Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97223.t1 | XP_024626124.1 | 75.5 | 595 | 23 | 3 | 2 | 474 | 203 | 796 | 2.30E-237 | 831.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97223.t1 | Q3E9B5 | 51.0 | 541 | 125 | 7 | 49 | 464 | 70 | 595 | 5.8e-136 | 485.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97223.t1 | G7L599 | 74.7 | 574 | 22 | 3 | 23 | 474 | 75 | 647 | 3.0e-226 | 793.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97223.t1 | MTR_7g013270 | 96.575 | 292 | 9 | 1 | 23 | 314 | 75 | 365 | 0.0 | 578 |
MS.gene97223.t1 | MTR_7g013270 | 73.869 | 199 | 16 | 1 | 312 | 474 | 449 | 647 | 1.59e-88 | 283 |
MS.gene97223.t1 | MTR_7g005930 | 87.540 | 313 | 34 | 2 | 2 | 314 | 1 | 308 | 0.0 | 551 |
MS.gene97223.t1 | MTR_7g005930 | 68.912 | 193 | 24 | 1 | 312 | 468 | 392 | 584 | 1.92e-79 | 258 |
MS.gene97223.t1 | MTR_1g116930 | 72.101 | 276 | 73 | 2 | 39 | 314 | 24 | 295 | 1.37e-138 | 411 |
MS.gene97223.t1 | MTR_1g116930 | 48.744 | 199 | 61 | 2 | 312 | 474 | 380 | 573 | 8.08e-55 | 193 |
MS.gene97223.t1 | MTR_7g010820 | 60.839 | 286 | 106 | 3 | 30 | 314 | 18 | 298 | 2.84e-112 | 343 |
MS.gene97223.t1 | MTR_7g010820 | 41.000 | 200 | 70 | 4 | 311 | 462 | 385 | 584 | 1.98e-30 | 124 |
MS.gene97223.t1 | MTR_4g098800 | 60.140 | 286 | 110 | 2 | 30 | 314 | 28 | 310 | 4.11e-110 | 338 |
MS.gene97223.t1 | MTR_4g098800 | 42.541 | 181 | 66 | 3 | 311 | 454 | 397 | 576 | 6.71e-37 | 143 |
MS.gene97223.t1 | MTR_4g098800 | 60.140 | 286 | 110 | 2 | 30 | 314 | 93 | 375 | 1.76e-109 | 338 |
MS.gene97223.t1 | MTR_4g098800 | 42.541 | 181 | 66 | 3 | 311 | 454 | 462 | 641 | 9.53e-37 | 143 |
MS.gene97223.t1 | MTR_5g014150 | 60.490 | 286 | 109 | 2 | 30 | 314 | 36 | 318 | 2.92e-106 | 328 |
MS.gene97223.t1 | MTR_5g014150 | 41.584 | 202 | 68 | 5 | 311 | 469 | 405 | 599 | 3.84e-37 | 144 |
MS.gene97223.t1 | MTR_7g067010 | 40.845 | 284 | 160 | 4 | 32 | 314 | 18 | 294 | 7.51e-65 | 219 |
MS.gene97223.t1 | MTR_7g067010 | 35.359 | 181 | 77 | 2 | 311 | 451 | 379 | 559 | 9.41e-28 | 116 |
MS.gene97223.t1 | MTR_3g462710 | 40.780 | 282 | 160 | 4 | 31 | 311 | 17 | 292 | 5.91e-63 | 214 |
MS.gene97223.t1 | MTR_3g462710 | 38.889 | 180 | 70 | 2 | 311 | 450 | 381 | 560 | 2.35e-32 | 130 |
MS.gene97223.t1 | MTR_3g112460 | 35.017 | 297 | 184 | 4 | 18 | 310 | 1 | 292 | 5.41e-61 | 209 |
MS.gene97223.t1 | MTR_3g112460 | 31.461 | 178 | 82 | 3 | 311 | 452 | 378 | 551 | 3.15e-22 | 100 |
MS.gene97223.t1 | MTR_1g042310 | 38.710 | 279 | 166 | 3 | 29 | 305 | 17 | 292 | 2.73e-59 | 205 |
