Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80997.t1 | XP_003621048.1 | 99.7 | 342 | 1 | 0 | 1 | 342 | 1 | 342 | 9.10E-194 | 686 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80997.t1 | Q9LYR6 | 78.6 | 341 | 72 | 1 | 1 | 340 | 1 | 341 | 5.1e-153 | 542.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80997.t1 | G7KXR0 | 99.7 | 342 | 1 | 0 | 1 | 342 | 1 | 342 | 6.5e-194 | 686.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049260 | MS.gene80997 | 0.807411 | 5.12E-50 | -1.69E-46 |
MS.gene049297 | MS.gene80997 | 0.814519 | 1.48E-51 | -1.69E-46 |
MS.gene049346 | MS.gene80997 | 0.809045 | 2.30E-50 | -1.69E-46 |
MS.gene049758 | MS.gene80997 | 0.864899 | 8.72E-65 | -1.69E-46 |
MS.gene050099 | MS.gene80997 | 0.846195 | 2.53E-59 | -1.69E-46 |
MS.gene050128 | MS.gene80997 | 0.827918 | 1.20E-54 | -1.69E-46 |
MS.gene050301 | MS.gene80997 | 0.847294 | 1.27E-59 | -1.69E-46 |
MS.gene050397 | MS.gene80997 | 0.805441 | 1.33E-49 | -1.69E-46 |
MS.gene050762 | MS.gene80997 | 0.803921 | 2.77E-49 | -1.69E-46 |
MS.gene050763 | MS.gene80997 | 0.807071 | 6.05E-50 | -1.69E-46 |
MS.gene05101 | MS.gene80997 | 0.825968 | 3.51E-54 | -1.69E-46 |
MS.gene051471 | MS.gene80997 | 0.811127 | 8.18E-51 | -1.69E-46 |
MS.gene051662 | MS.gene80997 | 0.828517 | 8.60E-55 | -1.69E-46 |
MS.gene051663 | MS.gene80997 | 0.849992 | 2.26E-60 | -1.69E-46 |
MS.gene051789 | MS.gene80997 | 0.813747 | 2.19E-51 | -1.69E-46 |
MS.gene051860 | MS.gene80997 | 0.803674 | 3.11E-49 | -1.69E-46 |
MS.gene052078 | MS.gene80997 | 0.84532 | 4.37E-59 | -1.69E-46 |
MS.gene052178 | MS.gene80997 | 0.85257 | 4.23E-61 | -1.69E-46 |
MS.gene052287 | MS.gene80997 | 0.807566 | 4.75E-50 | -1.69E-46 |
MS.gene052326 | MS.gene80997 | 0.819494 | 1.13E-52 | -1.69E-46 |
MS.gene052340 | MS.gene80997 | 0.822417 | 2.40E-53 | -1.69E-46 |
MS.gene053209 | MS.gene80997 | 0.800431 | 1.45E-48 | -1.69E-46 |
MS.gene053557 | MS.gene80997 | 0.808976 | 2.38E-50 | -1.69E-46 |
MS.gene053836 | MS.gene80997 | 0.867912 | 9.64E-66 | -1.69E-46 |
MS.gene053928 | MS.gene80997 | 0.812886 | 3.38E-51 | -1.69E-46 |
MS.gene054011 | MS.gene80997 | 0.815647 | 8.31E-52 | -1.69E-46 |
MS.gene054012 | MS.gene80997 | 0.807097 | 5.97E-50 | -1.69E-46 |
MS.gene054013 | MS.gene80997 | 0.810997 | 8.73E-51 | -1.69E-46 |
MS.gene054184 | MS.gene80997 | 0.813708 | 2.23E-51 | -1.69E-46 |
MS.gene054185 | MS.gene80997 | 0.814056 | 1.87E-51 | -1.69E-46 |
MS.gene054214 | MS.gene80997 | 0.812106 | 5.01E-51 | -1.69E-46 |
MS.gene054473 | MS.gene80997 | 0.810084 | 1.37E-50 | -1.69E-46 |
MS.gene054942 | MS.gene80997 | 0.811703 | 6.13E-51 | -1.69E-46 |
MS.gene055133 | MS.gene80997 | 0.820692 | 6.00E-53 | -1.69E-46 |
MS.gene055207 | MS.gene80997 | 0.802141 | 6.46E-49 | -1.69E-46 |
MS.gene055277 | MS.gene80997 | 0.861738 | 8.31E-64 | -1.69E-46 |
MS.gene055390 | MS.gene80997 | 0.818818 | 1.61E-52 | -1.69E-46 |
MS.gene055422 | MS.gene80997 | 0.863813 | 1.90E-64 | -1.69E-46 |
MS.gene055428 | MS.gene80997 | 0.865425 | 5.96E-65 | -1.69E-46 |
MS.gene055604 | MS.gene80997 | 0.835573 | 1.55E-56 | -1.69E-46 |
MS.gene055712 | MS.gene80997 | 0.816858 | 4.45E-52 | -1.69E-46 |
MS.gene056069 | MS.gene80997 | -0.811835 | 5.74E-51 | -1.69E-46 |
MS.gene056191 | MS.gene80997 | 0.822709 | 2.05E-53 | -1.69E-46 |
MS.gene056314 | MS.gene80997 | 0.805466 | 1.32E-49 | -1.69E-46 |
MS.gene056612 | MS.gene80997 | 0.822057 | 2.90E-53 | -1.69E-46 |
MS.gene05702 | MS.gene80997 | 0.822362 | 2.47E-53 | -1.69E-46 |
MS.gene057121 | MS.gene80997 | 0.805454 | 1.32E-49 | -1.69E-46 |
MS.gene05733 | MS.gene80997 | 0.826887 | 2.12E-54 | -1.69E-46 |
MS.gene057393 | MS.gene80997 | 0.819452 | 1.15E-52 | -1.69E-46 |
MS.gene057439 | MS.gene80997 | 0.849897 | 2.41E-60 | -1.69E-46 |
MS.gene057754 | MS.gene80997 | 0.819018 | 1.45E-52 | -1.69E-46 |
MS.gene057796 | MS.gene80997 | 0.811973 | 5.36E-51 | -1.69E-46 |
MS.gene058002 | MS.gene80997 | 0.847686 | 9.88E-60 | -1.69E-46 |
MS.gene05811 | MS.gene80997 | 0.863213 | 2.92E-64 | -1.69E-46 |
MS.gene058660 | MS.gene80997 | 0.800099 | 1.69E-48 | -1.69E-46 |
MS.gene058749 | MS.gene80997 | 0.825285 | 5.09E-54 | -1.69E-46 |
MS.gene058833 | MS.gene80997 | 0.80313 | 4.04E-49 | -1.69E-46 |
MS.gene058845 | MS.gene80997 | 0.802896 | 4.51E-49 | -1.69E-46 |
MS.gene05907 | MS.gene80997 | 0.835553 | 1.57E-56 | -1.69E-46 |
MS.gene059228 | MS.gene80997 | 0.83439 | 3.08E-56 | -1.69E-46 |
