AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene015321

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015321.t1 MTR_5g014150 98.678 605 8 0 1 605 1 605 0.0 1237
MS.gene015321.t1 MTR_4g098800 80.000 605 108 3 1 605 1 592 0.0 1002
MS.gene015321.t1 MTR_4g098800 79.112 608 117 3 1 605 57 657 0.0 997
MS.gene015321.t1 MTR_7g010820 68.089 586 173 5 23 597 5 587 0.0 803
MS.gene015321.t1 MTR_1g116930 59.310 580 221 8 20 599 4 568 0.0 685
MS.gene015321.t1 MTR_7g005930 60.579 553 208 5 36 588 27 569 0.0 680
MS.gene015321.t1 MTR_7g013270 59.720 571 213 7 36 599 82 642 0.0 660
MS.gene015321.t1 MTR_3g462710 44.425 565 305 5 23 585 3 560 4.53e-169 493
MS.gene015321.t1 MTR_4g024930 46.101 577 282 8 14 588 6 555 3.38e-165 483
MS.gene015321.t1 MTR_7g067010 43.009 565 313 5 23 586 3 559 2.04e-163 479
MS.gene015321.t1 MTR_4g015080 42.179 569 318 6 28 594 18 577 3.37e-159 468
MS.gene015321.t1 MTR_7g098200 38.664 569 335 6 21 585 6 564 3.62e-143 428
MS.gene015321.t1 MTR_7g098160 36.979 576 345 6 16 585 5 568 3.69e-141 423
MS.gene015321.t1 MTR_7g098040 38.153 574 341 5 16 585 6 569 6.50e-139 418
MS.gene015321.t1 MTR_1g075440 36.637 565 344 5 25 585 9 563 7.95e-139 417
MS.gene015321.t1 MTR_3g112460 37.801 582 333 9 23 599 2 559 1.06e-138 416
MS.gene015321.t1 MTR_7g098200 38.313 569 327 7 21 585 6 554 1.89e-138 416
MS.gene015321.t1 MTR_7g098090 36.442 579 345 7 16 583 5 571 5.37e-134 405
MS.gene015321.t1 MTR_1g042310 35.929 565 352 4 23 585 5 561 6.69e-134 404
MS.gene015321.t1 MTR_3g112470 37.113 582 337 9 23 599 2 559 7.32e-133 400
MS.gene015321.t1 MTR_7g098180 37.390 567 338 7 25 585 12 567 2.69e-131 397
MS.gene015321.t1 MTR_3g462710 43.956 455 246 5 133 585 4 451 2.89e-131 392
MS.gene015321.t1 MTR_3g069500 36.598 582 346 9 11 589 2 563 7.70e-131 395
MS.gene015321.t1 MTR_3g112450 37.522 565 330 7 27 586 6 552 2.13e-130 394
MS.gene015321.t1 MTR_5g012270 37.797 590 351 10 16 597 2 583 2.88e-130 394
MS.gene015321.t1 MTR_1g041815 35.763 590 360 6 26 605 9 589 4.38e-129 392
MS.gene015321.t1 MTR_7g098220 38.328 574 340 5 16 585 2 565 7.41e-128 389
MS.gene015321.t1 MTR_5g012290 37.197 578 352 6 28 599 11 583 4.40e-127 386
MS.gene015321.t1 MTR_1g041835 36.299 562 347 4 26 585 9 561 7.68e-127 385
MS.gene015321.t1 MTR_1g041875 35.169 563 350 4 26 587 11 559 6.47e-126 383
MS.gene015321.t1 MTR_7g098230 35.150 532 331 5 58 585 40 561 3.51e-124 379
MS.gene015321.t1 MTR_4g114340 39.362 564 323 8 28 586 8 557 1.33e-122 374
MS.gene015321.t1 MTR_1g042310 36.000 525 326 4 63 585 1 517 1.33e-122 374
MS.gene015321.t1 MTR_7g065080 35.140 572 350 9 21 589 8 561 1.50e-122 374
MS.gene015321.t1 MTR_3g069440 35.929 565 345 9 30 589 19 571 1.78e-122 374
MS.gene015321.t1 MTR_1g042310 36.000 525 326 4 63 585 8 524 1.79e-122 373
MS.gene015321.t1 MTR_4g019580 34.583 587 366 10 6 589 1 572 9.24e-122 373
MS.gene015321.t1 MTR_5g055000 36.491 570 350 8 42 605 16 579 2.58e-121 371
MS.gene015321.t1 MTR_4g101380 36.581 585 359 10 23 599 6 586 1.89e-120 369
MS.gene015321.t1 MTR_3g069420 34.021 582 367 9 13 589 3 572 2.10e-119 367
MS.gene015321.t1 MTR_7g098220 38.899 527 308 5 63 585 5 521 2.18e-116 357
MS.gene015321.t1 MTR_3g072300 34.542 579 358 10 25 596 5 569 2.97e-116 358
MS.gene015321.t1 MTR_1g041885 36.149 509 310 4 63 570 1 495 3.59e-116 356
MS.gene015321.t1 MTR_4g107580 33.793 580 365 6 15 586 3 571 7.54e-116 358
MS.gene015321.t1 MTR_3g005010 37.500 576 311 11 19 585 5 540 9.90e-115 353
MS.gene015321.t1 MTR_4g033325 34.957 575 338 9 16 585 3 546 5.91e-111 343
MS.gene015321.t1 MTR_0294s0020 35.652 575 334 9 16 585 3 546 8.98e-111 343
MS.gene015321.t1 MTR_4g107530 32.508 606 387 10 12 602 4 602 1.70e-110 344
MS.gene015321.t1 MTR_4g107510 32.765 586 378 9 11 586 3 582 1.71e-110 343
MS.gene015321.t1 MTR_5g038060 34.342 562 354 9 42 593 29 585 6.22e-109 340
MS.gene015321.t1 MTR_7g098150 37.143 455 273 4 16 467 5 449 6.66e-109 336
MS.gene015321.t1 MTR_5g085850 35.971 556 332 6 30 582 16 550 4.17e-108 337
MS.gene015321.t1 MTR_7g088825 32.470 579 381 8 25 599 3 575 2.11e-107 336
MS.gene015321.t1 MTR_7g088790 33.276 577 373 8 29 598 14 585 5.37e-107 335
MS.gene015321.t1 MTR_7g098200 38.074 457 269 6 133 585 4 450 8.88e-107 330
MS.gene015321.t1 MTR_4g033330 35.409 562 326 11 16 570 2 533 3.20e-106 330
MS.gene015321.t1 MTR_3g014790 33.737 578 341 12 30 593 5 554 1.28e-105 330
MS.gene015321.t1 MTR_8g469470 31.295 556 373 4 38 586 26 579 6.97e-105 329
MS.gene015321.t1 MTR_4g033315 34.375 576 342 9 16 585 3 548 2.08e-103 324
MS.gene015321.t1 MTR_4g033310 34.375 576 342 9 16 585 3 548 2.08e-103 324
MS.gene015321.t1 MTR_7g006540 33.813 556 349 8 43 586 62 610 7.81e-103 325
MS.gene015321.t1 MTR_4g033375 36.220 508 291 9 29 531 17 496 9.00e-103 321
MS.gene015321.t1 MTR_2g005130 33.922 566 347 8 23 585 19 560 1.47e-102 323
MS.gene015321.t1 MTR_7g065080 35.102 490 297 9 103 589 3 474 3.53e-102 319
MS.gene015321.t1 MTR_2g017750 31.864 590 389 8 16 593 5 593 1.15e-101 321
MS.gene015321.t1 MTR_7g088820 30.862 580 392 7 24 599 5 579 4.74e-101 319
MS.gene015321.t1 MTR_4g033395 34.791 526 302 11 16 531 2 496 1.87e-100 315
MS.gene015321.t1 MTR_1g085090 32.264 592 358 11 30 599 3 573 2.73e-100 317
MS.gene015321.t1 MTR_8g038880 32.628 567 348 9 43 599 19 561 3.38e-100 316
MS.gene015321.t1 MTR_8g469480 33.516 546 351 9 48 586 42 582 1.34e-99 315
MS.gene015321.t1 MTR_7g088820 32.108 517 342 7 87 599 6 517 1.17e-96 306
MS.gene015321.t1 MTR_8g087780 32.991 585 379 8 25 598 2 584 1.29e-95 305
MS.gene015321.t1 MTR_8g469310 32.635 573 353 7 31 586 13 569 1.46e-95 304
MS.gene015321.t1 MTR_5g038190 30.265 565 380 7 29 586 9 566 1.98e-95 304
MS.gene015321.t1 MTR_7g111260 31.463 588 366 10 21 604 4 558 7.23e-95 303
MS.gene015321.t1 MTR_4g123537 33.565 575 355 10 15 586 18 568 1.14e-94 303
MS.gene015321.t1 MTR_5g038380 31.218 583 370 9 21 586 4 572 2.76e-93 298
MS.gene015321.t1 MTR_3g100980 29.840 563 373 7 38 594 10 556 4.81e-92 295
MS.gene015321.t1 MTR_4g107670 30.035 576 368 10 30 586 10 569 5.18e-91 292
MS.gene015321.t1 MTR_4g107610 30.756 569 380 8 16 578 2 562 3.35e-90 291
MS.gene015321.t1 MTR_8g087810 33.106 586 378 9 25 598 2 585 1.30e-88 286
MS.gene015321.t1 MTR_7g064780 28.814 590 405 8 15 599 2 581 1.39e-88 286
MS.gene015321.t1 MTR_7g088820 32.068 474 313 7 130 599 1 469 7.54e-87 279
MS.gene015321.t1 MTR_1g026740 30.855 538 355 9 54 585 27 553 4.22e-86 279
MS.gene015321.t1 MTR_8g103233 29.837 553 375 7 41 589 14 557 7.20e-86 279
MS.gene015321.t1 MTR_3g100980 28.426 591 373 8 38 594 10 584 1.04e-85 279
MS.gene015321.t1 MTR_4g033325 35.831 427 249 7 164 585 16 422 3.74e-85 273
MS.gene015321.t1 MTR_4g033325 35.831 427 249 7 164 585 42 448 5.82e-85 273
MS.gene015321.t1 MTR_4g033385 34.732 429 254 7 164 585 40 449 3.02e-82 266
MS.gene015321.t1 MTR_1g026750 30.442 565 376 8 41 599 15 568 8.38e-82 268
MS.gene015321.t1 MTR_2g101640 28.623 552 380 9 54 598 33 577 5.97e-80 265
MS.gene015321.t1 MTR_1g026770 29.015 548 378 7 54 599 25 563 1.60e-79 262
MS.gene015321.t1 MTR_1g057460 29.231 585 382 13 6 585 7 564 2.95e-79 261
MS.gene015321.t1 MTR_1g009200 28.715 599 398 14 16 601 2 584 1.62e-77 257
MS.gene015321.t1 MTR_4g011280 28.188 596 408 12 10 599 2 583 1.87e-77 257
