - chr4.4:18317896-18317915 MS.gene34993:CDS 35.0%
CGTTTAGGCAAGAAAATTAG+GGG + chr4.4:18320971-18320990 None:intergenic 35.0%
CTATAAACCTGTCATAGACA+GGG + chr4.4:18321751-18321770 None:intergenic 35.0%
CTATAGGTTTCAAAAACCAG+GGG - chr4.4:18319851-18319870 MS.gene34993:CDS 35.0%
CTCCCAATAAGAAATACTGA+GGG + chr4.4:18321967-18321986 None:intergenic 35.0%
CTCTATAGGTTTCAAAAACC+AGG - chr4.4:18319849-18319868 MS.gene34993:CDS 35.0%
GATCATAGTACACTCAAAAC+TGG + chr4.4:18319233-18319252 None:intergenic 35.0%
GATTTCACACACTCATTAAC+AGG - chr4.4:18321417-18321436 MS.gene34993:intron 35.0%
GCAACATTTATACCATCCAA+AGG + chr4.4:18320754-18320773 None:intergenic 35.0%
GCATATGAAAAGGGAAAACA+GGG + chr4.4:18318423-18318442 None:intergenic 35.0%
GCTAATCCCATAAATAAAGC+AGG + chr4.4:18319801-18319820 None:intergenic 35.0%
GGAAATTTACTGGCAAAGAA+AGG - chr4.4:18321783-18321802 MS.gene34993:intron 35.0%
GGATTTGCCATAGTATAGTA+AGG + chr4.4:18321946-18321965 None:intergenic 35.0%
GGGACACAATAACTTGATAT+AGG + chr4.4:18320951-18320970 None:intergenic 35.0%
GGGTTAATATTAGGAACAGT+AGG - chr4.4:18319319-18319338 MS.gene34993:intron 35.0%
GGTTTATAGTTCCAATTGCA+AGG - chr4.4:18321762-18321781 MS.gene34993:intron 35.0%
GTATCACTCATAACCAGATA+TGG - chr4.4:18318328-18318347 MS.gene34993:intron 35.0%
GTCACACTTGCAAAAAACAA+GGG - chr4.4:18320077-18320096 MS.gene34993:CDS 35.0%
GTGCTGAAGAAAAATGGAAA+TGG - chr4.4:18319194-18319213 MS.gene34993:intron 35.0%
TAAAATTGTTGTCTCGTGCA+GGG - chr4.4:18319450-18319469 MS.gene34993:intron 35.0%
TAACTTACTTCTCTACACGA+GGG - chr4.4:18322128-18322147 MS.gene34993:intron 35.0%
TAGTAGTCTCTTGTACGAAA+CGG - chr4.4:18319947-18319966 MS.gene34993:CDS 35.0%
TATAGGTTTCAAAAACCAGG+GGG - chr4.4:18319852-18319871 MS.gene34993:CDS 35.0%
TCAACATTGTTTGTGGAACA+AGG - chr4.4:18321638-18321657 MS.gene34993:intron 35.0%
TCTGTCACAATCATCAAAGT+TGG - chr4.4:18320536-18320555 MS.gene34993:intron 35.0%
TCTTCCCTATGATGAACTAT+TGG - chr4.4:18318537-18318556 MS.gene34993:intron 35.0%
TGAAATGAAAAGGCTTACCT+AGG + chr4.4:18318681-18318700 None:intergenic 35.0%
TGACCTCCATTCAAATTATC+TGG + chr4.4:18322172-18322191 None:intergenic 35.0%
TGTATGGAAATGAAGTCGAT+TGG + chr4.4:18318129-18318148 None:intergenic 35.0%
TGTTGTAATGTTCTCAACCT+TGG - chr4.4:18320055-18320074 MS.gene34993:CDS 35.0%
TTGCACATAATCTACCTATC+TGG - chr4.4:18321046-18321065 MS.gene34993:CDS 35.0%
TTGCTCAATAGTGTGCAATA+CGG + chr4.4:18320417-18320436 None:intergenic 35.0%
TTTAGAAGAAAAAGAGACGC+CGG + chr4.4:18320461-18320480 None:intergenic 35.0%
TTTCTCCTATGATATACTGC+TGG - chr4.4:18319035-18319054 MS.gene34993:intron 35.0%
! AAATTATCTGGAATCCATCC+AGG + chr4.4:18322160-18322179 None:intergenic 35.0%
! ACAGATCTAGAGTTTAACGA+GGG + chr4.4:18320521-18320540 None:intergenic 35.0%
! ACTATCAAGGGCATATGAAA+AGG + chr4.4:18318433-18318452 None:intergenic 35.0%
! AGATGTGTTATTGAATCCTG+CGG + chr4.4:18318073-18318092 None:intergenic 35.0%
! AGTTCTAGCAGATTCTTACT+GGG - chr4.4:18318913-18318932 MS.gene34993:intron 35.0%
! ATACCCTTTTATAACCCTTC+CGG - chr4.4:18320439-18320458 MS.gene34993:intron 35.0%
! ATAGTATAGTAAGGGGTACA+GGG + chr4.4:18321937-18321956 None:intergenic 35.0%
