Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45440.t1 | RHN79461.1 | 93.4 | 572 | 34 | 2 | 1 | 568 | 1 | 572 | 1.70E-302 | 1048.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45440.t1 | Q9M817 | 49.8 | 578 | 259 | 8 | 15 | 567 | 2 | 573 | 4.2e-161 | 569.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45440.t1 | A0A396JRR6 | 93.4 | 572 | 34 | 2 | 1 | 568 | 1 | 572 | 1.2e-302 | 1048.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049369 | MS.gene45440 | 0.813273 | 2.78E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene45440 | 0.806725 | 7.16E-50 | -1.69E-46 |
| MS.gene051255 | MS.gene45440 | 0.834529 | 2.84E-56 | -1.69E-46 |
| MS.gene051360 | MS.gene45440 | 0.879467 | 1.22E-69 | -1.69E-46 |
| MS.gene053169 | MS.gene45440 | 0.802519 | 5.40E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene45440 | 0.802668 | 5.03E-49 | -1.69E-46 |
| MS.gene05492 | MS.gene45440 | 0.827494 | 1.52E-54 | -1.69E-46 |
| MS.gene055666 | MS.gene45440 | 0.87963 | 1.06E-69 | -1.69E-46 |
| MS.gene056422 | MS.gene45440 | 0.814144 | 1.79E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene45440 | 0.800159 | 1.64E-48 | -1.69E-46 |
| MS.gene059674 | MS.gene45440 | 0.802665 | 5.04E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene45440 | 0.831898 | 1.29E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene45440 | 0.865945 | 4.09E-65 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45440.t1 | MTR_1g057460 | 93.357 | 572 | 34 | 2 | 1 | 568 | 1 | 572 | 0.0 | 1091 |
| MS.gene45440.t1 | MTR_1g057460 | 94.611 | 501 | 27 | 0 | 68 | 568 | 1 | 501 | 0.0 | 976 |
| MS.gene45440.t1 | MTR_0236s0050 | 93.613 | 501 | 32 | 0 | 68 | 568 | 1 | 501 | 0.0 | 938 |
| MS.gene45440.t1 | MTR_2g101640 | 71.550 | 587 | 143 | 7 | 22 | 585 | 1 | 586 | 0.0 | 849 |
| MS.gene45440.t1 | MTR_2g101590 | 69.686 | 574 | 153 | 6 | 32 | 585 | 17 | 589 | 0.0 | 806 |
| MS.gene45440.t1 | MTR_2g101610 | 69.043 | 575 | 156 | 6 | 32 | 585 | 17 | 590 | 0.0 | 802 |
| MS.gene45440.t1 | MTR_4g011280 | 67.877 | 551 | 159 | 5 | 33 | 565 | 24 | 574 | 0.0 | 750 |
| MS.gene45440.t1 | MTR_2g101560 | 65.739 | 575 | 176 | 4 | 32 | 585 | 17 | 591 | 0.0 | 749 |
| MS.gene45440.t1 | MTR_2g101650 | 58.212 | 548 | 210 | 4 | 38 | 566 | 22 | 569 | 0.0 | 642 |
| MS.gene45440.t1 | MTR_1g009200 | 47.878 | 589 | 281 | 8 | 9 | 578 | 1 | 582 | 4.06e-171 | 501 |
| MS.gene45440.t1 | MTR_8g103233 | 46.277 | 564 | 281 | 10 | 38 | 583 | 15 | 574 | 5.66e-171 | 500 |
| MS.gene45440.t1 | MTR_1g026740 | 45.018 | 542 | 276 | 6 | 41 | 563 | 18 | 556 | 2.02e-167 | 491 |
| MS.gene45440.t1 | MTR_1g026750 | 46.984 | 547 | 268 | 7 | 41 | 568 | 19 | 562 | 1.17e-162 | 478 |
| MS.gene45440.t1 | MTR_1g026770 | 44.973 | 547 | 278 | 7 | 41 | 568 | 16 | 558 | 1.74e-156 | 462 |
| MS.gene45440.t1 | MTR_5g038060 | 34.542 | 579 | 339 | 11 | 14 | 560 | 4 | 574 | 2.57e-114 | 355 |
| MS.gene45440.t1 | MTR_4g107510 | 35.875 | 577 | 341 | 10 | 11 | 560 | 7 | 581 | 1.74e-113 | 353 |
| MS.gene45440.t1 | MTR_5g055000 | 35.149 | 569 | 334 | 12 | 38 | 581 | 16 | 574 | 2.73e-111 | 347 |
| MS.gene45440.t1 | MTR_4g107580 | 34.722 | 576 | 332 | 13 | 21 | 560 | 3 | 570 | 2.91e-111 | 347 |
| MS.gene45440.t1 | MTR_4g107530 | 35.253 | 573 | 339 | 11 | 37 | 579 | 30 | 600 | 7.88e-109 | 341 |
| MS.gene45440.t1 | MTR_7g088790 | 31.341 | 619 | 375 | 15 | 9 | 596 | 1 | 600 | 1.03e-104 | 330 |
| MS.gene45440.t1 | MTR_8g469480 | 34.191 | 544 | 329 | 9 | 43 | 560 | 41 | 581 | 1.16e-104 | 330 |
| MS.gene45440.t1 | MTR_7g088825 | 31.826 | 597 | 366 | 16 | 31 | 596 | 11 | 597 | 2.14e-103 | 327 |
| MS.gene45440.t1 | MTR_3g462710 | 35.326 | 552 | 329 | 11 | 32 | 560 | 14 | 560 | 1.02e-100 | 319 |
| MS.gene45440.t1 | MTR_7g088820 | 30.860 | 593 | 364 | 14 | 23 | 583 | 5 | 583 | 6.85e-97 | 310 |
| MS.gene45440.t1 | MTR_5g038190 | 30.797 | 552 | 353 | 9 | 35 | 560 | 17 | 565 | 1.21e-96 | 308 |
| MS.gene45440.t1 | MTR_4g015080 | 35.359 | 543 | 325 | 11 | 38 | 560 | 32 | 568 | 7.34e-96 | 306 |
| MS.gene45440.t1 | MTR_8g469470 | 32.668 | 551 | 341 | 11 | 38 | 560 | 30 | 578 | 6.43e-95 | 304 |
| MS.gene45440.t1 | MTR_7g067010 | 35.130 | 538 | 321 | 11 | 38 | 554 | 22 | 552 | 2.29e-93 | 300 |
| MS.gene45440.t1 | MTR_4g107610 | 30.716 | 573 | 364 | 14 | 39 | 583 | 30 | 597 | 9.60e-88 | 286 |
| MS.gene45440.t1 | MTR_3g112460 | 32.653 | 539 | 331 | 13 | 38 | 557 | 21 | 546 | 1.60e-87 | 284 |
| MS.gene45440.t1 | MTR_1g009170 | 37.923 | 443 | 199 | 11 | 154 | 585 | 5 | 382 | 4.71e-85 | 272 |
| MS.gene45440.t1 | MTR_3g112470 | 33.024 | 539 | 329 | 14 | 38 | 557 | 21 | 546 | 1.53e-84 | 276 |
| MS.gene45440.t1 | MTR_3g462710 | 35.965 | 456 | 266 | 10 | 126 | 560 | 1 | 451 | 1.94e-83 | 270 |
| MS.gene45440.t1 | MTR_7g088820 | 30.377 | 530 | 325 | 14 | 83 | 583 | 7 | 521 | 2.19e-83 | 272 |
| MS.gene45440.t1 | MTR_4g019580 | 31.185 | 574 | 356 | 15 | 10 | 560 | 9 | 566 | 4.15e-80 | 265 |
| MS.gene45440.t1 | MTR_5g012270 | 31.071 | 560 | 332 | 15 | 38 | 560 | 27 | 569 | 5.03e-80 | 265 |
| MS.gene45440.t1 | MTR_7g064800 | 29.725 | 545 | 356 | 11 | 35 | 554 | 21 | 563 | 6.03e-79 | 262 |
| MS.gene45440.t1 | MTR_3g005010 | 29.964 | 554 | 349 | 11 | 20 | 560 | 13 | 540 | 7.04e-79 | 261 |
| MS.gene45440.t1 | MTR_3g112450 | 32.044 | 543 | 337 | 13 | 38 | 560 | 21 | 551 | 9.76e-79 | 261 |
| MS.gene45440.t1 | MTR_4g033315 | 32.008 | 528 | 326 | 13 | 49 | 560 | 40 | 550 | 2.01e-78 | 260 |
| MS.gene45440.t1 | MTR_4g033310 | 32.008 | 528 | 326 | 13 | 49 | 560 | 40 | 550 | 2.01e-78 | 260 |
| MS.gene45440.t1 | MTR_7g064780 | 28.877 | 561 | 374 | 11 | 17 | 554 | 3 | 561 | 2.54e-78 | 260 |
| MS.gene45440.t1 | MTR_7g065080 | 30.319 | 564 | 360 | 13 | 14 | 560 | 8 | 555 | 1.04e-77 | 259 |
| MS.gene45440.t1 | MTR_3g069500 | 29.381 | 565 | 375 | 9 | 11 | 560 | 2 | 557 | 1.21e-77 | 258 |
| MS.gene45440.t1 | MTR_4g033325 | 31.499 | 527 | 328 | 9 | 49 | 560 | 40 | 548 | 1.75e-77 | 257 |
| MS.gene45440.t1 | MTR_2g093160 | 32.657 | 542 | 326 | 13 | 40 | 560 | 21 | 544 | 2.48e-77 | 256 |
| MS.gene45440.t1 | MTR_3g014790 | 32.857 | 560 | 315 | 16 | 32 | 557 | 9 | 541 | 4.79e-77 | 256 |
| MS.gene45440.t1 | MTR_7g006540 | 31.664 | 559 | 332 | 15 | 40 | 560 | 63 | 609 | 9.75e-76 | 255 |
| MS.gene45440.t1 | MTR_7g088820 | 30.917 | 469 | 288 | 12 | 137 | 583 | 19 | 473 | 1.24e-75 | 250 |
| MS.gene45440.t1 | MTR_0294s0020 | 30.127 | 551 | 353 | 9 | 22 | 560 | 16 | 546 | 2.02e-75 | 252 |
| MS.gene45440.t1 | MTR_7g065080 | 31.458 | 480 | 301 | 11 | 97 | 560 | 1 | 468 | 1.32e-74 | 248 |
| MS.gene45440.t1 | MTR_4g033330 | 31.238 | 541 | 332 | 14 | 22 | 545 | 16 | 533 | 1.46e-74 | 249 |
| MS.gene45440.t1 | MTR_3g069440 | 31.150 | 565 | 358 | 12 | 37 | 579 | 29 | 584 | 2.34e-74 | 250 |
| MS.gene45440.t1 | MTR_2g017750 | 28.498 | 586 | 379 | 12 | 13 | 560 | 2 | 585 | 4.00e-74 | 249 |
| MS.gene45440.t1 | MTR_7g005930 | 30.571 | 543 | 346 | 12 | 39 | 560 | 34 | 566 | 2.85e-73 | 247 |
| MS.gene45440.t1 | MTR_2g093180 | 33.395 | 542 | 323 | 12 | 40 | 560 | 21 | 545 | 2.90e-73 | 246 |
| MS.gene45440.t1 | MTR_3g069420 | 31.157 | 536 | 333 | 11 | 49 | 560 | 43 | 566 | 2.80e-72 | 244 |
| MS.gene45440.t1 | MTR_2g093640 | 32.965 | 543 | 323 | 14 | 40 | 560 | 21 | 544 | 3.81e-72 | 243 |
| MS.gene45440.t1 | MTR_4g114340 | 31.423 | 541 | 351 | 9 | 38 | 562 | 22 | 558 | 4.35e-72 | 243 |
| MS.gene45440.t1 | MTR_1g116930 | 29.772 | 571 | 365 | 13 | 38 | 580 | 21 | 583 | 6.49e-72 | 243 |
| MS.gene45440.t1 | MTR_7g098200 | 30.237 | 549 | 338 | 14 | 49 | 571 | 38 | 567 | 1.82e-71 | 242 |
| MS.gene45440.t1 | MTR_7g098200 | 30.090 | 555 | 341 | 14 | 49 | 571 | 38 | 577 | 2.61e-71 | 242 |
| MS.gene45440.t1 | MTR_5g014150 | 28.972 | 535 | 353 | 11 | 50 | 560 | 54 | 585 | 3.87e-71 | 241 |
| MS.gene45440.t1 | MTR_3g100980 | 31.379 | 580 | 345 | 15 | 33 | 581 | 7 | 564 | 2.02e-70 | 239 |
| MS.gene45440.t1 | MTR_5g085850 | 29.380 | 548 | 360 | 10 | 38 | 570 | 28 | 563 | 2.20e-70 | 239 |
| MS.gene45440.t1 | MTR_8g038880 | 31.743 | 545 | 333 | 10 | 33 | 554 | 13 | 541 | 7.09e-70 | 237 |
| MS.gene45440.t1 | MTR_7g111260 | 29.764 | 551 | 363 | 12 | 32 | 568 | 11 | 551 | 1.11e-69 | 237 |
