AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene025801

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025801.t1 MTR_5g012290 98.477 591 9 0 1 591 1 591 0.0 1199
MS.gene025801.t1 MTR_5g012270 74.443 583 145 3 1 580 1 582 0.0 905
MS.gene025801.t1 MTR_4g101380 71.717 594 164 4 1 591 1 593 0.0 859
MS.gene025801.t1 MTR_4g114340 56.818 572 221 9 11 573 8 562 0.0 572
MS.gene025801.t1 MTR_5g085850 50.624 561 250 5 15 570 18 556 0.0 526
MS.gene025801.t1 MTR_4g015080 45.422 557 292 8 17 570 24 571 2.34e-169 494
MS.gene025801.t1 MTR_7g067010 45.422 557 292 8 17 570 14 561 1.30e-165 484
MS.gene025801.t1 MTR_3g462710 44.086 558 300 7 17 570 14 563 6.63e-161 472
MS.gene025801.t1 MTR_5g055000 41.741 563 319 7 25 583 16 573 7.38e-154 454
MS.gene025801.t1 MTR_3g112460 40.106 566 319 9 17 579 13 561 4.80e-149 442
MS.gene025801.t1 MTR_3g112470 39.510 572 325 10 17 584 13 567 4.78e-145 431
MS.gene025801.t1 MTR_3g112450 39.755 571 321 8 14 576 10 565 7.76e-144 428
MS.gene025801.t1 MTR_7g088825 37.786 569 339 6 23 588 18 574 9.07e-142 424
MS.gene025801.t1 MTR_7g098200 40.242 579 326 8 17 588 19 584 1.33e-140 421
MS.gene025801.t1 MTR_7g098230 39.680 562 323 7 34 590 33 583 2.28e-137 412
MS.gene025801.t1 MTR_7g098200 39.724 579 319 9 17 588 19 574 9.35e-136 408
MS.gene025801.t1 MTR_1g041835 39.580 571 333 5 17 584 17 578 2.54e-134 404
MS.gene025801.t1 MTR_1g075440 38.779 557 330 5 17 570 18 566 2.61e-134 404
MS.gene025801.t1 MTR_7g098040 39.049 589 335 9 7 588 18 589 1.36e-133 404
MS.gene025801.t1 MTR_7g010820 38.291 585 341 6 11 583 10 586 2.54e-132 399
MS.gene025801.t1 MTR_1g041815 39.145 585 340 6 7 588 11 582 2.37e-131 397
MS.gene025801.t1 MTR_7g005930 36.625 557 338 6 14 567 22 566 1.75e-130 394
MS.gene025801.t1 MTR_3g462710 44.156 462 246 7 113 570 1 454 3.06e-130 389
MS.gene025801.t1 MTR_4g098800 36.380 569 342 7 7 567 16 572 1.30e-129 392
MS.gene025801.t1 MTR_1g042310 37.743 567 338 7 7 570 10 564 1.82e-129 392
MS.gene025801.t1 MTR_7g088790 37.273 550 339 5 24 570 26 572 3.32e-129 392
MS.gene025801.t1 MTR_5g014150 36.678 578 355 6 11 583 28 599 8.75e-129 390
MS.gene025801.t1 MTR_7g098160 37.801 582 342 8 7 582 17 584 1.25e-128 390
MS.gene025801.t1 MTR_4g107670 38.435 575 318 10 17 571 14 572 1.45e-128 389
MS.gene025801.t1 MTR_4g098800 36.380 569 342 7 7 567 81 637 1.70e-128 392
MS.gene025801.t1 MTR_1g041875 38.600 557 324 6 17 570 19 560 4.41e-128 388
MS.gene025801.t1 MTR_7g088820 34.729 573 365 7 25 591 23 592 1.27e-127 387
MS.gene025801.t1 MTR_3g100980 37.993 558 324 7 29 578 18 561 3.76e-127 385
MS.gene025801.t1 MTR_7g098090 38.031 589 336 10 7 582 17 589 4.57e-127 386
MS.gene025801.t1 MTR_2g005130 37.370 578 327 10 3 570 11 563 8.22e-127 385
MS.gene025801.t1 MTR_4g019580 37.919 567 333 11 10 571 18 570 6.61e-126 383
MS.gene025801.t1 MTR_7g065080 37.919 567 327 11 10 571 13 559 1.89e-125 381
MS.gene025801.t1 MTR_7g098180 36.473 584 355 6 5 582 9 582 2.69e-125 382
MS.gene025801.t1 MTR_8g469310 37.801 582 334 5 4 570 3 571 2.76e-124 378
MS.gene025801.t1 MTR_3g069500 38.137 569 327 10 6 570 13 560 3.77e-124 378
MS.gene025801.t1 MTR_7g013270 35.144 589 357 8 8 587 71 643 4.15e-124 380
MS.gene025801.t1 MTR_7g098220 37.390 567 340 6 19 580 22 578 1.25e-123 377
MS.gene025801.t1 MTR_1g041885 39.645 507 288 6 50 553 5 496 3.12e-123 374
MS.gene025801.t1 MTR_0294s0020 38.394 573 318 9 11 578 15 557 4.69e-123 374
MS.gene025801.t1 MTR_3g069420 36.189 572 344 9 6 570 12 569 6.01e-123 375
MS.gene025801.t1 MTR_1g042310 37.736 530 319 6 44 570 6 527 1.23e-122 373
MS.gene025801.t1 MTR_4g033325 37.931 580 325 10 4 578 8 557 8.12e-122 371
MS.gene025801.t1 MTR_1g042310 37.786 524 315 6 50 570 5 520 3.65e-121 369
MS.gene025801.t1 MTR_3g100980 36.177 586 324 8 29 578 18 589 4.16e-121 370
MS.gene025801.t1 MTR_5g038380 38.850 574 318 10 17 572 18 576 1.26e-120 369
MS.gene025801.t1 MTR_1g116930 35.951 573 349 9 17 586 14 571 2.55e-120 368
MS.gene025801.t1 MTR_3g069440 37.282 574 339 10 17 586 23 579 7.29e-120 367
MS.gene025801.t1 MTR_5g038060 36.145 581 347 10 1 570 10 577 7.64e-120 368
MS.gene025801.t1 MTR_4g033315 38.146 561 314 9 17 572 21 553 1.16e-119 365
MS.gene025801.t1 MTR_4g033310 38.146 561 314 9 17 572 21 553 1.16e-119 365
MS.gene025801.t1 MTR_1g085090 36.028 569 328 11 25 583 17 559 3.17e-119 366
MS.gene025801.t1 MTR_7g088820 34.972 529 335 7 69 591 5 530 3.43e-119 363
MS.gene025801.t1 MTR_3g072300 36.972 568 340 10 17 577 14 570 3.66e-119 365
MS.gene025801.t1 MTR_2g017750 36.842 570 343 11 17 572 24 590 5.87e-119 365
MS.gene025801.t1 MTR_8g087810 37.716 578 343 10 17 580 11 585 1.73e-118 363
MS.gene025801.t1 MTR_7g111260 36.106 565 335 8 25 584 17 560 5.31e-118 362
MS.gene025801.t1 MTR_8g087780 37.349 581 340 11 17 580 11 584 1.25e-117 361
MS.gene025801.t1 MTR_7g006540 36.842 570 336 6 22 576 58 618 2.24e-117 362
MS.gene025801.t1 MTR_3g005010 38.380 568 306 11 10 570 13 543 6.85e-117 358
MS.gene025801.t1 MTR_7g098220 37.269 542 325 6 44 580 3 534 1.55e-116 357
MS.gene025801.t1 MTR_4g107580 32.810 573 366 7 30 588 27 594 1.40e-114 354
MS.gene025801.t1 MTR_4g033375 38.462 507 282 7 12 515 17 496 6.17e-113 347
MS.gene025801.t1 MTR_8g469480 35.560 554 334 9 30 570 41 584 6.58e-113 350
MS.gene025801.t1 MTR_8g038880 36.140 570 331 8 22 578 13 562 8.73e-113 348
MS.gene025801.t1 MTR_3g014790 35.957 559 331 7 25 576 15 553 1.36e-111 345
MS.gene025801.t1 MTR_4g033330 37.818 550 309 8 8 552 12 533 5.38e-111 342
MS.gene025801.t1 MTR_7g088820 35.477 482 302 7 116 591 4 482 5.32e-110 338
MS.gene025801.t1 MTR_4g107510 32.131 582 377 7 2 571 10 585 8.66e-109 339
MS.gene025801.t1 MTR_4g107530 31.156 597 382 10 7 584 7 593 1.41e-108 338
MS.gene025801.t1 MTR_4g123537 35.642 592 353 10 7 591 21 591 3.27e-108 338
MS.gene025801.t1 MTR_4g033395 38.462 507 282 7 12 515 17 496 4.09e-108 334
MS.gene025801.t1 MTR_7g098200 38.622 479 278 7 115 588 3 470 1.35e-107 332
MS.gene025801.t1 MTR_7g065080 37.551 490 282 10 86 571 3 472 3.15e-107 332
MS.gene025801.t1 MTR_8g469470 33.692 558 350 7 30 574 35 585 5.86e-106 331
MS.gene025801.t1 MTR_7g098150 39.333 450 253 6 7 451 17 451 1.09e-99 311
MS.gene025801.t1 MTR_4g033325 37.288 472 261 10 112 578 18 459 5.36e-97 304
MS.gene025801.t1 MTR_5g038190 32.000 550 357 8 30 570 27 568 9.03e-95 301
MS.gene025801.t1 MTR_2g101590 32.793 555 340 13 29 567 28 565 1.35e-94 303
MS.gene025801.t1 MTR_4g033325 37.723 448 253 9 136 578 7 433 1.46e-94 296
MS.gene025801.t1 MTR_4g033385 36.632 475 269 8 109 578 13 460 2.49e-94 297
MS.gene025801.t1 MTR_4g011280 30.986 568 361 12 29 583 34 583 2.07e-92 296
MS.gene025801.t1 MTR_2g101640 32.130 554 345 11 29 567 25 562 4.45e-91 293