MS.gene97223.t1 | MTR_4g015080 | 39.068 | 279 | 162 | 4 | 37 | 314 | 33 | 304 | 5.06e-59 | 204 |
MS.gene97223.t1 | MTR_4g015080 | 33.889 | 180 | 79 | 2 | 311 | 450 | 389 | 568 | 1.86e-26 | 112 |
MS.gene97223.t1 | MTR_7g098150 | 34.948 | 289 | 182 | 4 | 29 | 314 | 24 | 309 | 5.10e-59 | 202 |
MS.gene97223.t1 | MTR_3g112470 | 34.680 | 297 | 185 | 4 | 18 | 310 | 1 | 292 | 1.58e-58 | 202 |
MS.gene97223.t1 | MTR_3g112470 | 32.022 | 178 | 81 | 3 | 311 | 452 | 378 | 551 | 6.36e-23 | 102 |
MS.gene97223.t1 | MTR_7g098090 | 34.948 | 289 | 182 | 4 | 29 | 314 | 24 | 309 | 2.66e-58 | 202 |
MS.gene97223.t1 | MTR_7g098160 | 35.294 | 289 | 181 | 4 | 29 | 314 | 24 | 309 | 1.55e-57 | 200 |
MS.gene97223.t1 | MTR_7g098180 | 34.828 | 290 | 182 | 3 | 29 | 314 | 22 | 308 | 3.56e-57 | 199 |
MS.gene97223.t1 | MTR_7g098200 | 34.602 | 289 | 183 | 3 | 29 | 314 | 20 | 305 | 1.66e-56 | 197 |
MS.gene97223.t1 | MTR_1g041815 | 35.842 | 279 | 174 | 3 | 29 | 305 | 18 | 293 | 8.88e-56 | 196 |
MS.gene97223.t1 | MTR_1g042310 | 40.239 | 251 | 145 | 3 | 57 | 305 | 1 | 248 | 2.62e-55 | 193 |
MS.gene97223.t1 | MTR_1g042310 | 40.239 | 251 | 145 | 3 | 57 | 305 | 8 | 255 | 2.98e-55 | 193 |
MS.gene97223.t1 | MTR_7g098040 | 33.793 | 290 | 184 | 5 | 29 | 314 | 25 | 310 | 7.63e-55 | 193 |
MS.gene97223.t1 | MTR_1g041835 | 35.484 | 279 | 175 | 3 | 29 | 305 | 18 | 293 | 2.53e-54 | 191 |
MS.gene97223.t1 | MTR_1g041835 | 28.426 | 197 | 100 | 3 | 311 | 466 | 381 | 577 | 1.86e-12 | 69.7 |
MS.gene97223.t1 | MTR_7g098220 | 34.602 | 289 | 183 | 3 | 29 | 314 | 21 | 306 | 2.58e-54 | 191 |
MS.gene97223.t1 | MTR_7g098200 | 34.657 | 277 | 175 | 3 | 29 | 302 | 20 | 293 | 3.02e-54 | 191 |
MS.gene97223.t1 | MTR_3g112450 | 35.816 | 282 | 174 | 4 | 30 | 308 | 15 | 292 | 3.58e-53 | 188 |
MS.gene97223.t1 | MTR_3g112450 | 32.447 | 188 | 86 | 5 | 312 | 462 | 380 | 563 | 1.98e-22 | 100 |
MS.gene97223.t1 | MTR_1g075440 | 35.172 | 290 | 181 | 4 | 17 | 302 | 5 | 291 | 4.69e-53 | 188 |
MS.gene97223.t1 | MTR_1g075440 | 30.000 | 200 | 99 | 2 | 311 | 469 | 383 | 582 | 3.92e-20 | 94.0 |
MS.gene97223.t1 | MTR_7g098230 | 32.177 | 317 | 188 | 5 | 3 | 314 | 8 | 302 | 9.30e-53 | 187 |
MS.gene97223.t1 | MTR_3g072300 | 32.515 | 326 | 207 | 7 | 30 | 353 | 16 | 330 | 2.47e-52 | 186 |
MS.gene97223.t1 | MTR_3g072300 | 27.072 | 181 | 91 | 2 | 311 | 450 | 378 | 558 | 3.14e-15 | 78.6 |
MS.gene97223.t1 | MTR_4g024930 | 49.756 | 205 | 97 | 2 | 31 | 232 | 29 | 230 | 3.02e-52 | 186 |