MS.gene015321.t1 MTR_1g057460 31.557 488 303 12 103 585 32 493 2.09e-76 252
MS.gene015321.t1 MTR_7g064800 28.214 599 410 10 16 604 3 591 3.54e-76 254
MS.gene015321.t1 MTR_2g101610 27.978 554 386 8 54 602 37 582 2.06e-74 250
MS.gene015321.t1 MTR_2g101590 27.798 554 387 8 54 602 36 581 8.69e-73 246
MS.gene015321.t1 MTR_2g101650 26.773 564 398 9 42 599 22 576 2.52e-72 243
MS.gene015321.t1 MTR_0236s0050 30.801 487 308 12 103 585 32 493 5.29e-72 240
MS.gene015321.t1 MTR_2g093160 30.212 566 366 11 29 586 1 545 4.19e-71 239
MS.gene015321.t1 MTR_6g008690 29.130 563 343 11 44 585 6 533 1.42e-70 237
MS.gene015321.t1 MTR_2g093180 30.159 567 366 10 29 586 1 546 8.52e-69 233
MS.gene015321.t1 MTR_7g098210 30.303 528 274 11 63 585 1 439 1.29e-68 229
MS.gene015321.t1 MTR_2g093640 29.145 573 363 11 29 586 1 545 1.43e-67 229
MS.gene015321.t1 MTR_2g101560 29.084 557 377 8 54 602 37 583 1.28e-65 226
MS.gene015321.t1 MTR_7g052600 30.565 566 350 10 21 585 2 525 2.39e-65 223
MS.gene015321.t1 MTR_7g051830 30.212 566 352 10 21 585 2 525 5.39e-64 219
MS.gene015321.t1 MTR_7g051880 28.975 566 359 11 21 585 2 525 3.83e-59 206
MS.gene015321.t1 MTR_4g033310 35.379 277 166 4 312 585 218 484 1.28e-51 185
MS.gene015321.t1 MTR_4g033310 35.354 198 117 2 16 213 3 189 2.37e-30 125
MS.gene015321.t1 MTR_1g009170 24.627 402 245 11 171 567 9 357 1.25e-33 132
MS.gene015321.t1 MTR_3g065350 35.976 164 99 2 357 520 1 158 4.16e-27 108
MS.gene015321.t1 MTR_4g033390 38.554 83 51 0 503 585 30 112 1.43e-12 65.5
MS.gene015321.t1 MTR_8g091265 32.710 107 70 2 316 420 3 109 2.01e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene015321.t1 AT1G32450 73.710 601 148 3 1 598 1 594 0.0 924
MS.gene015321.t1 AT4G21680 68.366 569 173 4 25 589 9 574 0.0 793
MS.gene015321.t1 AT5G19640 56.610 590 235 5 16 604 31 600 0.0 670
MS.gene015321.t1 AT3G54140 43.717 565 311 5 23 586 3 561 2.11e-172 502
MS.gene015321.t1 AT3G54140 43.717 565 311 5 23 586 3 561 2.11e-172 502
MS.gene015321.t1 AT2G02040 43.548 558 309 4 30 586 27 579 1.04e-168 493
MS.gene015321.t1 AT1G62200 42.123 584 325 7 6 586 13 586 2.58e-164 482
MS.gene015321.t1 AT1G62200 40.131 613 325 8 6 586 13 615 1.08e-157 466
MS.gene015321.t1 AT1G62200 40.131 613 325 8 6 586 27 629 1.69e-157 466
MS.gene015321.t1 AT5G01180 39.929 566 332 5 21 585 2 560 5.87e-157 462
MS.gene015321.t1 AT5G01180 39.929 566 332 5 21 585 2 560 5.87e-157 462
MS.gene015321.t1 AT5G01180 39.929 566 332 5 21 585 2 560 5.87e-157 462
MS.gene015321.t1 AT2G02020 38.869 566 299 7 16 579 14 534 4.03e-139 416
MS.gene015321.t1 AT2G26690 36.897 580 351 7 28 605 8 574 1.43e-125 382
MS.gene015321.t1 AT5G46050 35.501 569 352 7 21 585 4 561 5.83e-125 380
MS.gene015321.t1 AT5G46040 35.026 571 354 9 21 586 4 562 1.02e-122 375
MS.gene015321.t1 AT3G54450 35.915 568 331 10 42 599 11 555 7.91e-121 369
MS.gene015321.t1 AT1G12110 37.119 590 351 10 21 600 5 584 4.86e-120 368
MS.gene015321.t1 AT3G53960 34.256 578 366 9 16 589 9 576 2.13e-117 362
MS.gene015321.t1 AT2G02020 35.866 566 295 9 16 579 14 513 5.81e-117 358
MS.gene015321.t1 AT2G37900 33.333 573 364 7 19 589 13 569 5.86e-117 360
MS.gene015321.t1 AT2G26690 36.727 550 333 7 58 605 5 541 3.19e-116 357
MS.gene015321.t1 AT2G26690 37.153 541 325 7 67 605 2 529 4.44e-116 356
MS.gene015321.t1 AT2G40460 35.626 567 340 10 28 587 8 556 1.04e-112 349
MS.gene015321.t1 AT1G69870 33.157 567 367 8 41 599 48 610 1.84e-112 350
MS.gene015321.t1 AT5G13400 34.043 564 356 7 33 586 52 609 1.16e-108 340
MS.gene015321.t1 AT1G59740 34.775 601 361 12 7 597 3 582 2.00e-108 338
MS.gene015321.t1 AT1G68570 34.790 595 364 13 15 600 2 581 2.30e-107 335
MS.gene015321.t1 AT1G68570 35.443 553 341 10 57 600 6 551 2.08e-105 330
MS.gene015321.t1 AT1G72140 34.159 565 324 8 32 585 22 549 3.35e-103 323
MS.gene015321.t1 AT1G33440 36.077 571 335 10 24 585 18 567 7.89e-102 321
MS.gene015321.t1 AT1G18880 32.264 561 365 9 48 599 23 577 1.15e-100 318
MS.gene015321.t1 AT1G72125 33.913 575 349 9 18 585 3 553 1.24e-100 317
MS.gene015321.t1 AT1G27080 33.512 561 353 10 44 599 14 559 1.29e-100 317
MS.gene015321.t1 AT2G37900 33.267 505 319 7 87 589 2 490 4.79e-100 313
MS.gene015321.t1 AT3G21670 34.286 560 342 7 30 582 12 552 7.13e-100 316
MS.gene015321.t1 AT1G22540 32.979 564 346 8 32 590 18 554 2.05e-97 308
MS.gene015321.t1 AT5G46050 36.304 460 278 7 130 585 1 449 3.97e-97 305
MS.gene015321.t1 AT1G72120 33.043 575 350 9 18 585 3 549 1.93e-96 306
MS.gene015321.t1 AT1G72130 34.909 550 304 9 45 585 26 530 3.03e-96 305
MS.gene015321.t1 AT5G62680 32.182 550 356 9 48 586 47 590 5.86e-96 306
MS.gene015321.t1 AT3G47960 31.145 594 375 11 4 586 36 606 3.61e-95 305
MS.gene015321.t1 AT1G27080 33.083 532 336 10 73 599 1 517 1.78e-93 298
MS.gene015321.t1 AT1G22550 32.702 581 348 10 19 585 5 556 1.14e-90 291
MS.gene015321.t1 AT1G22570 33.214 557 340 10 19 566 5 538 1.02e-89 288
MS.gene015321.t1 AT1G69850 30.324 587 391 8 21 593 2 584 4.65e-87 282
MS.gene015321.t1 AT5G62730 30.835 587 356 12 17 585 28 582 5.71e-87 282
MS.gene015321.t1 AT1G22570 33.984 512 306 10 64 566 13 501 2.10e-84 273
MS.gene015321.t1 AT1G27040 29.381 565 383 6 30 591 13 564 5.53e-83 271
MS.gene015321.t1 AT1G27040 29.381 565 383 6 30 591 9 560 6.94e-83 271
MS.gene015321.t1 AT1G52190 28.419 563 376 10 41 585 13 566 2.61e-81 268
MS.gene015321.t1 AT5G62730 30.741 553 334 11 50 585 3 523 6.37e-81 265
MS.gene015321.t1 AT3G45720 28.731 536 355 7 66 598 41 552 1.78e-80 264
MS.gene015321.t1 AT3G16180 29.451 601 391 14 16 599 2 586 6.52e-80 263
MS.gene015321.t1 AT3G45650 29.138 580 376 11 24 599 2 550 2.76e-79 261
MS.gene015321.t1 AT3G45680 28.897 571 378 9 30 598 8 552 4.97e-79 260
MS.gene015321.t1 AT3G45710 29.264 557 369 7 44 598 21 554 9.49e-79 259
MS.gene015321.t1 AT1G27040 29.609 537 362 6 58 591 9 532 5.45e-78 257
MS.gene015321.t1 AT5G14940 29.359 562 329 15 64 599 27 546 1.20e-76 254
MS.gene015321.t1 AT1G72130 34.234 444 248 7 151 585 4 412 4.94e-75 246
MS.gene015321.t1 AT1G72130 34.234 444 248 7 151 585 4 412 4.94e-75 246
MS.gene015321.t1 AT3G45660 29.020 541 353 10 62 598 39 552 8.09e-75 249
MS.gene015321.t1 AT3G45660 29.020 541 353 10 62 598 39 552 8.09e-75 249
MS.gene015321.t1 AT3G45650 28.053 606 375 12 24 599 2 576 1.20e-74 249
MS.gene015321.t1 AT3G45660 29.020 541 353 10 62 598 60 573 1.28e-74 249
MS.gene015321.t1 AT5G28470 27.687 549 388 5 41 587 14 555 1.94e-74 248
MS.gene015321.t1 AT1G69860 30.459 545 354 11 48 586 22 547 4.95e-74 247
MS.gene015321.t1 AT3G45700 27.599 558 372 8 43 598 15 542 4.51e-72 241
MS.gene015321.t1 AT5G28470 27.505 549 387 6 41 587 14 553 1.45e-71 241
MS.gene015321.t1 AT3G25260 27.828 557 345 11 34 585 11 515 7.30e-67 227
MS.gene015321.t1 AT3G01350 27.778 558 354 12 64 596 27 560 3.00e-65 224
MS.gene015321.t1 AT3G45690 26.297 559 347 10 43 600 17 511 2.85e-63 217
MS.gene015321.t1 AT3G25280 26.655 574 362 14 17 585 2 521 6.89e-57 200
MS.gene015321.t1 AT2G38100 23.993 546 368 16 62 599 9 515 1.55e-33 135
MS.gene015321.t1 AT2G38100 23.993 546 368 16 62 599 15 521 1.72e-33 135
MS.gene015321.t1 AT2G38100 23.881 536 362 15 72 599 2 499 1.79e-33 134
MS.gene015321.t1 AT5G11570 30.000 250 163 5 338 585 237 476 1.40e-29 122
MS.gene015321.t1 AT5G11570 30.093 216 144 4 54 266 23 234 3.07e-22 100