MS.gene025801.t1 MTR_2g101610 31.304 575 355 14 14 567 11 566 1.45e-90 292
MS.gene025801.t1 MTR_8g103233 32.477 545 346 8 29 564 19 550 1.80e-89 288
MS.gene025801.t1 MTR_2g101650 28.843 579 385 11 25 590 22 586 2.93e-89 288
MS.gene025801.t1 MTR_1g026740 31.826 553 359 11 22 567 12 553 8.92e-89 286
MS.gene025801.t1 MTR_2g093180 33.043 575 347 11 8 571 2 549 5.06e-88 283
MS.gene025801.t1 MTR_2g093160 31.588 573 357 12 8 571 2 548 2.06e-87 281
MS.gene025801.t1 MTR_1g026750 32.671 554 347 12 25 567 16 554 5.25e-85 276
MS.gene025801.t1 MTR_4g024930 30.931 569 353 10 5 567 18 552 2.17e-84 274
MS.gene025801.t1 MTR_4g107610 29.930 568 376 11 23 580 27 582 2.28e-80 265
MS.gene025801.t1 MTR_1g009200 30.996 542 353 10 29 561 29 558 1.03e-79 263
MS.gene025801.t1 MTR_2g101560 30.594 572 363 15 14 567 11 566 1.95e-79 263
MS.gene025801.t1 MTR_7g051880 33.573 557 324 12 14 567 12 525 2.03e-79 260
MS.gene025801.t1 MTR_7g064780 29.623 584 382 12 16 585 15 583 5.72e-79 261
MS.gene025801.t1 MTR_2g093640 30.648 571 365 11 8 571 2 548 6.65e-79 259
MS.gene025801.t1 MTR_6g008690 32.007 553 316 12 43 572 23 538 9.24e-79 259
MS.gene025801.t1 MTR_7g052600 33.993 556 323 12 14 567 12 525 1.25e-78 258
MS.gene025801.t1 MTR_1g026770 31.193 545 358 11 29 567 17 550 1.43e-78 259
MS.gene025801.t1 MTR_7g051830 33.333 558 324 12 14 567 12 525 3.03e-76 251
MS.gene025801.t1 MTR_7g064800 29.310 580 387 9 23 587 22 593 9.55e-75 249
MS.gene025801.t1 MTR_1g057460 29.875 559 340 15 25 567 42 564 2.85e-74 248
MS.gene025801.t1 MTR_7g098210 30.957 533 271 12 46 571 1 443 1.10e-70 234
MS.gene025801.t1 MTR_1g057460 30.286 525 322 15 55 567 1 493 3.21e-70 235
MS.gene025801.t1 MTR_0236s0050 30.476 525 321 16 55 567 1 493 4.66e-66 224
MS.gene025801.t1 MTR_4g033310 38.710 279 161 3 297 572 218 489 4.36e-59 205
MS.gene025801.t1 MTR_4g033310 39.888 178 96 2 17 194 21 187 1.05e-31 129
MS.gene025801.t1 MTR_1g009170 26.683 401 236 10 154 549 9 356 2.69e-36 140
MS.gene025801.t1 MTR_3g065350 39.634 164 92 2 340 503 1 157 6.45e-30 115
MS.gene025801.t1 MTR_4g033390 32.323 99 60 2 487 583 30 123 1.49e-13 68.2
MS.gene025801.t1 MTR_2g093650 26.667 195 85 5 355 548 41 178 2.54e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025801.t1 AT1G12110 62.735 585 210 5 3 583 2 582 0.0 738
MS.gene025801.t1 AT2G26690 55.950 563 227 6 11 567 8 555 0.0 590
MS.gene025801.t1 AT2G26690 55.140 535 219 6 39 567 3 522 0.0 551
MS.gene025801.t1 AT2G26690 54.857 525 216 6 49 567 1 510 0.0 537
MS.gene025801.t1 AT3G21670 51.510 563 247 6 14 570 16 558 0.0 532
MS.gene025801.t1 AT5G01180 42.729 557 308 6 17 570 15 563 3.14e-164 480
MS.gene025801.t1 AT5G01180 42.729 557 308 6 17 570 15 563 3.14e-164 480
MS.gene025801.t1 AT5G01180 42.729 557 308 6 17 570 15 563 3.14e-164 480
MS.gene025801.t1 AT3G54140 42.504 567 312 7 7 570 8 563 5.43e-162 475
MS.gene025801.t1 AT3G54140 42.504 567 312 7 7 570 8 563 5.43e-162 475
MS.gene025801.t1 AT2G02040 42.218 559 314 5 17 573 31 582 8.11e-158 464
MS.gene025801.t1 AT1G68570 42.557 571 314 8 7 570 5 568 1.83e-144 431
MS.gene025801.t1 AT1G68570 43.970 539 290 7 39 570 5 538 4.42e-143 426
MS.gene025801.t1 AT1G62200 38.938 565 329 6 6 565 30 583 6.85e-135 406
MS.gene025801.t1 AT1G62200 37.669 592 328 8 6 565 44 626 9.53e-131 397
MS.gene025801.t1 AT1G62200 37.669 592 328 8 6 565 30 612 1.07e-130 396
MS.gene025801.t1 AT1G59740 37.633 566 334 7 14 573 28 580 3.45e-130 394
MS.gene025801.t1 AT5G46040 37.063 572 344 8 17 583 17 577 1.25e-124 379
MS.gene025801.t1 AT5G46050 36.585 574 346 8 17 585 17 577 3.98e-124 378
MS.gene025801.t1 AT2G02020 36.813 546 301 6 17 561 32 534 6.45e-124 376
MS.gene025801.t1 AT2G37900 36.444 568 337 7 8 570 18 566 7.73e-124 377
MS.gene025801.t1 AT4G21680 37.943 564 330 6 17 569 18 572 1.82e-123 377
MS.gene025801.t1 AT3G53960 38.004 571 332 10 8 570 17 573 2.66e-123 377
MS.gene025801.t1 AT1G32450 36.380 558 345 7 17 567 27 581 5.42e-123 376
MS.gene025801.t1 AT1G69850 37.719 570 338 5 16 571 14 580 1.00e-122 374
MS.gene025801.t1 AT5G19640 37.201 543 317 7 28 567 60 581 7.73e-120 368
MS.gene025801.t1 AT1G33440 37.997 579 329 11 17 586 28 585 2.85e-119 366
MS.gene025801.t1 AT1G72140 36.458 576 319 8 9 573 16 555 8.05e-119 363
MS.gene025801.t1 AT3G54450 34.568 567 348 7 22 583 7 555 2.57e-118 362
MS.gene025801.t1 AT1G27040 38.959 557 325 7 16 569 12 556 3.59e-118 362
MS.gene025801.t1 AT1G27040 38.393 560 324 7 16 569 16 560 3.78e-118 362
MS.gene025801.t1 AT2G40460 38.028 568 328 10 7 570 8 555 1.18e-116 359
MS.gene025801.t1 AT5G13400 36.054 588 354 9 9 587 47 621 1.20e-116 360
MS.gene025801.t1 AT1G27040 39.286 532 308 7 41 569 9 528 6.74e-113 347
MS.gene025801.t1 AT1G69870 35.159 566 343 11 29 585 53 603 1.57e-112 349
MS.gene025801.t1 AT1G22540 38.640 559 312 8 17 570 20 552 3.10e-109 339
MS.gene025801.t1 AT5G62730 35.512 566 333 8 17 573 46 588 1.00e-108 338
MS.gene025801.t1 AT2G37900 36.016 497 295 6 79 571 11 488 1.02e-108 335
MS.gene025801.t1 AT1G72120 35.902 571 330 10 8 570 10 552 7.35e-107 333
MS.gene025801.t1 AT2G02020 34.982 546 290 9 17 561 32 513 2.40e-106 330
MS.gene025801.t1 AT1G22570 36.316 570 328 10 12 570 15 560 8.17e-106 330
MS.gene025801.t1 AT5G62730 35.455 550 323 8 33 573 3 529 9.46e-106 329
MS.gene025801.t1 AT1G72125 34.555 573 339 11 8 570 10 556 9.09e-105 327
MS.gene025801.t1 AT1G22550 34.851 571 336 9 11 570 14 559 1.05e-104 327
MS.gene025801.t1 AT1G72130 36.511 556 298 11 25 570 23 533 1.50e-103 323
MS.gene025801.t1 AT1G18880 31.532 555 358 8 30 571 22 567 5.04e-101 318
MS.gene025801.t1 AT5G46050 36.134 476 286 8 115 585 3 465 7.15e-98 306
MS.gene025801.t1 AT1G22570 36.029 544 313 10 38 570 4 523 3.02e-97 306
MS.gene025801.t1 AT1G52190 31.712 555 360 7 25 567 19 566 5.71e-97 308
MS.gene025801.t1 AT5G62680 32.500 560 346 11 30 570 46 592 5.29e-95 303
MS.gene025801.t1 AT3G47960 32.914 556 347 10 30 570 64 608 1.05e-94 303
MS.gene025801.t1 AT3G25260 33.394 554 317 11 17 567 11 515 2.23e-94 299
MS.gene025801.t1 AT3G16180 31.866 568 367 9 13 567 5 565 2.52e-94 301
MS.gene025801.t1 AT3G25280 33.874 555 321 12 16 567 10 521 1.90e-89 286
MS.gene025801.t1 AT3G45660 31.444 547 344 9 46 590 40 557 1.11e-88 285
MS.gene025801.t1 AT3G45660 31.444 547 344 9 46 590 40 557 1.11e-88 285
MS.gene025801.t1 AT3G45660 31.444 547 344 9 46 590 61 578 3.82e-88 285
MS.gene025801.t1 AT1G27080 32.000 575 356 12 21 585 8 557 4.44e-88 284
MS.gene025801.t1 AT3G45710 29.331 583 379 12 14 588 3 560 3.36e-83 271
MS.gene025801.t1 AT1G69860 30.965 549 353 10 30 571 21 550 8.28e-82 267
MS.gene025801.t1 AT3G45650 29.676 556 362 9 23 573 15 546 2.43e-81 266
MS.gene025801.t1 AT3G45680 29.277 567 368 10 26 587 19 557 1.78e-79 261
MS.gene025801.t1 AT1G72130 35.535 439 240 9 141 569 9 414 3.80e-79 256