MS.gene059518 | MS.gene80997 | 0.876293 | 1.57E-68 | -1.69E-46 |
MS.gene059597 | MS.gene80997 | 0.80305 | 4.19E-49 | -1.69E-46 |
MS.gene059692 | MS.gene80997 | 0.805966 | 1.03E-49 | -1.69E-46 |
MS.gene05984 | MS.gene80997 | 0.839594 | 1.44E-57 | -1.69E-46 |
MS.gene059894 | MS.gene80997 | 0.849591 | 2.93E-60 | -1.69E-46 |
MS.gene059974 | MS.gene80997 | 0.842108 | 3.16E-58 | -1.69E-46 |
MS.gene060005 | MS.gene80997 | 0.844645 | 6.65E-59 | -1.69E-46 |
MS.gene06037 | MS.gene80997 | 0.856171 | 3.85E-62 | -1.69E-46 |
MS.gene060476 | MS.gene80997 | 0.862617 | 4.47E-64 | -1.69E-46 |
MS.gene061049 | MS.gene80997 | 0.861487 | 9.91E-64 | -1.69E-46 |
MS.gene061113 | MS.gene80997 | 0.806785 | 6.95E-50 | -1.69E-46 |
MS.gene061265 | MS.gene80997 | 0.801866 | 7.36E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80997.t1 | MTR_7g006540 | 99.708 | 342 | 1 | 0 | 1 | 342 | 1 | 342 | 0.0 | 712 |
MS.gene80997.t1 | MTR_7g067010 | 42.138 | 318 | 170 | 7 | 38 | 354 | 1 | 305 | 2.81e-75 | 243 |
MS.gene80997.t1 | MTR_4g015080 | 42.617 | 298 | 159 | 6 | 44 | 341 | 17 | 302 | 1.12e-73 | 239 |
MS.gene80997.t1 | MTR_3g462710 | 44.643 | 280 | 146 | 3 | 63 | 342 | 24 | 294 | 1.57e-73 | 238 |
MS.gene80997.t1 | MTR_3g112470 | 39.726 | 292 | 168 | 3 | 51 | 342 | 12 | 295 | 2.23e-64 | 214 |
MS.gene80997.t1 | MTR_7g098180 | 37.500 | 312 | 190 | 4 | 31 | 342 | 1 | 307 | 7.98e-64 | 213 |
MS.gene80997.t1 | MTR_3g112460 | 38.947 | 285 | 167 | 2 | 58 | 342 | 18 | 295 | 6.97e-63 | 210 |
MS.gene80997.t1 | MTR_7g098150 | 37.097 | 310 | 188 | 6 | 34 | 342 | 5 | 308 | 5.73e-62 | 206 |
MS.gene80997.t1 | MTR_7g098220 | 38.762 | 307 | 182 | 5 | 44 | 350 | 13 | 313 | 1.66e-61 | 207 |
MS.gene80997.t1 | MTR_7g098090 | 39.560 | 273 | 159 | 5 | 34 | 305 | 5 | 272 | 1.22e-59 | 202 |
MS.gene80997.t1 | MTR_3g112450 | 38.014 | 292 | 175 | 2 | 51 | 342 | 12 | 297 | 1.22e-59 | 202 |
MS.gene80997.t1 | MTR_1g075440 | 37.542 | 301 | 179 | 6 | 44 | 342 | 11 | 304 | 2.17e-59 | 201 |
MS.gene80997.t1 | MTR_7g098200 | 37.209 | 301 | 183 | 5 | 42 | 342 | 10 | 304 | 3.00e-59 | 201 |
MS.gene80997.t1 | MTR_1g041815 | 37.329 | 292 | 177 | 4 | 51 | 342 | 16 | 301 | 3.07e-59 | 201 |
MS.gene80997.t1 | MTR_7g098160 | 38.462 | 273 | 162 | 5 | 34 | 305 | 5 | 272 | 2.26e-58 | 199 |
MS.gene80997.t1 | MTR_7g098200 | 37.931 | 290 | 174 | 5 | 42 | 331 | 10 | 293 | 1.88e-57 | 196 |
MS.gene80997.t1 | MTR_3g072300 | 35.621 | 306 | 185 | 5 | 38 | 342 | 1 | 295 | 9.30e-57 | 194 |
MS.gene80997.t1 | MTR_1g041835 | 36.301 | 292 | 180 | 4 | 51 | 342 | 16 | 301 | 1.02e-56 | 194 |
MS.gene80997.t1 | MTR_5g055000 | 35.517 | 290 | 178 | 3 | 63 | 351 | 18 | 299 | 3.16e-56 | 193 |
MS.gene80997.t1 | MTR_7g088825 | 36.986 | 292 | 174 | 4 | 54 | 342 | 10 | 294 | 6.03e-56 | 192 |
MS.gene80997.t1 | MTR_1g041875 | 35.644 | 303 | 188 | 5 | 40 | 342 | 8 | 303 | 6.43e-56 | 192 |
MS.gene80997.t1 | MTR_1g042310 | 35.786 | 299 | 185 | 5 | 44 | 342 | 9 | 300 | 1.24e-55 | 191 |
MS.gene80997.t1 | MTR_4g101380 | 38.436 | 307 | 172 | 5 | 48 | 342 | 2 | 303 | 1.36e-55 | 191 |
MS.gene80997.t1 | MTR_7g098040 | 36.452 | 310 | 190 | 6 | 34 | 342 | 6 | 309 | 1.52e-55 | 192 |
MS.gene80997.t1 | MTR_7g098230 | 38.828 | 273 | 163 | 3 | 70 | 342 | 33 | 301 | 3.86e-55 | 190 |
MS.gene80997.t1 | MTR_5g012270 | 36.458 | 288 | 164 | 5 | 62 | 342 | 28 | 303 | 1.36e-54 | 188 |
MS.gene80997.t1 | MTR_7g098220 | 37.729 | 273 | 166 | 3 | 78 | 350 | 1 | 269 | 4.66e-54 | 186 |
MS.gene80997.t1 | MTR_7g065080 | 35.294 | 289 | 176 | 4 | 54 | 342 | 22 | 299 | 1.96e-53 | 185 |
MS.gene80997.t1 | MTR_3g069500 | 35.587 | 281 | 169 | 5 | 62 | 342 | 34 | 302 | 3.35e-53 | 184 |
MS.gene80997.t1 | MTR_5g012290 | 40.484 | 289 | 156 | 3 | 60 | 342 | 24 | 302 | 4.03e-52 | 182 |
MS.gene80997.t1 | MTR_3g069420 | 34.752 | 282 | 170 | 6 | 62 | 342 | 33 | 301 | 1.24e-51 | 181 |
MS.gene80997.t1 | MTR_4g019580 | 35.294 | 289 | 176 | 4 | 54 | 342 | 27 | 304 | 2.39e-51 | 180 |
MS.gene80997.t1 | MTR_1g042310 | 35.361 | 263 | 165 | 3 | 80 | 342 | 6 | 263 | 1.54e-50 | 177 |
MS.gene80997.t1 | MTR_5g038060 | 36.897 | 290 | 172 | 4 | 54 | 341 | 27 | 307 | 1.23e-49 | 176 |
MS.gene80997.t1 | MTR_1g041885 | 36.398 | 261 | 161 | 3 | 82 | 342 | 1 | 256 | 5.61e-49 | 172 |
MS.gene80997.t1 | MTR_1g042310 | 34.866 | 261 | 165 | 3 | 82 | 342 | 1 | 256 | 7.39e-49 | 172 |
MS.gene80997.t1 | MTR_7g088790 | 34.948 | 289 | 181 | 3 | 63 | 351 | 29 | 310 | 7.61e-48 | 171 |