MS.gene97223.t1 | MTR_4g024930 | 39.181 | 171 | 66 | 3 | 319 | 451 | 383 | 553 | 5.48e-28 | 117 |
MS.gene97223.t1 | MTR_1g041875 | 35.417 | 288 | 181 | 3 | 29 | 314 | 20 | 304 | 2.86e-51 | 183 |
MS.gene97223.t1 | MTR_7g098220 | 36.398 | 261 | 160 | 3 | 57 | 314 | 5 | 262 | 5.33e-51 | 182 |
MS.gene97223.t1 | MTR_4g019580 | 34.982 | 283 | 175 | 5 | 30 | 311 | 28 | 302 | 2.60e-50 | 181 |
MS.gene97223.t1 | MTR_4g019580 | 29.557 | 203 | 101 | 7 | 293 | 455 | 373 | 573 | 1.27e-15 | 79.7 |
MS.gene97223.t1 | MTR_1g041885 | 38.077 | 260 | 156 | 3 | 57 | 314 | 1 | 257 | 6.21e-50 | 178 |
MS.gene97223.t1 | MTR_7g065080 | 35.985 | 264 | 162 | 4 | 30 | 292 | 23 | 280 | 3.48e-49 | 177 |
MS.gene97223.t1 | MTR_4g033375 | 39.163 | 263 | 143 | 6 | 21 | 280 | 14 | 262 | 7.67e-49 | 175 |
MS.gene97223.t1 | MTR_4g033375 | 34.737 | 95 | 56 | 2 | 311 | 399 | 369 | 463 | 2.68e-11 | 65.9 |
MS.gene97223.t1 | MTR_4g033395 | 37.154 | 253 | 143 | 4 | 30 | 280 | 24 | 262 | 2.85e-48 | 173 |
MS.gene97223.t1 | MTR_5g012270 | 31.579 | 304 | 200 | 5 | 15 | 314 | 5 | 304 | 2.11e-46 | 170 |
MS.gene97223.t1 | MTR_5g012270 | 32.044 | 181 | 79 | 4 | 312 | 450 | 391 | 569 | 1.85e-20 | 94.7 |
MS.gene97223.t1 | MTR_3g069420 | 33.712 | 264 | 167 | 4 | 30 | 292 | 26 | 282 | 1.40e-45 | 167 |
MS.gene97223.t1 | MTR_3g069500 | 32.955 | 264 | 169 | 4 | 30 | 292 | 27 | 283 | 1.43e-43 | 162 |
MS.gene97223.t1 | MTR_5g055000 | 32.258 | 279 | 184 | 3 | 37 | 314 | 17 | 291 | 2.53e-43 | 161 |
MS.gene97223.t1 | MTR_4g033325 | 35.740 | 277 | 162 | 4 | 30 | 304 | 23 | 285 | 1.02e-42 | 159 |
MS.gene97223.t1 | MTR_4g033325 | 29.121 | 182 | 87 | 3 | 311 | 450 | 365 | 546 | 1.62e-17 | 85.5 |
MS.gene97223.t1 | MTR_4g033330 | 36.538 | 260 | 149 | 4 | 30 | 287 | 23 | 268 | 1.92e-42 | 158 |
MS.gene97223.t1 | MTR_4g033330 | 29.697 | 165 | 73 | 3 | 313 | 435 | 370 | 533 | 1.24e-13 | 73.6 |
MS.gene97223.t1 | MTR_5g012290 | 33.110 | 299 | 194 | 3 | 19 | 314 | 8 | 303 | 2.39e-42 | 159 |
MS.gene97223.t1 | MTR_3g014790 | 35.019 | 257 | 141 | 3 | 30 | 282 | 5 | 239 | 5.76e-42 | 157 |
MS.gene97223.t1 | MTR_0294s0020 | 37.945 | 253 | 141 | 4 | 30 | 280 | 23 | 261 | 6.01e-41 | 154 |
MS.gene97223.t1 | MTR_0294s0020 | 28.061 | 196 | 97 | 4 | 310 | 463 | 364 | 557 | 6.92e-20 | 92.8 |
MS.gene97223.t1 | MTR_4g033315 | 36.538 | 260 | 149 | 4 | 30 | 287 | 23 | 268 | 1.40e-40 | 153 |
MS.gene97223.t1 | MTR_4g033315 | 27.692 | 195 | 97 | 4 | 311 | 463 | 367 | 559 | 3.45e-17 | 84.7 |