MS.gene025801.t1 AT1G72130 35.535 439 240 9 141 569 9 414 3.80e-79 256
MS.gene025801.t1 AT5G14940 31.627 547 321 11 43 567 23 538 2.65e-78 258
MS.gene025801.t1 AT1G27080 32.342 538 329 12 58 585 3 515 1.39e-77 255
MS.gene025801.t1 AT3G45720 28.546 564 365 11 15 570 7 540 2.09e-77 256
MS.gene025801.t1 AT3G01350 30.900 589 346 11 24 583 4 560 8.28e-77 254
MS.gene025801.t1 AT5G28470 29.159 559 372 9 25 573 15 559 2.16e-76 253
MS.gene025801.t1 AT3G45650 28.351 582 362 10 23 573 15 572 2.65e-76 253
MS.gene025801.t1 AT3G45700 29.160 583 359 15 16 584 4 546 3.95e-75 249
MS.gene025801.t1 AT5G28470 28.980 559 371 10 25 573 15 557 2.26e-73 245
MS.gene025801.t1 AT3G45690 28.597 549 324 13 26 571 17 500 7.69e-68 229
MS.gene025801.t1 AT5G11570 26.816 537 304 10 37 567 23 476 4.59e-50 180
MS.gene025801.t1 AT2G38100 26.792 530 336 13 55 573 2 490 2.04e-43 162
MS.gene025801.t1 AT2G38100 26.792 530 336 13 55 573 18 506 4.15e-43 162
MS.gene025801.t1 AT2G38100 26.792 530 336 13 55 573 24 512 4.29e-43 162

Find 154 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCGCAATCCATGGTTTATT+TGG 0.146472 5.3:+5501341 None:intergenic
CTCCTTTATGCTCTGTCTAT+TGG 0.183421 5.3:-5505011 MS.gene025801:CDS
TTAGAGTCTTCTTTGCATTT+TGG 0.212251 5.3:+5504407 None:intergenic
ATGTGGCATCCTTTGCTTCT+TGG 0.223376 5.3:+5503923 None:intergenic
TCAGATTGCGGTCGTGTTTA+TGG 0.224116 5.3:-5504033 MS.gene025801:CDS
ACTCGGCATCGCCGTTAATT+TGG 0.225881 5.3:-5505107 MS.gene025801:CDS
TCCTTTATGCTCTGTCTATT+GGG 0.231899 5.3:-5505010 MS.gene025801:CDS
TGGAGAGGCCTTTATGTATA+TGG 0.257387 5.3:-5501498 MS.gene025801:CDS
ATCCTTTGCTTCTTGGTCTT+AGG 0.272928 5.3:+5503930 None:intergenic
AATGTTGTTACTAATTTCTT+AGG 0.273061 5.3:-5505037 MS.gene025801:CDS
CTTGACCGGTACTATGCATT+TGG 0.289091 5.3:-5505077 MS.gene025801:CDS
ATGGATTGTCCAAAACATTA+TGG 0.311360 5.3:+5501883 None:intergenic
CATTATGGTTGTGGCCCATA+TGG 0.330752 5.3:+5501898 None:intergenic
TATAAATGTGGTGATATATT+TGG 0.333642 5.3:-5501261 MS.gene025801:CDS
TTTCGTAAGCATAGGGTCTT+TGG 0.338269 5.3:-5504207 MS.gene025801:CDS
AAATCTAGTGTCTCTGGCTT+TGG 0.347040 5.3:-5504302 MS.gene025801:CDS
GGGCCACAACCATAATGTTT+TGG 0.348324 5.3:-5501892 MS.gene025801:CDS
AGATGTGGAAGAAGTTAAAA+TGG 0.350382 5.3:-5501936 MS.gene025801:CDS
TTGCTTGATCCGGTATTTGC+GGG 0.367014 5.3:+5504076 None:intergenic
AAGAAGTTAAAATGGTAATA+AGG 0.380191 5.3:-5501928 MS.gene025801:CDS
TTCTTGAGCACACTCTCAAT+AGG 0.380892 5.3:-5501413 MS.gene025801:CDS
AGATGCCATTGAGTGTGTTT+TGG 0.390364 5.3:-5501550 MS.gene025801:CDS
TGCTGAGGCGGGCATAGAAT+TGG 0.392359 5.3:-5501201 MS.gene025801:CDS
CCCTTGTAATCAGATGCATC+TGG 0.396538 5.3:+5505214 None:intergenic
CAAGGTAGAGGTTGGGGTTA+CGG 0.404173 5.3:-5504149 MS.gene025801:CDS
AACTTCTTCCACATCTGTTA+AGG 0.406906 5.3:+5501943 None:intergenic
TCTTGAGCACACTCTCAATA+GGG 0.411173 5.3:-5501412 MS.gene025801:CDS
TCCGCGGCCGCCATGATATT+AGG 0.415550 5.3:-5505157 MS.gene025801:CDS
TAATAAGGATGTTACCCATA+TGG 0.419503 5.3:-5501913 MS.gene025801:CDS
CTCAGTAGTGTCCATGGTTG+CGG 0.432988 5.3:-5501642 MS.gene025801:CDS
CCCAGATGCATCTGATTACA+AGG 0.434717 5.3:-5505215 MS.gene025801:CDS
CAATCACAATCAAGGAGAAA+TGG 0.435261 5.3:-5501976 MS.gene025801:CDS
GAGATTATCTTACAATTGCT+TGG 0.439655 5.3:+5504748 None:intergenic
TTGACCGGTACTATGCATTT+GGG 0.441330 5.3:-5505076 MS.gene025801:CDS
TCAATGACGGTCTTCTTAAT+CGG 0.441765 5.3:-5501782 MS.gene025801:CDS
TGCCACATAGCAAACAGTTC+CGG 0.441974 5.3:-5503908 MS.gene025801:intron
TACATCACGGCCCTCGGCAC+CGG 0.448076 5.3:-5504332 MS.gene025801:CDS
GCCTCTACATTCCATGCATA+GGG 0.450174 5.3:-5501167 None:intergenic
TCCTAATATCATGGCGGCCG+CGG 0.451996 5.3:+5505156 None:intergenic
ACAAGGGCCGGCTGGCCGAC+AGG 0.455828 5.3:-5505198 MS.gene025801:CDS
GGTCGTAGAAAGGAACAGTT+AGG 0.460679 5.3:+5501750 None:intergenic
TTTCCCTTGTGTTGTAGGGA+GGG 0.463914 5.3:+5505243 None:intergenic
AGCAGACAGCAAGCAACTAT+TGG 0.464045 5.3:-5504372 MS.gene025801:CDS
AGATAACCAAGGTAGAGGTT+GGG 0.464346 5.3:-5504156 MS.gene025801:CDS
AATTTGGTCACATACTTGAC+CGG 0.465748 5.3:-5505091 MS.gene025801:CDS
GGAATGAAAACTATGAGTAC+AGG 0.465946 5.3:-5501440 MS.gene025801:CDS
TAATTGTCCCATATACATAA+AGG 0.467859 5.3:+5501490 None:intergenic
CTCAATGGCATCTTTGCCGT+TGG 0.474314 5.3:+5501560 None:intergenic
TGCTTGGACAGCTGCAAAGA+TGG 0.474359 5.3:+5504764 None:intergenic
AAGACCGTCATTGATGCTGC+TGG 0.476879 5.3:+5501791 None:intergenic
TGTCCGGTACCCGCAAATAC+CGG 0.478280 5.3:-5504085 MS.gene025801:CDS
CGCGGACCAACCACCGGTTG+TGG 0.478323 5.3:+5505174 None:intergenic
CACTTCTCCTCCTAATATCA+TGG 0.480052 5.3:+5505147 None:intergenic
GGTCTAAAATCTAGTGTCTC+TGG 0.480893 5.3:-5504308 MS.gene025801:CDS
ACCCAATAGACAGAGCATAA+AGG 0.482538 5.3:+5505009 None:intergenic
TACCGGATCAAGCAACTTGT+TGG 0.482750 5.3:-5504068 MS.gene025801:CDS
TTCTGATGACCAAGAAAAGA+AGG 0.483279 5.3:-5504261 MS.gene025801:CDS
TTGAAATTCGCACGATCACA+TGG 0.486954 5.3:-5501596 MS.gene025801:CDS
CCTTTACAACGCATTGGTGT+TGG 0.489948 5.3:-5501674 MS.gene025801:CDS
ATCTGATTACAAGGGCCGGC+TGG 0.490136 5.3:-5505206 MS.gene025801:CDS
CGAATGAAGCGGTCGTAGAA+AGG 0.491283 5.3:+5501740 None:intergenic
AATAAGGATGTTACCCATAT+GGG 0.493344 5.3:-5501912 MS.gene025801:CDS
GGAGAGGCCTTTATGTATAT+GGG 0.496953 5.3:-5501497 MS.gene025801:CDS
AGTCCTCTCAGTAGTGTCCA+TGG 0.500956 5.3:-5501648 MS.gene025801:CDS
TATTTGTGCGGTCGCAATTG+TGG 0.501020 5.3:-5504126 MS.gene025801:CDS
TTGTGGACCTGTCGGCCAGC+CGG 0.501509 5.3:+5505191 None:intergenic
CAAGTATGTGACCAAATTAA+CGG 0.502223 5.3:+5505096 None:intergenic
TAGGAGGAGAAGTGATGGAG+AGG 0.502676 5.3:-5505138 MS.gene025801:CDS
AAGATAACCAAGGTAGAGGT+TGG 0.503461 5.3:-5504157 MS.gene025801:CDS
TTCACTCCTTTACAACGCAT+TGG 0.504068 5.3:-5501680 MS.gene025801:CDS
TGTCCAAAACATTATGGTTG+TGG 0.504094 5.3:+5501889 None:intergenic
TTTATGCTCTGTCTATTGGG+TGG 0.509907 5.3:-5505007 MS.gene025801:CDS
CGGTCGTGTTTATGGCTGCT+TGG 0.510720 5.3:-5504025 MS.gene025801:CDS
TACCAACAAGTTGCTTGATC+CGG 0.510732 5.3:+5504066 None:intergenic
TCGTGTTTATGGCTGCTTGG+AGG 0.512042 5.3:-5504022 MS.gene025801:CDS
TACCGGAACTGTTTGCTATG+TGG 0.513274 5.3:+5503906 None:intergenic
CCAACACCAATGCGTTGTAA+AGG 0.515233 5.3:+5501674 None:intergenic
ACCAACCAAAACACACTCAA+TGG 0.517641 5.3:+5501545 None:intergenic
GTTGCTTGATCCGGTATTTG+CGG 0.518244 5.3:+5504075 None:intergenic
TTCTTCATTGCTCTATGAAG+AGG 0.518830 5.3:-5503973 MS.gene025801:CDS
TTTCTTTGTTGGGTCTGGAG+AGG 0.523163 5.3:-5501513 MS.gene025801:CDS
CTGGCCGACAGGTCCACAAC+CGG 0.525288 5.3:-5505187 MS.gene025801:CDS
GCACTTTACATCACGGCCCT+CGG 0.525416 5.3:-5504338 MS.gene025801:CDS
GACAAGAGACTTGCTGAGGC+GGG 0.533846 5.3:-5501212 MS.gene025801:CDS
ATTGCGGATAATCTTGATCA+AGG 0.535890 5.3:-5501326 MS.gene025801:CDS
GATAACCAAGGTAGAGGTTG+GGG 0.537914 5.3:-5504155 MS.gene025801:CDS