MS.gene80997.t1 | MTR_3g069440 | 33.808 | 281 | 174 | 6 | 62 | 342 | 32 | 300 | 1.27e-46 | 167 |
MS.gene80997.t1 | MTR_7g005930 | 35.135 | 296 | 174 | 6 | 52 | 342 | 25 | 307 | 2.63e-46 | 166 |
MS.gene80997.t1 | MTR_1g116930 | 35.915 | 284 | 168 | 5 | 62 | 342 | 22 | 294 | 3.16e-46 | 166 |
MS.gene80997.t1 | MTR_4g114340 | 37.102 | 283 | 165 | 3 | 60 | 342 | 21 | 290 | 2.96e-45 | 163 |
MS.gene80997.t1 | MTR_7g088820 | 32.143 | 280 | 183 | 3 | 63 | 342 | 25 | 297 | 3.78e-45 | 163 |
MS.gene80997.t1 | MTR_5g014150 | 34.752 | 282 | 176 | 4 | 62 | 342 | 43 | 317 | 6.37e-45 | 162 |
MS.gene80997.t1 | MTR_7g010820 | 34.875 | 281 | 175 | 3 | 62 | 342 | 25 | 297 | 1.03e-44 | 162 |
MS.gene80997.t1 | MTR_4g107530 | 32.759 | 290 | 185 | 5 | 66 | 353 | 36 | 317 | 1.05e-44 | 162 |
MS.gene80997.t1 | MTR_7g111260 | 35.000 | 280 | 169 | 4 | 63 | 342 | 19 | 285 | 1.16e-44 | 162 |
MS.gene80997.t1 | MTR_5g085850 | 37.324 | 284 | 163 | 3 | 60 | 341 | 27 | 297 | 8.10e-44 | 159 |
MS.gene80997.t1 | MTR_8g469480 | 33.813 | 278 | 178 | 3 | 66 | 341 | 41 | 314 | 1.51e-43 | 159 |
MS.gene80997.t1 | MTR_3g462710 | 43.814 | 194 | 100 | 3 | 149 | 342 | 1 | 185 | 3.50e-43 | 155 |
MS.gene80997.t1 | MTR_4g098800 | 33.108 | 296 | 183 | 6 | 51 | 342 | 25 | 309 | 9.19e-43 | 156 |
MS.gene80997.t1 | MTR_4g107610 | 34.507 | 284 | 170 | 7 | 63 | 342 | 31 | 302 | 1.29e-42 | 156 |
MS.gene80997.t1 | MTR_4g098800 | 33.108 | 296 | 183 | 6 | 51 | 342 | 90 | 374 | 2.08e-42 | 156 |
MS.gene80997.t1 | MTR_7g013270 | 35.192 | 287 | 167 | 6 | 63 | 342 | 90 | 364 | 3.91e-42 | 155 |
MS.gene80997.t1 | MTR_4g107510 | 31.488 | 289 | 186 | 6 | 66 | 351 | 39 | 318 | 3.44e-41 | 152 |
MS.gene80997.t1 | MTR_1g085090 | 32.500 | 280 | 175 | 4 | 63 | 342 | 19 | 284 | 5.28e-41 | 152 |
MS.gene80997.t1 | MTR_3g100980 | 32.624 | 282 | 183 | 5 | 63 | 342 | 16 | 292 | 1.74e-40 | 150 |
MS.gene80997.t1 | MTR_2g017750 | 32.028 | 281 | 186 | 3 | 63 | 342 | 34 | 310 | 6.95e-40 | 149 |
MS.gene80997.t1 | MTR_8g087810 | 33.803 | 284 | 177 | 5 | 63 | 342 | 21 | 297 | 2.92e-39 | 147 |
MS.gene80997.t1 | MTR_7g088820 | 33.195 | 241 | 154 | 3 | 102 | 342 | 2 | 235 | 7.83e-39 | 145 |
MS.gene80997.t1 | MTR_4g033375 | 30.888 | 259 | 155 | 3 | 62 | 315 | 31 | 270 | 1.04e-38 | 144 |
MS.gene80997.t1 | MTR_4g033395 | 31.641 | 256 | 157 | 3 | 62 | 315 | 31 | 270 | 1.21e-38 | 144 |
MS.gene80997.t1 | MTR_4g107580 | 30.928 | 291 | 191 | 3 | 66 | 354 | 27 | 309 | 2.84e-38 | 144 |
MS.gene80997.t1 | MTR_2g101590 | 34.495 | 287 | 163 | 8 | 63 | 342 | 26 | 294 | 1.29e-37 | 142 |
MS.gene80997.t1 | MTR_7g065080 | 36.652 | 221 | 129 | 4 | 122 | 342 | 3 | 212 | 1.59e-37 | 140 |
MS.gene80997.t1 | MTR_2g101610 | 34.965 | 286 | 159 | 9 | 65 | 342 | 29 | 295 | 2.86e-37 | 142 |
MS.gene80997.t1 | MTR_8g038880 | 36.585 | 246 | 132 | 2 | 62 | 307 | 19 | 240 | 5.78e-37 | 140 |
MS.gene80997.t1 | MTR_8g469470 | 29.893 | 281 | 190 | 3 | 63 | 341 | 32 | 307 | 1.84e-36 | 139 |
MS.gene80997.t1 | MTR_1g009200 | 31.095 | 283 | 179 | 3 | 63 | 342 | 27 | 296 | 2.72e-36 | 139 |
MS.gene80997.t1 | MTR_4g033325 | 32.422 | 256 | 155 | 3 | 62 | 315 | 30 | 269 | 3.23e-36 | 138 |
MS.gene80997.t1 | MTR_5g038190 | 33.065 | 248 | 164 | 1 | 59 | 306 | 20 | 265 | 4.47e-36 | 138 |
MS.gene80997.t1 | MTR_8g087780 | 31.250 | 288 | 179 | 5 | 63 | 342 | 21 | 297 | 6.41e-36 | 137 |
MS.gene80997.t1 | MTR_4g033315 | 31.765 | 255 | 156 | 4 | 62 | 314 | 30 | 268 | 6.59e-36 | 137 |
MS.gene80997.t1 | MTR_4g033310 | 31.765 | 255 | 156 | 4 | 62 | 314 | 30 | 268 | 6.59e-36 | 137 |
MS.gene80997.t1 | MTR_3g100980 | 29.677 | 310 | 183 | 6 | 63 | 342 | 16 | 320 | 6.51e-35 | 135 |
MS.gene80997.t1 | MTR_3g014790 | 34.008 | 247 | 137 | 3 | 62 | 307 | 16 | 237 | 2.48e-34 | 133 |
MS.gene80997.t1 | MTR_5g038380 | 33.456 | 272 | 168 | 3 | 31 | 302 | 3 | 261 | 3.07e-34 | 132 |
MS.gene80997.t1 | MTR_3g005010 | 33.865 | 251 | 143 | 3 | 62 | 309 | 29 | 259 | 3.18e-34 | 132 |
MS.gene80997.t1 | MTR_1g026740 | 29.474 | 285 | 188 | 4 | 58 | 342 | 12 | 283 | 4.38e-34 | 132 |
MS.gene80997.t1 | MTR_7g064800 | 29.412 | 306 | 205 | 5 | 51 | 351 | 14 | 313 | 5.12e-34 | 132 |
MS.gene80997.t1 | MTR_4g107670 | 31.338 | 284 | 169 | 5 | 34 | 309 | 2 | 267 | 1.18e-33 | 131 |
MS.gene80997.t1 | MTR_4g033330 | 30.272 | 294 | 178 | 5 | 63 | 354 | 31 | 299 | 1.21e-33 | 130 |