! CTATCAAGGGCATATGAAAA+GGG + chr4.4:18318432-18318451 None:intergenic 35.0%
! CTTCTCTTTTTCCGTTTTCA+AGG - chr4.4:18321217-18321236 MS.gene34993:intron 35.0%
! GAAGGTATAGTATTGTCATG+TGG + chr4.4:18318097-18318116 None:intergenic 35.0%
! GCGTCTCTTTTTCTTCTAAA+GGG - chr4.4:18320461-18320480 MS.gene34993:intron 35.0%
! GTTTTCAGTCATGTATCTTG+TGG - chr4.4:18318219-18318238 MS.gene34993:CDS 35.0%
! TAATAGGTTGAGAAATCCTC+TGG - chr4.4:18321307-18321326 MS.gene34993:intron 35.0%
! TACCTGCACCATTGAAATTT+TGG + chr4.4:18320608-18320627 None:intergenic 35.0%
! TTTTCGGAGTTGCAAAGAAT+GGG - chr4.4:18321809-18321828 MS.gene34993:intron 35.0%
!! AAGGCTTTTTAAAGACCAAC+TGG + chr4.4:18320258-18320277 None:intergenic 35.0%
!! AGAAGGGATCATTTTTCAAC+TGG - chr4.4:18319682-18319701 MS.gene34993:CDS 35.0%
!! GGCATTCCTGCTTTATTTAT+GGG - chr4.4:18319792-18319811 MS.gene34993:CDS 35.0%
!! TCAGGTTTTCTCTTTTGAGT+TGG - chr4.4:18321168-18321187 MS.gene34993:intron 35.0%
!! TGGCATTCCTGCTTTATTTA+TGG - chr4.4:18319791-18319810 MS.gene34993:CDS 35.0%
!!! ATTTTGAAACAGTAGGTTGC+TGG + chr4.4:18320702-18320721 None:intergenic 35.0%
!!! CCGTGAAATTTTGAAACAGT+AGG + chr4.4:18320709-18320728 None:intergenic 35.0%
!!! CTGGTTTTTGAAACCTATAG+AGG + chr4.4:18319851-18319870 None:intergenic 35.0%
!!! CTTTTTGAGATAGTGTTGCT+GGG - chr4.4:18318001-18318020 MS.gene34993:CDS 35.0%
!!! GGTTTTTGAAACCTATAGAG+GGG + chr4.4:18319849-18319868 None:intergenic 35.0%
!!! GTACACTCAAAACTGGTTTT+TGG + chr4.4:18319226-18319245 None:intergenic 35.0%
!!! GTCATCTCGATTACTTTTTC+TGG - chr4.4:18322188-18322207 MS.gene34993:intron 35.0%
!!! TACTTTTTCTGGCTTTTAGC+TGG - chr4.4:18322199-18322218 MS.gene34993:intron 35.0%
!!! TCTTTTTGAGATAGTGTTGC+TGG - chr4.4:18318000-18318019 MS.gene34993:CDS 35.0%
!!! TTCCCTAGTTTTTTGACACA+AGG - chr4.4:18320629-18320648 MS.gene34993:intron 35.0%
!!! TTCTCTTTTGAGTTGGCTAA+TGG - chr4.4:18321175-18321194 MS.gene34993:intron 35.0%
!!! TTTTTGAGATAGTGTTGCTG+GGG - chr4.4:18318002-18318021 MS.gene34993:CDS 35.0%
AACTTACTTCTCTACACGAG+GGG - chr4.4:18322129-18322148 MS.gene34993:intron 40.0%
ACAAGAGACTACTATCCTCA+GGG + chr4.4:18319941-18319960 None:intergenic 40.0%
ACATGAAGGAAATGTCTCTG+CGG - chr4.4:18318835-18318854 MS.gene34993:intron 40.0%
ACTACGATTGTTGGTCGATT+TGG - chr4.4:18318297-18318316 MS.gene34993:intron 40.0%
AGCCAAAATTTCAATGGTGC+AGG - chr4.4:18320603-18320622 MS.gene34993:intron 40.0%
AGTAAGCTTTACACAGGAGA+TGG - chr4.4:18318586-18318605 MS.gene34993:intron 40.0%
ATCCCTTCTTAATCCTTTCC+CGG + chr4.4:18319671-18319690 None:intergenic 40.0%
ATTCAAGAAAATGCAGGCTG+GGG - chr4.4:18319759-18319778 MS.gene34993:CDS 40.0%
ATTGTCATGGACAGTTCTGT+AGG - chr4.4:18321246-18321265 MS.gene34993:intron 40.0%
CAAAGGTTATTATCCCATCC+AGG + chr4.4:18320737-18320756 None:intergenic 40.0%
CATAGCCAGCAGTATATCAT+AGG + chr4.4:18319043-18319062 None:intergenic 40.0%
CCACAAACAATGTTGACATC+TGG + chr4.4:18321634-18321653 None:intergenic 40.0%
CCAGATGTCAACATTGTTTG+TGG - chr4.4:18321631-18321650 MS.gene34993:intron 40.0%
CTATCCTATCAGTCATTGTC+AGG + chr4.4:18320291-18320310 None:intergenic 40.0%
CTGACAATGACTGATAGGAT+AGG - chr4.4:18320289-18320308 MS.gene34993:intron 40.0%