Find 161 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGGAACAGGCGCCTTTC+TGG 0.168501 5.4:+8048746 None:intergenic
TAAAACATGTGCTGTCTTTC+AGG 0.175129 5.4:-8049706 MS.gene015321:CDS
CTTTCCTAAGTGACTCTTAT+TGG 0.215786 5.4:-8049737 MS.gene015321:CDS
ACTTCTTCAACTTGACTTAC+AGG 0.233280 5.4:+8048709 None:intergenic
TACTGAGACTCCTTCCAATT+TGG 0.238205 5.4:-8048678 MS.gene015321:CDS
CTGGACTAGTTGAATGTTAT+AGG 0.257127 5.4:-8048381 MS.gene015321:CDS
GAATGTGGGCTCTTGGCTTC+TGG 0.265662 5.4:-8049256 MS.gene015321:CDS
TTTCCTAAGTGACTCTTATT+GGG 0.274400 5.4:-8049736 MS.gene015321:CDS
AGCTGACCATCTTCCAGATT+TGG 0.275707 5.4:+8052937 None:intergenic
CCAGATTTGGCTCTTATTGC+AGG 0.276985 5.4:+8052950 None:intergenic
TGACCTTTATTGAGGTTTAC+TGG 0.278086 5.4:+8048085 None:intergenic
ATCCCTCAGTATGCACTTAT+AGG 0.280570 5.4:-8048292 MS.gene015321:CDS
CTTTGCAGTGGCGGCAGTCT+TGG 0.311213 5.4:+8048344 None:intergenic
GATTCATTCCCACAACCTTT+AGG 0.315220 5.4:+8049518 None:intergenic
TCTACCTAGCTTTGAACTTT+GGG 0.317823 5.4:-8049322 MS.gene015321:CDS
CGAGTACTTTGAGCATCTTC+TGG 0.327628 5.4:-8048318 MS.gene015321:CDS
CCACTTTGCACATGCAATAT+AGG 0.335349 5.4:+8048009 None:intergenic
TTCTACCTAGCTTTGAACTT+TGG 0.355047 5.4:-8049323 MS.gene015321:CDS
GAAAACCACCGAGTATATTA+TGG 0.363778 5.4:+8048648 None:intergenic
CTTGGCTTCTGGCTGTCTGC+AGG 0.364129 5.4:-8049245 MS.gene015321:CDS
CAACTATGTAAGTAGCTTAC+TGG 0.364391 5.4:-8048158 MS.gene015321:CDS
CAACCGAATATTGCCACATT+CGG 0.367343 5.4:-8049410 MS.gene015321:CDS
TCAATAAAGGTCACCTAGAT+AGG 0.368292 5.4:-8048075 MS.gene015321:CDS
AAACAATATCAGTGCGATAA+AGG 0.368557 5.4:+8049217 None:intergenic
TCAGAAGAATTGACTCTAGA+TGG 0.370202 5.4:-8052995 MS.gene015321:CDS
TCGATCTATCTCATTGCCTT+GGG 0.371691 5.4:-8049446 MS.gene015321:CDS
TACATAGTTGCCAAGGGAAA+TGG 0.373598 5.4:+8048171 None:intergenic
GCACTGATATTGTTTCTTGT+TGG 0.378724 5.4:-8049209 MS.gene015321:CDS
ATTATGGTGCAGAGCCAAAT+TGG 0.381296 5.4:+8048664 None:intergenic
TTTGTTGTGATGAAGGTTCT+TGG 0.383790 5.4:-8048806 MS.gene015321:intron
AACCGAATATTGCCACATTC+GGG 0.389216 5.4:-8049409 MS.gene015321:CDS
TTGATTAAACCTAAAGGTTG+TGG 0.389825 5.4:-8049527 MS.gene015321:CDS
GCCCCGAATGTGGCAATATT+CGG 0.395016 5.4:+8049407 None:intergenic
TACAAGTCATCTCCATTTGA+TGG 0.396660 5.4:+8049089 None:intergenic
CCAGATGGCTTAAAGAGTTT+CGG 0.398986 5.4:-8048214 MS.gene015321:CDS
CCGAAACTCTTTAAGCCATC+TGG 0.412448 5.4:+8048214 None:intergenic
CTCGATCTATCTCATTGCCT+TGG 0.417455 5.4:-8049447 MS.gene015321:CDS
GATGGAAGTGTTGATTTCAA+TGG 0.424543 5.4:-8052977 MS.gene015321:CDS
TGATTAAACCTAAAGGTTGT+GGG 0.432667 5.4:-8049526 MS.gene015321:CDS
CCATTTGCTCACATTGTTAG+CGG 0.435931 5.4:+8049794 None:intergenic
TTTGTCCTACCACCCTTGTC+AGG 0.440304 5.4:+8049829 None:intergenic
AAAGTTGAAATGCCATCAAA+TGG 0.443101 5.4:-8049101 MS.gene015321:CDS
CCTGCAATAAGAGCCAAATC+TGG 0.443888 5.4:-8052950 MS.gene015321:CDS
GAGACGCCATGGGTTGGAAC+AGG 0.445766 5.4:+8048735 None:intergenic
CACCATTCTCGTCTATTTCG+AGG 0.447297 5.4:-8049285 MS.gene015321:CDS
AGAGGAAGTAAAACCTATCT+AGG 0.447626 5.4:+8048062 None:intergenic
CTCTTCTTGATTAAACCTAA+AGG 0.452670 5.4:-8049533 MS.gene015321:CDS
TTGATGCAGCAACAAGGACT+TGG 0.457746 5.4:+8049132 None:intergenic
CTCGTCTATTTCGAGGATGA+AGG 0.458526 5.4:-8049278 MS.gene015321:CDS
TATCTCATTGCCTTGGGGAA+TGG 0.461561 5.4:-8049440 MS.gene015321:CDS
ATGTGGAAAACATTCAAGTT+GGG 0.461991 5.4:-8049489 MS.gene015321:CDS
CTGAGGTGTTTATGTATGTA+GGG 0.463211 5.4:-8048264 MS.gene015321:CDS
GATGAAGGAATGTGGGCTCT+TGG 0.464285 5.4:-8049263 MS.gene015321:CDS
GAACCAATGTCTGGCAACTC+TGG 0.466451 5.4:-8049886 MS.gene015321:CDS
TCTACGGAGGATCACATGCC+GGG 0.468350 5.4:-8048115 MS.gene015321:CDS
CCGCTAACAATGTGAGCAAA+TGG 0.471071 5.4:-8049794 MS.gene015321:CDS
TCTGAGGTGTTTATGTATGT+AGG 0.471453 5.4:-8048265 MS.gene015321:CDS
GTCCGACTCTAAGGGACTTA+CGG 0.471843 5.4:-8048458 MS.gene015321:CDS
TCGAATTCTCGATCCATTTG+TGG 0.474043 5.4:-8048494 MS.gene015321:CDS
CCTGGCAAGAGGGTTGCCAC+TGG 0.476047 5.4:+8049160 None:intergenic
AATGTGGAAAACATTCAAGT+TGG 0.478518 5.4:-8049490 MS.gene015321:CDS
ACTTACGGAGCTTCAGAGAA+TGG 0.483312 5.4:-8048443 MS.gene015321:CDS
TGCATGACATCCATTTCCCT+TGG 0.484971 5.4:-8048181 MS.gene015321:CDS
TATCTAGGTGACCTTTATTG+AGG 0.485934 5.4:+8048077 None:intergenic
AAACATTCAAGTTGGGAGAT+GGG 0.491686 5.4:-8049482 MS.gene015321:CDS
AGAGTTAGAAGTCTCTAAAG+AGG 0.492373 5.4:-8053288 MS.gene015321:intron
CGAATTCTCGATCCATTTGT+GGG 0.495488 5.4:-8048493 MS.gene015321:CDS
CCAGTGGCAACCCTCTTGCC+AGG 0.497542 5.4:-8049160 MS.gene015321:CDS
AACAAGGACTTGGCAGAACC+TGG 0.499858 5.4:+8049142 None:intergenic
GTGGTACAAGAGTATACAGC+TGG 0.502476 5.4:-8047990 MS.gene015321:CDS
AAAACATTCAAGTTGGGAGA+TGG 0.502988 5.4:-8049483 MS.gene015321:CDS
GACCTTTATTGAGGTTTACT+GGG 0.503932 5.4:+8048086 None:intergenic
TGTTTACATCTTCTCTCTAG+TGG 0.504895 5.4:-8049763 MS.gene015321:CDS
ATCCCAGTAAACCTCAATAA+AGG 0.507470 5.4:-8048088 MS.gene015321:CDS
GTAATAGCAATGGTTTCAGC+TGG 0.515102 5.4:-8048400 MS.gene015321:CDS
CAAGACTGCCGCCACTGCAA+AGG 0.518476 5.4:-8048343 MS.gene015321:CDS
CTCATTGCCTTGGGGAATGG+AGG 0.519787 5.4:-8049437 MS.gene015321:CDS
GAGGTACGATGACAAGGATA+AGG 0.524291 5.4:+8049553 None:intergenic
TCGATGTCAAGGCGGCTAAG+AGG 0.525443 5.4:+8048044 None:intergenic
CTGGCAAGAGGGTTGCCACT+GGG 0.527982 5.4:+8049161 None:intergenic
CTCTACGGAGGATCACATGC+CGG 0.528318 5.4:-8048116 MS.gene015321:CDS
AGCTACTTACATAGTTGCCA+AGG 0.528334 5.4:+8048164 None:intergenic
ATGCCAGAGTTGCCAGACAT+TGG 0.529945 5.4:+8049883 None:intergenic
GGCTTGAAATGTCGGTACTT+TGG 0.530731 5.4:+8049182 None:intergenic
TACTCGAGCCTTTGCAGTGG+CGG 0.530816 5.4:+8048335 None:intergenic
GTTGCCCAAAGTTCAAAGCT+AGG 0.531984 5.4:+8049318 None:intergenic
TGCCACTGGGCTTGAAATGT+CGG 0.534487 5.4:+8049174 None:intergenic
AACATTCAAGTTGGGAGATG+GGG 0.535122 5.4:-8049481 MS.gene015321:CDS
CTTACGGAGCTTCAGAGAAT+GGG 0.535433 5.4:-8048442 MS.gene015321:CDS
TTCAATGCTCAAACACCAGA+TGG 0.538636 5.4:-8048229 MS.gene015321:CDS
AAATCTGGAAGATGGTCAGC+TGG 0.539495 5.4:-8052935 MS.gene015321:CDS
AAGGCGCCTGTTCCAACCCA+TGG 0.544927 5.4:-8048741 MS.gene015321:CDS
CTTAGCCGCCTTGACATCGA+TGG 0.545584 5.4:-8048041 MS.gene015321:CDS
TTGATCAGTGAACCAATGTC+TGG 0.547412 5.4:-8049895 MS.gene015321:intron
GTTTACATCTTCTCTCTAGT+GGG 0.548661 5.4:-8049762 MS.gene015321:CDS
TGTTATAGCTGTAATAGCAA+TGG 0.550110 5.4:-8048410 MS.gene015321:CDS
AAGTCCTTGTTGCTGCATCA+AGG 0.550980 5.4:-8049130 MS.gene015321:CDS
CAAGAAGAGGTACGATGACA+AGG 0.553042 5.4:+8049547 None:intergenic
TCAAAGCAAGACATGCTAGC+TGG 0.554527 5.4:+8048553 None:intergenic
AATTAGACTTTGAAGCTACC+TGG 0.558655 5.4:+8047941 None:intergenic
CGCAAAGAGAATGATGAGCC+AGG 0.562335 5.4:-8047959 MS.gene015321:CDS
TAGGTAGAAGTAGCTAAAGA+AGG 0.563359 5.4:+8049337 None:intergenic
TAAGAGCCAAATCTGGAAGA+TGG 0.566680 5.4:-8052943 MS.gene015321:CDS
TTCCCCAATAAGAGTCACTT+AGG 0.572082 5.4:+8049733 None:intergenic
AGGACAGAGACGCCATGGGT+TGG 0.573128 5.4:+8048729 None:intergenic
ATCCTCGAAATAGACGAGAA+TGG 0.573136 5.4:+8049283 None:intergenic
CTTTCCTTGATGCAGCAACA+AGG 0.573520 5.4:+8049126 None:intergenic
CTTTAGGTTTAATCAAGAAG+AGG 0.576154 5.4:+8049534 None:intergenic
AACAATGTGAGCAAATGGAC+TGG 0.581553 5.4:-8049789 MS.gene015321:CDS