MS.gene97223.t1 | MTR_4g033310 | 36.538 | 260 | 149 | 4 | 30 | 287 | 23 | 268 | 1.40e-40 | 153 |
MS.gene97223.t1 | MTR_4g033310 | 27.692 | 195 | 97 | 4 | 311 | 463 | 367 | 559 | 3.45e-17 | 84.7 |
MS.gene97223.t1 | MTR_7g006540 | 34.667 | 300 | 175 | 8 | 28 | 314 | 52 | 343 | 2.83e-40 | 153 |
MS.gene97223.t1 | MTR_4g101380 | 31.488 | 289 | 191 | 4 | 30 | 314 | 19 | 304 | 8.59e-40 | 151 |
MS.gene97223.t1 | MTR_4g101380 | 33.702 | 181 | 76 | 4 | 312 | 450 | 392 | 570 | 3.28e-17 | 84.7 |
MS.gene97223.t1 | MTR_3g069440 | 33.333 | 264 | 168 | 4 | 30 | 292 | 25 | 281 | 1.46e-39 | 150 |
MS.gene97223.t1 | MTR_4g107580 | 30.392 | 306 | 197 | 4 | 16 | 314 | 2 | 298 | 3.97e-39 | 150 |
MS.gene97223.t1 | MTR_3g005010 | 35.461 | 282 | 156 | 8 | 22 | 298 | 13 | 273 | 1.47e-38 | 147 |
MS.gene97223.t1 | MTR_3g005010 | 30.601 | 183 | 83 | 3 | 311 | 450 | 359 | 540 | 4.27e-19 | 90.5 |
MS.gene97223.t1 | MTR_8g087780 | 29.781 | 319 | 216 | 5 | 22 | 335 | 4 | 319 | 3.84e-38 | 147 |
MS.gene97223.t1 | MTR_5g038060 | 31.250 | 256 | 170 | 2 | 37 | 289 | 30 | 282 | 6.55e-38 | 146 |
MS.gene97223.t1 | MTR_8g469470 | 32.500 | 280 | 178 | 3 | 2 | 278 | 1 | 272 | 3.79e-37 | 144 |
MS.gene97223.t1 | MTR_8g087810 | 31.525 | 295 | 193 | 6 | 22 | 311 | 4 | 294 | 8.26e-37 | 143 |
MS.gene97223.t1 | MTR_2g017750 | 31.410 | 312 | 195 | 8 | 17 | 321 | 10 | 309 | 1.25e-36 | 142 |
MS.gene97223.t1 | MTR_7g088825 | 31.469 | 286 | 187 | 5 | 30 | 310 | 10 | 291 | 1.64e-36 | 142 |
MS.gene97223.t1 | MTR_7g088820 | 28.912 | 294 | 202 | 4 | 19 | 310 | 6 | 294 | 9.40e-36 | 140 |
MS.gene97223.t1 | MTR_8g469480 | 33.466 | 251 | 160 | 3 | 41 | 287 | 41 | 288 | 2.23e-35 | 139 |
MS.gene97223.t1 | MTR_3g100980 | 28.826 | 281 | 190 | 4 | 35 | 310 | 13 | 288 | 3.40e-35 | 138 |
MS.gene97223.t1 | MTR_4g123537 | 32.862 | 283 | 180 | 6 | 34 | 314 | 36 | 310 | 6.66e-35 | 138 |
MS.gene97223.t1 | MTR_4g123537 | 31.818 | 176 | 80 | 4 | 319 | 455 | 398 | 572 | 1.14e-20 | 95.5 |
MS.gene97223.t1 | MTR_4g114340 | 33.574 | 277 | 179 | 3 | 40 | 315 | 26 | 298 | 6.90e-35 | 137 |
MS.gene97223.t1 | MTR_1g026740 | 32.787 | 244 | 157 | 2 | 39 | 282 | 18 | 254 | 8.53e-35 | 137 |
MS.gene97223.t1 | MTR_3g462710 | 38.624 | 189 | 109 | 4 | 124 | 311 | 1 | 183 | 2.95e-34 | 134 |
MS.gene97223.t1 | MTR_3g462710 | 38.889 | 180 | 70 | 2 | 311 | 450 | 272 | 451 | 5.48e-33 | 130 |
MS.gene97223.t1 | MTR_2g005130 | 33.214 | 280 | 179 | 3 | 2 | 278 | 1 | 275 | 6.21e-34 | 135 |
MS.gene97223.t1 | MTR_2g005130 | 31.122 | 196 | 91 | 5 | 311 | 468 | 385 | 574 | 8.30e-18 | 86.7 |