| MS.gene45440.t1 | MTR_1g085090 | 28.744 | 581 | 381 | 15 | 23 | 581 | 3 | 572 | 1.55e-69 | 237 |
| MS.gene45440.t1 | MTR_8g087810 | 31.058 | 586 | 359 | 18 | 22 | 568 | 6 | 585 | 1.74e-69 | 237 |
| MS.gene45440.t1 | MTR_8g087780 | 30.556 | 576 | 359 | 16 | 19 | 560 | 3 | 571 | 6.83e-69 | 235 |
| MS.gene45440.t1 | MTR_4g101380 | 29.656 | 553 | 346 | 14 | 38 | 557 | 25 | 567 | 2.49e-68 | 234 |
| MS.gene45440.t1 | MTR_7g013270 | 29.558 | 565 | 362 | 14 | 39 | 578 | 89 | 642 | 2.70e-68 | 235 |
| MS.gene45440.t1 | MTR_4g033375 | 30.632 | 506 | 318 | 10 | 15 | 506 | 10 | 496 | 3.80e-68 | 231 |
| MS.gene45440.t1 | MTR_3g072300 | 28.870 | 575 | 365 | 17 | 12 | 560 | 2 | 558 | 4.03e-68 | 233 |
| MS.gene45440.t1 | MTR_7g098230 | 29.636 | 550 | 340 | 15 | 54 | 571 | 40 | 574 | 1.21e-67 | 232 |
| MS.gene45440.t1 | MTR_1g075440 | 29.656 | 553 | 344 | 13 | 38 | 560 | 26 | 563 | 7.03e-67 | 230 |
| MS.gene45440.t1 | MTR_7g098040 | 29.670 | 546 | 341 | 14 | 49 | 565 | 43 | 574 | 1.14e-66 | 230 |
| MS.gene45440.t1 | MTR_5g012290 | 29.965 | 564 | 339 | 17 | 36 | 560 | 21 | 567 | 1.41e-66 | 229 |
| MS.gene45440.t1 | MTR_3g100980 | 30.263 | 608 | 343 | 17 | 33 | 581 | 7 | 592 | 2.24e-66 | 229 |
| MS.gene45440.t1 | MTR_7g098160 | 29.423 | 537 | 338 | 12 | 49 | 557 | 42 | 565 | 3.34e-66 | 228 |
| MS.gene45440.t1 | MTR_4g098800 | 28.829 | 555 | 357 | 16 | 50 | 580 | 46 | 586 | 7.92e-66 | 227 |
| MS.gene45440.t1 | MTR_4g098800 | 27.926 | 598 | 386 | 18 | 9 | 580 | 73 | 651 | 1.31e-65 | 228 |
| MS.gene45440.t1 | MTR_4g033325 | 30.501 | 459 | 286 | 9 | 117 | 560 | 10 | 450 | 2.51e-65 | 222 |
| MS.gene45440.t1 | MTR_7g098090 | 29.336 | 542 | 337 | 13 | 49 | 557 | 42 | 570 | 2.80e-65 | 226 |
| MS.gene45440.t1 | MTR_7g098220 | 28.966 | 580 | 366 | 11 | 9 | 560 | 4 | 565 | 1.67e-64 | 224 |
| MS.gene45440.t1 | MTR_4g033395 | 29.644 | 506 | 313 | 10 | 22 | 508 | 17 | 498 | 4.44e-64 | 220 |
| MS.gene45440.t1 | MTR_1g042310 | 29.603 | 554 | 343 | 16 | 38 | 560 | 24 | 561 | 6.73e-64 | 222 |
| MS.gene45440.t1 | MTR_1g041875 | 30.286 | 525 | 326 | 15 | 38 | 538 | 27 | 535 | 8.45e-64 | 221 |
| MS.gene45440.t1 | MTR_4g033385 | 29.801 | 453 | 282 | 8 | 125 | 560 | 16 | 449 | 1.54e-63 | 218 |
| MS.gene45440.t1 | MTR_1g042310 | 30.263 | 532 | 324 | 16 | 60 | 560 | 2 | 517 | 1.67e-62 | 217 |
| MS.gene45440.t1 | MTR_1g042310 | 30.263 | 532 | 324 | 16 | 60 | 560 | 9 | 524 | 1.87e-62 | 217 |
| MS.gene45440.t1 | MTR_4g033325 | 30.068 | 439 | 275 | 8 | 137 | 560 | 3 | 424 | 2.36e-62 | 213 |
| MS.gene45440.t1 | MTR_7g098180 | 28.966 | 580 | 358 | 13 | 8 | 557 | 9 | 564 | 2.39e-62 | 218 |
| MS.gene45440.t1 | MTR_2g005130 | 28.866 | 582 | 377 | 15 | 4 | 568 | 9 | 570 | 2.44e-62 | 218 |
| MS.gene45440.t1 | MTR_1g041885 | 29.622 | 503 | 314 | 15 | 60 | 538 | 2 | 488 | 7.91e-62 | 215 |
| MS.gene45440.t1 | MTR_7g098220 | 29.868 | 529 | 330 | 9 | 60 | 560 | 6 | 521 | 2.11e-61 | 214 |
| MS.gene45440.t1 | MTR_4g107670 | 28.136 | 558 | 347 | 15 | 40 | 559 | 24 | 565 | 9.41e-60 | 210 |
| MS.gene45440.t1 | MTR_1g041815 | 29.128 | 539 | 342 | 12 | 49 | 560 | 36 | 561 | 3.52e-59 | 209 |
| MS.gene45440.t1 | MTR_4g123537 | 29.277 | 567 | 361 | 18 | 13 | 560 | 22 | 567 | 1.48e-58 | 207 |
| MS.gene45440.t1 | MTR_7g010820 | 28.893 | 533 | 337 | 15 | 38 | 538 | 24 | 546 | 1.79e-58 | 207 |
| MS.gene45440.t1 | MTR_1g041835 | 28.727 | 550 | 352 | 13 | 38 | 560 | 25 | 561 | 1.91e-58 | 207 |
| MS.gene45440.t1 | MTR_5g038380 | 28.114 | 562 | 341 | 15 | 40 | 559 | 28 | 568 | 1.53e-57 | 204 |
| MS.gene45440.t1 | MTR_7g098200 | 29.241 | 448 | 287 | 9 | 142 | 571 | 28 | 463 | 1.89e-55 | 196 |
| MS.gene45440.t1 | MTR_8g469310 | 27.728 | 559 | 346 | 15 | 40 | 559 | 26 | 565 | 1.37e-54 | 196 |
| MS.gene45440.t1 | MTR_6g008690 | 27.788 | 529 | 327 | 14 | 63 | 560 | 30 | 534 | 2.46e-51 | 186 |
| MS.gene45440.t1 | MTR_7g098150 | 28.266 | 421 | 266 | 11 | 49 | 447 | 42 | 448 | 2.51e-42 | 160 |
| MS.gene45440.t1 | MTR_4g033310 | 29.012 | 324 | 205 | 7 | 249 | 560 | 176 | 486 | 3.41e-42 | 160 |
| MS.gene45440.t1 | MTR_4g033310 | 38.854 | 157 | 93 | 3 | 49 | 205 | 40 | 193 | 2.25e-17 | 85.9 |
| MS.gene45440.t1 | MTR_7g098210 | 26.255 | 518 | 271 | 14 | 62 | 555 | 4 | 434 | 2.78e-39 | 150 |
| MS.gene45440.t1 | MTR_7g052600 | 24.157 | 534 | 363 | 13 | 38 | 560 | 23 | 525 | 6.64e-36 | 142 |
| MS.gene45440.t1 | MTR_7g051880 | 24.532 | 534 | 349 | 15 | 38 | 554 | 23 | 519 | 1.50e-34 | 138 |
| MS.gene45440.t1 | MTR_4g024930 | 23.951 | 572 | 385 | 16 | 13 | 560 | 7 | 552 | 3.45e-34 | 137 |
| MS.gene45440.t1 | MTR_7g051830 | 23.783 | 534 | 365 | 13 | 38 | 560 | 23 | 525 | 2.26e-32 | 132 |
| MS.gene45440.t1 | MTR_8g091265 | 41.284 | 109 | 58 | 4 | 298 | 402 | 3 | 109 | 1.71e-17 | 80.1 |
| MS.gene45440.t1 | MTR_3g065350 | 30.625 | 160 | 105 | 4 | 340 | 495 | 1 | 158 | 4.52e-15 | 73.9 |
| MS.gene45440.t1 | MTR_4g051568 | 73.810 | 42 | 11 | 0 | 566 | 607 | 65 | 106 | 4.71e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45440.t1 | AT1G52190 | 49.741 | 579 | 260 | 8 | 15 | 568 | 2 | 574 | 0.0 | 591 |
| MS.gene45440.t1 | AT3G16180 | 50.598 | 585 | 261 | 12 | 23 | 581 | 3 | 585 | 0.0 | 582 |
| MS.gene45440.t1 | AT5G11570 | 38.806 | 536 | 241 | 12 | 41 | 561 | 14 | 477 | 2.44e-110 | 341 |
| MS.gene45440.t1 | AT1G69870 | 34.249 | 546 | 333 | 10 | 38 | 560 | 49 | 591 | 5.66e-109 | 342 |
| MS.gene45440.t1 | AT1G62200 | 37.407 | 540 | 309 | 12 | 38 | 556 | 50 | 581 | 9.78e-108 | 338 |
| MS.gene45440.t1 | AT1G68570 | 35.478 | 575 | 337 | 11 | 15 | 562 | 2 | 569 | 4.97e-107 | 336 |
| MS.gene45440.t1 | AT2G02040 | 35.584 | 548 | 320 | 14 | 38 | 560 | 39 | 578 | 7.94e-103 | 325 |
| MS.gene45440.t1 | AT1G62200 | 36.155 | 567 | 308 | 13 | 38 | 556 | 50 | 610 | 1.94e-102 | 325 |
| MS.gene45440.t1 | AT1G62200 | 36.155 | 567 | 308 | 13 | 38 | 556 | 64 | 624 | 2.87e-102 | 325 |
| MS.gene45440.t1 | AT1G27080 | 32.852 | 554 | 343 | 12 | 37 | 568 | 11 | 557 | 1.13e-101 | 322 |
| MS.gene45440.t1 | AT5G62680 | 33.118 | 619 | 353 | 14 | 8 | 576 | 5 | 612 | 2.70e-99 | 317 |
| MS.gene45440.t1 | AT1G18880 | 32.904 | 544 | 337 | 8 | 43 | 560 | 22 | 563 | 7.04e-98 | 312 |
| MS.gene45440.t1 | AT3G54140 | 34.735 | 547 | 325 | 14 | 38 | 560 | 22 | 560 | 5.87e-97 | 309 |
| MS.gene45440.t1 | AT3G54140 | 34.735 | 547 | 325 | 14 | 38 | 560 | 22 | 560 | 5.87e-97 | 309 |
| MS.gene45440.t1 | AT1G68570 | 35.130 | 538 | 319 | 10 | 52 | 562 | 5 | 539 | 3.10e-96 | 307 |
| MS.gene45440.t1 | AT3G47960 | 33.752 | 557 | 332 | 12 | 36 | 560 | 54 | 605 | 6.12e-96 | 308 |
| MS.gene45440.t1 | AT1G27080 | 32.759 | 522 | 322 | 12 | 69 | 568 | 1 | 515 | 2.29e-93 | 298 |
| MS.gene45440.t1 | AT5G01180 | 32.836 | 536 | 337 | 8 | 38 | 554 | 23 | 554 | 1.63e-91 | 295 |
| MS.gene45440.t1 | AT5G01180 | 32.836 | 536 | 337 | 8 | 38 | 554 | 23 | 554 | 1.63e-91 | 295 |
| MS.gene45440.t1 | AT5G01180 | 32.836 | 536 | 337 | 8 | 38 | 554 | 23 | 554 | 1.63e-91 | 295 |
| MS.gene45440.t1 | AT5G28470 | 31.844 | 537 | 340 | 12 | 38 | 553 | 15 | 546 | 9.55e-89 | 287 |
| MS.gene45440.t1 | AT3G45650 | 33.394 | 545 | 323 | 11 | 35 | 560 | 17 | 540 | 2.54e-86 | 281 |
| MS.gene45440.t1 | AT2G02020 | 32.902 | 541 | 305 | 13 | 38 | 560 | 40 | 540 | 3.87e-86 | 280 |
| MS.gene45440.t1 | AT5G28470 | 31.657 | 537 | 339 | 13 | 38 | 553 | 15 | 544 | 7.79e-86 | 280 |
| MS.gene45440.t1 | AT3G45650 | 31.874 | 571 | 323 | 12 | 35 | 560 | 17 | 566 | 8.93e-81 | 267 |
| MS.gene45440.t1 | AT3G45660 | 31.550 | 542 | 329 | 12 | 39 | 560 | 20 | 539 | 1.86e-79 | 263 |
| MS.gene45440.t1 | AT3G45660 | 31.550 | 542 | 329 | 12 | 39 | 560 | 20 | 539 | 1.86e-79 | 263 |
| MS.gene45440.t1 | AT3G45660 | 31.550 | 542 | 329 | 12 | 39 | 560 | 41 | 560 | 4.61e-79 | 262 |
| MS.gene45440.t1 | AT3G45710 | 30.939 | 543 | 341 | 11 | 35 | 560 | 16 | 541 | 7.11e-79 | 261 |
| MS.gene45440.t1 | AT3G54450 | 30.106 | 568 | 352 | 10 | 38 | 584 | 10 | 553 | 1.80e-77 | 257 |
| MS.gene45440.t1 | AT2G26690 | 31.852 | 540 | 349 | 10 | 38 | 562 | 22 | 557 | 2.66e-77 | 257 |
| MS.gene45440.t1 | AT3G45680 | 32.491 | 554 | 336 | 13 | 23 | 560 | 8 | 539 | 1.58e-76 | 255 |
| MS.gene45440.t1 | AT3G45720 | 31.099 | 537 | 336 | 12 | 40 | 560 | 19 | 537 | 3.50e-76 | 254 |