TGGTCTTAGGTGTTTCACAT+AGG 0.541798 5.3:+5503943 None:intergenic
CCTTGTAATCAGATGCATCT+GGG 0.541992 5.3:+5505215 None:intergenic
GGCGGCCGCGGACCAACCAC+CGG 0.543833 5.3:+5505168 None:intergenic
ATCACGGCCCTCGGCACCGG+TGG 0.545009 5.3:-5504329 MS.gene025801:CDS
ATTATGGTTGTGGCCCATAT+GGG 0.546937 5.3:+5501899 None:intergenic
CGTAACCCCAACCTCTACCT+TGG 0.549093 5.3:+5504150 None:intergenic
TGGCAGTGCAATCACAATCA+AGG 0.551937 5.3:-5501984 MS.gene025801:CDS
GATCCGGTATTTGCGGGTAC+CGG 0.554792 5.3:+5504082 None:intergenic
TTAGACAAAGCGGCAATCAA+AGG 0.554882 5.3:-5502016 MS.gene025801:CDS
GATATTAGGAGGAGAAGTGA+TGG 0.558978 5.3:-5505143 MS.gene025801:CDS
TATGAGTGCTGCCGCAACCA+TGG 0.562291 5.3:+5501631 None:intergenic
CACCTAAGACCAAGAAGCAA+AGG 0.564356 5.3:-5503932 MS.gene025801:CDS
TGCCTCTACATTCCATGCAT+AGG 0.564381 5.3:-5501168 None:intergenic
ACAACCATGGATTGTCACAT+TGG 0.565357 5.3:-5501827 MS.gene025801:CDS
AAGCATAGGGTCTTTGGCAG+CGG 0.567922 5.3:-5504201 MS.gene025801:CDS
ATGCATCTGATTACAAGGGC+CGG 0.568601 5.3:-5505210 MS.gene025801:CDS
TGTTCCAATGTGACAATCCA+TGG 0.571949 5.3:+5501823 None:intergenic
ACGACCGCAATCTGAGTCAA+AGG 0.573004 5.3:+5504041 None:intergenic
TCCAAATAAACCATGGATTG+CGG 0.574971 5.3:-5501342 MS.gene025801:CDS
GGACAAGAGACTTGCTGAGG+CGG 0.576506 5.3:-5501213 MS.gene025801:CDS
TCAAGATTATCCGCAATCCA+TGG 0.577407 5.3:+5501332 None:intergenic
CACAACCGGTGGTTGGTCCG+CGG 0.578072 5.3:-5505173 MS.gene025801:CDS
TAAGAAATTAGTAACAACAT+TGG 0.578419 5.3:+5505039 None:intergenic
GCAATCAAAGGCATAGAAAG+TGG 0.579246 5.3:-5502004 MS.gene025801:CDS
TATCTCTACCTTAACAGATG+TGG 0.585721 5.3:-5501951 MS.gene025801:CDS
ATTAGTAACAACATTGGCAG+AGG 0.586147 5.3:+5505045 None:intergenic
TTGCGACTGGTCGAATGAAG+CGG 0.586629 5.3:+5501729 None:intergenic
AGCACCCTCCCTACAACACA+AGG 0.588695 5.3:-5505247 MS.gene025801:CDS
TAGTCCTTTGACTCAGATTG+CGG 0.589065 5.3:-5504045 MS.gene025801:CDS
AGACCGTCATTGATGCTGCT+GGG 0.589637 5.3:+5501792 None:intergenic
TGCTAAGTGGTATGTGTACA+AGG 0.589791 5.3:-5501234 MS.gene025801:CDS
ACAGGTCCACAACCGGTGGT+TGG 0.591605 5.3:-5505180 MS.gene025801:CDS
AGAATGTTGTCATTTGAGCA+TGG 0.600950 5.3:+5501864 None:intergenic
ATGGAGAGGTTGACAACACT+CGG 0.600987 5.3:-5505124 MS.gene025801:CDS
ATTGCCCAAATGCATAGTAC+CGG 0.603355 5.3:+5505072 None:intergenic
ATACAAGATAACCAAGGTAG+AGG 0.606582 5.3:-5504161 MS.gene025801:CDS
ACCACCGGTTGTGGACCTGT+CGG 0.608628 5.3:+5505183 None:intergenic
TATATTTGGCTTGTGCTAAG+TGG 0.609309 5.3:-5501247 MS.gene025801:CDS
GTATTTAGCACTTTACATCA+CGG 0.617039 5.3:-5504345 MS.gene025801:CDS
TTGCGGATAATCTTGATCAA+GGG 0.620665 5.3:-5501325 MS.gene025801:CDS
GACTCTAGTGAACAATGTGA+CGG 0.622141 5.3:-5501366 MS.gene025801:CDS
ACTCTAGTGAACAATGTGAC+GGG 0.623386 5.3:-5501365 MS.gene025801:CDS
TCTGATGACCAAGAAAAGAA+GGG 0.624905 5.3:-5504260 MS.gene025801:CDS
CGGATAATCTTGATCAAGGG+AGG 0.625811 5.3:-5501322 MS.gene025801:CDS
ATAGAGCAATGAAGAATCAG+AGG 0.625823 5.3:+5503980 None:intergenic
GCCGACAGGTCCACAACCGG+TGG 0.626538 5.3:-5505184 MS.gene025801:CDS
CCTCTACATTCCATGCATAG+GGG 0.630402 5.3:-5501166 None:intergenic
CAGCACTCATAGAAATGAAG+CGG 0.633945 5.3:-5501619 MS.gene025801:CDS
CCCCTATGCATGGAATGTAG+AGG 0.633977 5.3:+5501166 None:intergenic
GAATGAAAACTATGAGTACA+GGG 0.638544 5.3:-5501439 MS.gene025801:CDS
GACAGCTGCAAAGATGGCAA+TGG 0.645630 5.3:+5504770 None:intergenic
TAGAGCAATGAAGAATCAGA+GGG 0.646481 5.3:+5503981 None:intergenic
AATCCCAGCAGCATCAATGA+CGG 0.648376 5.3:-5501795 MS.gene025801:CDS
TGACGGGTCCAAATAAACCA+TGG 0.653922 5.3:-5501349 MS.gene025801:CDS
GCGGCCGCCATGATATTAGG+AGG 0.655145 5.3:-5505154 MS.gene025801:CDS
TATGCTAAGTGCTATAAATG+TGG 0.657537 5.3:-5501273 MS.gene025801:CDS
AAACAGTTTCTTAGACAAAG+CGG 0.657671 5.3:-5502026 MS.gene025801:intron
AGTATCACAAGCAACAACCA+TGG 0.663164 5.3:-5501840 MS.gene025801:CDS
TTGGGGTTACGGTATTTGTG+CGG 0.666939 5.3:-5504138 MS.gene025801:CDS
CAATAGACAGAGCATAAAGG+AGG 0.685001 5.3:+5505012 None:intergenic
AAATTACTAAACAACTCACA+CGG 0.686574 5.3:-5501704 MS.gene025801:CDS
TTCTCCTCCTAATATCATGG+CGG 0.687568 5.3:+5505150 None:intergenic
GGGTACCGGACAAGAAAACA+AGG 0.694489 5.3:+5504096 None:intergenic
CCAGATGCATCTGATTACAA+GGG 0.704068 5.3:-5505214 MS.gene025801:CDS
CAAGGACAAGAGACTTGCTG+AGG 0.709240 5.3:-5501216 MS.gene025801:CDS
CAACCATGGACACTACTGAG+AGG 0.733442 5.3:+5501645 None:intergenic
GCACCCTCCCTACAACACAA+GGG 0.747611 5.3:-5505246 MS.gene025801:CDS
GTGTACATACAAGATAACCA+AGG 0.754045 5.3:-5504167 MS.gene025801:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTCATTTATTTATTTAT+TGG - chr5.3:5502803-5502822 MS.gene025801:intron 10.0%
!! TTTATATAATAGTATAGTAT+TGG - chr5.3:5503538-5503557 MS.gene025801:intron 10.0%
!!! AATTGCAAATTTTTTTAATA+AGG + chr5.3:5503614-5503633 None:intergenic 10.0%
!!! ATTAAAAAAATTTGCAATTT+TGG - chr5.3:5503615-5503634 MS.gene025801:intron 10.0%
!!! TTTTGCAATTTTTTTTAATA+GGG - chr5.3:5503788-5503807 MS.gene025801:intron 10.0%
!! AAAAAATTCCTTTCTTATTA+TGG - chr5.3:5501486-5501505 MS.gene025801:CDS 15.0%
!! AATCTACTTAATATACTTTA+AGG + chr5.3:5504093-5504112 None:intergenic 15.0%
!! AATTAATTCATTAATCTTCA+AGG + chr5.3:5504357-5504376 None:intergenic 15.0%
!! ATAAAGACATTTATCATTAT+TGG - chr5.3:5503325-5503344 MS.gene025801:intron 15.0%
!! TAAAGACATTTATCATTATT+GGG - chr5.3:5503326-5503345 MS.gene025801:intron 15.0%
!!! CTTTTGCAATTTTTTTTAAT+AGG - chr5.3:5503787-5503806 MS.gene025801:intron 15.0%
!!! TAAACCTTTATAATTTGTTT+GGG + chr5.3:5503163-5503182 None:intergenic 15.0%
!!! TTTATTAATTTGTAATTCAG+TGG + chr5.3:5504218-5504237 None:intergenic 15.0%
!!! TTTGCAATTTTTTTTAATAG+GGG - chr5.3:5503789-5503808 MS.gene025801:intron 15.0%
!!! TTTTATTTGAAAACAAAAGT+TGG - chr5.3:5502980-5502999 MS.gene025801:intron 15.0%
!! AAAACCAATCATAATTAATG+TGG + chr5.3:5501559-5501578 None:intergenic 20.0%
!! AAAATAGTACTAGAAAACAA+TGG + chr5.3:5501717-5501736 None:intergenic 20.0%
!! AAGAAGTTAAAATGGTAATA+AGG - chr5.3:5504491-5504510 MS.gene025801:intron 20.0%
!! AAGTTTCAAAAATCTAACTA+AGG - chr5.3:5503986-5504005 MS.gene025801:CDS 20.0%
!! AATATCAAAGAACTAAACAA+CGG + chr5.3:5501922-5501941 None:intergenic 20.0%
!! AATGTTGTTACTAATTTCTT+AGG - chr5.3:5501382-5501401 MS.gene025801:CDS 20.0%
!! AATTCCCAAACAAATTATAA+AGG - chr5.3:5503156-5503175 MS.gene025801:intron 20.0%
!! ACGAATGTATGTTTATATTA+GGG - chr5.3:5501943-5501962 MS.gene025801:CDS 20.0%
!! AGAATGAATAGAAAATTTAC+CGG + chr5.3:5502533-5502552 None:intergenic 20.0%
!! ATAACATATTTCTCTAAACA+TGG - chr5.3:5503758-5503777 MS.gene025801:intron 20.0%
!! ATGTAGAAAGAACAAATTAT+TGG - chr5.3:5503358-5503377 MS.gene025801:intron 20.0%
!! ATTAAGTAGATTGATTGAAA+GGG - chr5.3:5504101-5504120 MS.gene025801:CDS 20.0%
!! CATTAACTAAAAACAAAGAA+AGG + chr5.3:5504027-5504046 None:intergenic 20.0%