MS.gene97223.t1 | MTR_4g107670 | 29.012 | 324 | 206 | 7 | 32 | 340 | 18 | 332 | 2.56e-33 | 133 |
MS.gene97223.t1 | MTR_8g038880 | 34.286 | 245 | 139 | 2 | 38 | 282 | 20 | 242 | 3.49e-33 | 132 |
MS.gene97223.t1 | MTR_4g107510 | 27.742 | 310 | 214 | 5 | 6 | 314 | 9 | 309 | 3.95e-33 | 132 |
MS.gene97223.t1 | MTR_5g038190 | 31.086 | 267 | 177 | 3 | 25 | 287 | 11 | 274 | 3.95e-33 | 132 |
MS.gene97223.t1 | MTR_1g009200 | 29.008 | 262 | 185 | 1 | 39 | 300 | 28 | 288 | 5.77e-33 | 132 |
MS.gene97223.t1 | MTR_7g088790 | 32.234 | 273 | 180 | 3 | 39 | 310 | 30 | 298 | 6.22e-33 | 132 |
MS.gene97223.t1 | MTR_1g085090 | 28.929 | 280 | 185 | 5 | 37 | 314 | 18 | 285 | 5.65e-32 | 129 |
MS.gene97223.t1 | MTR_1g085090 | 27.442 | 215 | 99 | 9 | 313 | 473 | 366 | 577 | 6.54e-13 | 71.2 |
MS.gene97223.t1 | MTR_8g469310 | 35.169 | 236 | 149 | 2 | 40 | 275 | 28 | 259 | 8.23e-32 | 128 |
MS.gene97223.t1 | MTR_7g065080 | 35.533 | 197 | 120 | 4 | 97 | 292 | 3 | 193 | 9.76e-32 | 127 |
MS.gene97223.t1 | MTR_4g107530 | 29.268 | 246 | 170 | 2 | 41 | 285 | 36 | 278 | 1.24e-31 | 128 |
MS.gene97223.t1 | MTR_4g107610 | 28.912 | 294 | 201 | 4 | 13 | 305 | 6 | 292 | 2.53e-31 | 127 |
MS.gene97223.t1 | MTR_1g026750 | 33.468 | 248 | 158 | 2 | 33 | 280 | 13 | 253 | 3.74e-31 | 126 |
MS.gene97223.t1 | MTR_7g098200 | 34.536 | 194 | 121 | 3 | 124 | 314 | 1 | 191 | 4.38e-31 | 125 |
MS.gene97223.t1 | MTR_2g093160 | 30.182 | 275 | 179 | 3 | 17 | 290 | 4 | 266 | 4.60e-31 | 126 |
MS.gene97223.t1 | MTR_5g038380 | 32.653 | 245 | 161 | 2 | 31 | 275 | 21 | 261 | 7.76e-31 | 125 |
MS.gene97223.t1 | MTR_7g111260 | 26.014 | 296 | 208 | 4 | 37 | 331 | 18 | 303 | 6.00e-30 | 123 |
MS.gene97223.t1 | MTR_3g100980 | 26.214 | 309 | 190 | 5 | 35 | 310 | 13 | 316 | 8.93e-30 | 122 |
MS.gene97223.t1 | MTR_1g026770 | 29.078 | 282 | 191 | 3 | 33 | 314 | 10 | 282 | 1.82e-29 | 121 |
MS.gene97223.t1 | MTR_7g088820 | 30.172 | 232 | 155 | 4 | 81 | 310 | 6 | 232 | 1.68e-28 | 118 |
MS.gene97223.t1 | MTR_7g064780 | 27.636 | 275 | 191 | 3 | 39 | 309 | 27 | 297 | 7.49e-28 | 117 |
MS.gene97223.t1 | MTR_2g093180 | 29.603 | 277 | 182 | 3 | 17 | 292 | 4 | 268 | 1.64e-27 | 115 |
MS.gene97223.t1 | MTR_4g033325 | 36.413 | 184 | 101 | 4 | 123 | 304 | 18 | 187 | 1.96e-26 | 112 |
MS.gene97223.t1 | MTR_4g033325 | 29.121 | 182 | 87 | 3 | 311 | 450 | 267 | 448 | 1.22e-17 | 85.5 |
MS.gene97223.t1 | MTR_7g051830 | 29.057 | 265 | 173 | 4 | 19 | 281 | 4 | 255 | 2.17e-26 | 112 |