CTGGATGGGATAATAACCTT+TGG - chr4.4:18320735-18320754 MS.gene34993:CDS 40.0%
CTGTACCCCTTACTATACTA+TGG - chr4.4:18321936-18321955 MS.gene34993:intron 40.0%
GAAGAGAGTAAGCTTTACAC+AGG - chr4.4:18318580-18318599 MS.gene34993:intron 40.0%
GAGTTCTTTCATTCTCACTG+TGG - chr4.4:18322105-18322124 MS.gene34993:intron 40.0%
GAGTTGCAAAGAATGGGAAT+TGG - chr4.4:18321815-18321834 MS.gene34993:intron 40.0%
GATTCAAGAAAATGCAGGCT+GGG - chr4.4:18319758-18319777 MS.gene34993:CDS 40.0%
GCCTAAAAAGAAACTTCCGA+TGG + chr4.4:18319823-18319842 None:intergenic 40.0%
GCTCCCAATAAGAAATACTG+AGG + chr4.4:18321968-18321987 None:intergenic 40.0%
GGCATATGAAAAGGGAAAAC+AGG + chr4.4:18318424-18318443 None:intergenic 40.0%
GGTCACACTTGCAAAAAACA+AGG - chr4.4:18320076-18320095 MS.gene34993:CDS 40.0%
GTAAAATTGTTGTCTCGTGC+AGG - chr4.4:18319449-18319468 MS.gene34993:intron 40.0%
GTAACTTACTTCTCTACACG+AGG - chr4.4:18322127-18322146 MS.gene34993:intron 40.0%
GTCGATTGGACAAAAGTAGA+AGG + chr4.4:18318115-18318134 None:intergenic 40.0%
GTGGTGACTATTCTAACCTT+TGG - chr4.4:18321513-18321532 MS.gene34993:intron 40.0%
GTGTGGATTCAAGAAAATGC+AGG - chr4.4:18319753-18319772 MS.gene34993:CDS 40.0%
GTTCTAGCAGATTCTTACTG+GGG - chr4.4:18318914-18318933 MS.gene34993:intron 40.0%
TACAAGAGACTACTATCCTC+AGG + chr4.4:18319942-18319961 None:intergenic 40.0%
TAGAGCATAGTGATGAACTG+AGG - chr4.4:18320006-18320025 MS.gene34993:CDS 40.0%
TATTTGGGGACTACGATTGT+TGG - chr4.4:18318288-18318307 MS.gene34993:intron 40.0%
TCACTTCTGACTACTTCACT+GGG - chr4.4:18322073-18322092 MS.gene34993:intron 40.0%
TGCTCGAGAAGGAATAAGTT+TGG + chr4.4:18319255-18319274 None:intergenic 40.0%
TGTATATGTAAGGGTCCAGT+TGG - chr4.4:18320240-18320259 MS.gene34993:intron 40.0%
TGTGAACGTTTGGCATACTA+CGG - chr4.4:18318773-18318792 MS.gene34993:intron 40.0%
TTAAGCAGAATACTGGCAAC+TGG - chr4.4:18318638-18318657 MS.gene34993:intron 40.0%
TTGCGGATATAGCACTTGAA+TGG - chr4.4:18317929-18317948 MS.gene34993:CDS 40.0%
! AAACCATGTGTGTCCTCTTT+TGG - chr4.4:18319618-18319637 MS.gene34993:intron 40.0%
! AAACTACGAATTTGGTGGGA+AGG + chr4.4:18320158-18320177 None:intergenic 40.0%
! AAATGAGTGCTGTGAACGTT+TGG - chr4.4:18318763-18318782 MS.gene34993:intron 40.0%
! AACCATGTGTGTCCTCTTTT+GGG - chr4.4:18319619-18319638 MS.gene34993:intron 40.0%
! AGTTTGATGATACTGATCCC+CGG - chr4.4:18319649-18319668 MS.gene34993:intron 40.0%
! ATGTAGCTTGCGAGTAAGAT+AGG + chr4.4:18318819-18318838 None:intergenic 40.0%
! CAGATCTAGAGTTTAACGAG+GGG + chr4.4:18320520-18320539 None:intergenic 40.0%
! CAGTTCTAGCAGATTCTTAC+TGG - chr4.4:18318912-18318931 MS.gene34993:intron 40.0%
! CATAGTATAGTAAGGGGTAC+AGG + chr4.4:18321938-18321957 None:intergenic 40.0%
! CTTTTCGGAGTTGCAAAGAA+TGG - chr4.4:18321808-18321827 MS.gene34993:intron 40.0%
! GACAGATCTAGAGTTTAACG+AGG + chr4.4:18320522-18320541 None:intergenic 40.0%
! GCCATCGGAAGTTTCTTTTT+AGG - chr4.4:18319819-18319838 MS.gene34993:CDS 40.0%
! GGCGTCTCTTTTTCTTCTAA+AGG - chr4.4:18320460-18320479 MS.gene34993:intron 40.0%
! TATCATCTGATGAGAGTGCA+TGG + chr4.4:18320393-18320412 None:intergenic 40.0%
!! ACAAAGGTGTCGTCAAATTG+CGG - chr4.4:18317912-18317931 MS.gene34993:CDS 40.0%