GAGCTTCAGAGAATGGGAGT+TGG 0.583029 5.4:-8048436 MS.gene015321:CDS
TTCCTAAGTGACTCTTATTG+GGG 0.583654 5.4:-8049735 MS.gene015321:CDS
AATTAAGTCCATCGATGTCA+AGG 0.584514 5.4:+8048033 None:intergenic
CGAATGTGGCAATATTCGGT+TGG 0.585478 5.4:+8049411 None:intergenic
CGATCTATCTCATTGCCTTG+GGG 0.585703 5.4:-8049445 MS.gene015321:CDS
CTCCGTAAGTCCCTTAGAGT+CGG 0.591568 5.4:+8048456 None:intergenic
CTTGTATAACATGGATACAA+AGG 0.592055 5.4:-8049072 MS.gene015321:CDS
GACGAGGAGCACTCGAAGGA+GGG 0.592862 5.4:-8049374 MS.gene015321:CDS
ATTTCGAGGATGAAGGAATG+TGG 0.593541 5.4:-8049271 MS.gene015321:CDS
AGAGATCAAGATAACCAGAA+AGG 0.593846 5.4:-8048760 MS.gene015321:CDS
CTCCTATAAGTGCATACTGA+GGG 0.598714 5.4:+8048290 None:intergenic
AGGTTTACTGGGATCCACCC+CGG 0.598989 5.4:+8048097 None:intergenic
TGACGAGGAGCACTCGAAGG+AGG 0.599052 5.4:-8049375 MS.gene015321:CDS
CTTACAGGACAGAGACGCCA+TGG 0.599282 5.4:+8048724 None:intergenic
CTTGGCAGAACCTGGCAAGA+GGG 0.603089 5.4:+8049150 None:intergenic
ACCTAGTGGTATTCCTGACA+AGG 0.604915 5.4:-8049842 MS.gene015321:CDS
TGGAGATGACTTGTATAACA+TGG 0.607014 5.4:-8049081 MS.gene015321:CDS
ACTTGGCAGAACCTGGCAAG+AGG 0.608237 5.4:+8049149 None:intergenic
TGGTGCAGAGCCAAATTGGA+AGG 0.610894 5.4:+8048668 None:intergenic
AAACTGATCAGCCCCGAATG+TGG 0.611538 5.4:+8049397 None:intergenic
TGTAGTTATGAAGATCTCTA+CGG 0.612602 5.4:-8048131 MS.gene015321:CDS
TACTCTGAAATTGTAAACAG+TGG 0.613535 5.4:+8048579 None:intergenic
ATTTGGCTCTTATTGCAGGA+CGG 0.614770 5.4:+8052954 None:intergenic
CGGGGCTGATCAGTTTGACG+AGG 0.615131 5.4:-8049390 MS.gene015321:CDS
GTATTCCTGACAAGGGTGGT+AGG 0.618180 5.4:-8049834 MS.gene015321:CDS
TTTCGAGGATGAAGGAATGT+GGG 0.619267 5.4:-8049270 MS.gene015321:CDS
CGGAGGATCACATGCCGGGG+TGG 0.619996 5.4:-8048111 MS.gene015321:CDS
GAAGGAGGGTCACAATAAAG+TGG 0.621467 5.4:-8049360 MS.gene015321:CDS
ACTTGAACCCGTCTGTGTGG+AGG 0.629185 5.4:+8049021 None:intergenic
TGCACTTATAGGAGCTTCTG+AGG 0.629617 5.4:-8048281 MS.gene015321:CDS
GCTCTGCACCATAATATACT+CGG 0.638311 5.4:-8048656 MS.gene015321:CDS
CCCTTGTCAGGAATACCACT+AGG 0.642342 5.4:+8049841 None:intergenic
CCTATATTGCATGTGCAAAG+TGG 0.646472 5.4:-8048009 MS.gene015321:CDS
GTTTGACGAGGAGCACTCGA+AGG 0.649207 5.4:-8049378 MS.gene015321:CDS
GCTCCTATAAGTGCATACTG+AGG 0.657896 5.4:+8048289 None:intergenic
TTGGTAACCTCCATTCCCCA+AGG 0.658810 5.4:+8049430 None:intergenic
ACCGAATATTGCCACATTCG+GGG 0.660107 5.4:-8049408 MS.gene015321:CDS
CTTACTTGAACCCGTCTGTG+TGG 0.660599 5.4:+8049018 None:intergenic
CGGGATTGGAGTGAACCTAG+TGG 0.661833 5.4:-8049856 MS.gene015321:CDS
GCTACTTACATAGTTGCCAA+GGG 0.663270 5.4:+8048165 None:intergenic
TTACAGGACAGAGACGCCAT+GGG 0.668038 5.4:+8048725 None:intergenic
AAGCAAGACATGCTAGCTGG+TGG 0.671852 5.4:+8048556 None:intergenic
AAGTACTCGAGCCTTTGCAG+TGG 0.678677 5.4:+8048332 None:intergenic
CTACGGAGGATCACATGCCG+GGG 0.680505 5.4:-8048114 MS.gene015321:CDS
CCTAGTGGTATTCCTGACAA+GGG 0.693962 5.4:-8049841 MS.gene015321:CDS
AGTGGTATTCCTGACAAGGG+TGG 0.695849 5.4:-8049838 MS.gene015321:CDS
TGGTACAAGAGTATACAGCT+GGG 0.699684 5.4:-8047989 MS.gene015321:CDS
GGGAATGAATCAATTCAATG+TGG 0.710897 5.4:-8049506 MS.gene015321:CDS
AGTTATGAAGATCTCTACGG+AGG 0.723212 5.4:-8048128 MS.gene015321:CDS
TACCGACATTTCAAGCCCAG+TGG 0.725447 5.4:-8049176 MS.gene015321:CDS
TAAGTCCATCGATGTCAAGG+CGG 0.726934 5.4:+8048036 None:intergenic
CTGCACCATAATATACTCGG+TGG 0.739304 5.4:-8048653 MS.gene015321:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAAAATAAAATTAATA+TGG + chr5.4:8048386-8048405 None:intergenic 0.0%
!! AAAGTAATATATAAAATTCA+TGG - chr5.4:8050678-8050697 MS.gene015321:intron 10.0%
!!! AAATTACAACTATTTTTTTA+AGG - chr5.4:8049489-8049508 MS.gene015321:CDS 10.0%
!!! AAATTTTAATAAAAAGAAAG+GGG - chr5.4:8049657-8049676 MS.gene015321:intron 10.0%
!!! GAAAATTTTAATAAAAAGAA+AGG - chr5.4:8049655-8049674 MS.gene015321:intron 10.0%
!! ATAATGTTAAAGAATTATTG+TGG - chr5.4:8049223-8049242 MS.gene015321:CDS 15.0%
!! CAAAATTAGCTAAATAATAT+TGG + chr5.4:8052329-8052348 None:intergenic 15.0%
!! TAATGTTAAAGAATTATTGT+GGG - chr5.4:8049224-8049243 MS.gene015321:CDS 15.0%
!! TAGTTGAAAAAAAACAAAAA+AGG - chr5.4:8048866-8048885 MS.gene015321:intron 15.0%
!! TTTAGATGTATATATTTATG+AGG - chr5.4:8049596-8049615 MS.gene015321:intron 15.0%
!!! ATAAATTTTCTCTTATATAC+TGG - chr5.4:8050603-8050622 MS.gene015321:intron 15.0%
!!! CAATATTATTTAGCTAATTT+TGG - chr5.4:8052327-8052346 MS.gene015321:intron 15.0%
!!! TATGTCAAAAACAATTTTAA+GGG + chr5.4:8048055-8048074 None:intergenic 15.0%
!!! TTATCAGTTTTATGTATAAA+AGG - chr5.4:8049013-8049032 MS.gene015321:intron 15.0%
!! AATATATTGTTAGGTTACTT+AGG + chr5.4:8050867-8050886 None:intergenic 20.0%
!! ATGAGTCAATTTATTGTATT+TGG + chr5.4:8049946-8049965 None:intergenic 20.0%
!! TATAAACACCATCTTATTAA+TGG + chr5.4:8050816-8050835 None:intergenic 20.0%
!! TATTATGTTATCTATATGCA+TGG + chr5.4:8051011-8051030 None:intergenic 20.0%
!! TCACTATAATATTAAGAACA+TGG - chr5.4:8051289-8051308 MS.gene015321:intron 20.0%
!! TTAAATTAACCCACTTAAAT+TGG + chr5.4:8050474-8050493 None:intergenic 20.0%
!!! ACTCATTCTAGTAATTTTAT+AGG + chr5.4:8049975-8049994 None:intergenic 20.0%
!!! ACTTTTTTATGGTGTAAAAA+AGG - chr5.4:8049633-8049652 MS.gene015321:intron 20.0%
!!! ATGATCGATTTACTTTTTTA+TGG - chr5.4:8049622-8049641 MS.gene015321:intron 20.0%
!!! ATTTTAGATAGCTTATCATA+AGG - chr5.4:8048932-8048951 MS.gene015321:intron 20.0%
!!! GTATGTCAAAAACAATTTTA+AGG + chr5.4:8048056-8048075 None:intergenic 20.0%
!!! TCAATTAAAGTTGATGTATT+TGG - chr5.4:8049907-8049926 MS.gene015321:intron 20.0%
!!! TGTTTATAGTGCTTTTATAA+AGG - chr5.4:8050828-8050847 MS.gene015321:intron 20.0%
!!! TTACAACTTCATTTTTTTGA+AGG - chr5.4:8049519-8049538 MS.gene015321:CDS 20.0%
!!! TTGTTTTTTTTCAACTAACA+AGG + chr5.4:8048863-8048882 None:intergenic 20.0%
!!! TTTAACTACTTTTTTCCAAA+AGG + chr5.4:8050720-8050739 None:intergenic 20.0%
! AGAGGAATAATGTACATATT+TGG + chr5.4:8048009-8048028 None:intergenic 25.0%
! CATAAGGAATAGTAAATGAA+AGG - chr5.4:8048948-8048967 MS.gene015321:intron 25.0%
! TCACATCTATAATCTTCTTT+AGG - chr5.4:8050175-8050194 MS.gene015321:intron 25.0%
! TGACTAATCAATAAATCTTC+TGG - chr5.4:8051638-8051657 MS.gene015321:intron 25.0%
! TGTATACAATTAAACTCAAG+AGG + chr5.4:8049420-8049439 None:intergenic 25.0%
! TTATTCTGAGTATGGAAAAT+TGG - chr5.4:8050146-8050165 MS.gene015321:intron 25.0%
!! AAAAGGAAAAACGAAAGTTT+TGG - chr5.4:8049030-8049049 MS.gene015321:CDS 25.0%
!! ATGAAAATCAACAATCCTTT+TGG - chr5.4:8050702-8050721 MS.gene015321:intron 25.0%
!! GACTGAAATAATTTTGTACA+AGG + chr5.4:8051098-8051117 None:intergenic 25.0%
!! TGTTTTCGTAAGAAAAAGTA+TGG + chr5.4:8048643-8048662 None:intergenic 25.0%
!! TTTGAATTTTGTATGCCAAA+TGG + chr5.4:8049064-8049083 None:intergenic 25.0%
!!! ACACACATAAGAAAGTATTA+TGG + chr5.4:8052275-8052294 None:intergenic 25.0%
!!! ATTTTTTTTCCTCAAATTCC+CGG + chr5.4:8048743-8048762 None:intergenic 25.0%
!!! CATGGTTTTAAGAATTAAAG+AGG + chr5.4:8048027-8048046 None:intergenic 25.0%
!!! GCTAAAAATAAAAGAGTGTT+TGG + chr5.4:8051602-8051621 None:intergenic 25.0%
!!! TACCTAAACAATTCGTTTTT+TGG - chr5.4:8049381-8049400 MS.gene015321:CDS 25.0%
!!! TCAAATCATTTTAGTTCAGT+AGG + chr5.4:8052402-8052421 None:intergenic 25.0%
!!! TTTTCTGTCTTATGTTGTTT+TGG + chr5.4:8051160-8051179 None:intergenic 25.0%
!!! TTTTTAAGTTTTCCCACAAA+TGG + chr5.4:8052764-8052783 None:intergenic 25.0%