MS.gene97223.t1 | MTR_2g093640 | 29.329 | 283 | 185 | 4 | 17 | 296 | 4 | 274 | 4.68e-26 | 111 |
MS.gene97223.t1 | MTR_2g101640 | 29.183 | 257 | 177 | 3 | 37 | 291 | 22 | 275 | 1.36e-25 | 110 |
MS.gene97223.t1 | MTR_7g064800 | 27.953 | 254 | 179 | 2 | 37 | 289 | 25 | 275 | 1.41e-25 | 110 |
MS.gene97223.t1 | MTR_4g033310 | 35.912 | 181 | 102 | 3 | 30 | 210 | 23 | 189 | 4.39e-25 | 108 |
MS.gene97223.t1 | MTR_4g033310 | 27.692 | 195 | 97 | 4 | 311 | 463 | 303 | 495 | 2.67e-17 | 84.7 |
MS.gene97223.t1 | MTR_4g033325 | 38.926 | 149 | 86 | 2 | 158 | 304 | 16 | 161 | 5.25e-25 | 107 |
MS.gene97223.t1 | MTR_4g033325 | 29.121 | 182 | 87 | 3 | 311 | 450 | 241 | 422 | 1.14e-17 | 85.5 |
MS.gene97223.t1 | MTR_2g101610 | 29.961 | 257 | 175 | 3 | 37 | 291 | 26 | 279 | 5.28e-25 | 108 |
MS.gene97223.t1 | MTR_2g101650 | 29.020 | 255 | 175 | 4 | 37 | 289 | 23 | 273 | 6.40e-25 | 108 |
MS.gene97223.t1 | MTR_7g052600 | 29.502 | 261 | 167 | 4 | 19 | 276 | 4 | 250 | 1.01e-24 | 107 |
MS.gene97223.t1 | MTR_4g033385 | 37.725 | 167 | 88 | 4 | 123 | 287 | 16 | 168 | 1.84e-24 | 106 |
MS.gene97223.t1 | MTR_4g033385 | 25.641 | 195 | 101 | 4 | 311 | 463 | 268 | 460 | 6.34e-16 | 80.1 |
MS.gene97223.t1 | MTR_5g085850 | 30.556 | 252 | 169 | 2 | 30 | 278 | 22 | 270 | 3.00e-24 | 106 |
MS.gene97223.t1 | MTR_5g085850 | 26.842 | 190 | 102 | 3 | 311 | 465 | 384 | 571 | 1.86e-16 | 82.4 |
MS.gene97223.t1 | MTR_7g051880 | 26.897 | 290 | 193 | 5 | 30 | 313 | 17 | 293 | 3.60e-24 | 105 |
MS.gene97223.t1 | MTR_8g103233 | 29.218 | 243 | 169 | 2 | 35 | 277 | 14 | 253 | 1.50e-23 | 104 |
MS.gene97223.t1 | MTR_2g101590 | 27.778 | 288 | 193 | 4 | 37 | 312 | 25 | 309 | 1.78e-23 | 104 |
MS.gene97223.t1 | MTR_1g057460 | 27.875 | 287 | 178 | 6 | 37 | 321 | 43 | 302 | 1.72e-21 | 97.8 |
MS.gene97223.t1 | MTR_4g011280 | 29.297 | 256 | 176 | 3 | 38 | 291 | 32 | 284 | 1.76e-21 | 97.8 |
MS.gene97223.t1 | MTR_6g008690 | 30.870 | 230 | 135 | 4 | 37 | 257 | 6 | 220 | 3.68e-20 | 93.6 |
MS.gene97223.t1 | MTR_6g008690 | 25.824 | 182 | 93 | 3 | 311 | 450 | 352 | 533 | 5.02e-15 | 77.8 |
MS.gene97223.t1 | MTR_7g088820 | 29.032 | 186 | 125 | 4 | 127 | 310 | 4 | 184 | 6.40e-20 | 92.8 |
MS.gene97223.t1 | MTR_2g101560 | 28.958 | 259 | 175 | 4 | 37 | 291 | 26 | 279 | 9.46e-20 | 92.8 |
MS.gene97223.t1 | MTR_7g098210 | 26.894 | 264 | 118 | 7 | 57 | 314 | 1 | 195 | 1.82e-17 | 85.1 |
MS.gene97223.t1 | MTR_0236s0050 | 28.634 | 227 | 133 | 6 | 97 | 321 | 32 | 231 | 5.32e-17 | 84.0 |