| MS.gene45440.t1 | AT1G69860 | 31.985 | 544 | 336 | 13 | 38 | 560 | 16 | 546 | 4.27e-75 | 251 |
| MS.gene45440.t1 | AT1G72125 | 31.638 | 531 | 329 | 10 | 49 | 560 | 38 | 553 | 7.47e-75 | 250 |
| MS.gene45440.t1 | AT2G26690 | 32.061 | 524 | 337 | 10 | 54 | 562 | 5 | 524 | 1.85e-74 | 249 |
| MS.gene45440.t1 | AT3G53960 | 28.952 | 601 | 391 | 15 | 7 | 584 | 6 | 593 | 9.41e-74 | 249 |
| MS.gene45440.t1 | AT2G26690 | 32.364 | 516 | 330 | 10 | 62 | 562 | 1 | 512 | 1.17e-73 | 246 |
| MS.gene45440.t1 | AT3G45700 | 30.175 | 570 | 349 | 14 | 31 | 583 | 7 | 544 | 1.54e-73 | 246 |
| MS.gene45440.t1 | AT5G13400 | 31.009 | 545 | 340 | 9 | 40 | 554 | 64 | 602 | 1.75e-73 | 248 |
| MS.gene45440.t1 | AT2G37900 | 28.774 | 563 | 371 | 15 | 11 | 557 | 12 | 560 | 3.43e-72 | 244 |
| MS.gene45440.t1 | AT1G32450 | 27.649 | 604 | 402 | 14 | 12 | 584 | 5 | 604 | 5.47e-70 | 239 |
| MS.gene45440.t1 | AT1G22540 | 30.882 | 544 | 333 | 11 | 38 | 560 | 28 | 549 | 1.40e-69 | 236 |
| MS.gene45440.t1 | AT1G72130 | 30.556 | 540 | 326 | 14 | 38 | 560 | 23 | 530 | 4.09e-69 | 234 |
| MS.gene45440.t1 | AT2G37900 | 30.041 | 486 | 307 | 14 | 91 | 557 | 10 | 481 | 1.32e-68 | 232 |
| MS.gene45440.t1 | AT2G02020 | 30.556 | 540 | 298 | 15 | 38 | 560 | 40 | 519 | 1.68e-68 | 233 |
| MS.gene45440.t1 | AT1G22570 | 30.989 | 526 | 318 | 11 | 42 | 541 | 32 | 538 | 2.29e-68 | 233 |
| MS.gene45440.t1 | AT1G59740 | 29.597 | 571 | 368 | 14 | 10 | 557 | 12 | 571 | 4.49e-68 | 233 |
| MS.gene45440.t1 | AT5G46050 | 29.443 | 557 | 342 | 14 | 12 | 538 | 4 | 539 | 4.65e-68 | 233 |
| MS.gene45440.t1 | AT1G22550 | 29.412 | 544 | 340 | 10 | 42 | 560 | 32 | 556 | 3.74e-67 | 230 |
| MS.gene45440.t1 | AT1G12110 | 30.325 | 554 | 343 | 13 | 38 | 560 | 25 | 566 | 4.10e-67 | 231 |
| MS.gene45440.t1 | AT1G22570 | 30.739 | 514 | 311 | 11 | 54 | 541 | 7 | 501 | 2.24e-66 | 227 |
| MS.gene45440.t1 | AT1G72140 | 28.522 | 582 | 332 | 16 | 18 | 560 | 15 | 551 | 2.59e-66 | 228 |
| MS.gene45440.t1 | AT1G33440 | 29.066 | 578 | 368 | 12 | 36 | 583 | 32 | 597 | 3.72e-66 | 228 |
| MS.gene45440.t1 | AT4G21680 | 27.920 | 548 | 359 | 13 | 42 | 560 | 30 | 570 | 3.63e-65 | 225 |
| MS.gene45440.t1 | AT5G46040 | 30.250 | 519 | 318 | 12 | 49 | 538 | 36 | 539 | 4.55e-65 | 225 |
| MS.gene45440.t1 | AT3G21670 | 29.104 | 536 | 353 | 10 | 37 | 555 | 25 | 550 | 4.83e-65 | 225 |
| MS.gene45440.t1 | AT1G27040 | 29.927 | 548 | 337 | 12 | 40 | 559 | 23 | 551 | 1.47e-64 | 223 |
| MS.gene45440.t1 | AT1G27040 | 29.927 | 548 | 337 | 12 | 40 | 559 | 27 | 555 | 1.49e-64 | 223 |
| MS.gene45440.t1 | AT1G72120 | 29.260 | 581 | 358 | 13 | 1 | 560 | 1 | 549 | 2.28e-64 | 222 |
| MS.gene45440.t1 | AT5G14940 | 29.834 | 543 | 342 | 13 | 38 | 555 | 5 | 533 | 1.19e-62 | 218 |
| MS.gene45440.t1 | AT2G40460 | 28.517 | 526 | 336 | 12 | 49 | 550 | 33 | 542 | 1.77e-61 | 215 |
| MS.gene45440.t1 | AT1G27040 | 29.851 | 536 | 329 | 12 | 52 | 559 | 7 | 523 | 1.06e-60 | 212 |
| MS.gene45440.t1 | AT5G19640 | 28.782 | 542 | 346 | 15 | 42 | 562 | 61 | 583 | 2.70e-60 | 213 |
| MS.gene45440.t1 | AT5G46050 | 30.769 | 416 | 260 | 9 | 139 | 538 | 24 | 427 | 1.97e-56 | 199 |
| MS.gene45440.t1 | AT3G45690 | 28.597 | 563 | 326 | 17 | 36 | 582 | 14 | 516 | 3.37e-56 | 199 |
| MS.gene45440.t1 | AT3G01350 | 27.083 | 576 | 367 | 14 | 38 | 580 | 5 | 560 | 1.50e-55 | 198 |
| MS.gene45440.t1 | AT5G62730 | 28.675 | 551 | 335 | 15 | 40 | 559 | 56 | 579 | 1.88e-55 | 199 |
| MS.gene45440.t1 | AT1G72130 | 31.106 | 434 | 257 | 11 | 142 | 560 | 6 | 412 | 3.63e-53 | 188 |
| MS.gene45440.t1 | AT1G72130 | 31.106 | 434 | 257 | 11 | 142 | 560 | 6 | 412 | 3.63e-53 | 188 |
| MS.gene45440.t1 | AT5G62730 | 28.336 | 547 | 334 | 15 | 44 | 559 | 1 | 520 | 7.08e-53 | 190 |
| MS.gene45440.t1 | AT1G69850 | 27.551 | 588 | 365 | 18 | 17 | 559 | 2 | 573 | 2.23e-51 | 187 |
| MS.gene45440.t1 | AT3G25260 | 25.000 | 560 | 361 | 14 | 9 | 559 | 3 | 512 | 1.47e-50 | 184 |
| MS.gene45440.t1 | AT3G25280 | 24.851 | 503 | 336 | 12 | 67 | 559 | 48 | 518 | 1.70e-39 | 152 |
| MS.gene45440.t1 | AT2G38100 | 24.427 | 524 | 324 | 21 | 68 | 560 | 2 | 484 | 1.29e-23 | 105 |
| MS.gene45440.t1 | AT2G38100 | 24.427 | 524 | 324 | 21 | 68 | 560 | 18 | 500 | 2.41e-23 | 104 |
| MS.gene45440.t1 | AT2G38100 | 24.427 | 524 | 324 | 21 | 68 | 560 | 24 | 506 | 2.91e-23 | 104 |
Find 139 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGTTGCTGCTTCGCTTTC+TGG | 0.093260 | 1.3:+42258729 | MS.gene45440:CDS |
| CTGTATAATAAAACTCATTT+TGG | 0.135749 | 1.3:-42258686 | None:intergenic |
| GAACAAAGCTTGTGTTATTA+AGG | 0.192435 | 1.3:+42258164 | MS.gene45440:CDS |
| TCCAAGACCCTATTGTTATT+AGG | 0.209799 | 1.3:-42257736 | None:intergenic |
| CTAAATAATAGAGTATATTA+AGG | 0.236749 | 1.3:-42258905 | None:intergenic |
| CCAAGACCCTATTGTTATTA+GGG | 0.240592 | 1.3:-42257735 | None:intergenic |
| TCATCCTTTGAGTCACCTTT+GGG | 0.266149 | 1.3:-42259389 | None:intergenic |
| TTCTTTGCACTGATCGTAAC+TGG | 0.278436 | 1.3:-42258495 | None:intergenic |
| TTCATCCTTTGAGTCACCTT+TGG | 0.294240 | 1.3:-42259390 | None:intergenic |
| AGGTTCTGCTGTCAGTTTCC+TGG | 0.294557 | 1.3:+42256715 | MS.gene45440:CDS |
| GTATATATCCAAGATCATTT+TGG | 0.295506 | 1.3:+42257823 | MS.gene45440:CDS |
| TTAGTTTGCAGTTGGGCTTA+TGG | 0.299490 | 1.3:+42258924 | MS.gene45440:CDS |
| TTTGGTTGGAAAATTGGTTT+TGG | 0.301389 | 1.3:+42257841 | MS.gene45440:CDS |
| AAATGCGAACGATGGAGTTT+TGG | 0.301463 | 1.3:+42258593 | MS.gene45440:CDS |
| GCTGCTTCGCTTTCTGGATT+GGG | 0.319848 | 1.3:+42258735 | MS.gene45440:CDS |
| TCCTACATCGCTCAGATTCC+CGG | 0.320230 | 1.3:-42259444 | None:intergenic |
| TTGTGAGAGTTATTCCATTA+TGG | 0.321111 | 1.3:+42258274 | MS.gene45440:CDS |
| ATCACTATGCCTTTCATCAT+TGG | 0.322422 | 1.3:+42253298 | MS.gene45440:CDS |
| TGCTGCTTCGCTTTCTGGAT+TGG | 0.335882 | 1.3:+42258734 | MS.gene45440:CDS |
| AAGATAACCCTAATAACAAT+AGG | 0.342050 | 1.3:+42257728 | MS.gene45440:CDS |
| ATATAGGTACGGTAATTATA+TGG | 0.342184 | 1.3:+42258418 | MS.gene45440:CDS |
| ATCTACTGTGCATAGATTCC+AGG | 0.353747 | 1.3:-42258229 | None:intergenic |
| AAATACTCTTGGCTTATAAC+TGG | 0.364606 | 1.3:+42258873 | MS.gene45440:CDS |
| TTTAGTCTCATGTCAATTGC+AGG | 0.365344 | 1.3:+42257655 | MS.gene45440:CDS |
| AACAAGGAAGTTCAATATTC+AGG | 0.367984 | 1.3:+42253232 | MS.gene45440:CDS |
| CCTTTAGCATCGAAGATAAG+AGG | 0.383147 | 1.3:+42258468 | MS.gene45440:CDS |
| AACCACAGGCATGAACTTGC+TGG | 0.394025 | 1.3:-42256642 | None:intergenic |
| CGATTCTTAAGTGTTGGATT+AGG | 0.396315 | 1.3:+42256695 | MS.gene45440:CDS |
| GTTTCATGTTCCATGGCATT+TGG | 0.404377 | 1.3:+42257685 | MS.gene45440:CDS |
| ATCAAATACAATATCATGTT+GGG | 0.404738 | 1.3:-42256560 | None:intergenic |
| GCAAAGAAAAGAATGGGAAT+TGG | 0.406768 | 1.3:+42258510 | MS.gene45440:CDS |
| TTTGTTGCAGATTCTTATCT+CGG | 0.407995 | 1.3:+42256671 | MS.gene45440:CDS |
| CTCGGTCGATTCTTAAGTGT+TGG | 0.411486 | 1.3:+42256689 | MS.gene45440:CDS |
| CCTCTTATCTTCGATGCTAA+AGG | 0.412800 | 1.3:-42258468 | None:intergenic |
| GGACCTTTCAAGCTTCATCT+TGG | 0.414516 | 1.3:+42256584 | MS.gene45440:CDS |
| CCCTAATAACAATAGGGTCT+TGG | 0.418911 | 1.3:+42257735 | MS.gene45440:CDS |
| CTATTATTTAGTTTGCAGTT+GGG | 0.422804 | 1.3:+42258917 | MS.gene45440:CDS |
| TCAATATTCAGGTGGTGAAA+TGG | 0.423861 | 1.3:+42253243 | MS.gene45440:CDS |
| CAACATGATATTGTATTTGA+TGG | 0.424400 | 1.3:+42256562 | MS.gene45440:CDS |
| TCTTTGAGCGTTATCAATAT+AGG | 0.428181 | 1.3:+42258402 | MS.gene45440:CDS |
| TCTGGATTGGGAATGGCTGC+AGG | 0.429137 | 1.3:+42258747 | MS.gene45440:CDS |
| TCTGAAGCAGTCAATTTCAT+AGG | 0.436089 | 1.3:+42258663 | MS.gene45440:CDS |
| GCACCTCAACTTTGTCTAGC+TGG | 0.440258 | 1.3:+42258636 | MS.gene45440:CDS |
| TCTATTATTTAGTTTGCAGT+TGG | 0.444992 | 1.3:+42258916 | MS.gene45440:CDS |
| ATGATCCCACTAGACCATAA+TGG | 0.450318 | 1.3:-42258288 | None:intergenic |
| TTCGCTTTCTGGATTGGGAA+TGG | 0.452382 | 1.3:+42258740 | MS.gene45440:CDS |
| TGCTGGCTGCAGCAGATAAG+AGG | 0.457100 | 1.3:-42256625 | None:intergenic |
| TCTTGATCTTCTTGTTGCAA+TGG | 0.457986 | 1.3:-42253187 | None:intergenic |
| ATCACCAACATCATGGGAAA+TGG | 0.460646 | 1.3:+42257615 | MS.gene45440:CDS |
| GGAGGTGATATGTCTGTTCA+AGG | 0.462389 | 1.3:-42258358 | None:intergenic |
| ATCAGTGCAAAGAAAAGAAT+GGG | 0.469148 | 1.3:+42258504 | MS.gene45440:CDS |