AAACAATATCAGTGCGATAA+AGG + chr5.4:8052028-8052047 None:intergenic 30.0%
AAAGTTGAAATGCCATCAAA+TGG - chr5.4:8052141-8052160 MS.gene015321:intron 30.0%
AATGTGGAAAACATTCAAGT+TGG - chr5.4:8051752-8051771 MS.gene015321:intron 30.0%
ACCTTCATCACAACAAAAAA+TGG + chr5.4:8052433-8052452 None:intergenic 30.0%
ACTAACTACCTAGTTATTGA+GGG - chr5.4:8050096-8050115 MS.gene015321:intron 30.0%
ATAATGTCCTTCCCTTAAAA+GGG + chr5.4:8049314-8049333 None:intergenic 30.0%
ATACTGGTACTCAAAAAGAA+TGG - chr5.4:8050619-8050638 MS.gene015321:intron 30.0%
CAAGTTTAAGCATGTGAATT+CGG + chr5.4:8049165-8049184 None:intergenic 30.0%
CACCAAAAAACGAATTGTTT+AGG + chr5.4:8049386-8049405 None:intergenic 30.0%
CATCTTATTAATGGTTTCAG+AGG + chr5.4:8050807-8050826 None:intergenic 30.0%
CTCTTCTTGATTAAACCTAA+AGG - chr5.4:8051709-8051728 MS.gene015321:intron 30.0%
CTTGTATAACATGGATACAA+AGG - chr5.4:8052170-8052189 MS.gene015321:intron 30.0%
GAGTAATAATTAGCCCAAAA+TGG - chr5.4:8049991-8050010 MS.gene015321:intron 30.0%
GTGAATATTCATAGTCATAG+AGG - chr5.4:8049689-8049708 MS.gene015321:intron 30.0%
GTTGATTAATATGCATGCTA+TGG - chr5.4:8050122-8050141 MS.gene015321:intron 30.0%
TACGTATAGTTTATGATAGC+TGG - chr5.4:8048798-8048817 MS.gene015321:intron 30.0%
TACTAACTACCTAGTTATTG+AGG - chr5.4:8050095-8050114 MS.gene015321:intron 30.0%
TCACGTAATATACATTTGCA+TGG + chr5.4:8050260-8050279 None:intergenic 30.0%
TCTTAAAGCTTATTGAATCC+CGG - chr5.4:8048721-8048740 MS.gene015321:CDS 30.0%
TGATTAAACCTAAAGGTTGT+GGG - chr5.4:8051716-8051735 MS.gene015321:intron 30.0%
TGCTTCACACTTACTTATTT+GGG - chr5.4:8049186-8049205 MS.gene015321:CDS 30.0%
TGTAGTTATGAAGATCTCTA+CGG - chr5.4:8053111-8053130 MS.gene015321:intron 30.0%
TGTTATAGCTGTAATAGCAA+TGG - chr5.4:8052832-8052851 MS.gene015321:intron 30.0%
TTGATTAAACCTAAAGGTTG+TGG - chr5.4:8051715-8051734 MS.gene015321:intron 30.0%
TTGCTTCACACTTACTTATT+TGG - chr5.4:8049185-8049204 MS.gene015321:CDS 30.0%
TTGTTTCGTGTAAGTTAGTT+TGG - chr5.4:8050198-8050217 MS.gene015321:intron 30.0%
TTTCCTAAGTGACTCTTATT+GGG - chr5.4:8051506-8051525 MS.gene015321:intron 30.0%
! ACCAATTTACTCTTCCATTT+TGG + chr5.4:8050008-8050027 None:intergenic 30.0%
! ATGATCTAAAGTTTGACTGA+AGG - chr5.4:8049332-8049351 MS.gene015321:CDS 30.0%
! ATGTGGAAAACATTCAAGTT+GGG - chr5.4:8051753-8051772 MS.gene015321:intron 30.0%
! ATTGTAAACAGTGGTTTTCA+TGG + chr5.4:8052657-8052676 None:intergenic 30.0%
! CCAATTTACTCTTCCATTTT+GGG + chr5.4:8050007-8050026 None:intergenic 30.0%
! CTTGAAGACACTTTTGTATA+TGG + chr5.4:8050646-8050665 None:intergenic 30.0%
! CTTTAGGTTTAATCAAGAAG+AGG + chr5.4:8051711-8051730 None:intergenic 30.0%
! GATAAGATTTTGCACTACTT+GGG - chr5.4:8049833-8049852 MS.gene015321:CDS 30.0%
! TGATAAGATTTTGCACTACT+TGG - chr5.4:8049832-8049851 MS.gene015321:CDS 30.0%
! TTGCATGGAAGTATATTACT+TGG + chr5.4:8050245-8050264 None:intergenic 30.0%
!! CTCTGAAACCATTAATAAGA+TGG - chr5.4:8050805-8050824 MS.gene015321:intron 30.0%
!! TACTCTGAAATTGTAAACAG+TGG + chr5.4:8052666-8052685 None:intergenic 30.0%
!! TGGCTTTGATATATATGACA+GGG - chr5.4:8051658-8051677 MS.gene015321:intron 30.0%
!!! GGTATACTTTTTTTGACAAG+AGG - chr5.4:8050058-8050077 MS.gene015321:intron 30.0%
!!! TACTTTTTTTGACAAGAGGT+TGG - chr5.4:8050062-8050081 MS.gene015321:intron 30.0%
!!! TCATTTTAACTGCACTTACT+CGG - chr5.4:8048549-8048568 MS.gene015321:CDS 30.0%
!!! TCCATTTTTTGTTGTGATGA+AGG - chr5.4:8052429-8052448 MS.gene015321:intron 30.0%
!!! TTTTTAGTTACCATAGTTCC+CGG + chr5.4:8049746-8049765 None:intergenic 30.0%
!!! TTTTTTTTCCTCAAATTCCC+GGG + chr5.4:8048742-8048761 None:intergenic 30.0%
AATTAAGTCCATCGATGTCA+AGG + chr5.4:8053212-8053231 None:intergenic 35.0%
ACTTAAAAAGTCCGACTCTA+AGG - chr5.4:8052775-8052794 MS.gene015321:intron 35.0%
ACTTCTTCAACTTGACTTAC+AGG + chr5.4:8052536-8052555 None:intergenic 35.0%
AGAGATCAAGATAACCAGAA+AGG - chr5.4:8052482-8052501 MS.gene015321:intron 35.0%
AGAGGAAGTAAAACCTATCT+AGG + chr5.4:8053183-8053202 None:intergenic 35.0%
AGTATTATGGTTTCAGCTGA+AGG + chr5.4:8052262-8052281 None:intergenic 35.0%
AGTTTATGATAGCTGGAGAA+AGG - chr5.4:8048805-8048824 MS.gene015321:intron 35.0%
ATAGACAACCCTTTACAGAA+TGG - chr5.4:8050941-8050960 MS.gene015321:intron 35.0%
ATCCCAGTAAACCTCAATAA+AGG - chr5.4:8053154-8053173 MS.gene015321:intron 35.0%
ATCTTGTGTGTGCATATGTA+TGG - chr5.4:8050908-8050927 MS.gene015321:intron 35.0%
ATGTAACCAAATGATCACGT+GGG - chr5.4:8049884-8049903 MS.gene015321:CDS 35.0%
CAAAATGCAGAAAAGAAGCA+TGG - chr5.4:8049771-8049790 MS.gene015321:CDS 35.0%
CAACTATGTAAGTAGCTTAC+TGG - chr5.4:8053084-8053103 MS.gene015321:intron 35.0%
CATAATGTCCTTCCCTTAAA+AGG + chr5.4:8049315-8049334 None:intergenic 35.0%
CATCACAACCATTCTGTAAA+GGG + chr5.4:8050952-8050971 None:intergenic 35.0%
CCCAAAATGGAAGAGTAAAT+TGG - chr5.4:8050004-8050023 MS.gene015321:intron 35.0%
CTTAAAAAGTCCGACTCTAA+GGG - chr5.4:8052776-8052795 MS.gene015321:intron 35.0%
CTTAAAGCTTATTGAATCCC+GGG - chr5.4:8048722-8048741 MS.gene015321:CDS 35.0%
CTTTCCTAAGTGACTCTTAT+TGG - chr5.4:8051505-8051524 MS.gene015321:intron 35.0%
GAAAACCACCGAGTATATTA+TGG + chr5.4:8052597-8052616 None:intergenic 35.0%
GACCTTTATTGAGGTTTACT+GGG + chr5.4:8053159-8053178 None:intergenic 35.0%
GCTATGGTTTATTCTGAGTA+TGG - chr5.4:8050138-8050157 MS.gene015321:intron 35.0%
GCTTCACACTTACTTATTTG+GGG - chr5.4:8049187-8049206 MS.gene015321:CDS 35.0%
GGGAATGAATCAATTCAATG+TGG - chr5.4:8051736-8051755 MS.gene015321:intron 35.0%
GTAGTGCAAAATCTTATCAC+TGG + chr5.4:8049831-8049850 None:intergenic 35.0%
GTGATAACACTTCAAAAAGC+AGG + chr5.4:8050783-8050802 None:intergenic 35.0%
GTTTACATCTTCTCTCTAGT+GGG - chr5.4:8051480-8051499 MS.gene015321:intron 35.0%
TAAAACATGTGCTGTCTTTC+AGG - chr5.4:8051536-8051555 MS.gene015321:intron 35.0%
TAATGTCCTTCCCTTAAAAG+GGG + chr5.4:8049313-8049332 None:intergenic 35.0%
TACAAGTCATCTCCATTTGA+TGG + chr5.4:8052156-8052175 None:intergenic 35.0%
TAGGTAGAAGTAGCTAAAGA+AGG + chr5.4:8051908-8051927 None:intergenic 35.0%
TAGGTTACTTAGGTATGCTT+AGG + chr5.4:8050857-8050876 None:intergenic 35.0%
TAGTTCAGTAGGATCTAGAA+TGG + chr5.4:8052391-8052410 None:intergenic 35.0%
TATCTAGGTGACCTTTATTG+AGG + chr5.4:8053168-8053187 None:intergenic 35.0%
TCAACTAACCCTCAATAACT+AGG + chr5.4:8050107-8050126 None:intergenic 35.0%
TCAATAAAGGTCACCTAGAT+AGG - chr5.4:8053167-8053186 MS.gene015321:intron 35.0%
TGACCTTTATTGAGGTTTAC+TGG + chr5.4:8053160-8053179 None:intergenic 35.0%
TGTTTACATCTTCTCTCTAG+TGG - chr5.4:8051479-8051498 MS.gene015321:intron 35.0%
TTCCTAAGTGACTCTTATTG+GGG - chr5.4:8051507-8051526 MS.gene015321:intron 35.0%
TTGCAAGACATTTGATATGC+TGG + chr5.4:8048523-8048542 None:intergenic 35.0%
! ACAAATGGCTTCTCTTTTTG+TGG - chr5.4:8052619-8052638 MS.gene015321:intron 35.0%
! ACTTCAAAAAGCAGGTTTTG+TGG + chr5.4:8050775-8050794 None:intergenic 35.0%
! AGAGTTAGAAGTCTCTAAAG+AGG - chr5.4:8047954-8047973 MS.gene015321:CDS 35.0%
! AGTTCAGTAGGATCTAGAAT+GGG + chr5.4:8052390-8052409 None:intergenic 35.0%
! ATGTTAACCATCCCCTTTTA+AGG - chr5.4:8049299-8049318 MS.gene015321:CDS 35.0%
! CTGAGGTGTTTATGTATGTA+GGG - chr5.4:8052978-8052997 MS.gene015321:CDS 35.0%
! GCACTGATATTGTTTCTTGT+TGG - chr5.4:8052033-8052052 MS.gene015321:intron 35.0%
! TCAGAAGAATTGACTCTAGA+TGG - chr5.4:8048247-8048266 MS.gene015321:CDS 35.0%