!! AGCAGAAGTATTCACATTCG+TGG - chr4.4:18321988-18322007 MS.gene34993:intron 40.0%
!! ATGGCTCGGTTGACTTTAAA+GGG - chr4.4:18318605-18318624 MS.gene34993:intron 40.0%
!! CAGAAGTATTCACATTCGTG+GGG - chr4.4:18321990-18322009 MS.gene34993:intron 40.0%
!! GCAGAAGTATTCACATTCGT+GGG - chr4.4:18321989-18322008 MS.gene34993:intron 40.0%
!!! GTTTTTTGCAAGTGTGACCA+AGG + chr4.4:18320075-18320094 None:intergenic 40.0%
AAACTGATCTGCCCCAAAAG+AGG + chr4.4:18319634-18319653 None:intergenic 45.0%
AAGAAAAAGAGACGCCGGAA+GGG + chr4.4:18320456-18320475 None:intergenic 45.0%
AAGGCGTGCAACACTTAAAC+AGG + chr4.4:18320139-18320158 None:intergenic 45.0%
ACCTGGCACATTCTTGTAAG+AGG + chr4.4:18319882-18319901 None:intergenic 45.0%
ACGCCGGAAGGGTTATAAAA+GGG + chr4.4:18320445-18320464 None:intergenic 45.0%
ACGCGATGAATCTTCCTCTA+CGG + chr4.4:18317426-18317445 None:intergenic 45.0%
ACTTACTTCTCTACACGAGG+GGG - chr4.4:18322130-18322149 MS.gene34993:intron 45.0%
AGCACTGCATAAACTTCGCA+TGG + chr4.4:18322050-18322069 None:intergenic 45.0%
AGGTGTCTGTATCTGCTTGA+TGG - chr4.4:18319339-18319358 MS.gene34993:intron 45.0%
ATAATGCCAGTAGCCCAAAC+TGG + chr4.4:18321593-18321612 None:intergenic 45.0%
ATGCAAATACGGCAACACAC+TGG + chr4.4:18320880-18320899 None:intergenic 45.0%
ATGTTTCCAGTTTGGGCTAC+TGG - chr4.4:18321584-18321603 MS.gene34993:intron 45.0%
ATTCTTACTGGGGACGATAC+TGG - chr4.4:18318924-18318943 MS.gene34993:intron 45.0%
ATTGAAGCCTGCTGAGTGTT+TGG - chr4.4:18319509-18319528 MS.gene34993:intron 45.0%
CAGCCTATGGGGAACAATAA+TGG + chr4.4:18320493-18320512 None:intergenic 45.0%
CATAAACTTCGCATGGCATC+TGG + chr4.4:18322043-18322062 None:intergenic 45.0%
CCAGTATTCTGCTTAAGCAC+GGG + chr4.4:18318634-18318653 None:intergenic 45.0%
CCTATCAGTCATTGTCAGGT+GGG + chr4.4:18320287-18320306 None:intergenic 45.0%
CCTGGCACATTCTTGTAAGA+GGG + chr4.4:18319881-18319900 None:intergenic 45.0%
CTGGGGTTTGTACCAATTCA+TGG - chr4.4:18318019-18318038 MS.gene34993:CDS 45.0%
CTTACTCGCAAGCTACATGA+AGG - chr4.4:18318821-18318840 MS.gene34993:intron 45.0%
GACAAGAGCTCTGCAATTGA+AGG - chr4.4:18319972-18319991 MS.gene34993:CDS 45.0%
GATCCGCATGTTTCCAGTTT+GGG - chr4.4:18321577-18321596 MS.gene34993:intron 45.0%
GCCAGTATTCTGCTTAAGCA+CGG + chr4.4:18318635-18318654 None:intergenic 45.0%
GCTCTGCAATTGAAGGAAGT+CGG - chr4.4:18319979-18319998 MS.gene34993:CDS 45.0%
GGAACAAGTGATCAGTCTTC+AGG + chr4.4:18320929-18320948 None:intergenic 45.0%
GGAAGATTCATCGCGTACTT+TGG - chr4.4:18317430-18317449 MS.gene34993:CDS 45.0%
GGATTCAAGAAAATGCAGGC+TGG - chr4.4:18319757-18319776 MS.gene34993:CDS 45.0%
GTCACTTCTGACTACTTCAC+TGG - chr4.4:18322072-18322091 MS.gene34993:intron 45.0%
TACAAGAATGTGCCAGGTTG+TGG - chr4.4:18319884-18319903 MS.gene34993:CDS 45.0%
TAGCCCAAACTGGAAACATG+CGG + chr4.4:18321583-18321602 None:intergenic 45.0%
TCAAAAGTTGAGAGGGAAGC+TGG + chr4.4:18321704-18321723 None:intergenic 45.0%
TCACAGTGCAAAGTCTCCAA+AGG + chr4.4:18321532-18321551 None:intergenic 45.0%
TCCCTTCTTAATCCTTTCCC+GGG + chr4.4:18319670-18319689 None:intergenic 45.0%
TCCTATCAGTCATTGTCAGG+TGG + chr4.4:18320288-18320307 None:intergenic 45.0%