| AGATAACCCTAATAACAATA+GGG | 0.471415 | 1.3:+42257729 | MS.gene45440:CDS |
| CGCTGGAACTTCAAAGTTGG+AGG | 0.472600 | 1.3:-42258376 | None:intergenic |
| AGGCCACCCTTGCGTCTTTG+TGG | 0.477264 | 1.3:-42253274 | None:intergenic |
| GATCAGTGCAAAGAAAAGAA+TGG | 0.478546 | 1.3:+42258503 | MS.gene45440:CDS |
| TAAATAATAGAGTATATTAA+GGG | 0.480488 | 1.3:-42258904 | None:intergenic |
| ACCTACCTTAGTTTATCAGT+TGG | 0.486210 | 1.3:-42258066 | None:intergenic |
| AGGTGAGCCGCCCTCGAGAA+GGG | 0.488439 | 1.3:+42259684 | MS.gene45440:CDS |
| ACTTCAAGAGGAGGAAAAGA+TGG | 0.489744 | 1.3:+42258813 | MS.gene45440:CDS |
| TTCCATCATTTAGCTCAAGC+AGG | 0.490071 | 1.3:+42259664 | MS.gene45440:intron |
| GCGATCAATCACCAACATCA+TGG | 0.496498 | 1.3:+42257608 | MS.gene45440:CDS |
| CTCATGTCAATTGCAGGTGC+TGG | 0.499541 | 1.3:+42257661 | MS.gene45440:CDS |
| TGCTGGTGTTTCATGTTCCA+TGG | 0.501696 | 1.3:+42257678 | MS.gene45440:CDS |
| GGGAATGGCTGCAGGAAGCT+TGG | 0.503502 | 1.3:+42258755 | MS.gene45440:CDS |
| CTTGGCAATACTGCAAGCTT+AGG | 0.510734 | 1.3:+42256530 | MS.gene45440:CDS |
| ATGATGACCCTTAGCATTGG+AGG | 0.512129 | 1.3:+42258309 | MS.gene45440:CDS |
| TCCCGCTGGAACTTCAAAGT+TGG | 0.516812 | 1.3:-42258379 | None:intergenic |
| TGATGAAAGGCATAGTGATA+AGG | 0.520223 | 1.3:-42253294 | None:intergenic |
| CAGGTGAGCCGCCCTCGAGA+AGG | 0.521112 | 1.3:+42259683 | MS.gene45440:CDS |
| CATCAAATACAATATCATGT+TGG | 0.523970 | 1.3:-42256561 | None:intergenic |
| TTACTTAACTCTTCAACTGC+AGG | 0.526205 | 1.3:-42258948 | None:intergenic |
| GTGTGCAATTCCTTGTCCAA+CGG | 0.527435 | 1.3:-42259713 | None:intergenic |
| GCAACACTAGACATAGTACT+TGG | 0.530889 | 1.3:-42258714 | None:intergenic |
| AACATGATATTGTATTTGAT+GGG | 0.530924 | 1.3:+42256563 | MS.gene45440:CDS |
| TCTCCAAGATGAAGCTTGAA+AGG | 0.532522 | 1.3:-42256587 | None:intergenic |
| CATCCTTTGAGTCACCTTTG+GGG | 0.536258 | 1.3:-42259388 | None:intergenic |
| TCGAGAAGGGGTCTAGCCGT+TGG | 0.537253 | 1.3:+42259697 | MS.gene45440:CDS |
| GTTATTCCATTATGGTCTAG+TGG | 0.537272 | 1.3:+42258282 | MS.gene45440:CDS |
| CGCAAAACTAGCGAACAAGT+TGG | 0.540410 | 1.3:-42257944 | None:intergenic |
| CGATCAATCACCAACATCAT+GGG | 0.540764 | 1.3:+42257609 | MS.gene45440:CDS |
| TATTTATACACTCAACAGCC+CGG | 0.541564 | 1.3:+42259425 | MS.gene45440:CDS |
| AAAATGAGCCTCCAATGCTA+AGG | 0.543292 | 1.3:-42258317 | None:intergenic |
| ATGGTTCAAGAATAAACCCC+TGG | 0.543754 | 1.3:+42258211 | MS.gene45440:CDS |
| GTGATTGTTTGCAGCAAATG+AGG | 0.544320 | 1.3:+42256505 | MS.gene45440:intron |
| CCTACATCGCTCAGATTCCC+GGG | 0.549420 | 1.3:-42259443 | None:intergenic |
| TGCAATTGACATGAGACTAA+AGG | 0.550395 | 1.3:-42257653 | None:intergenic |
| TGGTTCCAACTGATAAACTA+AGG | 0.551260 | 1.3:+42258061 | MS.gene45440:CDS |
| CAAGTGTCGTACACATGGAA+TGG | 0.554242 | 1.3:+42259765 | MS.gene45440:CDS |
| AACGGCTAGACCCCTTCTCG+AGG | 0.554905 | 1.3:-42259695 | None:intergenic |
| CTTTAGCATCGAAGATAAGA+GGG | 0.558229 | 1.3:+42258469 | MS.gene45440:CDS |
| TTTGCAGCAAATGAGGCACT+TGG | 0.561736 | 1.3:+42256512 | MS.gene45440:intron |
| ATCATGATGACCCTTAGCAT+TGG | 0.562857 | 1.3:+42258306 | MS.gene45440:CDS |
| TTATTCCATTATGGTCTAGT+GGG | 0.564458 | 1.3:+42258283 | MS.gene45440:CDS |
| TCTACTGTGCATAGATTCCA+GGG | 0.566589 | 1.3:-42258228 | None:intergenic |
| TCGCGCAAGTGTCGTACACA+TGG | 0.567352 | 1.3:+42259760 | MS.gene45440:CDS |
| GGTGATTGATCGCCTTCCGT+TGG | 0.568053 | 1.3:-42257598 | None:intergenic |
| TTGTTGTGATGGTAAAATTG+AGG | 0.569745 | 1.3:-42258024 | None:intergenic |
| GAACAAGATATAGCATGTGA+TGG | 0.572383 | 1.3:+42258192 | MS.gene45440:CDS |
| GGTGAGCCGCCCTCGAGAAG+GGG | 0.575345 | 1.3:+42259685 | MS.gene45440:CDS |
| TTCTCAACCACAAAGACGCA+AGG | 0.576475 | 1.3:+42253267 | MS.gene45440:CDS |
| CCCGGGAATCTGAGCGATGT+AGG | 0.576864 | 1.3:+42259443 | MS.gene45440:CDS |
| AGCAAGTTCATGCCTGTGGT+TGG | 0.578750 | 1.3:+42256644 | MS.gene45440:CDS |
| GAGCGTTATCAATATAGGTA+CGG | 0.578923 | 1.3:+42258407 | MS.gene45440:CDS |
| TCCAACTTTGAAGTTCCAGC+GGG | 0.578991 | 1.3:+42258378 | MS.gene45440:CDS |
| GATTTCTGATGATATTAACA+AGG | 0.586027 | 1.3:+42258839 | MS.gene45440:CDS |
| TTGGTCTGCACCAAATGCCA+TGG | 0.588107 | 1.3:-42257695 | None:intergenic |
| AGGGGTCTAGCCGTTGGACA+AGG | 0.590510 | 1.3:+42259703 | MS.gene45440:CDS |
| CATCCCCAAAGGTGACTCAA+AGG | 0.592830 | 1.3:+42259385 | MS.gene45440:CDS |
| ATTGCCATTTCCCATGATGT+TGG | 0.593954 | 1.3:-42257619 | None:intergenic |
| GATTTGAGTCCTTGTTGTGA+TGG | 0.596972 | 1.3:-42258035 | None:intergenic |
| TACAGGGAATGGCATTGTTG+TGG | 0.598433 | 1.3:+42257557 | MS.gene45440:intron |
| GTAGAAAACACTACTTCAAG+AGG | 0.601842 | 1.3:+42258801 | MS.gene45440:CDS |
| ACGGCTAGACCCCTTCTCGA+GGG | 0.602918 | 1.3:-42259694 | None:intergenic |
| GATAACTTACCAATGATGAA+AGG | 0.603026 | 1.3:-42253307 | None:intergenic |
| CTTCAAGAGGAGGAAAAGAT+GGG | 0.604855 | 1.3:+42258814 | MS.gene45440:CDS |
| ATTTATACACTCAACAGCCC+GGG | 0.605783 | 1.3:+42259426 | MS.gene45440:CDS |
| ATAACGCTCAAAGATCCCGC+TGG | 0.608804 | 1.3:-42258393 | None:intergenic |
| AGGAGAAGAAATGCGAACGA+TGG | 0.609047 | 1.3:+42258585 | MS.gene45440:CDS |
| GCAACAAAAGCACCAACCAC+AGG | 0.611443 | 1.3:-42256656 | None:intergenic |
| CTCCAACTTTGAAGTTCCAG+CGG | 0.612248 | 1.3:+42258377 | MS.gene45440:CDS |
| AAATGAGCCTCCAATGCTAA+GGG | 0.618035 | 1.3:-42258316 | None:intergenic |
| AGCCAGCAAGTTCATGCCTG+TGG | 0.625089 | 1.3:+42256640 | MS.gene45440:CDS |
| GAAAACACTACTTCAAGAGG+AGG | 0.636406 | 1.3:+42258804 | MS.gene45440:CDS |
| GCTAGACCCCTTCTCGAGGG+CGG | 0.645555 | 1.3:-42259691 | None:intergenic |
| AACAGCAATGATCAAACCAA+CGG | 0.645820 | 1.3:+42257582 | MS.gene45440:CDS |
| GACTTGAATCTCATCCCCAA+AGG | 0.649403 | 1.3:+42259374 | MS.gene45440:intron |
| GCAATGATCAAACCAACGGA+AGG | 0.652956 | 1.3:+42257586 | MS.gene45440:CDS |
| ATTTCTGATGATATTAACAA+GGG | 0.659432 | 1.3:+42258840 | MS.gene45440:CDS |
| CAACCACAAAGACGCAAGGG+TGG | 0.668240 | 1.3:+42253271 | MS.gene45440:CDS |
| CAACAAGGACTCAAATCTCG+TGG | 0.669262 | 1.3:+42258041 | MS.gene45440:CDS |
| AAGGAAGTTCAATATTCAGG+TGG | 0.669732 | 1.3:+42253235 | MS.gene45440:CDS |
| TAATGGAATAACTCTCACAA+TGG | 0.677324 | 1.3:-42258271 | None:intergenic |
| CAAGAGGAGGAAAAGATGGG+TGG | 0.679323 | 1.3:+42258817 | MS.gene45440:CDS |
| TCTCAACCACAAAGACGCAA+GGG | 0.686419 | 1.3:+42253268 | MS.gene45440:CDS |
| ATACCAGCTAGACAAAGTTG+AGG | 0.689573 | 1.3:-42258639 | None:intergenic |
| CTACTGTGCATAGATTCCAG+GGG | 0.694955 | 1.3:-42258227 | None:intergenic |
| AGCAAGAAAGAATAACAGTG+TGG | 0.706784 | 1.3:-42257890 | None:intergenic |
| GGACAAGGAATTGCACACAA+AGG | 0.714688 | 1.3:+42259718 | MS.gene45440:CDS |
| ATGCTAAAGGAATAAGAACG+CGG | 0.758334 | 1.3:-42258455 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAAAATTATAATATG+AGG | - | chr1.3:42253746-42253765 | None:intergenic | 10.0% |
| !! | ATTTATATCTTATTCAAAAT+AGG | - | chr1.3:42255234-42255253 | None:intergenic | 10.0% |
| !! | TAAATAATAGAGTATATTAA+GGG | - | chr1.3:42258907-42258926 | None:intergenic | 10.0% |
| !! | TATAAAATCTATTTATTTGT+GGG | + | chr1.3:42253710-42253729 | MS.gene45440:intron | 10.0% |
| !! | TATCTTTATATATTATAACT+TGG | - | chr1.3:42259162-42259181 | None:intergenic | 10.0% |
| !!! | AAATAAATAGATTTTATAGT+GGG | - | chr1.3:42253708-42253727 | None:intergenic | 10.0% |
| !!! | AAGTTTTAGTTTTTATTTTT+GGG | + | chr1.3:42257263-42257282 | MS.gene45440:intron | 10.0% |
| !!! | AATTTTGTTGTATAATAATA+AGG | + | chr1.3:42256472-42256491 | MS.gene45440:intron | 10.0% |
| !!! | CTTTTAATGAAAAATAAAAA+TGG | - | chr1.3:42255077-42255096 | None:intergenic | 10.0% |
| !! | AATCAAACAAAAAGATTATA+AGG | + | chr1.3:42259500-42259519 | MS.gene45440:intron | 15.0% |
| !! | ATATAAATTCTCTATATTGA+CGG | + | chr1.3:42255632-42255651 | MS.gene45440:intron | 15.0% |
| !! | CATTAACTTATCATATTATT+GGG | - | chr1.3:42256261-42256280 | None:intergenic | 15.0% |
| !! | CTAAATAATAGAGTATATTA+AGG | - | chr1.3:42258908-42258927 | None:intergenic | 15.0% |
| !! | CTAATTGAAAAGAATTATTT+GGG | + | chr1.3:42253676-42253695 | MS.gene45440:intron | 15.0% |
| !! | CTATAAAATCTATTTATTTG+TGG | + | chr1.3:42253709-42253728 | MS.gene45440:intron | 15.0% |
| !! | TAATTGAAAAGAATTATTTG+GGG | + | chr1.3:42253677-42253696 | MS.gene45440:intron | 15.0% |