MS.gene80997.t1 | MTR_0294s0020 | 31.250 | 256 | 158 | 3 | 62 | 315 | 30 | 269 | 2.41e-33 | 130 |
MS.gene80997.t1 | MTR_8g469310 | 32.423 | 293 | 179 | 5 | 63 | 342 | 26 | 312 | 3.86e-33 | 129 |
MS.gene80997.t1 | MTR_7g064780 | 28.852 | 305 | 208 | 4 | 50 | 351 | 13 | 311 | 4.20e-33 | 129 |
MS.gene80997.t1 | MTR_7g098200 | 39.759 | 166 | 99 | 1 | 177 | 342 | 26 | 190 | 1.41e-32 | 127 |
MS.gene80997.t1 | MTR_2g005130 | 29.831 | 295 | 188 | 5 | 48 | 342 | 26 | 301 | 1.49e-32 | 128 |
MS.gene80997.t1 | MTR_4g123537 | 31.579 | 304 | 191 | 8 | 42 | 341 | 18 | 308 | 2.88e-32 | 127 |
MS.gene80997.t1 | MTR_7g051880 | 33.071 | 254 | 155 | 4 | 60 | 313 | 22 | 260 | 2.64e-31 | 124 |
MS.gene80997.t1 | MTR_2g101650 | 28.435 | 313 | 206 | 8 | 46 | 354 | 7 | 305 | 7.09e-30 | 120 |
MS.gene80997.t1 | MTR_1g026750 | 28.425 | 292 | 192 | 5 | 65 | 354 | 20 | 296 | 8.86e-30 | 120 |
MS.gene80997.t1 | MTR_1g026770 | 29.010 | 293 | 191 | 7 | 65 | 355 | 17 | 294 | 9.92e-30 | 120 |
MS.gene80997.t1 | MTR_7g088820 | 37.349 | 166 | 103 | 1 | 177 | 342 | 23 | 187 | 1.17e-29 | 119 |
MS.gene80997.t1 | MTR_8g103233 | 32.534 | 292 | 161 | 7 | 63 | 342 | 17 | 284 | 3.28e-29 | 118 |
MS.gene80997.t1 | MTR_7g052600 | 33.778 | 225 | 134 | 3 | 89 | 313 | 51 | 260 | 3.98e-29 | 118 |
MS.gene80997.t1 | MTR_7g051830 | 33.333 | 225 | 135 | 3 | 89 | 313 | 51 | 260 | 5.03e-29 | 117 |
MS.gene80997.t1 | MTR_2g101640 | 33.597 | 253 | 147 | 8 | 63 | 307 | 23 | 262 | 6.48e-29 | 118 |
MS.gene80997.t1 | MTR_2g101560 | 33.333 | 285 | 165 | 8 | 65 | 342 | 29 | 295 | 2.91e-27 | 113 |
MS.gene80997.t1 | MTR_4g011280 | 30.952 | 294 | 168 | 8 | 61 | 342 | 30 | 300 | 3.98e-27 | 112 |
MS.gene80997.t1 | MTR_1g057460 | 27.915 | 283 | 174 | 7 | 65 | 342 | 46 | 303 | 3.49e-25 | 107 |
MS.gene80997.t1 | MTR_4g033310 | 35.359 | 181 | 100 | 4 | 62 | 242 | 30 | 193 | 3.45e-24 | 103 |
MS.gene80997.t1 | MTR_4g024930 | 30.814 | 172 | 114 | 2 | 62 | 233 | 35 | 201 | 2.89e-23 | 101 |
MS.gene80997.t1 | MTR_1g057460 | 26.038 | 265 | 170 | 6 | 95 | 354 | 1 | 244 | 2.11e-21 | 95.5 |
MS.gene80997.t1 | MTR_0236s0050 | 26.749 | 243 | 156 | 5 | 113 | 354 | 23 | 244 | 7.92e-21 | 94.0 |
MS.gene80997.t1 | MTR_4g033325 | 29.814 | 161 | 99 | 2 | 157 | 315 | 23 | 171 | 6.28e-19 | 88.2 |
MS.gene80997.t1 | MTR_1g009170 | 32.903 | 155 | 94 | 2 | 191 | 342 | 5 | 152 | 1.22e-18 | 86.7 |
MS.gene80997.t1 | MTR_4g033385 | 32.143 | 140 | 91 | 2 | 178 | 315 | 32 | 169 | 1.29e-18 | 87.0 |
MS.gene80997.t1 | MTR_4g033325 | 32.331 | 133 | 88 | 1 | 185 | 315 | 13 | 145 | 1.55e-18 | 86.7 |
MS.gene80997.t1 | MTR_2g093640 | 25.794 | 252 | 178 | 2 | 56 | 307 | 14 | 256 | 1.77e-17 | 84.0 |
MS.gene80997.t1 | MTR_2g093160 | 27.236 | 246 | 170 | 3 | 62 | 307 | 20 | 256 | 9.49e-17 | 81.6 |
MS.gene80997.t1 | MTR_2g093180 | 30.081 | 246 | 163 | 5 | 62 | 307 | 20 | 256 | 1.86e-16 | 80.9 |
MS.gene80997.t1 | MTR_7g098210 | 25.954 | 262 | 125 | 8 | 82 | 342 | 1 | 194 | 2.07e-14 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80997.t1 | AT5G13400 | 78.592 | 341 | 72 | 1 | 1 | 340 | 1 | 341 | 0.0 | 562 |
MS.gene80997.t1 | AT3G54140 | 43.144 | 299 | 159 | 5 | 44 | 342 | 7 | 294 | 1.28e-77 | 249 |
MS.gene80997.t1 | AT3G54140 | 43.144 | 299 | 159 | 5 | 44 | 342 | 7 | 294 | 1.28e-77 | 249 |
MS.gene80997.t1 | AT1G62200 | 40.836 | 311 | 178 | 3 | 32 | 342 | 22 | 326 | 2.62e-72 | 235 |
MS.gene80997.t1 | AT1G62200 | 40.645 | 310 | 178 | 3 | 32 | 341 | 22 | 325 | 3.18e-71 | 233 |
MS.gene80997.t1 | AT1G62200 | 40.645 | 310 | 178 | 3 | 32 | 341 | 36 | 339 | 3.20e-71 | 234 |
MS.gene80997.t1 | AT5G01180 | 41.806 | 299 | 162 | 5 | 44 | 342 | 8 | 294 | 5.71e-71 | 231 |
MS.gene80997.t1 | AT5G01180 | 41.806 | 299 | 162 | 5 | 44 | 342 | 8 | 294 | 5.71e-71 | 231 |
MS.gene80997.t1 | AT5G01180 | 41.806 | 299 | 162 | 5 | 44 | 342 | 8 | 294 | 5.71e-71 | 231 |
MS.gene80997.t1 | AT2G02040 | 41.637 | 281 | 154 | 3 | 63 | 342 | 41 | 312 | 8.03e-71 | 231 |
MS.gene80997.t1 | AT2G02020 | 42.353 | 255 | 139 | 3 | 51 | 305 | 31 | 277 | 1.02e-61 | 206 |
MS.gene80997.t1 | AT2G02020 | 42.353 | 255 | 139 | 3 | 51 | 305 | 31 | 277 | 1.56e-61 | 206 |
MS.gene80997.t1 | AT5G46040 | 37.299 | 311 | 188 | 5 | 40 | 350 | 6 | 309 | 2.19e-59 | 201 |
MS.gene80997.t1 | AT2G37900 | 36.242 | 298 | 169 | 6 | 45 | 342 | 29 | 305 | 1.73e-57 | 196 |
MS.gene80997.t1 | AT5G46050 | 34.983 | 303 | 190 | 4 | 40 | 342 | 6 | 301 | 1.50e-55 | 191 |