! TCTGAGGTGTTTATGTATGT+AGG - chr5.4:8052977-8052996 MS.gene015321:CDS 35.0%
! TGGAGATGACTTGTATAACA+TGG - chr5.4:8052161-8052180 MS.gene015321:intron 35.0%
! TGTTAACCATCCCCTTTTAA+GGG - chr5.4:8049300-8049319 MS.gene015321:CDS 35.0%
! TTTGTTGTGATGAAGGTTCT+TGG - chr5.4:8052436-8052455 MS.gene015321:intron 35.0%
!! AAAACATTCAAGTTGGGAGA+TGG - chr5.4:8051759-8051778 MS.gene015321:intron 35.0%
!! AAACATTCAAGTTGGGAGAT+GGG - chr5.4:8051760-8051779 MS.gene015321:intron 35.0%
!! ATTGGTATTGACCCTACAAA+AGG - chr5.4:8050022-8050041 MS.gene015321:intron 35.0%
!! CTGGACTAGTTGAATGTTAT+AGG - chr5.4:8052861-8052880 MS.gene015321:intron 35.0%
!! CTGGCTTTGATATATATGAC+AGG - chr5.4:8051657-8051676 MS.gene015321:intron 35.0%
!! GATGGAAGTGTTGATTTCAA+TGG - chr5.4:8048265-8048284 MS.gene015321:CDS 35.0%
!! TTCTACCTAGCTTTGAACTT+TGG - chr5.4:8051919-8051938 MS.gene015321:intron 35.0%
!!! ACAATTTTAAGGGTGCTTCA+TGG + chr5.4:8048045-8048064 None:intergenic 35.0%
!!! GTTTTGGAACGTTTTCCATT+TGG - chr5.4:8049046-8049065 MS.gene015321:CDS 35.0%
AACAATGTGAGCAAATGGAC+TGG - chr5.4:8051453-8051472 MS.gene015321:intron 40.0%
AACCGAATATTGCCACATTC+GGG - chr5.4:8051833-8051852 MS.gene015321:intron 40.0%
AATGGTTGTGATGGCTGATT+AGG - chr5.4:8050959-8050978 MS.gene015321:intron 40.0%
AATTGACCCACGTGATCATT+TGG + chr5.4:8049893-8049912 None:intergenic 40.0%
ACAAAAGGATCACGATAGCT+AGG - chr5.4:8050037-8050056 MS.gene015321:intron 40.0%
AGAAAAATCCTCCACACAGA+CGG - chr5.4:8052213-8052232 MS.gene015321:intron 40.0%
AGCTACTTACATAGTTGCCA+AGG + chr5.4:8053081-8053100 None:intergenic 40.0%
AGTTATGAAGATCTCTACGG+AGG - chr5.4:8053114-8053133 MS.gene015321:intron 40.0%
ATCCCTCAGTATGCACTTAT+AGG - chr5.4:8052950-8052969 MS.gene015321:CDS 40.0%
ATCCTCGAAATAGACGAGAA+TGG + chr5.4:8051962-8051981 None:intergenic 40.0%
ATGATATAACCCACTTGCGT+TGG - chr5.4:8050379-8050398 MS.gene015321:intron 40.0%
ATTATGGTGCAGAGCCAAAT+TGG + chr5.4:8052581-8052600 None:intergenic 40.0%
ATTTCGAGGATGAAGGAATG+TGG - chr5.4:8051971-8051990 MS.gene015321:intron 40.0%
CAACCGAATATTGCCACATT+CGG - chr5.4:8051832-8051851 MS.gene015321:intron 40.0%
CATGTAACCAAATGATCACG+TGG - chr5.4:8049883-8049902 MS.gene015321:CDS 40.0%
CCACTTTGCACATGCAATAT+AGG + chr5.4:8053236-8053255 None:intergenic 40.0%
CCAGATGGCTTAAAGAGTTT+CGG - chr5.4:8053028-8053047 MS.gene015321:CDS 40.0%
CCATCACAACCATTCTGTAA+AGG + chr5.4:8050953-8050972 None:intergenic 40.0%
CCATTTGCTCACATTGTTAG+CGG + chr5.4:8051451-8051470 None:intergenic 40.0%
CCTATATTGCATGTGCAAAG+TGG - chr5.4:8053233-8053252 MS.gene015321:intron 40.0%
CCTTTACAGAATGGTTGTGA+TGG - chr5.4:8050950-8050969 MS.gene015321:intron 40.0%
CGAATTCTCGATCCATTTGT+GGG - chr5.4:8052749-8052768 MS.gene015321:intron 40.0%
CTCAACAAAAGACAAGAGAC+CGG - chr5.4:8049724-8049743 MS.gene015321:CDS 40.0%
CTCCTATAAGTGCATACTGA+GGG + chr5.4:8052955-8052974 None:intergenic 40.0%
GATTCATTCCCACAACCTTT+AGG + chr5.4:8051727-8051746 None:intergenic 40.0%
GCTACTTACATAGTTGCCAA+GGG + chr5.4:8053080-8053099 None:intergenic 40.0%
GCTCTGCACCATAATATACT+CGG - chr5.4:8052586-8052605 MS.gene015321:intron 40.0%
GTAATAGCAATGGTTTCAGC+TGG - chr5.4:8052842-8052861 MS.gene015321:intron 40.0%
GTGGATAAAGTAGAGTTAGC+TGG + chr5.4:8049143-8049162 None:intergenic 40.0%
GTTTAAGCATGTGAATTCGG+TGG + chr5.4:8049162-8049181 None:intergenic 40.0%
TAACCCACTTAAATTGGCAC+CGG + chr5.4:8050468-8050487 None:intergenic 40.0%
TAAGAGCCAAATCTGGAAGA+TGG - chr5.4:8048299-8048318 MS.gene015321:CDS 40.0%
TACATAGTTGCCAAGGGAAA+TGG + chr5.4:8053074-8053093 None:intergenic 40.0%
TACTGAGACTCCTTCCAATT+TGG - chr5.4:8052564-8052583 MS.gene015321:intron 40.0%
TATTGAATCCCGGGAATTTG+AGG - chr5.4:8048731-8048750 MS.gene015321:CDS 40.0%
TCAACAAAAGACAAGAGACC+GGG - chr5.4:8049725-8049744 MS.gene015321:CDS 40.0%
TCGAATTCTCGATCCATTTG+TGG - chr5.4:8052748-8052767 MS.gene015321:intron 40.0%
TCGATCTATCTCATTGCCTT+GGG - chr5.4:8051796-8051815 MS.gene015321:intron 40.0%
TTCAATGCTCAAACACCAGA+TGG - chr5.4:8053013-8053032 MS.gene015321:CDS 40.0%
TTCCCCAATAAGAGTCACTT+AGG + chr5.4:8051512-8051531 None:intergenic 40.0%
TTGATCAGTGAACCAATGTC+TGG - chr5.4:8051347-8051366 MS.gene015321:intron 40.0%
TTGTGTGTGCATATGTATGG+TGG - chr5.4:8050911-8050930 MS.gene015321:intron 40.0%
TTGTTGCATGCAAACTTGGA+AGG - chr5.4:8049102-8049121 MS.gene015321:CDS 40.0%
TTTCGAGGATGAAGGAATGT+GGG - chr5.4:8051972-8051991 MS.gene015321:intron 40.0%
! AAGATTTTGCACTACTTGGG+TGG - chr5.4:8049836-8049855 MS.gene015321:CDS 40.0%
! AGCTATCGTGATCCTTTTGT+AGG + chr5.4:8050037-8050056 None:intergenic 40.0%
! GAAGGTGTAGATAAGCATGA+TGG - chr5.4:8051256-8051275 MS.gene015321:intron 40.0%
! GAGGATTTTTCTGTTCGCAT+CGG + chr5.4:8052205-8052224 None:intergenic 40.0%
! GCTATCGTGATCCTTTTGTA+GGG + chr5.4:8050036-8050055 None:intergenic 40.0%
! TGGTACAAGAGTATACAGCT+GGG - chr5.4:8053253-8053272 MS.gene015321:intron 40.0%
!! AACATTCAAGTTGGGAGATG+GGG - chr5.4:8051761-8051780 MS.gene015321:intron 40.0%
!! AGCTTTGTTGCATGCAAACT+TGG - chr5.4:8049098-8049117 MS.gene015321:CDS 40.0%
!! ATTTGGCTCTTATTGCAGGA+CGG + chr5.4:8048291-8048310 None:intergenic 40.0%
!!! TGTGTGTGAGTTTTGTTACG+AGG + chr5.4:8048438-8048457 None:intergenic 40.0%
AAAGTAGAGTTAGCTGGCAC+TGG + chr5.4:8049137-8049156 None:intergenic 45.0%
AAATCTGGAAGATGGTCAGC+TGG - chr5.4:8048307-8048326 MS.gene015321:CDS 45.0%
AACCCACTTAAATTGGCACC+GGG + chr5.4:8050467-8050486 None:intergenic 45.0%
AAGTCCTTGTTGCTGCATCA+AGG - chr5.4:8052112-8052131 MS.gene015321:intron 45.0%
ACCGAATATTGCCACATTCG+GGG - chr5.4:8051834-8051853 MS.gene015321:intron 45.0%
ACCTAGTGGTATTCCTGACA+AGG - chr5.4:8051400-8051419 MS.gene015321:intron 45.0%
ACTTACGGAGCTTCAGAGAA+TGG - chr5.4:8052799-8052818 MS.gene015321:intron 45.0%
AGCTGACCATCTTCCAGATT+TGG + chr5.4:8048308-8048327 None:intergenic 45.0%
ATCGATCCTAAGACCTCAAG+AGG + chr5.4:8050440-8050459 None:intergenic 45.0%
CACCATTCTCGTCTATTTCG+AGG - chr5.4:8051957-8051976 MS.gene015321:intron 45.0%
CCGAAACTCTTTAAGCCATC+TGG + chr5.4:8053031-8053050 None:intergenic 45.0%
CCGCTAACAATGTGAGCAAA+TGG - chr5.4:8051448-8051467 MS.gene015321:intron 45.0%
CCTAGTGGTATTCCTGACAA+GGG - chr5.4:8051401-8051420 MS.gene015321:intron 45.0%
CCTGCAATAAGAGCCAAATC+TGG - chr5.4:8048292-8048311 MS.gene015321:CDS 45.0%
CGAATGTGGCAATATTCGGT+TGG + chr5.4:8051834-8051853 None:intergenic 45.0%
CGAGTACTTTGAGCATCTTC+TGG - chr5.4:8052924-8052943 MS.gene015321:CDS 45.0%
CGATCTATCTCATTGCCTTG+GGG - chr5.4:8051797-8051816 MS.gene015321:intron 45.0%
CTCGATCTATCTCATTGCCT+TGG - chr5.4:8051795-8051814 MS.gene015321:intron 45.0%
CTCGTCTATTTCGAGGATGA+AGG - chr5.4:8051964-8051983 MS.gene015321:intron 45.0%
CTGCACCATAATATACTCGG+TGG - chr5.4:8052589-8052608 MS.gene015321:intron 45.0%
CTGTTTCATGCTTGCAGTCT+CGG + chr5.4:8052302-8052321 None:intergenic 45.0%
CTTACGGAGCTTCAGAGAAT+GGG - chr5.4:8052800-8052819 MS.gene015321:intron 45.0%
CTTTCCTTGATGCAGCAACA+AGG + chr5.4:8052119-8052138 None:intergenic 45.0%
GAAAAATCCTCCACACAGAC+GGG - chr5.4:8052214-8052233 MS.gene015321:intron 45.0%
GAAGGAGGGTCACAATAAAG+TGG - chr5.4:8051882-8051901 MS.gene015321:intron 45.0%
GAGGTACGATGACAAGGATA+AGG + chr5.4:8051692-8051711 None:intergenic 45.0%
GCACTTGGCATAAAGCATGA+AGG - chr5.4:8051238-8051257 MS.gene015321:intron 45.0%
GCTCCTATAAGTGCATACTG+AGG + chr5.4:8052956-8052975 None:intergenic 45.0%