| !! | TCATTAACTTATCATATTAT+TGG | - | chr1.3:42256262-42256281 | None:intergenic | 15.0% |
| !!! | AAAAACATAGAATATTTTGT+CGG | - | chr1.3:42253375-42253394 | None:intergenic | 15.0% |
| !!! | AAATAATTCTTTTCAATTAG+GGG | - | chr1.3:42253676-42253695 | None:intergenic | 15.0% |
| !!! | AATTAACTAATGAAATTTTC+CGG | + | chr1.3:42253501-42253520 | MS.gene45440:intron | 15.0% |
| !!! | ATAAATTTTGGTGAAATATT+CGG | + | chr1.3:42258115-42258134 | MS.gene45440:intron | 15.0% |
| !!! | CAAATAAATAGATTTTATAG+TGG | - | chr1.3:42253709-42253728 | None:intergenic | 15.0% |
| !!! | CAAATAATTCTTTTCAATTA+GGG | - | chr1.3:42253677-42253696 | None:intergenic | 15.0% |
| !!! | GAAGTTTTAGTTTTTATTTT+TGG | + | chr1.3:42257262-42257281 | MS.gene45440:intron | 15.0% |
| !!! | GTTGTTTTTTAAAATGAAAT+CGG | - | chr1.3:42254030-42254049 | None:intergenic | 15.0% |
| !! | AACATGATATTGTATTTGAT+GGG | + | chr1.3:42256563-42256582 | MS.gene45440:CDS | 20.0% |
| !! | AAGAAAATCAAAAACAAAGT+GGG | + | chr1.3:42255792-42255811 | MS.gene45440:intron | 20.0% |
| !! | ATAGAGAAAAGTTCAAAATT+AGG | + | chr1.3:42255434-42255453 | MS.gene45440:intron | 20.0% |
| !! | ATATATAAGCCTATAATTGT+TGG | + | chr1.3:42255733-42255752 | MS.gene45440:intron | 20.0% |
| !! | ATATCTTATTCAAAATAGGT+TGG | - | chr1.3:42255230-42255249 | None:intergenic | 20.0% |
| !! | ATCAAATACAATATCATGTT+GGG | - | chr1.3:42256563-42256582 | None:intergenic | 20.0% |
| !! | ATTTCTGATGATATTAACAA+GGG | + | chr1.3:42258840-42258859 | MS.gene45440:CDS | 20.0% |
| !! | CCTAATTGAAAAGAATTATT+TGG | + | chr1.3:42253675-42253694 | MS.gene45440:intron | 20.0% |
| !! | GAATATTTCACCAAAATTTA+TGG | - | chr1.3:42258116-42258135 | None:intergenic | 20.0% |
| !! | TACAAATCAAAAAATCAACA+AGG | + | chr1.3:42253216-42253235 | MS.gene45440:CDS | 20.0% |
| !! | TATAAGGTTATCTTAGATAA+GGG | + | chr1.3:42259516-42259535 | MS.gene45440:intron | 20.0% |
| !! | TTATAAGGTTATCTTAGATA+AGG | + | chr1.3:42259515-42259534 | MS.gene45440:intron | 20.0% |
| !! | TTCATAGGTAAATAGTTTAT+TGG | - | chr1.3:42256935-42256954 | None:intergenic | 20.0% |
| !! | TTGAATCTAAACTGTTAATT+TGG | + | chr1.3:42254873-42254892 | MS.gene45440:intron | 20.0% |
| !!! | AATAATTCTTTTCAATTAGG+GGG | - | chr1.3:42253675-42253694 | None:intergenic | 20.0% |
| !!! | AATTAGTTGTTTTGAATAAG+AGG | - | chr1.3:42253848-42253867 | None:intergenic | 20.0% |
| !!! | ACAAACATAAGTTTTTTCAT+TGG | + | chr1.3:42257211-42257230 | MS.gene45440:intron | 20.0% |
| !!! | CCAAATAATTCTTTTCAATT+AGG | - | chr1.3:42253678-42253697 | None:intergenic | 20.0% |
| !!! | CTAAATGATGGAATAAATAA+GGG | - | chr1.3:42259657-42259676 | None:intergenic | 20.0% |
| !!! | CTGTATAATAAAACTCATTT+TGG | - | chr1.3:42258689-42258708 | None:intergenic | 20.0% |
| !!! | GGTTATCTTTTATATTTACT+TGG | - | chr1.3:42257717-42257736 | None:intergenic | 20.0% |
| !!! | TAAAATTGAGGTGAATTTTT+AGG | - | chr1.3:42258015-42258034 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTCTTTTTTGAG+AGG | + | chr1.3:42253388-42253407 | MS.gene45440:intron | 20.0% |
| !!! | TTATAATATGAGGCTTTATT+AGG | - | chr1.3:42253736-42253755 | None:intergenic | 20.0% |
| !!! | TTTGCATATTCCATAAATTT+TGG | + | chr1.3:42258103-42258122 | MS.gene45440:intron | 20.0% |
| !!! | TTTTGAATCTTTACATAAAG+AGG | - | chr1.3:42257919-42257938 | None:intergenic | 20.0% |
| ! | AAGAGTTAAGTAAGGATTAA+TGG | + | chr1.3:42258958-42258977 | MS.gene45440:intron | 25.0% |
| ! | AAGATAACCCTAATAACAAT+AGG | + | chr1.3:42257728-42257747 | MS.gene45440:CDS | 25.0% |
| ! | AATCATCAATCTCATTAGAT+TGG | - | chr1.3:42255935-42255954 | None:intergenic | 25.0% |
| ! | ACTAGATTCTTATTACAACA+TGG | - | chr1.3:42259189-42259208 | None:intergenic | 25.0% |
| ! | AGAAAATCAAAAACAAAGTG+GGG | + | chr1.3:42255793-42255812 | MS.gene45440:intron | 25.0% |
| ! | AGAGTAAAATATTCATGATG+AGG | - | chr1.3:42256356-42256375 | None:intergenic | 25.0% |
| ! | AGATAACCCTAATAACAATA+GGG | + | chr1.3:42257729-42257748 | MS.gene45440:CDS | 25.0% |
| ! | ATATAGGTACGGTAATTATA+TGG | + | chr1.3:42258418-42258437 | MS.gene45440:CDS | 25.0% |
| ! | ATCTATCTATCTATCTATTC+TGG | + | chr1.3:42253327-42253346 | MS.gene45440:intron | 25.0% |
| ! | ATTAAGTCTCAAAAATTGTG+TGG | + | chr1.3:42258999-42259018 | MS.gene45440:intron | 25.0% |
| ! | ATTTGTGACAAAAACGAATA+TGG | - | chr1.3:42259092-42259111 | None:intergenic | 25.0% |
| ! | CAACATGATATTGTATTTGA+TGG | + | chr1.3:42256562-42256581 | MS.gene45440:CDS | 25.0% |
| ! | CAAGAAAATCAAAAACAAAG+TGG | + | chr1.3:42255791-42255810 | MS.gene45440:intron | 25.0% |
| ! | CATCAAATACAATATCATGT+TGG | - | chr1.3:42256564-42256583 | None:intergenic | 25.0% |
| ! | CATGATGAAATAAGAAAAGT+TGG | + | chr1.3:42257504-42257523 | MS.gene45440:intron | 25.0% |
| ! | CTTAGTTTACCTTGTAAATA+GGG | + | chr1.3:42257152-42257171 | MS.gene45440:intron | 25.0% |
| ! | GATTTCTGATGATATTAACA+AGG | + | chr1.3:42258839-42258858 | MS.gene45440:CDS | 25.0% |
| ! | TATCATTGTTTAATTCTCCA+AGG | - | chr1.3:42256331-42256350 | None:intergenic | 25.0% |
| ! | TATTCTTATTCGTTGTTACA+GGG | + | chr1.3:42257541-42257560 | MS.gene45440:intron | 25.0% |
| ! | TCTTAGTTTACCTTGTAAAT+AGG | + | chr1.3:42257151-42257170 | MS.gene45440:intron | 25.0% |
| ! | TGAATACAAAACACAAACAT+TGG | + | chr1.3:42256958-42256977 | MS.gene45440:intron | 25.0% |
| ! | TGATAAAGATATATACCAAC+CGG | - | chr1.3:42253523-42253542 | None:intergenic | 25.0% |
| ! | TGTAACAACGAATAAGAATA+AGG | - | chr1.3:42257541-42257560 | None:intergenic | 25.0% |
| ! | TTATTCTTATTCGTTGTTAC+AGG | + | chr1.3:42257540-42257559 | MS.gene45440:intron | 25.0% |
| ! | TTTCAATATATAGACATACC+AGG | - | chr1.3:42256736-42256755 | None:intergenic | 25.0% |
| !! | AAACTGTTAATTTGGATTGA+AGG | + | chr1.3:42254881-42254900 | MS.gene45440:intron | 25.0% |
| !! | AATCTAATGAGATTGATGAT+TGG | + | chr1.3:42255934-42255953 | MS.gene45440:intron | 25.0% |
| !! | AATCTAGAAATTTTCAGTAG+TGG | + | chr1.3:42255477-42255496 | MS.gene45440:intron | 25.0% |
| !! | AATGTTTGTGTTTTGTATTC+AGG | - | chr1.3:42256959-42256978 | None:intergenic | 25.0% |
| !! | ATCAATAGTGTCTTATTCAT+GGG | - | chr1.3:42255699-42255718 | None:intergenic | 25.0% |
| !! | ATCTAGAAATTTTCAGTAGT+GGG | + | chr1.3:42255478-42255497 | MS.gene45440:intron | 25.0% |
| !! | GCTAAATGATGGAATAAATA+AGG | - | chr1.3:42259658-42259677 | None:intergenic | 25.0% |
| !! | GTATATATCCAAGATCATTT+TGG | + | chr1.3:42257823-42257842 | MS.gene45440:CDS | 25.0% |
| !! | GTTTTTATCTTTTCTCTACT+CGG | + | chr1.3:42258536-42258555 | MS.gene45440:CDS | 25.0% |
| !! | TATCAATAGTGTCTTATTCA+TGG | - | chr1.3:42255700-42255719 | None:intergenic | 25.0% |
| !! | TTTTGTGTAATTACATGTGT+CGG | + | chr1.3:42257037-42257056 | MS.gene45440:intron | 25.0% |
| !! | TTTTTCCAATCATGATATCA+AGG | + | chr1.3:42255881-42255900 | MS.gene45440:intron | 25.0% |
| !!! | ACTTTTCTTATTTCATCATG+AGG | - | chr1.3:42257504-42257523 | None:intergenic | 25.0% |
| !!! | CAATTGACTTTTGATCAATT+TGG | + | chr1.3:42255409-42255428 | MS.gene45440:intron | 25.0% |
| !!! | CACTTTGTTTTTGATTTTCT+TGG | - | chr1.3:42255793-42255812 | None:intergenic | 25.0% |
| !!! | CTATTATTTAGTTTGCAGTT+GGG | + | chr1.3:42258917-42258936 | MS.gene45440:CDS | 25.0% |
| !!! | TAATTTTGAGTTGGAAAAGT+AGG | - | chr1.3:42255332-42255351 | None:intergenic | 25.0% |
| !!! | TCTATTATTTAGTTTGCAGT+TGG | + | chr1.3:42258916-42258935 | MS.gene45440:CDS | 25.0% |
| !!! | TTCGTTTTGATCGTATATAA+AGG | - | chr1.3:42254971-42254990 | None:intergenic | 25.0% |
| !!! | TTGGTTTTAAATTACAGTTG+CGG | + | chr1.3:42256797-42256816 | MS.gene45440:intron | 25.0% |
| AAATACTCTTGGCTTATAAC+TGG | + | chr1.3:42258873-42258892 | MS.gene45440:CDS | 30.0% | |
| AACAAGGAAGTTCAATATTC+AGG | + | chr1.3:42253232-42253251 | MS.gene45440:CDS | 30.0% | |
| AAGGTAAACTAAGATTGCTA+TGG | - | chr1.3:42257145-42257164 | None:intergenic | 30.0% | |
| ACAAACTATATAGTGTGACA+TGG | + | chr1.3:42256906-42256925 | MS.gene45440:intron | 30.0% | |
| ACTATAAGATAGTACTCTCA+CGG | + | chr1.3:42254930-42254949 | MS.gene45440:intron | 30.0% | |
| AGCAACAATTATGACATGAA+TGG | - | chr1.3:42255282-42255301 | None:intergenic | 30.0% | |
| ATCAGTGCAAAGAAAAGAAT+GGG | + | chr1.3:42258504-42258523 | MS.gene45440:CDS | 30.0% | |