MS.gene80997.t1 | AT2G40460 | 35.621 | 306 | 185 | 5 | 38 | 342 | 1 | 295 | 2.05e-55 | 191 |
MS.gene80997.t1 | AT1G12110 | 39.860 | 286 | 162 | 4 | 60 | 341 | 24 | 303 | 1.75e-53 | 186 |
MS.gene80997.t1 | AT2G26690 | 38.516 | 283 | 161 | 5 | 60 | 342 | 21 | 290 | 9.74e-53 | 183 |
MS.gene80997.t1 | AT3G53960 | 37.500 | 264 | 145 | 5 | 45 | 307 | 28 | 272 | 4.82e-52 | 182 |
MS.gene80997.t1 | AT1G68570 | 36.237 | 287 | 176 | 2 | 65 | 351 | 25 | 304 | 2.70e-51 | 180 |
MS.gene80997.t1 | AT1G68570 | 35.379 | 277 | 172 | 2 | 75 | 351 | 5 | 274 | 6.70e-48 | 170 |
MS.gene80997.t1 | AT3G21670 | 39.841 | 251 | 149 | 1 | 60 | 310 | 26 | 274 | 8.90e-48 | 170 |
MS.gene80997.t1 | AT2G26690 | 36.567 | 268 | 157 | 4 | 75 | 342 | 3 | 257 | 1.22e-45 | 164 |
MS.gene80997.t1 | AT2G37900 | 38.197 | 233 | 132 | 5 | 110 | 342 | 6 | 226 | 2.61e-44 | 159 |
MS.gene80997.t1 | AT3G54450 | 31.560 | 282 | 168 | 2 | 65 | 342 | 14 | 274 | 4.92e-44 | 159 |
MS.gene80997.t1 | AT4G21680 | 34.164 | 281 | 176 | 3 | 62 | 342 | 27 | 298 | 2.22e-43 | 158 |
MS.gene80997.t1 | AT2G26690 | 36.576 | 257 | 150 | 4 | 86 | 342 | 2 | 245 | 1.91e-42 | 155 |
MS.gene80997.t1 | AT1G32450 | 32.484 | 314 | 183 | 9 | 41 | 342 | 17 | 313 | 6.65e-41 | 152 |
MS.gene80997.t1 | AT5G19640 | 34.589 | 292 | 173 | 7 | 64 | 351 | 60 | 337 | 2.10e-40 | 150 |
MS.gene80997.t1 | AT1G69870 | 32.558 | 301 | 191 | 6 | 44 | 341 | 33 | 324 | 3.63e-40 | 150 |
MS.gene80997.t1 | AT1G27080 | 31.164 | 292 | 191 | 4 | 53 | 342 | 4 | 287 | 1.07e-38 | 145 |
MS.gene80997.t1 | AT1G52190 | 34.586 | 266 | 165 | 5 | 50 | 310 | 5 | 266 | 1.53e-38 | 145 |
MS.gene80997.t1 | AT1G72120 | 36.111 | 252 | 145 | 3 | 62 | 309 | 28 | 267 | 1.72e-38 | 144 |
MS.gene80997.t1 | AT1G18880 | 30.690 | 290 | 192 | 2 | 66 | 355 | 22 | 302 | 3.28e-38 | 144 |
MS.gene80997.t1 | AT1G22570 | 33.588 | 262 | 157 | 3 | 62 | 315 | 29 | 281 | 3.37e-38 | 144 |
MS.gene80997.t1 | AT1G59740 | 31.673 | 281 | 187 | 2 | 62 | 342 | 40 | 315 | 5.42e-38 | 143 |
MS.gene80997.t1 | AT1G72125 | 33.829 | 269 | 160 | 5 | 62 | 326 | 28 | 282 | 2.16e-37 | 141 |
MS.gene80997.t1 | AT1G69860 | 32.095 | 296 | 188 | 5 | 52 | 342 | 3 | 290 | 2.16e-37 | 141 |
MS.gene80997.t1 | AT1G69850 | 33.214 | 280 | 179 | 3 | 63 | 341 | 25 | 297 | 3.54e-36 | 138 |
MS.gene80997.t1 | AT5G28470 | 33.202 | 253 | 160 | 4 | 63 | 313 | 17 | 262 | 4.07e-36 | 138 |
MS.gene80997.t1 | AT5G28470 | 33.202 | 253 | 160 | 4 | 63 | 313 | 17 | 262 | 4.33e-36 | 138 |
MS.gene80997.t1 | AT3G16180 | 32.143 | 280 | 178 | 4 | 65 | 342 | 25 | 294 | 4.35e-36 | 138 |
MS.gene80997.t1 | AT1G33440 | 32.069 | 290 | 187 | 4 | 62 | 351 | 37 | 316 | 1.82e-35 | 136 |
MS.gene80997.t1 | AT3G25260 | 30.357 | 280 | 172 | 4 | 63 | 342 | 21 | 277 | 3.68e-35 | 134 |
MS.gene80997.t1 | AT1G22540 | 34.800 | 250 | 152 | 5 | 62 | 309 | 29 | 269 | 6.89e-35 | 134 |
MS.gene80997.t1 | AT5G62680 | 29.552 | 335 | 222 | 6 | 21 | 351 | 1 | 325 | 7.33e-35 | 135 |
MS.gene80997.t1 | AT1G22550 | 33.333 | 261 | 156 | 4 | 62 | 313 | 29 | 280 | 1.76e-33 | 130 |
MS.gene80997.t1 | AT5G62730 | 29.643 | 280 | 166 | 3 | 34 | 309 | 34 | 286 | 1.32e-32 | 128 |
MS.gene80997.t1 | AT3G45710 | 32.061 | 262 | 162 | 5 | 56 | 314 | 14 | 262 | 1.53e-32 | 128 |
MS.gene80997.t1 | AT1G22570 | 32.000 | 250 | 153 | 3 | 74 | 315 | 4 | 244 | 1.62e-32 | 127 |
MS.gene80997.t1 | AT5G46050 | 33.862 | 189 | 124 | 1 | 154 | 342 | 2 | 189 | 3.62e-32 | 125 |
MS.gene80997.t1 | AT3G25280 | 29.921 | 254 | 163 | 2 | 63 | 316 | 21 | 259 | 1.88e-31 | 124 |
MS.gene80997.t1 | AT3G47960 | 29.592 | 294 | 190 | 4 | 66 | 355 | 64 | 344 | 2.43e-31 | 125 |
MS.gene80997.t1 | AT5G62730 | 31.301 | 246 | 145 | 3 | 68 | 309 | 2 | 227 | 7.84e-31 | 122 |
MS.gene80997.t1 | AT1G27040 | 32.917 | 240 | 157 | 2 | 63 | 302 | 27 | 262 | 6.23e-30 | 120 |
MS.gene80997.t1 | AT1G27040 | 32.917 | 240 | 157 | 2 | 63 | 302 | 23 | 258 | 6.46e-30 | 120 |
MS.gene80997.t1 | AT1G72140 | 28.906 | 256 | 165 | 3 | 62 | 309 | 33 | 279 | 1.21e-29 | 119 |
MS.gene80997.t1 | AT3G45690 | 33.203 | 256 | 155 | 6 | 62 | 314 | 17 | 259 | 1.38e-29 | 119 |
MS.gene80997.t1 | AT1G72130 | 32.400 | 250 | 151 | 4 | 62 | 308 | 24 | 258 | 6.51e-29 | 117 |
MS.gene80997.t1 | AT1G27080 | 30.769 | 247 | 161 | 4 | 98 | 342 | 7 | 245 | 7.86e-29 | 117 |
MS.gene80997.t1 | AT3G45680 | 31.741 | 293 | 181 | 8 | 62 | 351 | 19 | 295 | 1.61e-28 | 116 |