!! TAACATATTTCTCTAAACAT+GGG - chr5.3:5503759-5503778 MS.gene025801:intron 20.0%
!! TAAGAAATTAGTAACAACAT+TGG + chr5.3:5501383-5501402 None:intergenic 20.0%
!! TATTAAGTAGATTGATTGAA+AGG - chr5.3:5504100-5504119 MS.gene025801:CDS 20.0%
!! TGTAGAAAGAACAAATTATT+GGG - chr5.3:5503359-5503378 MS.gene025801:intron 20.0%
!!! CTAAACCTTTATAATTTGTT+TGG + chr5.3:5503164-5503183 None:intergenic 20.0%
!!! GTAACATTTTAAAACTTAGA+GGG + chr5.3:5503581-5503600 None:intergenic 20.0%
!!! GTTTTAAAATGTTACGATTT+TGG - chr5.3:5503586-5503605 MS.gene025801:intron 20.0%
!!! TTAGTTTTCCATAATAAGAA+AGG + chr5.3:5501497-5501516 None:intergenic 20.0%
!!! TTATAATTTGTTTGGGAATT+GGG + chr5.3:5503156-5503175 None:intergenic 20.0%
!!! TTGCAATTTTTTTTAATAGG+GGG - chr5.3:5503790-5503809 MS.gene025801:intron 20.0%
!!! TTTATAATTTGTTTGGGAAT+TGG + chr5.3:5503157-5503176 None:intergenic 20.0%
!!! TTTTTGAGGATTTAATTCAA+AGG + chr5.3:5501889-5501908 None:intergenic 20.0%
! AAATTACTAAACAACTCACA+CGG - chr5.3:5504715-5504734 MS.gene025801:intron 25.0%
! AACATATTTCTCTAAACATG+GGG - chr5.3:5503760-5503779 MS.gene025801:intron 25.0%
! ATAAACCACACATTATTAGT+TGG + chr5.3:5503496-5503515 None:intergenic 25.0%
! ATATCTGTCAAACAAAGAAT+GGG + chr5.3:5501625-5501644 None:intergenic 25.0%
! ATTAAGCTACTTAAACTAAG+AGG + chr5.3:5502673-5502692 None:intergenic 25.0%
! GACGAATGTATGTTTATATT+AGG - chr5.3:5501942-5501961 MS.gene025801:CDS 25.0%
! GTAAAAGCAATAATTTCGAA+AGG + chr5.3:5503941-5503960 None:intergenic 25.0%
! TAATTGTCCCATATACATAA+AGG + chr5.3:5504932-5504951 None:intergenic 25.0%
! TCTTTATTGTTAGTTGCATA+CGG + chr5.3:5503312-5503331 None:intergenic 25.0%
! TGACTCAAAATTGAATAGTT+TGG - chr5.3:5502935-5502954 MS.gene025801:intron 25.0%
! TGATCCACATTAATTATGAT+TGG - chr5.3:5501552-5501571 MS.gene025801:CDS 25.0%
! TTCTCTCAAAAAATAATGTG+TGG - chr5.3:5503515-5503534 MS.gene025801:intron 25.0%
! TTTACAAAAAGTTGCGATTA+TGG + chr5.3:5503693-5503712 None:intergenic 25.0%
!! ACGGTATGATTAAATTTTTG+AGG + chr5.3:5501903-5501922 None:intergenic 25.0%
!! GTTTCAAAATGTTGCAATTT+TGG + chr5.3:5503816-5503835 None:intergenic 25.0%
!! TGACATAGTTGATATATTTG+TGG - chr5.3:5502908-5502927 MS.gene025801:intron 25.0%
!!! ATTGCAACATTTTGAAACTT+AGG - chr5.3:5503818-5503837 MS.gene025801:intron 25.0%
!!! CGTAACATTTTAAAACTTAG+AGG + chr5.3:5503582-5503601 None:intergenic 25.0%
!!! CTATGATTTTTATTGGCTAT+TGG - chr5.3:5505122-5505141 MS.gene025801:CDS 25.0%
!!! GTATGATTAAATTTTTCAGC+TGG - chr5.3:5502181-5502200 MS.gene025801:intron 25.0%
!!! TATAATTTGTTTGGGAATTG+GGG + chr5.3:5503155-5503174 None:intergenic 25.0%
!!! TCTATTTTTTCGTAAGCATA+GGG - chr5.3:5502205-5502224 MS.gene025801:intron 25.0%
!!! TTCTATTTTTTCGTAAGCAT+AGG - chr5.3:5502204-5502223 MS.gene025801:intron 25.0%
!!! TTGCAACATTTTGAAACTTA+GGG - chr5.3:5503819-5503838 MS.gene025801:intron 25.0%
!!! TTTAGTAATTTTTTTGCGAC+TGG + chr5.3:5504706-5504725 None:intergenic 25.0%
!!! TTTTTAAGAGAATGTCCTAA+AGG - chr5.3:5504958-5504977 MS.gene025801:intron 25.0%
AAACAGTTTCTTAGACAAAG+CGG - chr5.3:5504393-5504412 MS.gene025801:CDS 30.0%
AAAGAAAAGAGAGGAGAAAA+TGG + chr5.3:5503129-5503148 None:intergenic 30.0%
AAAGTTTCTCTTCCAATGAA+TGG - chr5.3:5502695-5502714 MS.gene025801:intron 30.0%
AAATGACAACTGGGTTATTA+AGG - chr5.3:5503408-5503427 MS.gene025801:intron 30.0%
AATAAGGATGTTACCCATAT+GGG - chr5.3:5504507-5504526 MS.gene025801:intron 30.0%
ACATATTTCTCTAAACATGG+GGG - chr5.3:5503761-5503780 MS.gene025801:intron 30.0%
ACTCAAATTGTTCCATTCAT+TGG + chr5.3:5502710-5502729 None:intergenic 30.0%
AGAAACCAACTAATAATGTG+TGG - chr5.3:5503488-5503507 MS.gene025801:intron 30.0%
AGATGTGGAAGAAGTTAAAA+TGG - chr5.3:5504483-5504502 MS.gene025801:intron 30.0%
ATATACTGTATATGTCAAGG+AGG - chr5.3:5503220-5503239 MS.gene025801:intron 30.0%
CAAGTATGTGACCAAATTAA+CGG + chr5.3:5501326-5501345 None:intergenic 30.0%
CATATTTCCCTTATGTTAGA+GGG - chr5.3:5503730-5503749 MS.gene025801:intron 30.0%
CGATACGCAAAAAATACTAT+AGG + chr5.3:5503863-5503882 None:intergenic 30.0%
GAATGAAAACTATGAGTACA+GGG - chr5.3:5504980-5504999 MS.gene025801:CDS 30.0%
GAGATTATCTTACAATTGCT+TGG + chr5.3:5501674-5501693 None:intergenic 30.0%
GATATCTGTCAAACAAAGAA+TGG + chr5.3:5501626-5501645 None:intergenic 30.0%
GATATCTTGCAAATCTCAAA+AGG + chr5.3:5503904-5503923 None:intergenic 30.0%
GGAATATACTGTATATGTCA+AGG - chr5.3:5503217-5503236 MS.gene025801:intron 30.0%
GTATAGACAATCTTCTCTAA+TGG + chr5.3:5502879-5502898 None:intergenic 30.0%
GTATTTAGCACTTTACATCA+CGG - chr5.3:5502074-5502093 MS.gene025801:intron 30.0%
GTCAATCAATTATAATCGTC+AGG + chr5.3:5501838-5501857 None:intergenic 30.0%
TAATAAGGATGTTACCCATA+TGG - chr5.3:5504506-5504525 MS.gene025801:intron 30.0%
TATACTGTATATGTCAAGGA+GGG - chr5.3:5503221-5503240 MS.gene025801:intron 30.0%
TCTTCAAGGTAATAACAAAG+AGG + chr5.3:5504343-5504362 None:intergenic 30.0%
TTGAAAGGGTCAATAAACTT+CGG - chr5.3:5504115-5504134 MS.gene025801:CDS 30.0%
TTGTTCTTTCTACATCAAGT+GGG + chr5.3:5503353-5503372 None:intergenic 30.0%
TTTGTTCTTTCTACATCAAG+TGG + chr5.3:5503354-5503373 None:intergenic 30.0%
! ATGGATTGTCCAAAACATTA+TGG + chr5.3:5504539-5504558 None:intergenic 30.0%
! CAACTTTTTGTAAAGATGTG+AGG - chr5.3:5503699-5503718 MS.gene025801:intron 30.0%
! CATAAGGGAAATATGCTTTT+TGG + chr5.3:5503725-5503744 None:intergenic 30.0%
! CTCATAGTTTTCATTCCTTT+AGG + chr5.3:5504976-5504995 None:intergenic 30.0%
! TAATCATACCCTTCTTTTCT+TGG + chr5.3:5502170-5502189 None:intergenic 30.0%
! TGCCACAATTTTTCTTTGTT+GGG - chr5.3:5504896-5504915 MS.gene025801:intron 30.0%
! TTAGAGTCTTCTTTGCATTT+TGG + chr5.3:5502015-5502034 None:intergenic 30.0%
! TTTCTTGCTGATACTTTTCT+AGG - chr5.3:5501436-5501455 MS.gene025801:CDS 30.0%
!! ATTTTGACCCTCTAACATAA+GGG + chr5.3:5503740-5503759 None:intergenic 30.0%
!!! AGGTAATTTTGATTGATGAG+AGG + chr5.3:5504073-5504092 None:intergenic 30.0%
!!! TATTTTGACCCTCTAACATA+AGG + chr5.3:5503741-5503760 None:intergenic 30.0%
AAAAGAGAGGAGAAAATGGA+AGG + chr5.3:5503125-5503144 None:intergenic 35.0%
AAAGAGAGGAGAAAATGGAA+GGG + chr5.3:5503124-5503143 None:intergenic 35.0%
AACTTCTTCCACATCTGTTA+AGG + chr5.3:5504479-5504498 None:intergenic 35.0%
AATTTGGTCACATACTTGAC+CGG - chr5.3:5501328-5501347 MS.gene025801:CDS 35.0%
ATACAAGATAACCAAGGTAG+AGG - chr5.3:5502258-5502277 MS.gene025801:intron 35.0%
ATACTGTATATGTCAAGGAG+GGG - chr5.3:5503222-5503241 MS.gene025801:intron 35.0%
ATAGAGCAATGAAGAATCAG+AGG + chr5.3:5502442-5502461 None:intergenic 35.0%
ATATGCATATTGCTCCTCTT+TGG - chr5.3:5504294-5504313 MS.gene025801:CDS 35.0%
ATGGCCCACTATTAAATATG+TGG + chr5.3:5503387-5503406 None:intergenic 35.0%
ATTAACTCTCAGAAATCACG+AGG + chr5.3:5501586-5501605 None:intergenic 35.0%
ATTAGTAACAACATTGGCAG+AGG + chr5.3:5501377-5501396 None:intergenic 35.0%
ATTGCGGATAATCTTGATCA+AGG - chr5.3:5505093-5505112 MS.gene025801:CDS 35.0%