| CAAACTATATAGTGTGACAT+GGG | + | chr1.3:42256907-42256926 | MS.gene45440:intron | 30.0% | |
| CAGACAAAGAAAATTCAGAT+GGG | + | chr1.3:42259133-42259152 | MS.gene45440:intron | 30.0% | |
| GAAAATCAAAAACAAAGTGG+GGG | + | chr1.3:42255794-42255813 | MS.gene45440:intron | 30.0% | |
| GAATATAGCGAAAGAGATAA+AGG | + | chr1.3:42256031-42256050 | MS.gene45440:intron | 30.0% | |
| GATAACTTACCAATGATGAA+AGG | - | chr1.3:42253310-42253329 | None:intergenic | 30.0% | |
| TAAACTAAGATTGCTATGGT+GGG | - | chr1.3:42257141-42257160 | None:intergenic | 30.0% | |
| TAAATCAAAACGCTGAAAAG+TGG | + | chr1.3:42255019-42255038 | MS.gene45440:intron | 30.0% | |
| TAATGGAATAACTCTCACAA+TGG | - | chr1.3:42258274-42258293 | None:intergenic | 30.0% | |
| TCAATCAATACTTTGAACCT+TGG | + | chr1.3:42256778-42256797 | MS.gene45440:intron | 30.0% | |
| TCAGACAAAGAAAATTCAGA+TGG | + | chr1.3:42259132-42259151 | MS.gene45440:intron | 30.0% | |
| TCTTTGAGCGTTATCAATAT+AGG | + | chr1.3:42258402-42258421 | MS.gene45440:CDS | 30.0% | |
| TGAATTAAGTCATAGTGAGA+AGG | - | chr1.3:42256194-42256213 | None:intergenic | 30.0% | |
| TTATTCCATTATGGTCTAGT+GGG | + | chr1.3:42258283-42258302 | MS.gene45440:CDS | 30.0% | |
| TTATTTATTGTTGCCCAATC+CGG | + | chr1.3:42254746-42254765 | MS.gene45440:intron | 30.0% | |
| TTGTGAGAGTTATTCCATTA+TGG | + | chr1.3:42258274-42258293 | MS.gene45440:CDS | 30.0% | |
| TTGTTGTGATGGTAAAATTG+AGG | - | chr1.3:42258027-42258046 | None:intergenic | 30.0% | |
| TTTGTTGCAGATTCTTATCT+CGG | + | chr1.3:42256671-42256690 | MS.gene45440:CDS | 30.0% | |
| ! | AACTAATGAAATTTTCCGGT+TGG | + | chr1.3:42253505-42253524 | MS.gene45440:intron | 30.0% |
| ! | GAACAAAGCTTGTGTTATTA+AGG | + | chr1.3:42258164-42258183 | MS.gene45440:CDS | 30.0% |
| ! | GCAACTGTAATTTAAAACCA+AGG | - | chr1.3:42256798-42256817 | None:intergenic | 30.0% |
| ! | GGAACTAACTTTTATATCTC+AGG | + | chr1.3:42258136-42258155 | MS.gene45440:intron | 30.0% |
| ! | TATACGTGTTCTTTTATGTC+TGG | + | chr1.3:42253476-42253495 | MS.gene45440:intron | 30.0% |
| ! | TCAATAGTGTCTTATTCATG+GGG | - | chr1.3:42255698-42255717 | None:intergenic | 30.0% |
| ! | TCAATTTTACCATCACAACA+AGG | + | chr1.3:42258026-42258045 | MS.gene45440:CDS | 30.0% |
| ! | TGGAAGTTTTCTGTTGTTAT+AGG | - | chr1.3:42257986-42258005 | None:intergenic | 30.0% |
| ! | TTTTCCAACCAAAATGATCT+TGG | - | chr1.3:42257834-42257853 | None:intergenic | 30.0% |
| !! | AATTGAGGTGAATTTTTAGG+CGG | - | chr1.3:42258012-42258031 | None:intergenic | 30.0% |
| !! | ATATCCAAGATCATTTTGGT+TGG | + | chr1.3:42257827-42257846 | MS.gene45440:CDS | 30.0% |
| !! | GTCATTTTGACAAATACTCT+TGG | + | chr1.3:42258862-42258881 | MS.gene45440:CDS | 30.0% |
| !! | TCTTGGAAATGTTTTTCAAC+TGG | + | chr1.3:42257752-42257771 | MS.gene45440:CDS | 30.0% |
| !! | TTAAGTGGGCTTTGAAATTT+GGG | - | chr1.3:42253621-42253640 | None:intergenic | 30.0% |
| !! | TTTAAGTGGGCTTTGAAATT+TGG | - | chr1.3:42253622-42253641 | None:intergenic | 30.0% |
| !! | TTTGGTTGGAAAATTGGTTT+TGG | + | chr1.3:42257841-42257860 | MS.gene45440:CDS | 30.0% |
| !!! | ACTTTTCAGCGTTTTGATTT+AGG | - | chr1.3:42255020-42255039 | None:intergenic | 30.0% |
| !!! | GATCATTTTGGTTGGAAAAT+TGG | + | chr1.3:42257835-42257854 | MS.gene45440:CDS | 30.0% |
| AAATGACCCTAATCTAGCAT+GGG | - | chr1.3:42255199-42255218 | None:intergenic | 35.0% | |
| AACAGCAATGATCAAACCAA+CGG | + | chr1.3:42257582-42257601 | MS.gene45440:CDS | 35.0% | |
| AAGGAAGTTCAATATTCAGG+TGG | + | chr1.3:42253235-42253254 | MS.gene45440:CDS | 35.0% | |
| AAGTAGGTGTAATTTATCCC+TGG | - | chr1.3:42255316-42255335 | None:intergenic | 35.0% | |
| AATGAAAAGTCGCAACTTCA+AGG | + | chr1.3:42259333-42259352 | MS.gene45440:intron | 35.0% | |
| ACCAACAGTCCAACAATTAT+AGG | - | chr1.3:42255745-42255764 | None:intergenic | 35.0% | |
| ACCTACCTTAGTTTATCAGT+TGG | - | chr1.3:42258069-42258088 | None:intergenic | 35.0% | |
| ACCTTGTAAATAGGGATTGA+GGG | + | chr1.3:42257160-42257179 | MS.gene45440:intron | 35.0% | |
| ACGTCTTTAATACGAGATGA+CGG | + | chr1.3:42254784-42254803 | MS.gene45440:intron | 35.0% | |
| AGCAAGAAAGAATAACAGTG+TGG | - | chr1.3:42257893-42257912 | None:intergenic | 35.0% | |
| ATCACTATGCCTTTCATCAT+TGG | + | chr1.3:42253298-42253317 | MS.gene45440:CDS | 35.0% | |
| ATGCTAAAGGAATAAGAACG+CGG | - | chr1.3:42258458-42258477 | None:intergenic | 35.0% | |
| CAATATTTCAACCGCAATTG+CGG | + | chr1.3:42257439-42257458 | MS.gene45440:intron | 35.0% | |
| CCAACTCAAAATTAGCATGT+AGG | + | chr1.3:42255338-42255357 | MS.gene45440:intron | 35.0% | |
| CGTTGCGATTGTGATAATTA+TGG | + | chr1.3:42256821-42256840 | MS.gene45440:intron | 35.0% | |
| GAACAAGATATAGCATGTGA+TGG | + | chr1.3:42258192-42258211 | MS.gene45440:CDS | 35.0% | |
| GAGCGTTATCAATATAGGTA+CGG | + | chr1.3:42258407-42258426 | MS.gene45440:CDS | 35.0% | |
| GATCAGTGCAAAGAAAAGAA+TGG | + | chr1.3:42258503-42258522 | MS.gene45440:CDS | 35.0% | |
| GCAAAGAAAAGAATGGGAAT+TGG | + | chr1.3:42258510-42258529 | MS.gene45440:CDS | 35.0% | |
| GGATAAGCATCACACAATTT+CGG | - | chr1.3:42257308-42257327 | None:intergenic | 35.0% | |
| GGGCATATGATTTCAAATTG+TGG | - | chr1.3:42257472-42257491 | None:intergenic | 35.0% | |
| GTAAACTAAGATTGCTATGG+TGG | - | chr1.3:42257142-42257161 | None:intergenic | 35.0% | |
| GTAGAAAACACTACTTCAAG+AGG | + | chr1.3:42258801-42258820 | MS.gene45440:CDS | 35.0% | |
| GTTATTCCATTATGGTCTAG+TGG | + | chr1.3:42258282-42258301 | MS.gene45440:CDS | 35.0% | |
| TAAATGACCCTAATCTAGCA+TGG | - | chr1.3:42255200-42255219 | None:intergenic | 35.0% | |
| TACCTTGTAAATAGGGATTG+AGG | + | chr1.3:42257159-42257178 | MS.gene45440:intron | 35.0% | |
| TATAATTGTTGGACTGTTGG+TGG | + | chr1.3:42255744-42255763 | MS.gene45440:intron | 35.0% | |
| TATTGACGGTTAAAATTCGC+TGG | + | chr1.3:42255646-42255665 | MS.gene45440:intron | 35.0% | |
| TATTTATACACTCAACAGCC+CGG | + | chr1.3:42259425-42259444 | MS.gene45440:CDS | 35.0% | |
| TCAATATTCAGGTGGTGAAA+TGG | + | chr1.3:42253243-42253262 | MS.gene45440:CDS | 35.0% | |
| TCCAACTGATAAACTAAGGT+AGG | + | chr1.3:42258065-42258084 | MS.gene45440:intron | 35.0% | |
| TCTTGATCTTCTTGTTGCAA+TGG | - | chr1.3:42253190-42253209 | None:intergenic | 35.0% | |
| TGCAATTGACATGAGACTAA+AGG | - | chr1.3:42257656-42257675 | None:intergenic | 35.0% | |
| TGCAGTTGAAGAGTTAAGTA+AGG | + | chr1.3:42258950-42258969 | MS.gene45440:intron | 35.0% | |
| TGGTTCCAACTGATAAACTA+AGG | + | chr1.3:42258061-42258080 | MS.gene45440:CDS | 35.0% | |
| TTACTTAACTCTTCAACTGC+AGG | - | chr1.3:42258951-42258970 | None:intergenic | 35.0% | |
| TTATTCGTTGTTACAGGGAA+TGG | + | chr1.3:42257546-42257565 | MS.gene45440:intron | 35.0% | |
| TTCCAATCATGATATCAAGG+TGG | + | chr1.3:42255884-42255903 | MS.gene45440:intron | 35.0% | |
| TTTAGTCTCATGTCAATTGC+AGG | + | chr1.3:42257655-42257674 | MS.gene45440:CDS | 35.0% | |
| ! | AGTAAGGATTAATGGCTTTG+TGG | + | chr1.3:42258966-42258985 | MS.gene45440:intron | 35.0% |
| ! | ATTAGGGGGCTTTAATTTAG+TGG | - | chr1.3:42253661-42253680 | None:intergenic | 35.0% |
| ! | ATTTAAGATACTCGAACGCA+TGG | - | chr1.3:42259239-42259258 | None:intergenic | 35.0% |
| ! | CACCTAAAAGCTTTTTACCT+TGG | + | chr1.3:42256311-42256330 | MS.gene45440:intron | 35.0% |
| ! | CATAGAATATTTTGTCGGTC+TGG | - | chr1.3:42253370-42253389 | None:intergenic | 35.0% |
| ! | CCAAGACCCTATTGTTATTA+GGG | - | chr1.3:42257738-42257757 | None:intergenic | 35.0% |
| ! | CGTTTTTGTCACAAATGAGT+AGG | + | chr1.3:42259096-42259115 | MS.gene45440:intron | 35.0% |
| ! | CTCCAAGGTAAAAAGCTTTT+AGG | - | chr1.3:42256316-42256335 | None:intergenic | 35.0% |
| ! | CTTTAGCATCGAAGATAAGA+GGG | + | chr1.3:42258469-42258488 | MS.gene45440:CDS | 35.0% |
| ! | GATAAAAACATGAGTGCTGT+TGG | - | chr1.3:42257871-42257890 | None:intergenic | 35.0% |
| ! | GTTTTGTATTCAGGCTTCAT+AGG | - | chr1.3:42256950-42256969 | None:intergenic | 35.0% |
| ! | TCCAAGACCCTATTGTTATT+AGG | - | chr1.3:42257739-42257758 | None:intergenic | 35.0% |
| ! | TCTGAAGCAGTCAATTTCAT+AGG | + | chr1.3:42258663-42258682 | MS.gene45440:CDS | 35.0% |
| ! | TGATGAAAGGCATAGTGATA+AGG | - | chr1.3:42253297-42253316 | None:intergenic | 35.0% |
| ! | TTAGGGGGCTTTAATTTAGT+GGG | - | chr1.3:42253660-42253679 | None:intergenic | 35.0% |