TCGCCATTATTGTTCCCCAT+AGG - chr4.4:18320487-18320506 MS.gene34993:intron 45.0%
TCTGATGCTGAGAGGAAAAG+TGG - chr4.4:18321494-18321513 MS.gene34993:intron 45.0%
TGATCCGCATGTTTCCAGTT+TGG - chr4.4:18321576-18321595 MS.gene34993:intron 45.0%
TGTGCAAAGTTGCGCGATAA+AGG + chr4.4:18321033-18321052 None:intergenic 45.0%
TGTTACCTTGCACCTCTCAT+TGG - chr4.4:18318887-18318906 MS.gene34993:intron 45.0%
TTGAAGCCTGCTGAGTGTTT+GGG - chr4.4:18319510-18319529 MS.gene34993:intron 45.0%
! ACCATGTGTGTCCTCTTTTG+GGG - chr4.4:18319620-18319639 MS.gene34993:intron 45.0%
! AGGTTGTGGCAGCATCTTTT+CGG - chr4.4:18319898-18319917 MS.gene34993:CDS 45.0%
! ATCTGATGAGAGTGCATGGT+CGG + chr4.4:18320389-18320408 None:intergenic 45.0%
! ATCTTTTCGGAAGCGGAATC+TGG - chr4.4:18319911-18319930 MS.gene34993:CDS 45.0%
! ATTATAGTCGGTGCTCGAGA+AGG + chr4.4:18319266-18319285 None:intergenic 45.0%
! GTTTGATGATACTGATCCCC+GGG - chr4.4:18319650-18319669 MS.gene34993:intron 45.0%
! TCTCTGCTGCTTATGTGGAT+TGG - chr4.4:18318044-18318063 MS.gene34993:CDS 45.0%
! TGGCAAAGAAAGGGGCTTTT+CGG - chr4.4:18321793-18321812 MS.gene34993:intron 45.0%
! TTTTAGGCACACCCCTCTAT+AGG - chr4.4:18319835-18319854 MS.gene34993:CDS 45.0%
!! ACGATTGTTGGTCGATTTGG+TGG - chr4.4:18318300-18318319 MS.gene34993:intron 45.0%
!! GATGGCTCGGTTGACTTTAA+AGG - chr4.4:18318604-18318623 MS.gene34993:intron 45.0%
!! GGAAGAAGCTCTTGTTGTTC+AGG - chr4.4:18317451-18317470 MS.gene34993:CDS 45.0%
!! TTATGTGGATTGGTTTCCGC+AGG - chr4.4:18318054-18318073 MS.gene34993:CDS 45.0%
AAAGTTGAGAGGGAAGCTGG+TGG + chr4.4:18321701-18321720 None:intergenic 50.0%
AACGAGGGGATATCAGCCTA+TGG + chr4.4:18320506-18320525 None:intergenic 50.0%
AAGTTGAGAGGGAAGCTGGT+GGG + chr4.4:18321700-18321719 None:intergenic 50.0%
ACGAGGGGATATCAGCCTAT+GGG + chr4.4:18320505-18320524 None:intergenic 50.0%
ACTTTGCACTGTGACACAGG+TGG - chr4.4:18321538-18321557 MS.gene34993:intron 50.0%
AGACACGTCACTACTTGGCA+AGG - chr4.4:18318860-18318879 MS.gene34993:intron 50.0%
ATGATACTGATCCCCGGGAA+AGG - chr4.4:18319655-18319674 MS.gene34993:intron 50.0%
ATTGTCAGGTGGGACAGACA+AGG + chr4.4:18320277-18320296 None:intergenic 50.0%
ATTGTGCAGGAGTAGCTGGA+GGG + chr4.4:18319545-18319564 None:intergenic 50.0%
CAAAATTTCACGGGGAACCC+TGG - chr4.4:18320716-18320735 MS.gene34993:intron 50.0%
CCCACCTGACAATGACTGAT+AGG - chr4.4:18320284-18320303 MS.gene34993:intron 50.0%
CCCCGGGAAAGGATTAAGAA+GGG - chr4.4:18319666-18319685 MS.gene34993:intron 50.0%
CCCGTGCTTAAGCAGAATAC+TGG - chr4.4:18318631-18318650 MS.gene34993:intron 50.0%
CCCTCTTACAAGAATGTGCC+AGG - chr4.4:18319878-18319897 MS.gene34993:CDS 50.0%
CCCTTCTTAATCCTTTCCCG+GGG + chr4.4:18319669-18319688 None:intergenic 50.0%
CTGTAGTCTCTGATGCTGAG+AGG - chr4.4:18321486-18321505 MS.gene34993:intron 50.0%
GAAAAGATGCTGCCACAACC+TGG + chr4.4:18319899-18319918 None:intergenic 50.0%
GAAGAAAAAGAGACGCCGGA+AGG + chr4.4:18320457-18320476 None:intergenic 50.0%
GACGCCGGAAGGGTTATAAA+AGG + chr4.4:18320446-18320465 None:intergenic 50.0%
GAGACTTTGCACTGTGACAC+AGG - chr4.4:18321535-18321554 MS.gene34993:intron 50.0%
GCAGCAGAGAGTCCATGAAT+TGG + chr4.4:18318034-18318053 None:intergenic 50.0%
GCATATTGTGCAGGAGTAGC+TGG + chr4.4:18319549-18319568 None:intergenic 50.0%