CAATCACAATCAAGGAGAAA+TGG - chr5.3:5504443-5504462 MS.gene025801:CDS 35.0%
CATATTAAGCAACACCAAAG+AGG + chr5.3:5504311-5504330 None:intergenic 35.0%
GACCCAACAAAGAAAAATTG+TGG + chr5.3:5504901-5504920 None:intergenic 35.0%
GATCATTTGCTCCTTAATCA+TGG - chr5.3:5503430-5503449 MS.gene025801:intron 35.0%
GCATATTTCCCTTATGTTAG+AGG - chr5.3:5503729-5503748 MS.gene025801:intron 35.0%
GGAATGAAAACTATGAGTAC+AGG - chr5.3:5504979-5504998 MS.gene025801:intron 35.0%
GTGTACATACAAGATAACCA+AGG - chr5.3:5502252-5502271 MS.gene025801:intron 35.0%
TAGAGCAATGAAGAATCAGA+GGG + chr5.3:5502441-5502460 None:intergenic 35.0%
TATCTCTACCTTAACAGATG+TGG - chr5.3:5504468-5504487 MS.gene025801:intron 35.0%
TCAATGACGGTCTTCTTAAT+CGG - chr5.3:5504637-5504656 MS.gene025801:intron 35.0%
TCCTTTATGCTCTGTCTATT+GGG - chr5.3:5501409-5501428 MS.gene025801:CDS 35.0%
TCTGATGACCAAGAAAAGAA+GGG - chr5.3:5502159-5502178 MS.gene025801:intron 35.0%
TGGTTTCCAATCATGAAGAT+CGG + chr5.3:5502859-5502878 None:intergenic 35.0%
TGTCCAAAACATTATGGTTG+TGG + chr5.3:5504533-5504552 None:intergenic 35.0%
TGTTCTTTCTACATCAAGTG+GGG + chr5.3:5503352-5503371 None:intergenic 35.0%
TTCTGATGACCAAGAAAAGA+AGG - chr5.3:5502158-5502177 MS.gene025801:intron 35.0%
TTCTTCATTGCTCTATGAAG+AGG - chr5.3:5502446-5502465 MS.gene025801:intron 35.0%
TTGCGGATAATCTTGATCAA+GGG - chr5.3:5505094-5505113 MS.gene025801:CDS 35.0%
TTGCTATGGTTATGTCTTGT+TGG - chr5.3:5502643-5502662 MS.gene025801:intron 35.0%
! AGAATGTTGTCATTTGAGCA+TGG + chr5.3:5504558-5504577 None:intergenic 35.0%
! ATAACCCAGTTGTCATTTCA+TGG + chr5.3:5503406-5503425 None:intergenic 35.0%
! CAATTTTTCTTTGTTGGGTC+TGG - chr5.3:5504901-5504920 MS.gene025801:intron 35.0%
! GGAGGCTCTATGATTTTTAT+TGG - chr5.3:5505115-5505134 MS.gene025801:CDS 35.0%
! GGTGCCACATATTTAATAGT+GGG - chr5.3:5503380-5503399 MS.gene025801:intron 35.0%
! GTCAAAAAAGAAGTATGCCT+TGG - chr5.3:5504046-5504065 MS.gene025801:CDS 35.0%
! GTGCCACAATTTTTCTTTGT+TGG - chr5.3:5504895-5504914 MS.gene025801:intron 35.0%
! TCCAAATAAACCATGGATTG+CGG - chr5.3:5505077-5505096 MS.gene025801:CDS 35.0%
!! GACACTATGTTAACTTGCTA+TGG - chr5.3:5502629-5502648 MS.gene025801:intron 35.0%
!! TATATTTGGCTTGTGCTAAG+TGG - chr5.3:5505172-5505191 MS.gene025801:CDS 35.0%
!! TTGCTGATACTTTTCTAGGA+AGG - chr5.3:5501440-5501459 MS.gene025801:CDS 35.0%
!!! GTATTTTTTGCGTATCGCTT+TGG - chr5.3:5503866-5503885 MS.gene025801:intron 35.0%
!!! TCAACAATTTTGGGACGAAA+GGG + chr5.3:5503642-5503661 None:intergenic 35.0%
!!! TGGTTTTGTAAACGATCCAA+CGG - chr5.3:5504843-5504862 MS.gene025801:intron 35.0%
AAGATAACCAAGGTAGAGGT+TGG - chr5.3:5502262-5502281 MS.gene025801:intron 40.0%
AAGGTAAGAGAAGGAAAAGG+TGG + chr5.3:5503096-5503115 None:intergenic 40.0%
AATGAAACTCCCATGCATCT+TGG + chr5.3:5503269-5503288 None:intergenic 40.0%
ACCAACCAAAACACACTCAA+TGG + chr5.3:5504877-5504896 None:intergenic 40.0%
ACCCAATAGACAGAGCATAA+AGG + chr5.3:5501413-5501432 None:intergenic 40.0%
ACTCTAGTGAACAATGTGAC+GGG - chr5.3:5505054-5505073 MS.gene025801:CDS 40.0%
AGATAACCAAGGTAGAGGTT+GGG - chr5.3:5502263-5502282 MS.gene025801:intron 40.0%
AGTATCACAAGCAACAACCA+TGG - chr5.3:5504579-5504598 MS.gene025801:intron 40.0%
ATTATGGTTGTGGCCCATAT+GGG + chr5.3:5504523-5504542 None:intergenic 40.0%
ATTGCCCAAATGCATAGTAC+CGG + chr5.3:5501350-5501369 None:intergenic 40.0%
CAATAGACAGAGCATAAAGG+AGG + chr5.3:5501410-5501429 None:intergenic 40.0%
CACTTCTCCTCCTAATATCA+TGG + chr5.3:5501275-5501294 None:intergenic 40.0%
CAGCACTCATAGAAATGAAG+CGG - chr5.3:5504800-5504819 MS.gene025801:intron 40.0%
CCAGATGCATCTGATTACAA+GGG - chr5.3:5501205-5501224 MS.gene025801:CDS 40.0%
CCTTGTAATCAGATGCATCT+GGG + chr5.3:5501207-5501226 None:intergenic 40.0%
CTCCTTTATGCTCTGTCTAT+TGG - chr5.3:5501408-5501427 MS.gene025801:CDS 40.0%
GACTCTAGTGAACAATGTGA+CGG - chr5.3:5505053-5505072 MS.gene025801:CDS 40.0%
GATATTAGGAGGAGAAGTGA+TGG - chr5.3:5501276-5501295 MS.gene025801:CDS 40.0%
GGAGAGGCCTTTATGTATAT+GGG - chr5.3:5504922-5504941 MS.gene025801:intron 40.0%
GGTTTCCAATCATGAAGATC+GGG + chr5.3:5502858-5502877 None:intergenic 40.0%
GTCAACACAAAGTGATAGAG+TGG - chr5.3:5503196-5503215 MS.gene025801:intron 40.0%
TACCAACAAGTTGCTTGATC+CGG + chr5.3:5502356-5502375 None:intergenic 40.0%
TAGTCCTTTGACTCAGATTG+CGG - chr5.3:5502374-5502393 MS.gene025801:intron 40.0%
TCAAGATTATCCGCAATCCA+TGG + chr5.3:5505090-5505109 None:intergenic 40.0%
TCAATCCCGATCTTCATGAT+TGG - chr5.3:5502850-5502869 MS.gene025801:intron 40.0%
TCCGCAATCCATGGTTTATT+TGG + chr5.3:5505081-5505100 None:intergenic 40.0%
TCGAAAGGAGATAGACTAGA+TGG + chr5.3:5503926-5503945 None:intergenic 40.0%
TCTTGAGCACACTCTCAATA+GGG - chr5.3:5505007-5505026 MS.gene025801:CDS 40.0%
TGCTAAGTGGTATGTGTACA+AGG - chr5.3:5505185-5505204 MS.gene025801:CDS 40.0%
TGGACTTGTCACCATGATTA+AGG + chr5.3:5503444-5503463 None:intergenic 40.0%
TGGAGAGGCCTTTATGTATA+TGG - chr5.3:5504921-5504940 MS.gene025801:intron 40.0%
TGTTCCAATGTGACAATCCA+TGG + chr5.3:5504599-5504618 None:intergenic 40.0%
TTAACTATTAAGCTCGTGCG+TGG + chr5.3:5503464-5503483 None:intergenic 40.0%
TTAGACAAAGCGGCAATCAA+AGG - chr5.3:5504403-5504422 MS.gene025801:CDS 40.0%
TTCACTCCTTTACAACGCAT+TGG - chr5.3:5504739-5504758 MS.gene025801:intron 40.0%
TTCTCCTCCTAATATCATGG+CGG + chr5.3:5501272-5501291 None:intergenic 40.0%
TTCTTGAGCACACTCTCAAT+AGG - chr5.3:5505006-5505025 MS.gene025801:CDS 40.0%
TTGAAATTCGCACGATCACA+TGG - chr5.3:5504823-5504842 MS.gene025801:intron 40.0%
TTGACCGGTACTATGCATTT+GGG - chr5.3:5501343-5501362 MS.gene025801:CDS 40.0%
TTGGGGAGTAAAGAAAAGAG+AGG + chr5.3:5503138-5503157 None:intergenic 40.0%
TTTATGCTCTGTCTATTGGG+TGG - chr5.3:5501412-5501431 MS.gene025801:CDS 40.0%
TTTCGTAAGCATAGGGTCTT+TGG - chr5.3:5502212-5502231 MS.gene025801:intron 40.0%
TTTGATTGATGAGAGGTCCA+AGG + chr5.3:5504066-5504085 None:intergenic 40.0%
! AAATCTAGTGTCTCTGGCTT+TGG - chr5.3:5502117-5502136 MS.gene025801:intron 40.0%
! ACAACCATGGATTGTCACAT+TGG - chr5.3:5504592-5504611 MS.gene025801:intron 40.0%
! ACAGTTTTCCCTTGTGTTGT+AGG + chr5.3:5501184-5501203 None:intergenic 40.0%
! AGATGCCATTGAGTGTGTTT+TGG - chr5.3:5504869-5504888 MS.gene025801:intron 40.0%
! ATCCTTTGCTTCTTGGTCTT+AGG + chr5.3:5502492-5502511 None:intergenic 40.0%
! CAGTTTTCCCTTGTGTTGTA+GGG + chr5.3:5501183-5501202 None:intergenic 40.0%
! GACACTAGATTTTAGACCAC+CGG + chr5.3:5502109-5502128 None:intergenic 40.0%
! GAGTCTTCTTTGCATTTTGG+TGG + chr5.3:5502012-5502031 None:intergenic 40.0%
! GCAATCAAAGGCATAGAAAG+TGG - chr5.3:5504415-5504434 MS.gene025801:CDS 40.0%
! GGCGTCTTCTCAACAATTTT+GGG + chr5.3:5503651-5503670 None:intergenic 40.0%
! GGGTGCCACATATTTAATAG+TGG - chr5.3:5503379-5503398 MS.gene025801:intron 40.0%
! GGTCTAAAATCTAGTGTCTC+TGG - chr5.3:5502111-5502130 MS.gene025801:intron 40.0%