GGCTTGAAATGTCGGTACTT+TGG + chr5.4:8052063-8052082 None:intergenic 45.0%
GTATACATCTGCTCTGCACT+TGG - chr5.4:8051223-8051242 MS.gene015321:intron 45.0%
TAAGTCCATCGATGTCAAGG+CGG + chr5.4:8053209-8053228 None:intergenic 45.0%
TATCTCATTGCCTTGGGGAA+TGG - chr5.4:8051802-8051821 MS.gene015321:intron 45.0%
TCAAAGCAAGACATGCTAGC+TGG + chr5.4:8052692-8052711 None:intergenic 45.0%
TGCACTTATAGGAGCTTCTG+AGG - chr5.4:8052961-8052980 MS.gene015321:CDS 45.0%
TGCATGACATCCATTTCCCT+TGG - chr5.4:8053061-8053080 MS.gene015321:intron 45.0%
TTGATGCAGCAACAAGGACT+TGG + chr5.4:8052113-8052132 None:intergenic 45.0%
! CAAGAAGAGGTACGATGACA+AGG + chr5.4:8051698-8051717 None:intergenic 45.0%
! CGGTCTCTTGTCTTTTGTTG+AGG + chr5.4:8049726-8049745 None:intergenic 45.0%
! CTCGGTGGTTTTCACACAAA+TGG - chr5.4:8052604-8052623 MS.gene015321:intron 45.0%
! CTGGCAACTCTGGCATTTTT+CGG - chr5.4:8051366-8051385 MS.gene015321:intron 45.0%
! GATTTTTCTGTTCGCATCGG+TGG + chr5.4:8052202-8052221 None:intergenic 45.0%
! GCTTCTCTTTTTGTGGAGCA+AGG - chr5.4:8052626-8052645 MS.gene015321:intron 45.0%
! GTGGTACAAGAGTATACAGC+TGG - chr5.4:8053252-8053271 MS.gene015321:intron 45.0%
! TGATAGCTGGAGAAAGGTGT+TGG - chr5.4:8048811-8048830 MS.gene015321:intron 45.0%
! TGGCAACTCTGGCATTTTTC+GGG - chr5.4:8051367-8051386 MS.gene015321:intron 45.0%
!! AACCATCCCCTTTTAAGGGA+AGG - chr5.4:8049304-8049323 MS.gene015321:CDS 45.0%
!! CCAGATTTGGCTCTTATTGC+AGG + chr5.4:8048295-8048314 None:intergenic 45.0%
!! GAGAAAGGTGTTGGTGTTGA+TGG - chr5.4:8048820-8048839 MS.gene015321:intron 45.0%
!!! ACTCTGGCATTTTTCGGGAT+TGG - chr5.4:8051372-8051391 MS.gene015321:intron 45.0%
!!! AAAATTTTAATAAAAAGAAA+GGG - chr5.4:8049656-8049675 MS.gene015321:intron 5.0%
!!! TTATTTTATAATATATTGTT+AGG + chr5.4:8050876-8050895 None:intergenic 5.0%
AAACTGATCAGCCCCGAATG+TGG + chr5.4:8051848-8051867 None:intergenic 50.0%
AACAAGGACTTGGCAGAACC+TGG + chr5.4:8052103-8052122 None:intergenic 50.0%
AAGCAAGACATGCTAGCTGG+TGG + chr5.4:8052689-8052708 None:intergenic 50.0%
AAGTACTCGAGCCTTTGCAG+TGG + chr5.4:8052913-8052932 None:intergenic 50.0%
ACCCACTTAAATTGGCACCG+GGG + chr5.4:8050466-8050485 None:intergenic 50.0%
AGACAAGAGACCGGGAACTA+TGG - chr5.4:8049733-8049752 MS.gene015321:CDS 50.0%
AGTGGTATTCCTGACAAGGG+TGG - chr5.4:8051404-8051423 MS.gene015321:intron 50.0%
ATGCCAGAGTTGCCAGACAT+TGG + chr5.4:8051362-8051381 None:intergenic 50.0%
CCCTTGTCAGGAATACCACT+AGG + chr5.4:8051404-8051423 None:intergenic 50.0%
CGCAAAGAGAATGATGAGCC+AGG - chr5.4:8053283-8053302 MS.gene015321:intron 50.0%
CTCCGTAAGTCCCTTAGAGT+CGG + chr5.4:8052789-8052808 None:intergenic 50.0%
CTTACTTGAACCCGTCTGTG+TGG + chr5.4:8052227-8052246 None:intergenic 50.0%
GAACCAATGTCTGGCAACTC+TGG - chr5.4:8051356-8051375 MS.gene015321:intron 50.0%
GAGCTTCAGAGAATGGGAGT+TGG - chr5.4:8052806-8052825 MS.gene015321:intron 50.0%
GATGAAGGAATGTGGGCTCT+TGG - chr5.4:8051979-8051998 MS.gene015321:intron 50.0%
GCCCCGAATGTGGCAATATT+CGG + chr5.4:8051838-8051857 None:intergenic 50.0%
GTATTCCTGACAAGGGTGGT+AGG - chr5.4:8051408-8051427 MS.gene015321:intron 50.0%
GTCCTTCCCTTAAAAGGGGA+TGG + chr5.4:8049309-8049328 None:intergenic 50.0%
TACCGACATTTCAAGCCCAG+TGG - chr5.4:8052066-8052085 MS.gene015321:intron 50.0%
TGCCACTGGGCTTGAAATGT+CGG + chr5.4:8052071-8052090 None:intergenic 50.0%
TGGTGCAGAGCCAAATTGGA+AGG + chr5.4:8052577-8052596 None:intergenic 50.0%
TGTGCTCCTCTTGAGGTCTT+AGG - chr5.4:8050431-8050450 MS.gene015321:intron 50.0%
TTACAGGACAGAGACGCCAT+GGG + chr5.4:8052520-8052539 None:intergenic 50.0%
TTTGTCCTACCACCCTTGTC+AGG + chr5.4:8051416-8051435 None:intergenic 50.0%
! GTCCGACTCTAAGGGACTTA+CGG - chr5.4:8052784-8052803 MS.gene015321:intron 50.0%
! GTCTTAGGATCGATTCTCCC+CGG - chr5.4:8050446-8050465 MS.gene015321:intron 50.0%
! TCCCCGGTGCCAATTTAAGT+GGG - chr5.4:8050462-8050481 MS.gene015321:intron 50.0%
! TTGGTAACCTCCATTCCCCA+AGG + chr5.4:8051815-8051834 None:intergenic 50.0%
!! GTGGTATTGGTTTGGGACCT+GGG - chr5.4:8050406-8050425 MS.gene015321:intron 50.0%
!! TGGCCTGGTGGTATTGGTTT+GGG - chr5.4:8050399-8050418 MS.gene015321:intron 50.0%
!! TGTTGGTGTTGATGGCGTAG+AGG - chr5.4:8048828-8048847 MS.gene015321:intron 50.0%
!! TTGGCCTGGTGGTATTGGTT+TGG - chr5.4:8050398-8050417 MS.gene015321:intron 50.0%
ACTTGAACCCGTCTGTGTGG+AGG + chr5.4:8052224-8052243 None:intergenic 55.0%
ACTTGGCAGAACCTGGCAAG+AGG + chr5.4:8052096-8052115 None:intergenic 55.0%
AGGTTTACTGGGATCCACCC+CGG + chr5.4:8053148-8053167 None:intergenic 55.0%
CGGGATTGGAGTGAACCTAG+TGG - chr5.4:8051386-8051405 MS.gene015321:intron 55.0%
CTCATTGCCTTGGGGAATGG+AGG - chr5.4:8051805-8051824 MS.gene015321:intron 55.0%
CTCTACGGAGGATCACATGC+CGG - chr5.4:8053126-8053145 MS.gene015321:intron 55.0%
CTTACAGGACAGAGACGCCA+TGG + chr5.4:8052521-8052540 None:intergenic 55.0%
CTTAGCCGCCTTGACATCGA+TGG - chr5.4:8053201-8053220 MS.gene015321:intron 55.0%
CTTGGCAGAACCTGGCAAGA+GGG + chr5.4:8052095-8052114 None:intergenic 55.0%
GAATGTGGGCTCTTGGCTTC+TGG - chr5.4:8051986-8052005 MS.gene015321:intron 55.0%
GGTCCCAAACCAATACCACC+AGG + chr5.4:8050405-8050424 None:intergenic 55.0%
TACTCGAGCCTTTGCAGTGG+CGG + chr5.4:8052910-8052929 None:intergenic 55.0%
TCGATGTCAAGGCGGCTAAG+AGG + chr5.4:8053201-8053220 None:intergenic 55.0%
TCTACGGAGGATCACATGCC+GGG - chr5.4:8053127-8053146 MS.gene015321:intron 55.0%
! ATAACCCACTTGCGTTGGCC+TGG - chr5.4:8050384-8050403 MS.gene015321:intron 55.0%
! CTCCCCGGTGCCAATTTAAG+TGG - chr5.4:8050461-8050480 MS.gene015321:intron 55.0%
! TTGCGTTGGCCTGGTGGTAT+TGG - chr5.4:8050393-8050412 MS.gene015321:intron 55.0%
!! GGTGGTATTGGTTTGGGACC+TGG - chr5.4:8050405-8050424 MS.gene015321:intron 55.0%
!! GTTTGACGAGGAGCACTCGA+AGG - chr5.4:8051864-8051883 MS.gene015321:intron 55.0%
ACCACCAGGCCAACGCAAGT+GGG + chr5.4:8050391-8050410 None:intergenic 60.0%
AGGACAGAGACGCCATGGGT+TGG + chr5.4:8052516-8052535 None:intergenic 60.0%
CAAGACTGCCGCCACTGCAA+AGG - chr5.4:8052899-8052918 MS.gene015321:intron 60.0%
CGGGGCTGATCAGTTTGACG+AGG - chr5.4:8051852-8051871 MS.gene015321:intron 60.0%
CTACGGAGGATCACATGCCG+GGG - chr5.4:8053128-8053147 MS.gene015321:intron 60.0%
CTGGCAAGAGGGTTGCCACT+GGG + chr5.4:8052084-8052103 None:intergenic 60.0%
CTTTGCAGTGGCGGCAGTCT+TGG + chr5.4:8052901-8052920 None:intergenic 60.0%
GGTTGGAACAGGCGCCTTTC+TGG + chr5.4:8052499-8052518 None:intergenic 60.0%
TACCACCAGGCCAACGCAAG+TGG + chr5.4:8050392-8050411 None:intergenic 60.0%
! AAGGCGCCTGTTCCAACCCA+TGG - chr5.4:8052501-8052520 MS.gene015321:intron 60.0%
! CTCAAGAGGAGCACACTCCC+AGG + chr5.4:8050426-8050445 None:intergenic 60.0%
! CTGGGAGTGTGCTCCTCTTG+AGG - chr5.4:8050424-8050443 MS.gene015321:intron 60.0%
! CTTGGCTTCTGGCTGTCTGC+AGG - chr5.4:8051997-8052016 MS.gene015321:intron 60.0%
!! GACGAGGAGCACTCGAAGGA+GGG - chr5.4:8051868-8051887 MS.gene015321:intron 60.0%
!! GAGACGCCATGGGTTGGAAC+AGG + chr5.4:8052510-8052529 None:intergenic 60.0%
!! TGACGAGGAGCACTCGAAGG+AGG - chr5.4:8051867-8051886 MS.gene015321:intron 60.0%
CCAGTGGCAACCCTCTTGCC+AGG - chr5.4:8052082-8052101 MS.gene015321:intron 65.0%
CCTGGCAAGAGGGTTGCCAC+TGG + chr5.4:8052085-8052104 None:intergenic 65.0%
! ACCCACTTGCGTTGGCCTGG+TGG - chr5.4:8050387-8050406 MS.gene015321:intron 65.0%