GCTAGAACTGCTCCAATGAG+AGG + chr4.4:18318902-18318921 None:intergenic 50.0%
GCTTTACACAGGAGATGGCT+CGG - chr4.4:18318591-18318610 MS.gene34993:intron 50.0%
GTCTCTACCTGATTGCGCTT+GGG - chr4.4:18319583-18319602 MS.gene34993:intron 50.0%
TATTGTGCAGGAGTAGCTGG+AGG + chr4.4:18319546-18319565 None:intergenic 50.0%
TCCCCGGGAAAGGATTAAGA+AGG - chr4.4:18319665-18319684 MS.gene34993:intron 50.0%
TGCAGATTGCGAACGAGCTT+GGG - chr4.4:18321894-18321913 MS.gene34993:intron 50.0%
TGTTGTCTCGTGCAGGGAAT+GGG - chr4.4:18319456-18319475 MS.gene34993:intron 50.0%
TTCGCATGGCATCTGGAGAT+TGG + chr4.4:18322036-18322055 None:intergenic 50.0%
TTGTTGTCTCGTGCAGGGAA+TGG - chr4.4:18319455-18319474 MS.gene34993:intron 50.0%
! ATAGTAAGGGGTACAGGGAC+AGG + chr4.4:18321932-18321951 None:intergenic 50.0%
! TGGACTCTCTGCTGCTTATG+TGG - chr4.4:18318039-18318058 MS.gene34993:CDS 50.0%
! TGGCAGCATCTTTTCGGAAG+CGG - chr4.4:18319904-18319923 MS.gene34993:CDS 50.0%
!! CATGTCAGCAGCTGCTGTTT+TGG - chr4.4:18321859-18321878 MS.gene34993:intron 50.0%
ATTTCACGGGGAACCCTGGA+TGG - chr4.4:18320720-18320739 MS.gene34993:intron 55.0%
CACTCAGCAGGCTTCAATGC+TGG + chr4.4:18319507-18319526 None:intergenic 55.0%
CGAGGGGATATCAGCCTATG+GGG + chr4.4:18320504-18320523 None:intergenic 55.0%
CGGCAAGACACGTCACTACT+TGG - chr4.4:18318855-18318874 MS.gene34993:intron 55.0%
CTGCAGATTGCGAACGAGCT+TGG - chr4.4:18321893-18321912 MS.gene34993:intron 55.0%
GAAAATGCAGGCTGGGGTCT+TGG - chr4.4:18319765-18319784 MS.gene34993:CDS 55.0%
GCCCCAAAAGAGGACACACA+TGG + chr4.4:18319624-18319643 None:intergenic 55.0%
GGTCTCTACCTGATTGCGCT+TGG - chr4.4:18319582-18319601 MS.gene34993:intron 55.0%
TACCTGATTGCGCTTGGGAC+TGG - chr4.4:18319588-18319607 MS.gene34993:intron 55.0%
TCTACACGAGGGGGAAATCC+TGG - chr4.4:18322139-18322158 MS.gene34993:intron 55.0%
TCTGGGTCCCTGTCTATGAC+AGG - chr4.4:18321741-18321760 MS.gene34993:intron 55.0%
TTGCACTGTGACACAGGTGG+AGG - chr4.4:18321541-18321560 MS.gene34993:intron 55.0%
TTTCACGGGGAACCCTGGAT+GGG - chr4.4:18320721-18320740 MS.gene34993:intron 55.0%
! CTGCTCCAATGAGAGGTGCA+AGG + chr4.4:18318895-18318914 None:intergenic 55.0%
CACCAGTCCCAAGCGCAATC+AGG + chr4.4:18319593-18319612 None:intergenic 60.0%
CACGAGGGGGAAATCCTGGA+TGG - chr4.4:18322143-18322162 MS.gene34993:intron 60.0%
CTGATTGCGCTTGGGACTGG+TGG - chr4.4:18319591-18319610 MS.gene34993:intron 60.0%
CTTGTAAGAGGGCTTCCCCC+TGG + chr4.4:18319870-18319889 None:intergenic 60.0%
GCAGCACCCAAACACTCAGC+AGG + chr4.4:18319519-18319538 None:intergenic 60.0%
GCAGGCTGGGGTCTTGGATT+TGG - chr4.4:18319771-18319790 MS.gene34993:CDS 60.0%
GCGGAATCTGGATGTCCCTG+AGG - chr4.4:18319923-18319942 MS.gene34993:CDS 60.0%
TGCGAACGAGCTTGGGCTTG+TGG - chr4.4:18321901-18321920 MS.gene34993:intron 60.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 18317416 18322291 18317416 ID=MS.gene34993
chr4.4 mRNA 18317416 18322291 18317416 ID=MS.gene34993.t1;Parent=MS.gene34993
chr4.4 exon 18322235 18322291 18322235 ID=MS.gene34993.t1.exon1;Parent=MS.gene34993.t1
chr4.4 CDS 18322235 18322291 18322235 ID=cds.MS.gene34993.t1;Parent=MS.gene34993.t1