! TGGCGTCTTCTCAACAATTT+TGG + chr5.3:5503652-5503671 None:intergenic 40.0%
! TGGTCTTAGGTGTTTCACAT+AGG + chr5.3:5502479-5502498 None:intergenic 40.0%
!! CTTTGCATTTTGGTGGATGT+AGG + chr5.3:5502005-5502024 None:intergenic 40.0%
!!! CAACAATTTTGGGACGAAAG+GGG + chr5.3:5503641-5503660 None:intergenic 40.0%
!!! CTCAACAATTTTGGGACGAA+AGG + chr5.3:5503643-5503662 None:intergenic 40.0%
!!! GCGATTATGGTCCCTTTTTT+GGG + chr5.3:5503680-5503699 None:intergenic 40.0%
!!! TGCGATTATGGTCCCTTTTT+TGG + chr5.3:5503681-5503700 None:intergenic 40.0%
AATCCCAGCAGCATCAATGA+CGG - chr5.3:5504624-5504643 MS.gene025801:intron 45.0%
AGAAAATGGAAGGGATGGGA+AGG + chr5.3:5503115-5503134 None:intergenic 45.0%
AGAGGAGAAAATGGAAGGGA+TGG + chr5.3:5503120-5503139 None:intergenic 45.0%
AGCAGACAGCAAGCAACTAT+TGG - chr5.3:5502047-5502066 MS.gene025801:intron 45.0%
AGTTGCATACGGCTCTCAAT+TGG + chr5.3:5503301-5503320 None:intergenic 45.0%
ATGCATCTGATTACAAGGGC+CGG - chr5.3:5501209-5501228 MS.gene025801:CDS 45.0%
ATGGAGAGGTTGACAACACT+CGG - chr5.3:5501295-5501314 MS.gene025801:CDS 45.0%
ATGTGGCATCCTTTGCTTCT+TGG + chr5.3:5502499-5502518 None:intergenic 45.0%
CACCTAAGACCAAGAAGCAA+AGG - chr5.3:5502487-5502506 MS.gene025801:intron 45.0%
CATTATGGTTGTGGCCCATA+TGG + chr5.3:5504524-5504543 None:intergenic 45.0%
CCAACACCAATGCGTTGTAA+AGG + chr5.3:5504748-5504767 None:intergenic 45.0%
CCCAGATGCATCTGATTACA+AGG - chr5.3:5501204-5501223 MS.gene025801:CDS 45.0%
CCCTTGTAATCAGATGCATC+TGG + chr5.3:5501208-5501227 None:intergenic 45.0%
CGGATAATCTTGATCAAGGG+AGG - chr5.3:5505097-5505116 MS.gene025801:CDS 45.0%
CTTGACCGGTACTATGCATT+TGG - chr5.3:5501342-5501361 MS.gene025801:CDS 45.0%
GAGGAGAAAATGGAAGGGAT+GGG + chr5.3:5503119-5503138 None:intergenic 45.0%
GATAACCAAGGTAGAGGTTG+GGG - chr5.3:5502264-5502283 MS.gene025801:intron 45.0%
GGCAGGATCAACATCGAATA+GGG + chr5.3:5503248-5503267 None:intergenic 45.0%
GGGAAGGTAAGAGAAGGAAA+AGG + chr5.3:5503099-5503118 None:intergenic 45.0%
GGTCGTAGAAAGGAACAGTT+AGG + chr5.3:5504672-5504691 None:intergenic 45.0%
GTTGCTTGATCCGGTATTTG+CGG + chr5.3:5502347-5502366 None:intergenic 45.0%
TACCGGATCAAGCAACTTGT+TGG - chr5.3:5502351-5502370 MS.gene025801:intron 45.0%
TATTTGTGCGGTCGCAATTG+TGG - chr5.3:5502293-5502312 MS.gene025801:intron 45.0%
TCAGATTGCGGTCGTGTTTA+TGG - chr5.3:5502386-5502405 MS.gene025801:intron 45.0%
TGCCACATAGCAAACAGTTC+CGG - chr5.3:5502511-5502530 MS.gene025801:intron 45.0%
TGGCAGGATCAACATCGAAT+AGG + chr5.3:5503249-5503268 None:intergenic 45.0%
TGGCAGTGCAATCACAATCA+AGG - chr5.3:5504435-5504454 MS.gene025801:CDS 45.0%
TGGGCCATGAAATGACAACT+GGG - chr5.3:5503399-5503418 MS.gene025801:intron 45.0%
TTGATCCTGCCAAGATGCAT+GGG - chr5.3:5503257-5503276 MS.gene025801:intron 45.0%
TTGCTTGATCCGGTATTTGC+GGG + chr5.3:5502346-5502365 None:intergenic 45.0%
TTGGGGTTACGGTATTTGTG+CGG - chr5.3:5502281-5502300 MS.gene025801:intron 45.0%
TTTCCCTTGTGTTGTAGGGA+GGG + chr5.3:5501179-5501198 None:intergenic 45.0%
TTTCTTTGTTGGGTCTGGAG+AGG - chr5.3:5504906-5504925 MS.gene025801:intron 45.0%
! CCTTTACAACGCATTGGTGT+TGG - chr5.3:5504745-5504764 MS.gene025801:intron 45.0%
! GGGCCACAACCATAATGTTT+TGG - chr5.3:5504527-5504546 MS.gene025801:intron 45.0%
! TGACGGGTCCAAATAAACCA+TGG - chr5.3:5505070-5505089 MS.gene025801:CDS 45.0%
! TTTTCCCTTGTGTTGTAGGG+AGG + chr5.3:5501180-5501199 None:intergenic 45.0%
!! CATTTTGGTGGATGTAGGCT+TGG + chr5.3:5502000-5502019 None:intergenic 45.0%
!! TACCGGAACTGTTTGCTATG+TGG + chr5.3:5502516-5502535 None:intergenic 45.0%
!!! GCCATTGAGTGTGTTTTGGT+TGG - chr5.3:5504873-5504892 MS.gene025801:intron 45.0%
!!! TTTTTAACATAATATAATTT+CGG - chr5.3:5503059-5503078 MS.gene025801:intron 5.0%
AAACTCCCATGCATCTTGGC+AGG + chr5.3:5503265-5503284 None:intergenic 50.0%
AAGACCGTCATTGATGCTGC+TGG + chr5.3:5504631-5504650 None:intergenic 50.0%
AAGCATAGGGTCTTTGGCAG+CGG - chr5.3:5502218-5502237 MS.gene025801:intron 50.0%
ACGACCGCAATCTGAGTCAA+AGG + chr5.3:5502381-5502400 None:intergenic 50.0%
ACGCCACGTGTCCCAAAAAA+GGG - chr5.3:5503666-5503685 MS.gene025801:intron 50.0%
ACTCGGCATCGCCGTTAATT+TGG - chr5.3:5501312-5501331 MS.gene025801:CDS 50.0%
AGACCGTCATTGATGCTGCT+GGG + chr5.3:5504630-5504649 None:intergenic 50.0%
AGGGATGGGAAGGTAAGAGA+AGG + chr5.3:5503105-5503124 None:intergenic 50.0%
AGTCCTCTCAGTAGTGTCCA+TGG - chr5.3:5504771-5504790 MS.gene025801:CDS 50.0%
CAACCATGGACACTACTGAG+AGG + chr5.3:5504777-5504796 None:intergenic 50.0%
CAAGGTAGAGGTTGGGGTTA+CGG - chr5.3:5502270-5502289 MS.gene025801:intron 50.0%
CGAATGAAGCGGTCGTAGAA+AGG + chr5.3:5504682-5504701 None:intergenic 50.0%
CTCAATGGCATCTTTGCCGT+TGG + chr5.3:5504862-5504881 None:intergenic 50.0%
CTCAGTAGTGTCCATGGTTG+CGG - chr5.3:5504777-5504796 MS.gene025801:CDS 50.0%
GACAGCTGCAAAGATGGCAA+TGG + chr5.3:5501652-5501671 None:intergenic 50.0%
GTGGGCCATGAAATGACAAC+TGG - chr5.3:5503398-5503417 MS.gene025801:intron 50.0%
GTTGATCCTGCCAAGATGCA+TGG - chr5.3:5503256-5503275 MS.gene025801:intron 50.0%
TCGTGTTTATGGCTGCTTGG+AGG - chr5.3:5502397-5502416 MS.gene025801:intron 50.0%
TGCTTGGACAGCTGCAAAGA+TGG + chr5.3:5501658-5501677 None:intergenic 50.0%
! TAGGAGGAGAAGTGATGGAG+AGG - chr5.3:5501281-5501300 MS.gene025801:CDS 50.0%
! TTGCGACTGGTCGAATGAAG+CGG + chr5.3:5504693-5504712 None:intergenic 50.0%
!! CAAGGACAAGAGACTTGCTG+AGG - chr5.3:5505203-5505222 MS.gene025801:CDS 50.0%
!! GGGTACCGGACAAGAAAACA+AGG + chr5.3:5502326-5502345 None:intergenic 50.0%
!!! GCGCTCCTTGTTTTCTTGTC+CGG - chr5.3:5502318-5502337 MS.gene025801:intron 50.0%
AGCACCCTCCCTACAACACA+AGG - chr5.3:5501172-5501191 MS.gene025801:CDS 55.0%
ATCTGATTACAAGGGCCGGC+TGG - chr5.3:5501213-5501232 MS.gene025801:CDS 55.0%
CGGTCGTGTTTATGGCTGCT+TGG - chr5.3:5502394-5502413 MS.gene025801:intron 55.0%
CGTAACCCCAACCTCTACCT+TGG + chr5.3:5502272-5502291 None:intergenic 55.0%
GACGCCACGTGTCCCAAAAA+AGG - chr5.3:5503665-5503684 MS.gene025801:intron 55.0%
GATCCGGTATTTGCGGGTAC+CGG + chr5.3:5502340-5502359 None:intergenic 55.0%
GCACCCTCCCTACAACACAA+GGG - chr5.3:5501173-5501192 MS.gene025801:CDS 55.0%
GCACTTTACATCACGGCCCT+CGG - chr5.3:5502081-5502100 MS.gene025801:intron 55.0%
TCCTAATATCATGGCGGCCG+CGG + chr5.3:5501266-5501285 None:intergenic 55.0%
TGCTGAGGCGGGCATAGAAT+TGG - chr5.3:5505218-5505237 MS.gene025801:CDS 55.0%
TGTCCGGTACCCGCAAATAC+CGG - chr5.3:5502334-5502353 MS.gene025801:intron 55.0%
! TATGAGTGCTGCCGCAACCA+TGG + chr5.3:5504791-5504810 None:intergenic 55.0%
!! ATTTTAGACCACCGGTGCCG+AGG + chr5.3:5502101-5502120 None:intergenic 55.0%
!! GACAAGAGACTTGCTGAGGC+GGG - chr5.3:5505207-5505226 MS.gene025801:CDS 55.0%
!! GGACAAGAGACTTGCTGAGG+CGG - chr5.3:5505206-5505225 MS.gene025801:CDS 55.0%
!! TTTTAGACCACCGGTGCCGA+GGG + chr5.3:5502100-5502119 None:intergenic 55.0%