| !! | CCTACATGCTAATTTTGAGT+TGG | - | chr1.3:42255341-42255360 | None:intergenic | 35.0% |
| !! | CGATTCTTAAGTGTTGGATT+AGG | + | chr1.3:42256695-42256714 | MS.gene45440:CDS | 35.0% |
| !! | GAGCTTGTTAAATCATGTAG+AGG | + | chr1.3:42253583-42253602 | MS.gene45440:intron | 35.0% |
| !!! | CAGCGATTTTTGAGACTATA+AGG | + | chr1.3:42258565-42258584 | MS.gene45440:CDS | 35.0% |
| !!! | GTGGACATTACTGTTTTTGA+AGG | + | chr1.3:42255903-42255922 | MS.gene45440:intron | 35.0% |
| AAAAAGATGCGAGCATGTGA+AGG | + | chr1.3:42256110-42256129 | MS.gene45440:intron | 40.0% | |
| AAAATGAGCCTCCAATGCTA+AGG | - | chr1.3:42258320-42258339 | None:intergenic | 40.0% | |
| AAATGAGCCTCCAATGCTAA+GGG | - | chr1.3:42258319-42258338 | None:intergenic | 40.0% | |
| AATGACCCTAATCTAGCATG+GGG | - | chr1.3:42255198-42255217 | None:intergenic | 40.0% | |
| ACTTCAAGAGGAGGAAAAGA+TGG | + | chr1.3:42258813-42258832 | MS.gene45440:CDS | 40.0% | |
| ATACCAGCTAGACAAAGTTG+AGG | - | chr1.3:42258642-42258661 | None:intergenic | 40.0% | |
| ATCACCAACATCATGGGAAA+TGG | + | chr1.3:42257615-42257634 | MS.gene45440:CDS | 40.0% | |
| ATCATGATGACCCTTAGCAT+TGG | + | chr1.3:42258306-42258325 | MS.gene45440:CDS | 40.0% | |
| ATCTACTGTGCATAGATTCC+AGG | - | chr1.3:42258232-42258251 | None:intergenic | 40.0% | |
| ATCTTATAGTGAGCGATGAG+AGG | - | chr1.3:42254920-42254939 | None:intergenic | 40.0% | |
| ATGATCCCACTAGACCATAA+TGG | - | chr1.3:42258291-42258310 | None:intergenic | 40.0% | |
| ATGGTTCAAGAATAAACCCC+TGG | + | chr1.3:42258211-42258230 | MS.gene45440:CDS | 40.0% | |
| ATTTATACACTCAACAGCCC+GGG | + | chr1.3:42259426-42259445 | MS.gene45440:CDS | 40.0% | |
| CCCTAATAACAATAGGGTCT+TGG | + | chr1.3:42257735-42257754 | MS.gene45440:CDS | 40.0% | |
| CCTCTTATCTTCGATGCTAA+AGG | - | chr1.3:42258471-42258490 | None:intergenic | 40.0% | |
| CCTTGTAAATAGGGATTGAG+GGG | + | chr1.3:42257161-42257180 | MS.gene45440:intron | 40.0% | |
| CGATCAATCACCAACATCAT+GGG | + | chr1.3:42257609-42257628 | MS.gene45440:CDS | 40.0% | |
| CTTCAAGAGGAGGAAAAGAT+GGG | + | chr1.3:42258814-42258833 | MS.gene45440:CDS | 40.0% | |
| CTTGTAAATAGGGATTGAGG+GGG | + | chr1.3:42257162-42257181 | MS.gene45440:intron | 40.0% | |
| GAAAACACTACTTCAAGAGG+AGG | + | chr1.3:42258804-42258823 | MS.gene45440:CDS | 40.0% | |
| GATTCTCTCACTCAAACTCA+GGG | - | chr1.3:42255853-42255872 | None:intergenic | 40.0% | |
| GCAACACTAGACATAGTACT+TGG | - | chr1.3:42258717-42258736 | None:intergenic | 40.0% | |
| GCCTATAATTGTTGGACTGT+TGG | + | chr1.3:42255741-42255760 | MS.gene45440:intron | 40.0% | |
| GTCCACCTTGATATCATGAT+TGG | - | chr1.3:42255889-42255908 | None:intergenic | 40.0% | |
| GTGATTGTTTGCAGCAAATG+AGG | + | chr1.3:42256505-42256524 | MS.gene45440:intron | 40.0% | |
| GTTGCTACTATTTCAGACCA+GGG | + | chr1.3:42255296-42255315 | MS.gene45440:intron | 40.0% | |
| GTTTCATGTTCCATGGCATT+TGG | + | chr1.3:42257685-42257704 | MS.gene45440:CDS | 40.0% | |
| TCACAAATGAGTAGGCTTGA+TGG | + | chr1.3:42259104-42259123 | MS.gene45440:intron | 40.0% | |
| TCATCCTTTGAGTCACCTTT+GGG | - | chr1.3:42259392-42259411 | None:intergenic | 40.0% | |
| TCATGGGGTTTCTCACTAAA+CGG | - | chr1.3:42255683-42255702 | None:intergenic | 40.0% | |
| TCTACTGTGCATAGATTCCA+GGG | - | chr1.3:42258231-42258250 | None:intergenic | 40.0% | |
| TCTCCAAGATGAAGCTTGAA+AGG | - | chr1.3:42256590-42256609 | None:intergenic | 40.0% | |
| TGGGAAGATTTGAACGAACA+TGG | + | chr1.3:42257282-42257301 | MS.gene45440:intron | 40.0% | |
| TGTTGCTACTATTTCAGACC+AGG | + | chr1.3:42255295-42255314 | MS.gene45440:intron | 40.0% | |
| TGTTTCTTCTACTCCGGATT+GGG | - | chr1.3:42254762-42254781 | None:intergenic | 40.0% | |
| TTCATCCTTTGAGTCACCTT+TGG | - | chr1.3:42259393-42259412 | None:intergenic | 40.0% | |
| ! | AAATGCGAACGATGGAGTTT+TGG | + | chr1.3:42258593-42258612 | MS.gene45440:CDS | 40.0% |
| ! | ATTGCCATTTCCCATGATGT+TGG | - | chr1.3:42257622-42257641 | None:intergenic | 40.0% |
| ! | CACATGCTCGCATCTTTTTA+AGG | - | chr1.3:42256109-42256128 | None:intergenic | 40.0% |
| ! | CCTTTAGCATCGAAGATAAG+AGG | + | chr1.3:42258468-42258487 | MS.gene45440:CDS | 40.0% |
| ! | GATTTGAGTCCTTGTTGTGA+TGG | - | chr1.3:42258038-42258057 | None:intergenic | 40.0% |
| ! | TAAGAAGCACATACACTCCT+CGG | - | chr1.3:42257110-42257129 | None:intergenic | 40.0% |
| ! | TCTTTAATACGAGATGACGG+AGG | + | chr1.3:42254787-42254806 | MS.gene45440:intron | 40.0% |
| ! | TTCCATCATTTAGCTCAAGC+AGG | + | chr1.3:42259664-42259683 | MS.gene45440:intron | 40.0% |
| ! | TTCTTTGCACTGATCGTAAC+TGG | - | chr1.3:42258498-42258517 | None:intergenic | 40.0% |
| ! | TTGTTTCTTCTACTCCGGAT+TGG | - | chr1.3:42254763-42254782 | None:intergenic | 40.0% |
| !! | ACGTCTTGTTTCTTCTACTC+CGG | - | chr1.3:42254768-42254787 | None:intergenic | 40.0% |
| !! | CTTTAATACGAGATGACGGA+GGG | + | chr1.3:42254788-42254807 | MS.gene45440:intron | 40.0% |
| !! | CTTTAATTTAGTGGGCTTGG+TGG | - | chr1.3:42253652-42253671 | None:intergenic | 40.0% |
| !! | GGTGAATTTTTAGGCGGTAA+TGG | - | chr1.3:42258006-42258025 | None:intergenic | 40.0% |
| !! | TTAGTTTGCAGTTGGGCTTA+TGG | + | chr1.3:42258924-42258943 | MS.gene45440:CDS | 40.0% |
| !! | TTTTGGAAATGTCGGCATTG+TGG | + | chr1.3:42258610-42258629 | MS.gene45440:CDS | 40.0% |
| !!! | CGATGGAGTTTTGGAAATGT+CGG | + | chr1.3:42258602-42258621 | MS.gene45440:CDS | 40.0% |
| !!! | TGGTGGAGGCTTTTTTAAGT+GGG | - | chr1.3:42253635-42253654 | None:intergenic | 40.0% |
| !!! | TTGGTGGAGGCTTTTTTAAG+TGG | - | chr1.3:42253636-42253655 | None:intergenic | 40.0% |
| AACCACACTGTAACTGCATC+AGG | - | chr1.3:42257329-42257348 | None:intergenic | 45.0% | |
| AGAGGCTAGCAGTTACAATG+TGG | + | chr1.3:42257361-42257380 | MS.gene45440:intron | 45.0% | |
| AGGAGAAGAAATGCGAACGA+TGG | + | chr1.3:42258585-42258604 | MS.gene45440:CDS | 45.0% | |
| ATCCTGATGCAGTTACAGTG+TGG | + | chr1.3:42257324-42257343 | MS.gene45440:intron | 45.0% | |
| ATGGGGTGGTGACAATTAAG+AGG | - | chr1.3:42255181-42255200 | None:intergenic | 45.0% | |
| CAACAAGGACTCAAATCTCG+TGG | + | chr1.3:42258041-42258060 | MS.gene45440:CDS | 45.0% | |
| CACCTGCTTGAGCTAAATGA+TGG | - | chr1.3:42259669-42259688 | None:intergenic | 45.0% | |
| CACTCTCTCTCAAGCATTCA+AGG | - | chr1.3:42253558-42253577 | None:intergenic | 45.0% | |
| CATCCTTTGAGTCACCTTTG+GGG | - | chr1.3:42259391-42259410 | None:intergenic | 45.0% | |
| CCCCTCAATCCCTATTTACA+AGG | - | chr1.3:42257164-42257183 | None:intergenic | 45.0% | |
| CGATTCTCTCACTCAAACTC+AGG | - | chr1.3:42255854-42255873 | None:intergenic | 45.0% | |
| CGCAAAACTAGCGAACAAGT+TGG | - | chr1.3:42257947-42257966 | None:intergenic | 45.0% | |
| CTACTGTGCATAGATTCCAG+GGG | - | chr1.3:42258230-42258249 | None:intergenic | 45.0% | |
| CTTGGCAATACTGCAAGCTT+AGG | + | chr1.3:42256530-42256549 | MS.gene45440:CDS | 45.0% | |
| GAAAAGTCGCAACTTCAAGG+AGG | + | chr1.3:42259336-42259355 | MS.gene45440:intron | 45.0% | |
| GACTTGAATCTCATCCCCAA+AGG | + | chr1.3:42259374-42259393 | MS.gene45440:intron | 45.0% | |
| GCAATGATCAAACCAACGGA+AGG | + | chr1.3:42257586-42257605 | MS.gene45440:CDS | 45.0% | |
| GCGATCAATCACCAACATCA+TGG | + | chr1.3:42257608-42257627 | MS.gene45440:CDS | 45.0% | |
| GGACAAGGAATTGCACACAA+AGG | + | chr1.3:42259718-42259737 | MS.gene45440:CDS | 45.0% | |
| GGACCTTTCAAGCTTCATCT+TGG | + | chr1.3:42256584-42256603 | MS.gene45440:CDS | 45.0% | |
| GGAGAACCACTGAATAGGAA+GGG | + | chr1.3:42255765-42255784 | MS.gene45440:intron | 45.0% | |
| GGAGGTGATATGTCTGTTCA+AGG | - | chr1.3:42258361-42258380 | None:intergenic | 45.0% | |
| GTGCTTGCTTGTGTAGAGAA+GGG | + | chr1.3:42254827-42254846 | MS.gene45440:intron | 45.0% | |
| GTGGTTATACACGTACGTAG+AGG | + | chr1.3:42257343-42257362 | MS.gene45440:intron | 45.0% | |
| GTGTGCAATTCCTTGTCCAA+CGG | - | chr1.3:42259716-42259735 | None:intergenic | 45.0% | |
| GTTAACTGCATTGCAACTGC+TGG | + | chr1.3:42256849-42256868 | MS.gene45440:intron | 45.0% | |
| TACAGGGAATGGCATTGTTG+TGG | + | chr1.3:42257557-42257576 | MS.gene45440:intron | 45.0% | |
| TCATCATGAGGTTCAGCTCA+GGG | - | chr1.3:42257492-42257511 | None:intergenic | 45.0% | |
| TCTCAACCACAAAGACGCAA+GGG | + | chr1.3:42253268-42253287 | MS.gene45440:CDS | 45.0% | |
| TGCTGGTGTTTCATGTTCCA+TGG | + | chr1.3:42257678-42257697 | MS.gene45440:CDS | 45.0% | |