chr4.4 exon 18321025 18321130 18321025 ID=MS.gene34993.t1.exon2;Parent=MS.gene34993.t1
chr4.4 CDS 18321025 18321130 18321025 ID=cds.MS.gene34993.t1;Parent=MS.gene34993.t1
chr4.4 exon 18320728 18320945 18320728 ID=MS.gene34993.t1.exon3;Parent=MS.gene34993.t1
chr4.4 CDS 18320728 18320945 18320728 ID=cds.MS.gene34993.t1;Parent=MS.gene34993.t1
chr4.4 exon 18319680 18320236 18319680 ID=MS.gene34993.t1.exon4;Parent=MS.gene34993.t1
chr4.4 CDS 18319680 18320236 18319680 ID=cds.MS.gene34993.t1;Parent=MS.gene34993.t1
chr4.4 exon 18317416 18318238 18317416 ID=MS.gene34993.t1.exon5;Parent=MS.gene34993.t1
chr4.4 CDS 18317416 18318238 18317416 ID=cds.MS.gene34993.t1;Parent=MS.gene34993.t1
Gene Sequence

>MS.gene34993

ATGGGTTCCGTAGAGGAAGATTCATCGCGTACTTTGGAAGAAGCTCTTGTTGTTCAGGTTCAATTCTCTTTTTTCATTTTTCGCTTTTTTTCGTTGAGTCAACCCTCTATTTTTTTCTTTTCTTTCTATTGATTTGTTATTTATCACAATATTAACTATTCATTCGCTCAGTATGAATCTTCCAATTACTATACTTATTATTATTAGGATTAGGATTAGGATTAGGACTCCATTCTTCAATTAATAAAATTAACTTATATAACTGGAAGCTTCAATTGTGTGTTTAAATAAAACACACCTTATTCAACTCTTGATCATAACATAACAATCATTAAATAATCAAACACACAAATGGTGTTTTAATGTACTAACAGATAGGGTCTATTCAAAGTTAACATCCTAATATAGTGTGGACAATGAATAGGTCAAACTGTTGAGCTGTGTGAGCATGTAAAATTTGAACAAATCATTATTGTTTTCCGATGCGTCATTTATTACAAAGGTGTCGTCAAATTGCGGATATAGCACTTGAATGGACAGTTGTTTTCAGCGATCTGCAGTTTAAAACACTGTCTTGTATTTGTTCTTTTTGAGATAGTGTTGCTGGGGTTTGTACCAATTCATGGACTCTCTGCTGCTTATGTGGATTGGTTTCCGCAGGATTCAATAACACATCTCCCACATGACAATACTATACCTTCTACTTTTGTCCAATCGACTTCATTTCCATACAATTATTATTAGGTTATTACAGTTGTAACTCATCCTAATCATAGTCACTATCTGATCTTCTCGTATGAACTGTTTTCAGTCATGTATCTTGTGGTTGTAAGTTAGACATGATAGTAGATTTATTTCAATGTTTTTATTACTATTTGGGGACTACGATTGTTGGTCGATTTGGTGGATAGAGTATCACTCATAACCAGATATGGAAATTACTCAAGTATCAACTACAGTACTTTGTTGTTCAAATCTACTTTATATTTAGTTAATTGTCAATACCCTGTTTTCCCTTTTCATATGCCCTTGATAGTTAAATGTCAAATAATTTTTTAATTTCAAATTGTGAAATAGCGAAATTGTTTTCTATAATCAGCATTATTTTTATTTTTTTTTACTCTTCCCTATGATGAACTATTGGTTATTTTTCATCTGAAGGATGAAGAGAGTAAGCTTTACACAGGAGATGGCTCGGTTGACTTTAAAGGGAGACCCGTGCTTAAGCAGAATACTGGCAACTGGAAAGCTTGTCCATTTATCCTAGGTAAGCCTTTTCATTTCACTTATGTAACAAATATTTATTTATTTTCTAAAGTTGAACTCATATGTGATATGAAACACAGGAAATGAGTGCTGTGAACGTTTGGCATACTACGGCATTGCAACAAATCTTGTTACCTATCTTACTCGCAAGCTACATGAAGGAAATGTCTCTGCGGCAAGACACGTCACTACTTGGCAAGGCACTTGTTACCTTGCACCTCTCATTGGAGCAGTTCTAGCAGATTCTTACTGGGGACGATACTGGACAATTGCCATTTTCTCCATGATTTACTTCATTGTAATTATAAACCAAGATATTTTTATTCTCCTATTTATAAAATTCTCTACACACATTTCTCCTATGATATACTGCTGGCTATGCATTATATAGTATCCTACATAATGTAATTTGTGATGGTAATAGGATGTCATCAAACCATTTCTAAATCTTCTTTATATGGGGAAGTTAAATTCTTTTATACATTTTATAGTTATAAGAAACAAATATTATGGTGCTGAAGAAAAATGGAAATGGGAGAATCCAAAAACCAGTTTTGAGTGTACTATGATCCAAACTTATTCCTTCTCGAGCACCGACTATAATACTCAAATTCATTCCCACATTTGAAAAGTTATAGGGTTAATATTAGGAACAGTAGGTGTCTGTATCTGCTTGATGGTATAATTGTATTCTCATCATTTTGTTTTTATGTGCATCATTTTCATCTACATGCTTTATATTCAAATGTCTTTACATGTTTTAATATGTAAAATTGTTGTCTCGTGCAGGGAATGGGTACATTAACTCTTTCTGCATCTATTCCAGCATTGAAGCCTGCTGAGTGTTTGGGTGCTGCATGCCCTCCAGCTACTCCTGCACAATATGCTGTGTTTTTCATTGGTCTCTACCTGATTGCGCTTGGGACTGGTGGCATTAAACCATGTGTGTCCTCTTTTGGGGCAGATCAGTTTGATGATACTGATCCCCGGGAAAGGATTAAGAAGGGATCATTTTTCAACTGGTTTTACTTTTCTATCAACATAGGAGCCCTTGTATCAAGCAGTTTTATTGTGTGGATTCAAGAAAATGCAGGCTGGGGTCTTGGATTTGGCATTCCTGCTTTATTTATGGGATTAGCCATCGGAAGTTTCTTTTTAGGCACACCCCTCTATAGGTTTCAAAAACCAGGGGGAAGCCCTCTTACAAGAATGTGCCAGGTTGTGGCAGCATCTTTTCGGAAGCGGAATCTGGATGTCCCTGAGGATAGTAGTCTCTTGTACGAAACGGAAGACAAGAGCTCTGCAATTGAAGGAAGTCGGAAATTAGAGCATAGTGATGAACTGAGGTGATTATTCCCTTACTTTAAATTTAATGTTGTAATGTTCTCAACCTTGGTCACACTTGCAAAAAACAAGGGAGTATGTTCTGTGAAAAATAACTTATTCCCAATATTCCTGTTTAAGTGTTGCACGCCTTCCCACCAAATTCGTAGTTTATTGATTTAGAGTAATGTAATTTCAAATGTAAGCCCTACTCTAATGTTAAAAAAATGGAAGTTGTATATGTAAGGGTCCAGTTGGTCTTTAAAAAGCCTTGTCTGTCCCACCTGACAATGACTGATAGGATAGGATACCTAATATCATCTAACTTACTCTAGTGTTTGAAGTTCATAACAGAATAACAGATAGCTGAACACTAACTATCCGACCATGCACTCTCATCAGATGATATCCGTATTGCACACTATTGAGCAATCATACCCTTTTATAACCCTTCCGGCGTCTCTTTTTCTTCTAAAGGGCACTCGCCATTATTGTTCCCCATAGGCTGATATCCCCTCGTTAAACTCTAGATCTGTCACAATCATCAAAGTTGGAGTACTATTTAGAGAGAACATGCAATTTGGTTTTACACATCTTTAGCCAAAATTTCAATGGTGCAGGTATTTCCCTAGTTTTTTGACACAAGGTTTTCACTGATTAAACTATCACCATTTTTGATTTTTTTTGGCTAATACCAGCAACCTACTGTTTCAAAATTTCACGGGGAACCCTGGATGGGATAATAACCTTTGGATGGTATAAATGTTGCTAGATTTATGATATTTCTTTCATTCACACATTCTGTATGAATTGCGTTGCTTTTGAGATCTATGATTTATTGGAAAAAAATTTCTTCTTTGCACTTATATTTGCCAGTGTGTTGCCGTATTTGCATTTTATATGAAAGCATATTTTTTTTATCCTGAAGACTGATCACTTGTTCCCTATATCAAGTTATTGTGTCCCCTAATTTTCTTGCCTAAACGATCACAATTAGACATTTATGTTGAACATTTTAGATTTTTCCTTTATCGCGCAACTTTGCACATAATCTACCTATCTGGATTGTAAGAATTTACTTTACAAGCTTTATTTACTTTCTCTCAAAAAGAAAAAAAGCTTTATTTACTTCGGACTTGCTATCTTTAATTACTAGACTGTTGTCAGGTTTTCTCTTTTGAGTTGGCTAATGGCTGATTCATTGTTTTCTTGCTTCTCTTTTTCCGTTTTCAAGGAATGTTATTGTCATGGACAGTTCTGTAGGATAGACTGCATGTAAACAATTTTCTCTTTGGAAGTCTTTAATAGGTTGAGAAATCCTCTGGTAAAAAATTTCTAATATTTAGCTTGTGTCCTAATAATAATTTGTGTTGATATCAATAAAGGCTTAAGTATGCTTACTTGCTTCAGAAGATTTCACACACTCATTAACAGGGCTTTCTACTTTCCTTTGTTTTAATGAAGGTGTCTTGACAGAGCAGCTGTAGTCTCTGATGCTGAGAGGAAAAGTGGTGACTATTCTAACCTTTGGAGACTTTGCACTGTGACACAGGTGGAGGAATTGAAAATCTTGATCCGCATGTTTCCAGTTTGGGCTACTGGCATTATTTTTTCTGCTGTCTATGCCCAGATGTCAACATTGTTTGTGGAACAAGGAACTATGATGAACACTAGTATCGGTTCTTTCAAAATCCCACCAGCTTCCCTCTCAACTTTTGATGTAATTAGCGTTATTTTCTGGGTCCCTGTCTATGACAGGTTTATAGTTCCAATTGCAAGGAAATTTACTGGCAAAGAAAGGGGCTTTTCGGAGTTGCAAAGAATGGGAATTGGCCTTTTTATTTCTATCTTGTGCATGTCAGCAGCTGCTGTTTTGGAGATTAAACGTCTGCAGATTGCGAACGAGCTTGGGCTTGTGGATGAACCTGTCCCTGTACCCCTTACTATACTATGGCAAATCCCTCAGTATTTCTTATTGGGAGCAGCAGAAGTATTCACATTCGTGGGGCAGCTTGAGTTCTTCTATGACCAATCTCCAGATGCCATGCGAAGTTTATGCAGTGCTTTGTCACTTCTGACTACTTCACTGGGAAATTACTTGAGTTCTTTCATTCTCACTGTGGTAACTTACTTCTCTACACGAGGGGGAAATCCTGGATGGATTCCAGATAATTTGAATGGAGGTCATCTCGATTACTTTTTCTGGCTTTTAGCTGGACTTAGCTTCTTAAATATGTTGATGTACACAGTTGTTGCCAAAAGATACAAGAAAAAGAAGGCTTCTTAA
Protein sequence

>MS.gene34993.t1

MGSVEEDSSRTLEEALVVQDEESKLYTGDGSVDFKGRPVLKQNTGNWKACPFILGNECCERLAYYGIATNLVTYLTRKLHEGNVSAARHVTTWQGTCYLAPLIGAVLADSYWGRYWTIAIFSMIYFIGMGTLTLSASIPALKPAECLGAACPPATPAQYAVFFIGLYLIALGTGGIKPCVSSFGADQFDDTDPRERIKKGSFFNWFYFSINIGALVSSSFIVWIQENAGWGLGFGIPALFMGLAIGSFFLGTPLYRFQKPGGSPLTRMCQVVAASFRKRNLDVPEDSSLLYETEDKSSAIEGSRKLEHSDELRCLDRAAVVSDAERKSGDYSNLWRLCTVTQVEELKILIRMFPVWATGIIFSAVYAQMSTLFVEQGTMMNTSIGSFKIPPASLSTFDVISVIFWVPVYDRFIVPIARKFTGKERGFSELQRMGIGLFISILCMSAAAVLEIKRLQIANELGLVDEPVPVPLTILWQIPQYFLLGAAEVFTFVGQLEFFYDQSPDAMRSLCSALSLLTTSLGNYLSSFILTVVTYFSTRGGNPGWIPDNLNGGHLDYFFWLLAGLSFLNMLMYTVVAKRYKKKKAS