MS.gene80997.t1 | AT3G45700 | 32.530 | 249 | 152 | 5 | 62 | 307 | 15 | 250 | 2.36e-28 | 115 |
MS.gene80997.t1 | AT1G27040 | 32.743 | 226 | 148 | 2 | 77 | 302 | 9 | 230 | 1.10e-26 | 111 |
MS.gene80997.t1 | AT5G11570 | 31.489 | 235 | 144 | 6 | 72 | 298 | 22 | 247 | 9.75e-25 | 105 |
MS.gene80997.t1 | AT3G45720 | 30.924 | 249 | 154 | 6 | 63 | 307 | 19 | 253 | 5.66e-23 | 100 |
MS.gene80997.t1 | AT3G45650 | 26.190 | 252 | 176 | 4 | 63 | 314 | 22 | 263 | 3.52e-22 | 98.2 |
MS.gene80997.t1 | AT3G45650 | 26.400 | 250 | 174 | 4 | 65 | 314 | 24 | 263 | 4.44e-22 | 97.8 |
MS.gene80997.t1 | AT3G45660 | 27.953 | 254 | 169 | 7 | 63 | 314 | 21 | 262 | 2.03e-21 | 95.9 |
MS.gene80997.t1 | AT3G45660 | 27.953 | 254 | 169 | 7 | 63 | 314 | 21 | 262 | 2.03e-21 | 95.9 |
MS.gene80997.t1 | AT3G45660 | 27.953 | 254 | 169 | 7 | 63 | 314 | 42 | 283 | 2.94e-21 | 95.5 |
MS.gene80997.t1 | AT5G14940 | 25.106 | 235 | 144 | 4 | 80 | 299 | 24 | 241 | 1.67e-16 | 81.3 |
MS.gene80997.t1 | AT3G01350 | 25.676 | 222 | 135 | 4 | 80 | 289 | 24 | 227 | 1.93e-16 | 80.9 |
MS.gene80997.t1 | AT1G72130 | 31.496 | 127 | 84 | 1 | 185 | 308 | 14 | 140 | 2.74e-12 | 67.8 |
MS.gene80997.t1 | AT1G72130 | 31.496 | 127 | 84 | 1 | 185 | 308 | 14 | 140 | 2.74e-12 | 67.8 |
Find 0 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTTATTATGATTATGAAAA+TGG | - | 50634:10868-10887 | MS.gene80997:CDS | 15.0% |
!! | AGAATGCATTAAAATATATT+AGG | - | 50634:10816-10835 | MS.gene80997:CDS | 15.0% |
!!! | CAATTTATTTTAATCTTTGT+TGG | - | 50634:12286-12305 | MS.gene80997:intron | 15.0% |
!! | ATACATACCAAATATAAAGA+AGG | + | 50634:10663-10682 | None:intergenic | 20.0% |
!! | CAAAGTTATTATGATATATC+TGG | + | 50634:11808-11827 | None:intergenic | 20.0% |
!! | TATAACTAGAAATGTTACAT+TGG | - | 50634:11375-11394 | MS.gene80997:intron | 20.0% |
!! | TTAAGAGTGAATAAATAGAT+TGG | - | 50634:11229-11248 | MS.gene80997:CDS | 20.0% |
!!! | AATGGTATTTTACAATTTTG+TGG | + | 50634:11314-11333 | None:intergenic | 20.0% |
!!! | CTAATTTTCCTATGAAATTT+AGG | + | 50634:11533-11552 | None:intergenic | 20.0% |
!!! | TTATTTTCTTAAGTTGCTAA+TGG | - | 50634:12159-12178 | MS.gene80997:CDS | 20.0% |
!!! | TTTCATAGGAAAATTAGTTT+AGG | - | 50634:11536-11555 | MS.gene80997:intron | 20.0% |
! | AATGCAGTCAATAATTTCTT+AGG | - | 50634:11047-11066 | MS.gene80997:intron | 25.0% |
! | ATGCATCACATAAAACATAA+AGG | + | 50634:11006-11025 | None:intergenic | 25.0% |
! | ATTCTATCATATTTCTCAAC+AGG | - | 50634:12309-12328 | MS.gene80997:intron | 25.0% |
! | GTCTATGTTCAAATGAAATT+GGG | - | 50634:12471-12490 | MS.gene80997:intron | 25.0% |
! | TTCCTAATAGAAGTGATAAT+TGG | + | 50634:11925-11944 | None:intergenic | 25.0% |
! | TTGCTAATTCACAAAAATGA+GGG | + | 50634:11285-11304 | None:intergenic | 25.0% |
! | TTTGCTAATTCACAAAAATG+AGG | + | 50634:11286-11305 | None:intergenic | 25.0% |
!! | ATTCCAAACTTTTATGAACA+GGG | - | 50634:11836-11855 | MS.gene80997:intron | 25.0% |
!! | GATTTTCCATGAATATTAAC+AGG | + | 50634:10602-10621 | None:intergenic | 25.0% |
!! | TAAGAAATTATTGACTGCAT+TGG | + | 50634:11048-11067 | None:intergenic | 25.0% |
!! | TCTAACATGCTTTTCTTTAT+TGG | - | 50634:12537-12556 | MS.gene80997:intron | 25.0% |
!!! | ATGTTTTTGAGGTAAAAGAT+AGG | - | 50634:10750-10769 | MS.gene80997:CDS | 25.0% |
!!! | GATTTTTTTTGTTGCTTCTA+TGG | - | 50634:10914-10933 | MS.gene80997:intron | 25.0% |
!!! | TAGTATATGTCATGTTTTTG+AGG | - | 50634:10739-10758 | MS.gene80997:CDS | 25.0% |
AAATGAAATGGCAGAAAGAA+TGG | - | 50634:10950-10969 | MS.gene80997:intron | 30.0% | |
AACATATCAACAACTTCGAA+TGG | + | 50634:11332-11351 | None:intergenic | 30.0% | |
ATCTTACGATATGTGTATGT+TGG | - | 50634:10694-10713 | MS.gene80997:CDS | 30.0% | |
ATGAGTGACCTAAATTTCAT+AGG | - | 50634:11522-11541 | MS.gene80997:intron | 30.0% | |
ATGTTCAAATGAAATTGGGT+TGG | - | 50634:12475-12494 | MS.gene80997:intron | 30.0% | |
ATTGCTGCCTTCTTTATATT+TGG | - | 50634:10653-10672 | MS.gene80997:CDS | 30.0% | |
CAAACTATGAAGAATTGACA+CGG | + | 50634:12220-12239 | None:intergenic | 30.0% | |
CGAAAGAGAAAAGAATCATT+TGG | - | 50634:12636-12655 | MS.gene80997:CDS | 30.0% | |
GACCAATTATCACTTCTATT+AGG | - | 50634:11920-11939 | MS.gene80997:intron | 30.0% | |
GGTCTATGTTCAAATGAAAT+TGG | - | 50634:12470-12489 | MS.gene80997:intron | 30.0% | |
GTTCTATACATAACAGCATT+TGG | - | 50634:11989-12008 | MS.gene80997:intron | 30.0% | |
TAGGATAAGATCTGAATTCT+TGG | - | 50634:10769-10788 | MS.gene80997:CDS | 30.0% | |