CGGAGGATCACATGCCGGGG+TGG - chr5.4:8053131-8053150 MS.gene015321:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 8047943 8053321 8047943 ID=MS.gene015321
chr5.4 mRNA 8047943 8053321 8047943 ID=MS.gene015321.t1;Parent=MS.gene015321
chr5.4 exon 8053289 8053321 8053289 ID=MS.gene015321.t1.exon1;Parent=MS.gene015321.t1
chr5.4 CDS 8053289 8053321 8053289 ID=cds.MS.gene015321.t1;Parent=MS.gene015321.t1
chr5.4 exon 8052921 8053053 8052921 ID=MS.gene015321.t1.exon2;Parent=MS.gene015321.t1
chr5.4 CDS 8052921 8053053 8052921 ID=cds.MS.gene015321.t1;Parent=MS.gene015321.t1
chr5.4 exon 8049692 8049909 8049692 ID=MS.gene015321.t1.exon3;Parent=MS.gene015321.t1
chr5.4 CDS 8049692 8049909 8049692 ID=cds.MS.gene015321.t1;Parent=MS.gene015321.t1
chr5.4 exon 8049023 8049585 8049023 ID=MS.gene015321.t1.exon4;Parent=MS.gene015321.t1
chr5.4 CDS 8049023 8049585 8049023 ID=cds.MS.gene015321.t1;Parent=MS.gene015321.t1
chr5.4 exon 8047943 8048813 8047943 ID=MS.gene015321.t1.exon5;Parent=MS.gene015321.t1
chr5.4 CDS 8047943 8048813 8047943 ID=cds.MS.gene015321.t1;Parent=MS.gene015321.t1
Gene Sequence

>MS.gene015321

ATGTCTTGCTTAGAGTTAGAAGTCTCTAAAGAGGTTAGTAGAAATAAAATAAAAATTACATTTCCAAATATGTACATTATTCCTCTTTAATTCTTAAAACCATGAAGCACCCTTAAAATTGTTTTTGACATACTTTGTTTGATCACTAAATACATATTTTGAGCATGCATATTAGTCTCATCAACAATGAATGTAAATTATGTAATAAATATATAAACACTAAAAATGTATATTTTATTTTATTTTTTGTTTTCAAAACTCTCTGCAGAACAAGTTCAAAGAAGAAACAGATTCTGAAACAGAATCAGAAGAATTGACTCTAGATGGAAGTGTTGATTTCAATGGCCGTCCTGCAATAAGAGCCAAATCTGGAAGATGGTCAGCTGGAACAATTATACTCTGTAAGCTCTACAAACATAAATTGCAAAAATTTTATTTTACCATATTAATTTTATTTTATTATATACTTTGAATTCTTTTGTTATCACATAACCTCGTAACAAAACTCACACACACTAAACGCAGAGAAGCTGAACGTTGTTGATTAGAATTTGCGCTTCTACATATCAAATGTACTCCAGCATATCAAATGTCTTGCAACTTTTATCATTTTAACTGCACTTACTCGGACTATTTAAAAAAAATAATACTTGTTTTCACATAATGCAAATCATGCATATATATAACAGTACATATTCCATACTTTTTCTTACGAAAACAATTAAAATTTCATCAATAAGAGATATACATTAGTACTATAAGTTGTCAATGATCTTGTTCTTAAAGCTTATTGAATCCCGGGAATTTGAGGAAAAAAAATACACATGCAAATACATATATGTATATGATTGCGTATACGTATAGTTTATGATAGCTGGAGAAAGGTGTTGGTGTTGATGGCGTAGAGGTTTGAAAAACCTTGTTAGTTGAAAAAAAACAAAAAAGGTTAATTATAAATTCATGTGTTGTGTTCATATTGTTTGCATGTAATTTTAGATAGCTTATCATAAGGAATAGTAAATGAAAGGTGAAGTTACTTTTTGTGTTGTGTTGTTGCAACATTTTCAAGCTTATCAGTTTTATGTATAAAAGGAAAAACGAAAGTTTTGGAACGTTTTCCATTTGGCATACAAAATTCAAAGTAACATTTTTGTCAGCTTTGTTGCATGCAAACTTGGAAGGAAGAGTATGCCAGTGCCAGCTAACTCTACTTTATCCACCGAATTCACATGCTTAAACTTGTTGCTTCACACTTACTTATTTGGGGAATATAAGAAAAAATAATGTTAAAGAATTATTGTGGGAGTAAATAAATATTTGAATATATAATAAAATAAGTAAAAAAAAAAAAAAAAGATGTTAACCATCCCCTTTTAAGGGAAGGACATTATGATCTAAAGTTTGACTGAAGGTAAATAATATCTAATCAAAATTGTTTTACCTAAACAATTCGTTTTTTGGTGAATCTCATTAACCTCTTGAGTTTAATTGTATACAAATAATTTTTGATATATTGTATATATATAAAAAGCTTTACATTCTTAATAAATTACAACTATTTTTTTAAGGAAACAAATTACAACTTCATTTTTTTGAAGGAAACAAATTACAACTAATTATATATACTTAATTTTATAAGTAGTTGTATGTGACTTTAGATGTATATATTTATGAGGATTATGATCGATTTACTTTTTTATGGTGTAAAAAAGGAAAATTTTAATAAAAAGAAAGGGGAAAGAGTTTGTGAATATTCATAGTCATAGAGGCTTTTCGCTGTCCTCAACAAAAGACAAGAGACCGGGAACTATGGTAACTAAAAAAAAGACAAAATGCAGAAAAGAAGCATGGAATTCATAGAAATACGTTTATGACAGACACGTAACCAGTGATAAGATTTTGCACTACTTGGGTGGATGACATGTGTCATTGACAATAGACATGTAACCAAATGATCACGTGGGTCAATTAAAGTTGATGTATTTGGTTTAAAATGCAGACCAAATACAATAAATTGACTCATTTATCTCCTATAAAATTACTAGAATGAGTAATAATTAGCCCAAAATGGAAGAGTAAATTGGTATTGACCCTACAAAAGGATCACGATAGCTAGGTATACTTTTTTTGACAAGAGGTTGGTATATATATTTACTAACTACCTAGTTATTGAGGGTTAGTTGATTAATATGCATGCTATGGTTTATTCTGAGTATGGAAAATTGGTATAGATCACATCTATAATCTTCTTTAGGTTGTTTCGTGTAAGTTAGTTTGGTGCTGAGAGAAAGAATGTGAACCAAGTAATATACTTCCATGCAAATGTATATTACGTGATTGATATCTAGAAAATGTTTTTGCAAAATAAATATCTATTTTTTGTGTGTGCAAAATAATAAAATAAAATATCTTTTATTTACATAAAATAATATTCAAATGATATAACCCACTTGCGTTGGCCTGGTGGTATTGGTTTGGGACCTGGGAGTGTGCTCCTCTTGAGGTCTTAGGATCGATTCTCCCCGGTGCCAATTTAAGTGGGTTAATTTAACTTCTTCAAAAAAAAAATCAAATGATATAATGTATGCTTTGAGTTATATAGAATAAATTTTCATTTATAAATTTGTATGCTTTGAGTTATATAGAATAAATTTTCATTTATAAATTTTCTCTTATATACTGGTACTCAAAAAGAATGGACCATATACAAAAGTGTCTTCAAGCTACATGATATGAAAGTAATATATAAAATTCATGGCATGAAAATCAACAATCCTTTTGGAAAAAAGTAGTTAAAATAATGAATTAAATTTAAAGAATGATTTCTTTCCACAAAACCTGCTTTTTGAAGTGTTATCACGCCTCTGAAACCATTAATAAGATGGTGTTTATAGTGCTTTTATAAAGGAAACCTAAGCATACCTAAGTAACCTAACAATATATTATAAAATAAACTTGTTGCAATATCTTGTGTGTGCATATGTATGGTGGTGACAAAATAGACAACCCTTTACAGAATGGTTGTGATGGCTGATTAGGATCTCGACAAATTTGACTTAGCTAAGCCATGCATATAGATAACATAATATGAATATTATCAATATTGTTTTTTCTTTTCAAATTTAGTAAATTATCTTAAGTGAATTGTGCTGCCTTGTACAAAATTATTTCAGTCTTCAAGAAGAGTCTAATACAGATGCTGAAAAAACAGAATCCAAAACAACATAAGACAGAAAAAAAAGAACAAAAACACATAACAAAACAGAACATCAATTCAGCAGTATACATCTGCTCTGCACTTGGCATAAAGCATGAAGGTGTAGATAAGCATGATGGTATATTTAATTCACTATAATATTAAGAACATGGTTGCTAATGCTGTTTGTTTTGTTGTTCTGATTGTATTGATCAGTGAACCAATGTCTGGCAACTCTGGCATTTTTCGGGATTGGAGTGAACCTAGTGGTATTCCTGACAAGGGTGGTAGGACAAAATAACGCAGAAGCCGCTAACAATGTGAGCAAATGGACTGGAACTGTTTACATCTTCTCTCTAGTGGGAGCTTTCCTAAGTGACTCTTATTGGGGAAGATATAAAACATGTGCTGTCTTTCAGGTCATTTTTGTAATTGTAAGTAATGACTCTCAGTTTCATCTCCAAACACTCTTTTATTTTTAGCTGCTACATTATTTCATTGACTAATCAATAAATCTTCTGGCTTTGATATATATGACAGGGTCTAATGTCCTTATCCTTGTCATCGTACCTCTTCTTGATTAAACCTAAAGGTTGTGGGAATGAATCAATTCAATGTGGAAAACATTCAAGTTGGGAGATGGGGATGTTCTATCTCTCGATCTATCTCATTGCCTTGGGGAATGGAGGTTACCAACCGAATATTGCCACATTCGGGGCTGATCAGTTTGACGAGGAGCACTCGAAGGAGGGTCACAATAAAGTGGCCTTCTTTAGCTACTTCTACCTAGCTTTGAACTTTGGGCAACTCTTTTCAAACACCATTCTCGTCTATTTCGAGGATGAAGGAATGTGGGCTCTTGGCTTCTGGCTGTCTGCAGGCTGTGCCTTTATCGCACTGATATTGTTTCTTGTTGGCACACCAAAGTACCGACATTTCAAGCCCAGTGGCAACCCTCTTGCCAGGTTCTGCCAAGTCCTTGTTGCTGCATCAAGGAAAGTGAAAGTTGAAATGCCATCAAATGGAGATGACTTGTATAACATGGATACAAAGGAGTCTTCCACCGATGCGAACAGAAAAATCCTCCACACAGACGGGTTCAAGTAAGTGATAGAAGCTACCTTCAGCTGAAACCATAATACTTTCTTATGTGTGTATAGCCGAGACTGCAAGCATGAAACAGTTCTCCAATATTATTTAGCTAATTTTGGTACATTGTGAACAAAATAACTTTTTTCAGCATTATTGCCCATTCTAGATCCTACTGAACTAAAATGATTTGATAAATTTTCCATTTTTTGTTGTGATGAAGGTTCTTGGATAGAGCAGCGATTATATCTTCAAGAGATCAAGATAACCAGAAAGGCGCCTGTTCCAACCCATGGCGTCTCTGTCCTGTAAGTCAAGTTGAAGAAGTGAAGTGCATACTGAGACTCCTTCCAATTTGGCTCTGCACCATAATATACTCGGTGGTTTTCACACAAATGGCTTCTCTTTTTGTGGAGCAAGGCGATGCCATGAAAACCACTGTTTACAATTTCAGAGTACCACCAGCTAGCATGTCTTGCTTTGATATCATCAGCGTAGCTGTCTTCATTTTCTTCTATCGTCGAATTCTCGATCCATTTGTGGGAAAACTTAAAAAGTCCGACTCTAAGGGACTTACGGAGCTTCAGAGAATGGGAGTTGGACTTGTTATAGCTGTAATAGCAATGGTTTCAGCTGGACTAGTTGAATGTTATAGGCTTAAGCATGCAGACCAAGACTGCCGCCACTGCAAAGGCTCGAGTACTTTGAGCATCTTCTGGCAAATCCCTCAGTATGCACTTATAGGAGCTTCTGAGGTGTTTATGTATGTAGGGCAGTTAGAGTTCTTCAATGCTCAAACACCAGATGGCTTAAAGAGTTTCGGAAGTGCACTTTGCATGACATCCATTTCCCTTGGCAACTATGTAAGTAGCTTACTGGTCAGTGTAGTTATGAAGATCTCTACGGAGGATCACATGCCGGGGTGGATCCCAGTAAACCTCAATAAAGGTCACCTAGATAGGTTTTACTTCCTCTTAGCCGCCTTGACATCGATGGACTTAATTGCCTATATTGCATGTGCAAAGTGGTACAAGAGTATACAGCTGGGCGAGAAACGCAAAGAGAATGATGAGCCAGGTAGCTTCAAAGTCTAA
Protein sequence

>MS.gene015321.t1

MSCLELEVSKENKFKEETDSETESEELTLDGSVDFNGRPAIRAKSGRWSAGTIILLNQCLATLAFFGIGVNLVVFLTRVVGQNNAEAANNVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAVFQVIFVIGLMSLSLSSYLFLIKPKGCGNESIQCGKHSSWEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGHNKVAFFSYFYLALNFGQLFSNTILVYFEDEGMWALGFWLSAGCAFIALILFLVGTPKYRHFKPSGNPLARFCQVLVAASRKVKVEMPSNGDDLYNMDTKESSTDANRKILHTDGFKFLDRAAIISSRDQDNQKGACSNPWRLCPVSQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGDAMKTTVYNFRVPPASMSCFDIISVAVFIFFYRRILDPFVGKLKKSDSKGLTELQRMGVGLVIAVIAMVSAGLVECYRLKHADQDCRHCKGSSTLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSSLLVSVVMKISTEDHMPGWIPVNLNKGHLDRFYFLLAALTSMDLIAYIACAKWYKSIQLGEKRKENDEPGSFKV