!!! GGTCCCTTTTTTGGGACACG+TGG + chr5.3:5503672-5503691 None:intergenic 55.0%
ACAGGTCCACAACCGGTGGT+TGG - chr5.3:5501239-5501258 MS.gene025801:CDS 60.0%
GCGGCCGCCATGATATTAGG+AGG - chr5.3:5501265-5501284 MS.gene025801:CDS 60.0%
TCCGCGGCCGCCATGATATT+AGG - chr5.3:5501262-5501281 MS.gene025801:CDS 60.0%
! ACCACCGGTTGTGGACCTGT+CGG + chr5.3:5501239-5501258 None:intergenic 60.0%
CTGGCCGACAGGTCCACAAC+CGG - chr5.3:5501232-5501251 MS.gene025801:CDS 65.0%
TACATCACGGCCCTCGGCAC+CGG - chr5.3:5502087-5502106 MS.gene025801:intron 65.0%
TTGTGGACCTGTCGGCCAGC+CGG + chr5.3:5501231-5501250 None:intergenic 65.0%
! CACAACCGGTGGTTGGTCCG+CGG - chr5.3:5501246-5501265 MS.gene025801:CDS 65.0%
GCCGACAGGTCCACAACCGG+TGG - chr5.3:5501235-5501254 MS.gene025801:CDS 70.0%
! CGCGGACCAACCACCGGTTG+TGG + chr5.3:5501248-5501267 None:intergenic 70.0%
! ACAAGGGCCGGCTGGCCGAC+AGG - chr5.3:5501221-5501240 MS.gene025801:CDS 75.0%
! ATCACGGCCCTCGGCACCGG+TGG - chr5.3:5502090-5502109 MS.gene025801:intron 75.0%
! GGCGGCCGCGGACCAACCAC+CGG + chr5.3:5501254-5501273 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 5501169 5505272 5501169 ID=MS.gene025801
chr5.3 mRNA 5501169 5505272 5501169 ID=MS.gene025801.t1;Parent=MS.gene025801
chr5.3 exon 5504980 5505272 5504980 ID=MS.gene025801.t1.exon1;Parent=MS.gene025801.t1
chr5.3 CDS 5504980 5505272 5504980 ID=cds.MS.gene025801.t1;Parent=MS.gene025801.t1
chr5.3 exon 5504761 5504800 5504761 ID=MS.gene025801.t1.exon2;Parent=MS.gene025801.t1
chr5.3 CDS 5504761 5504800 5504761 ID=cds.MS.gene025801.t1;Parent=MS.gene025801.t1
chr5.3 exon 5503909 5504477 5503909 ID=MS.gene025801.t1.exon3;Parent=MS.gene025801.t1
chr5.3 CDS 5503909 5504477 5503909 ID=cds.MS.gene025801.t1;Parent=MS.gene025801.t1
chr5.3 exon 5501169 5502042 5501169 ID=MS.gene025801.t1.exon4;Parent=MS.gene025801.t1
chr5.3 CDS 5501169 5502042 5501169 ID=cds.MS.gene025801.t1;Parent=MS.gene025801.t1
Gene Sequence

>MS.gene025801

ATGAGCACCCTCCCTACAACACAAGGGAAAACTGTCCCAGATGCATCTGATTACAAGGGCCGGCTGGCCGACAGGTCCACAACCGGTGGTTGGTCCGCGGCCGCCATGATATTAGGAGGAGAAGTGATGGAGAGGTTGACAACACTCGGCATCGCCGTTAATTTGGTCACATACTTGACCGGTACTATGCATTTGGGCAATGCTGCCTCTGCCAATGTTGTTACTAATTTCTTAGGAACCTCCTTTATGCTCTGTCTATTGGGTGGATTTCTTGCTGATACTTTTCTAGGAAGGTTCGAAATTTAATATATCTATAAAAAAAATTCCTTTCTTATTATGGAAAACTAAGACAAGACTTAGTTATTTTATTTTTGTTATTCAAATGATCCACATTAATTATGATTGGTTTTAATGCCTCGTGATTTCTGAGAGTTAATTTAATATTTTTTGCTTCCCATTCTTTGTTTGACAGATATCTCACCATTGCCATCTTTGCAGCTGTCCAAGCAATTGTAAGATAATCTCAACTATTCATTTTGTTGTTTCCATTGTTTTCTAGTACTATTTTACATTCAAATCAAGATTTTAATATTAGTATACATGTAAAAAAGTTTGCAACAATTCAAATAAATATTCTAATCAAAGTAACTCATTAATTTTTAATGACCTGACGATTATAATTGATTGACAATGTAAATTTTTCTTACGCTAACAATGCCTTTGAATTAAATCCTCAAAAATTTAATCATACCGTTGTTTAGTTCTTTGATATTGACGAATGTATGTTTATATTAGGGTGTAACAATATTGACGATATCAACTATAATTCCAAGCCTACATCCACCAAAATGCAAAGAAGACTCTAAATCTTGCATACAAGCAGACAGCAAGCAACTATTGGTGATGTATTTAGCACTTTACATCACGGCCCTCGGCACCGGTGGTCTAAAATCTAGTGTCTCTGGCTTTGGTTCTGATCAATTTGATGATTCTGATGACCAAGAAAAGAAGGGTATGATTAAATTTTTCAGCTGGTTCTATTTTTTCGTAAGCATAGGGTCTTTGGCAGCGGTGACTGTTCTTGTGTACATACAAGATAACCAAGGTAGAGGTTGGGGTTACGGTATTTGTGCGGTCGCAATTGTGGTTGCGCTCCTTGTTTTCTTGTCCGGTACCCGCAAATACCGGATCAAGCAACTTGTTGGTAGTCCTTTGACTCAGATTGCGGTCGTGTTTATGGCTGCTTGGAGGAAGAGACACATGCAATTGCCCTCTGATTCTTCATTGCTCTATGAAGAGGATGATATCCTATGTGAAACACCTAAGACCAAGAAGCAAAGGATGCCACATAGCAAACAGTTCCGGTAAATTTTCTATTCATTCTTCTTAGTATTATAGTATAATAATTATTATTATACATAACTTTATTCTTTTTTAACTTAATAAGTTCTTTTTTTTTTGACACTATGTTAACTTGCTATGGTTATGTCTTGTTGGTGTTCCTCTTAGTTTAAGTAGCTTAATCTAAAGTTTCTCTTCCAATGAATGGAACAATTTGAGTAATAATTTATATAAAAAAATTCAATTATAGTTTCTTGTTGACTAGACTACAATAATGTTTGCTAAACTAGTATTCATTCATTTATTTATTTATTGGATTGTAGAACAAGCAAAACTTTTTTCAATCCCGATCTTCATGATTGGAAACCATTAGAGAAGATTGTCTATACTAAAAACATTGACATAGTTGATATATTTGTGGTTGTTGACTCAAAATTGAATAGTTTGGATTTCAAATTCGTATATTTTTATTTTATTTGAAAACAAAAGTTGGATTATTTAATCTCAAATCTTACTATCACATATATTCTGAAAGTGTAATGCATCAATTTTTTAACATAATATAATTTCGGAGACAATATATCCACCTTTTCCTTCTCTTACCTTCCCATCCCTTCCATTTTCTCCTCTCTTTTCTTTACTCCCCAATTCCCAAACAAATTATAAAGGTTTAGATTCAAAGTTGAGTCAACACAAAGTGATAGAGTGGAATATACTGTATATGTCAAGGAGGGGCCCTATTCGATGTTGATCCTGCCAAGATGCATGGGAGTTTCATTTTCAATTTACCAATTGAGAGCCGTATGCAACTAACAATAAAGACATTTATCATTATTGGGCCCCACTTGATGTAGAAAGAACAAATTATTGGGTGCCACATATTTAATAGTGGGCCATGAAATGACAACTGGGTTATTAAGGATCATTTGCTCCTTAATCATGGTGACAAGTCCACGCACGAGCTTAATAGTTAAGAGTAGAAACCAACTAATAATGTGTGGTTTATTCTCTCAAAAAATAATGTGTGGTTTATATAATAGTATAGTATTGGCTAAACTGCACTTTTCGCCCTCTAAGTTTTAAAATGTTACGATTTTGGTTCCTTATTAAAAAAATTTGCAATTTTGGCCCCTTTCGTCCCAAAATTGTTGAGAAGACGCCACGTGTCCCAAAAAAGGGACCATAATCGCAACTTTTTGTAAAGATGTGAGGCCAAAAAGCATATTTCCCTTATGTTAGAGGGTCAAAATAACATATTTCTCTAAACATGGGGGTTACTTTTGCAATTTTTTTTAATAGGGGGCCAAAATTGCAACATTTTGAAACTTAGGGACAAAAAGTGCAGTTTAGCCTATAGTATTTTTTGCGTATCGCTTTGGATATTTTCTCTGCCTTTTGAGATTTGCAAGATATCCATCTAGTCTATCTCCTTTCGAAATTATTGCTTTTACATATTCACAAGCTTGTCAACGTCTAAAGTTTCAAAAATCTAACTAAGGATGAGAAAATTAACACCTTTCTTTGTTTTTAGTTAATGTCAAAAAAGAAGTATGCCTTGGACCTCTCATCAATCAAAATTACCTTAAAGTATATTAAGTAGATTGATTGAAAGGGTCAATAAACTTCGGTTACAGTTGAAATTAATTCGAAGCACTTAAGTTCATGTCTAATTGAAATAATTTTTAATTAGACTTTACTTATTTTACCACTGAATTACAAATTAATAAAGCTCATAGTCTATTTTTTAAAAAACACGAGACTTGAGACAAAAAAAAACATAATTAATATGCATATTGCTCCTCTTTGGTGTTGCTTAATATGTATATTTCTCCTCTTTGTTATTACCTTGAAGATTAATGAATTAATTGATTTACATTTTGATCAAACAGTTTCTTAGACAAAGCGGCAATCAAAGGCATAGAAAGTGGCAGTGCAATCACAATCAAGGAGAAATGGTATATCTCTACCTTAACAGATGTGGAAGAAGTTAAAATGGTAATAAGGATGTTACCCATATGGGCCACAACCATAATGTTTTGGACAATCCATGCTCAAATGACAACATTCTCAGTATCACAAGCAACAACCATGGATTGTCACATTGGAACATTTCAAATCCCAGCAGCATCAATGACGGTCTTCTTAATCGGAACTATTCTCCTAACTGTTCCTTTCTACGACCGCTTCATTCGACCAGTCGCAAAAAAATTACTAAACAACTCACACGGATTCACTCCTTTACAACGCATTGGTGTTGGTTTAGTCCTCTCAGTAGTGTCCATGGTTGCGGCAGCACTCATAGAAATGAAGCGGTTGAAATTCGCACGATCACATGGTTTTGTAAACGATCCAACGGCAAAGATGCCATTGAGTGTGTTTTGGTTGGTGCCACAATTTTTCTTTGTTGGGTCTGGAGAGGCCTTTATGTATATGGGACAATTAGACTTTTTTTTAAGAGAATGTCCTAAAGGAATGAAAACTATGAGTACAGGGTTGTTCTTGAGCACACTCTCAATAGGGTTTTTCTTTAGCTCATTATTAGTGACTCTAGTGAACAATGTGACGGGTCCAAATAAACCATGGATTGCGGATAATCTTGATCAAGGGAGGCTCTATGATTTTTATTGGCTATTGGCTATGCTAAGTGCTATAAATGTGGTGATATATTTGGCTTGTGCTAAGTGGTATGTGTACAAGGACAAGAGACTTGCTGAGGCGGGCATAGAATTGGAAGAAATAGATGCCTCTACATTCCATGCATAG
Protein sequence

>MS.gene025801.t1

MSTLPTTQGKTVPDASDYKGRLADRSTTGGWSAAAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYLTIAIFAAVQAIGVTILTISTIIPSLHPPKCKEDSKSCIQADSKQLLVMYLALYITALGTGGLKSSVSGFGSDQFDDSDDQEKKGMIKFFSWFYFFVSIGSLAAVTVLVYIQDNQGRGWGYGICAVAIVVALLVFLSGTRKYRIKQLVGSPLTQIAVVFMAAWRKRHMQLPSDSSLLYEEDDILCETPKTKKQRMPHSKQFRFLDKAAIKGIESGSAITIKEKWYISTLTDVEEVKMVIRMLPIWATTIMFWTIHAQMTTFSVSQATTMDCHIGTFQIPAASMTVFLIGTILLTVPFYDRFIRPVAKKLLNNSHGFTPLQRIGVGLVLSVVSMVAAALIEMKRLKFARSHGFVNDPTAKMPLSVFWLVPQFFFVGSGEAFMYMGQLDFFLRECPKGMKTMSTGLFLSTLSIGFFFSSLLVTLVNNVTGPNKPWIADNLDQGRLYDFYWLLAMLSAINVVIYLACAKWYVYKDKRLAEAGIELEEIDASTFHA