TATTCATGGAAAATCCATTG+AGG | - | 50634:10607-10626 | MS.gene80997:CDS | 30.0% | |
TCTACACCTGTTAATATTCA+TGG | - | 50634:10593-10612 | MS.gene80997:CDS | 30.0% | |
TGCTAATTCACAAAAATGAG+GGG | + | 50634:11284-11303 | None:intergenic | 30.0% | |
TGTTCAAATGAAATTGGGTT+GGG | - | 50634:12476-12495 | MS.gene80997:intron | 30.0% | |
TTATGTATAGAACAGTGTAG+AGG | + | 50634:11982-12001 | None:intergenic | 30.0% | |
TTCATAGACAAATTAGTCCT+TGG | + | 50634:11429-11448 | None:intergenic | 30.0% | |
TTCTATCTTTCTGTGACAAT+TGG | - | 50634:12423-12442 | MS.gene80997:intron | 30.0% | |
TTTGTTTCGACTTAGTGAAT+AGG | + | 50634:11760-11779 | None:intergenic | 30.0% | |
! | AGTATGTAGTTTTTGCGAAT+TGG | + | 50634:11700-11719 | None:intergenic | 30.0% |
! | ATAATTGGTCACAGTTTTCT+TGG | + | 50634:11910-11929 | None:intergenic | 30.0% |
! | CATTCCAAACTTTTATGAAC+AGG | - | 50634:11835-11854 | MS.gene80997:intron | 30.0% |
! | TTCTTTTCTCTTTCGATAAG+CGG | + | 50634:12631-12650 | None:intergenic | 30.0% |
! | TTGGTAATAGTGAAGTTGTT+GGG | - | 50634:12655-12674 | MS.gene80997:CDS | 30.0% |
! | TTTGGTAATAGTGAAGTTGT+TGG | - | 50634:12654-12673 | MS.gene80997:CDS | 30.0% |
! | TTTTGGACTTTCTGTTAACA+TGG | - | 50634:10977-10996 | MS.gene80997:intron | 30.0% |
!! | ATTGAGGATCTTTCTAAAAC+TGG | - | 50634:10623-10642 | MS.gene80997:CDS | 30.0% |
!!! | AGTTTTAGAAAGATCCTCAA+TGG | + | 50634:10624-10643 | None:intergenic | 30.0% |
!!! | TTGATAGAGACTATTTTGAC+CGG | - | 50634:11647-11666 | MS.gene80997:intron | 30.0% |
!!! | TTTTTTTGTTGCTTCTATGG+TGG | - | 50634:10917-10936 | MS.gene80997:intron | 30.0% |
AAGCCCTGTTCATAAAAGTT+TGG | + | 50634:11842-11861 | None:intergenic | 35.0% | |
ACATCAATGTTAACTCTCCA+AGG | - | 50634:11409-11428 | MS.gene80997:intron | 35.0% | |
CTTCACTACAATTTATCTCG+CGG | - | 50634:11145-11164 | MS.gene80997:intron | 35.0% | |
GACTTAGTGAATAGGCAAAT+TGG | + | 50634:11752-11771 | None:intergenic | 35.0% | |
GGTAGAAGATCTGCTATAAA+GGG | - | 50634:12693-12712 | MS.gene80997:CDS | 35.0% | |
GTACACCTTTGTATAGACAT+AGG | - | 50634:12559-12578 | MS.gene80997:intron | 35.0% | |
TCAATGAGCAGAAAGAAACT+TGG | - | 50634:10509-10528 | MS.gene80997:CDS | 35.0% | |
TGAATAGGCAAATTGGTTGT+AGG | + | 50634:11745-11764 | None:intergenic | 35.0% | |
TGGTAGAAGATCTGCTATAA+AGG | - | 50634:12692-12711 | MS.gene80997:CDS | 35.0% | |
TGTCACATCATAGTCTCTAA+AGG | - | 50634:11618-11637 | MS.gene80997:intron | 35.0% | |
TGTTAGATATAGCTGGTGAT+TGG | - | 50634:12024-12043 | MS.gene80997:intron | 35.0% | |
TTGCTCATACTGATGATTTC+AGG | - | 50634:12727-12746 | MS.gene80997:CDS | 35.0% | |
TTGGAGAGTTAACATTGATG+TGG | + | 50634:11410-11429 | None:intergenic | 35.0% | |
TTTATAGCAGATCTTCTACC+AGG | + | 50634:12693-12712 | None:intergenic | 35.0% | |
! | AGACCATGTGTATCTTCTTT+TGG | - | 50634:12336-12355 | MS.gene80997:intron | 35.0% |
! | CAGGTATTGTTAGATATAGC+TGG | - | 50634:12017-12036 | MS.gene80997:intron | 35.0% |
! | CATTTTCTTCATTGAGTCTG+AGG | - | 50634:10532-10551 | MS.gene80997:CDS | 35.0% |
! | GCAGAAAGAATGGCTTATTT+TGG | - | 50634:10960-10979 | MS.gene80997:intron | 35.0% |
! | GTTCAAATGAAATTGGGTTG+GGG | - | 50634:12477-12496 | MS.gene80997:intron | 35.0% |
! | TGAAGTGTTATGACATGTGT+CGG | + | 50634:12133-12152 | None:intergenic | 35.0% |
! | TTTTATGAACAGGGCTTAAC+TGG | - | 50634:11845-11864 | MS.gene80997:intron | 35.0% |
! | TTTTGCTTCTTTCGTCGAAT+TGG | + | 50634:12368-12387 | None:intergenic | 35.0% |
!! | ATCTTTCTAAAACTGGTGGT+TGG | - | 50634:10630-10649 | MS.gene80997:CDS | 35.0% |
!! | TCTCTGAAACTGTAAAGTAC+CGG | + | 50634:11669-11688 | None:intergenic | 35.0% |
AATTGTAGCATTCACAGCAG+TGG | - | 50634:12449-12468 | MS.gene80997:intron | 40.0% | |
ACATTGATGCTAGATCAACG+TGG | - | 50634:11566-11585 | MS.gene80997:intron | 40.0% | |
ATCTGACAGCTCAAATCGAA+AGG | + | 50634:11183-11202 | None:intergenic | 40.0% | |
CCAAACTCAGCAAACAAACA+TGG | + | 50634:10842-10861 | None:intergenic | 40.0% | |
CTACAATTTATCTCGCGGTA+TGG | - | 50634:11150-11169 | MS.gene80997:intron | 40.0% | |
GACATCGGACACAATACTAA+CGG | + | 50634:12198-12217 | None:intergenic | 40.0% | |
GCATTGGATGAACTTGCAAA+AGG | + | 50634:11032-11051 | None:intergenic | 40.0% | |
GCTCCAAAAGAAGATACACA+TGG | + | 50634:12342-12361 | None:intergenic | 40.0% | |
GGCAACCTATGTCTATACAA+AGG | + | 50634:12567-12586 | None:intergenic | 40.0% | |
GGTTACTGCAGGAAATGAAA+TGG | - | 50634:10938-10957 | MS.gene80997:intron | 40.0% | |