| TGCTTGCTTGTGTAGAGAAG+GGG | + | chr1.3:42254828-42254847 | MS.gene45440:intron | 45.0% | |
| TGGAGAACCACTGAATAGGA+AGG | + | chr1.3:42255764-42255783 | MS.gene45440:intron | 45.0% | |
| TTCATCATGAGGTTCAGCTC+AGG | - | chr1.3:42257493-42257512 | None:intergenic | 45.0% | |
| TTCTCAACCACAAAGACGCA+AGG | + | chr1.3:42253267-42253286 | MS.gene45440:CDS | 45.0% | |
| TTGGTACCCTTCCTATTCAG+TGG | - | chr1.3:42255774-42255793 | None:intergenic | 45.0% | |
| TTGGTGGAGAACCACTGAAT+AGG | + | chr1.3:42255760-42255779 | MS.gene45440:intron | 45.0% | |
| ! | AAGAAGCACATACACTCCTC+GGG | - | chr1.3:42257109-42257128 | None:intergenic | 45.0% |
| ! | ATGATGACCCTTAGCATTGG+AGG | + | chr1.3:42258309-42258328 | MS.gene45440:CDS | 45.0% |
| ! | CAAGTGTCGTACACATGGAA+TGG | + | chr1.3:42259765-42259784 | MS.gene45440:CDS | 45.0% |
| ! | CTCGGTCGATTCTTAAGTGT+TGG | + | chr1.3:42256689-42256708 | MS.gene45440:CDS | 45.0% |
| ! | TTCGCTTTCTGGATTGGGAA+TGG | + | chr1.3:42258740-42258759 | MS.gene45440:CDS | 45.0% |
| ! | TTTGCAGCAAATGAGGCACT+TGG | + | chr1.3:42256512-42256531 | MS.gene45440:intron | 45.0% |
| !! | CTCCAACTTTGAAGTTCCAG+CGG | + | chr1.3:42258377-42258396 | MS.gene45440:CDS | 45.0% |
| !! | GGGCTTTAATTTAGTGGGCT+TGG | - | chr1.3:42253655-42253674 | None:intergenic | 45.0% |
| !! | TAATTTAGTGGGCTTGGTGG+AGG | - | chr1.3:42253649-42253668 | None:intergenic | 45.0% |
| !! | TCCAACTTTGAAGTTCCAGC+GGG | + | chr1.3:42258378-42258397 | MS.gene45440:CDS | 45.0% |
| !!! | ATTTTTTTTTTAATTTTTTC+TGG | + | chr1.3:42255976-42255995 | MS.gene45440:intron | 5.0% |
| AACCACAGGCATGAACTTGC+TGG | - | chr1.3:42256645-42256664 | None:intergenic | 50.0% | |
| AGCAAGTTCATGCCTGTGGT+TGG | + | chr1.3:42256644-42256663 | MS.gene45440:CDS | 50.0% | |
| AGGTTCTGCTGTCAGTTTCC+TGG | + | chr1.3:42256715-42256734 | MS.gene45440:CDS | 50.0% | |
| ATAACGCTCAAAGATCCCGC+TGG | - | chr1.3:42258396-42258415 | None:intergenic | 50.0% | |
| CAAGAGGAGGAAAAGATGGG+TGG | + | chr1.3:42258817-42258836 | MS.gene45440:CDS | 50.0% | |
| CACCACCCCATGCTAGATTA+GGG | + | chr1.3:42255190-42255209 | MS.gene45440:intron | 50.0% | |
| CATCCCCAAAGGTGACTCAA+AGG | + | chr1.3:42259385-42259404 | MS.gene45440:CDS | 50.0% | |
| CGCTGGAACTTCAAAGTTGG+AGG | - | chr1.3:42258379-42258398 | None:intergenic | 50.0% | |
| CGTTGTCGTGCATAGAGAAG+AGG | + | chr1.3:42259572-42259591 | MS.gene45440:intron | 50.0% | |
| CTCATGTCAATTGCAGGTGC+TGG | + | chr1.3:42257661-42257680 | MS.gene45440:CDS | 50.0% | |
| CTCTCACTCAAACTCAGGGA+CGG | - | chr1.3:42255849-42255868 | None:intergenic | 50.0% | |
| GCACCTCAACTTTGTCTAGC+TGG | + | chr1.3:42258636-42258655 | MS.gene45440:CDS | 50.0% | |
| GCTGCTTCGCTTTCTGGATT+GGG | + | chr1.3:42258735-42258754 | MS.gene45440:CDS | 50.0% | |
| GGTGCTTGCTTGTGTAGAGA+AGG | + | chr1.3:42254826-42254845 | MS.gene45440:intron | 50.0% | |
| TCACCACCCCATGCTAGATT+AGG | + | chr1.3:42255189-42255208 | MS.gene45440:intron | 50.0% | |
| TCCCGCTGGAACTTCAAAGT+TGG | - | chr1.3:42258382-42258401 | None:intergenic | 50.0% | |
| TCCTACATCGCTCAGATTCC+CGG | - | chr1.3:42259447-42259466 | None:intergenic | 50.0% | |
| TTGGTCTGCACCAAATGCCA+TGG | - | chr1.3:42257698-42257717 | None:intergenic | 50.0% | |
| ! | AGTGTTGCTGCTTCGCTTTC+TGG | + | chr1.3:42258729-42258748 | MS.gene45440:CDS | 50.0% |
| ! | TGATGCGCTAGCCTCTATGA+TGG | - | chr1.3:42257418-42257437 | None:intergenic | 50.0% |
| ! | TGCTGCTTCGCTTTCTGGAT+TGG | + | chr1.3:42258734-42258753 | MS.gene45440:CDS | 50.0% |
| !! | GCAACAAAAGCACCAACCAC+AGG | - | chr1.3:42256659-42256678 | None:intergenic | 50.0% |
| ACTCAGGGACGGATGCACTT+TGG | - | chr1.3:42255838-42255857 | None:intergenic | 55.0% | |
| AGCCAGCAAGTTCATGCCTG+TGG | + | chr1.3:42256640-42256659 | MS.gene45440:CDS | 55.0% | |
| AGGGTTGCGTCGTTAGAGAC+TGG | + | chr1.3:42259535-42259554 | MS.gene45440:intron | 55.0% | |
| ATGGCATCACACCGCAACTG+CGG | - | chr1.3:42257399-42257418 | None:intergenic | 55.0% | |
| CAACCACAAAGACGCAAGGG+TGG | + | chr1.3:42253271-42253290 | MS.gene45440:CDS | 55.0% | |
| CCTACATCGCTCAGATTCCC+GGG | - | chr1.3:42259446-42259465 | None:intergenic | 55.0% | |
| CGAAGTTCACACCGCAGTTG+CGG | + | chr1.3:42257385-42257404 | MS.gene45440:intron | 55.0% | |
| CGCAACTGCGGTGTGAACTT+CGG | - | chr1.3:42257387-42257406 | None:intergenic | 55.0% | |
| GACCCTAATCTAGCATGGGG+TGG | - | chr1.3:42255195-42255214 | None:intergenic | 55.0% | |
| GCACATACACTCCTCGGGTT+AGG | - | chr1.3:42257104-42257123 | None:intergenic | 55.0% | |
| GCGGTGTGATGCCATCATAG+AGG | + | chr1.3:42257404-42257423 | MS.gene45440:intron | 55.0% | |
| GGAGGGAGTTGGAGACATGA+AGG | + | chr1.3:42254805-42254824 | MS.gene45440:intron | 55.0% | |
| GGGTTGCGTCGTTAGAGACT+GGG | + | chr1.3:42259536-42259555 | MS.gene45440:intron | 55.0% | |
| GGTGATTGATCGCCTTCCGT+TGG | - | chr1.3:42257601-42257620 | None:intergenic | 55.0% | |
| GTCAGACACGTGTCCAACAC+CGG | + | chr1.3:42257072-42257091 | MS.gene45440:intron | 55.0% | |
| TCAGACACGTGTCCAACACC+GGG | + | chr1.3:42257073-42257092 | MS.gene45440:intron | 55.0% | |
| ! | TCGCGCAAGTGTCGTACACA+TGG | + | chr1.3:42259760-42259779 | MS.gene45440:CDS | 55.0% |
| ! | TCTGGATTGGGAATGGCTGC+AGG | + | chr1.3:42258747-42258766 | MS.gene45440:CDS | 55.0% |
| ! | TGCTGGCTGCAGCAGATAAG+AGG | - | chr1.3:42256628-42256647 | None:intergenic | 55.0% |
| !! | TACGAGATGACGGAGGGAGT+TGG | + | chr1.3:42254794-42254813 | MS.gene45440:intron | 55.0% |
| AACGGCTAGACCCCTTCTCG+AGG | - | chr1.3:42259698-42259717 | None:intergenic | 60.0% | |
| ACGGCTAGACCCCTTCTCGA+GGG | - | chr1.3:42259697-42259716 | None:intergenic | 60.0% | |
| AGGCCACCCTTGCGTCTTTG+TGG | - | chr1.3:42253277-42253296 | None:intergenic | 60.0% | |
| AGGGGTCTAGCCGTTGGACA+AGG | + | chr1.3:42259703-42259722 | MS.gene45440:CDS | 60.0% | |
| CCCGGGAATCTGAGCGATGT+AGG | + | chr1.3:42259443-42259462 | MS.gene45440:CDS | 60.0% | |
| GCAACTGCTGGCAACTGCTG+TGG | + | chr1.3:42256861-42256880 | MS.gene45440:intron | 60.0% | |
| GGGAATGGCTGCAGGAAGCT+TGG | + | chr1.3:42258755-42258774 | MS.gene45440:CDS | 60.0% | |
| TCGAGAAGGGGTCTAGCCGT+TGG | + | chr1.3:42259697-42259716 | MS.gene45440:CDS | 60.0% | |
| AGGTGAGCCGCCCTCGAGAA+GGG | + | chr1.3:42259684-42259703 | MS.gene45440:CDS | 65.0% | |
| GCTAGACCCCTTCTCGAGGG+CGG | - | chr1.3:42259694-42259713 | None:intergenic | 65.0% | |
| GGTTAGGCGTGTCCCGGTGT+TGG | - | chr1.3:42257088-42257107 | None:intergenic | 65.0% | |
| ! | TCCTCGGGTTAGGCGTGTCC+CGG | - | chr1.3:42257094-42257113 | None:intergenic | 65.0% |
| ACCGGGACACGCCTAACCCG+AGG | + | chr1.3:42257090-42257109 | MS.gene45440:intron | 70.0% | |
| CAGGTGAGCCGCCCTCGAGA+AGG | + | chr1.3:42259683-42259702 | MS.gene45440:CDS | 70.0% | |
| GGTGAGCCGCCCTCGAGAAG+GGG | + | chr1.3:42259685-42259704 | MS.gene45440:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 42253166 | 42259795 | 42253166 | ID=MS.gene45440 |
| chr1.3 | mRNA | 42253166 | 42259795 | 42253166 | ID=MS.gene45440.t1;Parent=MS.gene45440 |
| chr1.3 | exon | 42253166 | 42253319 | 42253166 | ID=MS.gene45440.t1.exon1;Parent=MS.gene45440.t1 |
| chr1.3 | CDS | 42253166 | 42253319 | 42253166 | ID=cds.MS.gene45440.t1;Parent=MS.gene45440.t1 |
| chr1.3 | exon | 42256519 | 42256736 | 42256519 | ID=MS.gene45440.t1.exon2;Parent=MS.gene45440.t1 |
| chr1.3 | CDS | 42256519 | 42256736 | 42256519 | ID=cds.MS.gene45440.t1;Parent=MS.gene45440.t1 |
| chr1.3 | exon | 42257562 | 42258082 | 42257562 | ID=MS.gene45440.t1.exon3;Parent=MS.gene45440.t1 |
| chr1.3 | CDS | 42257562 | 42258082 | 42257562 | ID=cds.MS.gene45440.t1;Parent=MS.gene45440.t1 |
| chr1.3 | exon | 42258158 | 42258966 | 42258158 | ID=MS.gene45440.t1.exon4;Parent=MS.gene45440.t1 |
| chr1.3 | CDS | 42258158 | 42258966 | 42258158 | ID=cds.MS.gene45440.t1;Parent=MS.gene45440.t1 |
| chr1.3 | exon | 42259375 | 42259497 | 42259375 | ID=MS.gene45440.t1.exon5;Parent=MS.gene45440.t1 |
| chr1.3 | CDS | 42259375 | 42259497 | 42259375 | ID=cds.MS.gene45440.t1;Parent=MS.gene45440.t1 |
| chr1.3 | exon | 42259677 | 42259795 | 42259677 | ID=MS.gene45440.t1.exon6;Parent=MS.gene45440.t1 |
| chr1.3 | CDS | 42259677 | 42259795 | 42259677 | ID=cds.MS.gene45440.t1;Parent=MS.gene45440.t1 |
| Gene Sequence |
| Protein sequence |