GGTTCATTGGCAATAGCAAT+GGG | - | 50634:12510-12529 | MS.gene80997:intron | 40.0% | |
TCACAAGCTTCTTCTGTTCT+TGG | - | 50634:11074-11093 | MS.gene80997:intron | 40.0% | |
TCATTGAGTCTGAGGATAGA+AGG | - | 50634:10540-10559 | MS.gene80997:CDS | 40.0% | |
TGAAGAATTGACACGGACAT+CGG | + | 50634:12213-12232 | None:intergenic | 40.0% | |
TGGTTCATTGGCAATAGCAA+TGG | - | 50634:12509-12528 | MS.gene80997:intron | 40.0% | |
TTGTATAGACATAGGTTGCC+AGG | - | 50634:12567-12586 | MS.gene80997:intron | 40.0% | |
TTTCTGCTCATTGAAGTGCA+TGG | + | 50634:10503-10522 | None:intergenic | 40.0% | |
! | AGGATAGAAGGATGGCTTTA+GGG | - | 50634:10552-10571 | MS.gene80997:CDS | 40.0% |
! | CCATGTTTGTTTGCTGAGTT+TGG | - | 50634:10839-10858 | MS.gene80997:CDS | 40.0% |
! | TAGAGGTATGTCATTTGCCA+TGG | + | 50634:11965-11984 | None:intergenic | 40.0% |
! | TGAAGTTGTTGGGTTGTATG+AGG | - | 50634:12665-12684 | MS.gene80997:CDS | 40.0% |
! | TGGTCACAGTTTTCTTGGTT+TGG | + | 50634:11905-11924 | None:intergenic | 40.0% |
!! | GAGGATCTTTCTAAAACTGG+TGG | - | 50634:10626-10645 | MS.gene80997:CDS | 40.0% |
!! | TTTCTAGCTGATGCATACCT+TGG | - | 50634:11101-11120 | MS.gene80997:intron | 40.0% |
ATGCATACCTTGGACGTTAC+TGG | - | 50634:11111-11130 | MS.gene80997:intron | 45.0% | |
ATGCTAGATCAACGTGGTTG+AGG | - | 50634:11572-11591 | MS.gene80997:intron | 45.0% | |
CAAGCTTCTTCTGTTCTTGG+TGG | - | 50634:11077-11096 | MS.gene80997:intron | 45.0% | |
CTATTGTCCAGTAACGTCCA+AGG | + | 50634:11121-11140 | None:intergenic | 45.0% | |
CTGACATTTCTTTCCCGTGT+TGG | - | 50634:12087-12106 | MS.gene80997:CDS | 45.0% | |
GAGGATAGAAGGATGGCTTT+AGG | - | 50634:10551-10570 | MS.gene80997:CDS | 45.0% | |
TACACGAGTCGCTCAAGTAT+TGG | - | 50634:12602-12621 | MS.gene80997:CDS | 45.0% | |
TATAGACATAGGTTGCCAGG+TGG | - | 50634:12570-12589 | MS.gene80997:intron | 45.0% | |
TGAGTCTGAGGATAGAAGGA+TGG | - | 50634:10544-10563 | MS.gene80997:CDS | 45.0% | |
TTAGGGCGTGGTTATACAAG+AGG | - | 50634:10569-10588 | MS.gene80997:CDS | 45.0% | |
TTGGAGCTGAGTAGTTAGCA+AGG | + | 50634:12766-12785 | None:intergenic | 45.0% | |
! | ATAACAGCATTTGGAGCTGC+AGG | - | 50634:11998-12017 | MS.gene80997:intron | 45.0% |
!! | GTCATTTGCCATGGTTTTGC+AGG | + | 50634:11956-11975 | None:intergenic | 45.0% |
!!! | GGGTTCTGCTTTTGGTTCAT+TGG | - | 50634:12497-12516 | MS.gene80997:intron | 45.0% |
ACTGTGAGCCTGCAAAACCA+TGG | - | 50634:11945-11964 | MS.gene80997:intron | 50.0% | |
ACTTGAGCGACTCGTGTAAG+AGG | + | 50634:12600-12619 | None:intergenic | 50.0% | |
CACCAGAAGCTCCTCAACAA+GGG | - | 50634:10474-10493 | MS.gene80997:CDS | 50.0% | |
GCTTCTATGGTGGTTACTGC+AGG | - | 50634:10927-10946 | MS.gene80997:intron | 50.0% | |
TCACCAGAAGCTCCTCAACA+AGG | - | 50634:10473-10492 | MS.gene80997:CDS | 50.0% | |
TGTCGGCATCATGTCGATGT+CGG | + | 50634:12116-12135 | None:intergenic | 50.0% | |
! | GTTGGGTTGTATGAGGTTCC+TGG | - | 50634:12672-12691 | MS.gene80997:CDS | 50.0% |
!!! | TTGGGTTGGGGTTCTGCTTT+TGG | - | 50634:12489-12508 | MS.gene80997:intron | 50.0% |
CGTGTAAGAGGACTTCCACC+TGG | + | 50634:12588-12607 | None:intergenic | 55.0% | |
GTCCCTTGTTGAGGAGCTTC+TGG | + | 50634:10479-10498 | None:intergenic | 55.0% | |
GTCGATGTCGGACACCAACA+CGG | + | 50634:12104-12123 | None:intergenic | 55.0% | |
GTGCATGGTGTCCCTTGTTG+AGG | + | 50634:10488-10507 | None:intergenic | 55.0% | |
TCGATGTCGGACACCAACAC+GGG | + | 50634:12103-12122 | None:intergenic | 55.0% | |
!! | AGAAGGATGGCTTTAGGGCG+TGG | - | 50634:10557-10576 | MS.gene80997:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
50634 | gene | 10452 | 12794 | 10452 | ID=MS.gene80997 |
50634 | mRNA | 10452 | 12794 | 10452 | ID=MS.gene80997.t1;Parent=MS.gene80997 |
50634 | exon | 12572 | 12794 | 12572 | ID=MS.gene80997.t1.exon1;Parent=MS.gene80997.t1 |
50634 | CDS | 12572 | 12794 | 12572 | ID=cds.MS.gene80997.t1;Parent=MS.gene80997.t1 |
50634 | exon | 12080 | 12297 | 12080 | ID=MS.gene80997.t1.exon2;Parent=MS.gene80997.t1 |
50634 | CDS | 12080 | 12297 | 12080 | ID=cds.MS.gene80997.t1;Parent=MS.gene80997.t1 |
50634 | exon | 11227 | 11389 | 11227 | ID=MS.gene80997.t1.exon3;Parent=MS.gene80997.t1 |
50634 | CDS | 11227 | 11389 | 11227 | ID=cds.MS.gene80997.t1;Parent=MS.gene80997.t1 |
50634 | exon | 10452 | 10915 | 10452 | ID=MS.gene80997.t1.exon4;Parent=MS.gene80997.t1 |
50634 | CDS | 10452 | 10915 | 10452 | ID=cds.MS.gene80997.t1;Parent=MS.gene80997.t1 |
Gene Sequence |
Protein sequence |