MS.gene97223.t1 | MTR_1g057460 | 30.457 | 197 | 123 | 5 | 97 | 291 | 32 | 216 | 1.57e-16 | 82.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97223.t1 | AT5G19640 | 72.325 | 271 | 67 | 2 | 39 | 308 | 60 | 323 | 2.02e-135 | 404 |
MS.gene97223.t1 | AT5G19640 | 44.211 | 190 | 61 | 3 | 312 | 464 | 414 | 595 | 1.56e-40 | 154 |
MS.gene97223.t1 | AT1G32450 | 55.921 | 304 | 125 | 5 | 17 | 314 | 14 | 314 | 1.49e-103 | 322 |
MS.gene97223.t1 | AT1G32450 | 40.000 | 200 | 78 | 4 | 311 | 469 | 401 | 599 | 2.35e-36 | 142 |
MS.gene97223.t1 | AT4G21680 | 56.993 | 286 | 116 | 3 | 30 | 314 | 20 | 299 | 6.22e-100 | 311 |
MS.gene97223.t1 | AT4G21680 | 38.547 | 179 | 67 | 3 | 320 | 455 | 397 | 575 | 3.67e-28 | 118 |
MS.gene97223.t1 | AT2G02020 | 31.084 | 489 | 258 | 12 | 29 | 445 | 33 | 514 | 8.97e-74 | 241 |
MS.gene97223.t1 | AT2G02020 | 30.196 | 510 | 256 | 11 | 29 | 445 | 33 | 535 | 1.70e-71 | 236 |
MS.gene97223.t1 | AT3G54140 | 40.000 | 285 | 164 | 4 | 29 | 312 | 15 | 293 | 1.94e-65 | 221 |
MS.gene97223.t1 | AT3G54140 | 40.884 | 181 | 67 | 2 | 311 | 451 | 381 | 561 | 5.58e-36 | 140 |
MS.gene97223.t1 | AT3G54140 | 40.000 | 285 | 164 | 4 | 29 | 312 | 15 | 293 | 1.94e-65 | 221 |
MS.gene97223.t1 | AT3G54140 | 40.884 | 181 | 67 | 2 | 311 | 451 | 381 | 561 | 5.58e-36 | 140 |
MS.gene97223.t1 | AT2G02040 | 37.762 | 286 | 172 | 3 | 30 | 314 | 33 | 313 | 5.50e-62 | 212 |
MS.gene97223.t1 | AT2G02040 | 33.702 | 181 | 79 | 2 | 312 | 451 | 399 | 579 | 5.89e-24 | 105 |
MS.gene97223.t1 | AT1G62200 | 34.835 | 333 | 211 | 4 | 29 | 359 | 43 | 371 | 7.73e-58 | 201 |
MS.gene97223.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 313 | 451 | 414 | 586 | 3.01e-23 | 103 |
MS.gene97223.t1 | AT1G62200 | 35.880 | 301 | 179 | 4 | 29 | 327 | 43 | 331 | 1.44e-57 | 201 |
MS.gene97223.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 313 | 451 | 443 | 615 | 3.92e-23 | 103 |
MS.gene97223.t1 | AT1G62200 | 35.880 | 301 | 179 | 4 | 29 | 327 | 57 | 345 | 1.61e-57 | 201 |
MS.gene97223.t1 | AT1G62200 | 32.955 | 176 | 78 | 3 | 313 | 451 | 457 | 629 | 3.40e-23 | 103 |
MS.gene97223.t1 | AT5G01180 | 36.170 | 282 | 172 | 5 | 29 | 309 | 16 | 290 | 2.12e-55 | 194 |
MS.gene97223.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 311 | 450 | 381 | 560 | 2.45e-31 | 127 |
MS.gene97223.t1 | AT5G01180 | 36.170 | 282 | 172 | 5 | 29 | 309 | 16 | 290 | 2.12e-55 | 194 |
MS.gene97223.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 311 | 450 | 381 | 560 | 2.45e-31 | 127 |
MS.gene97223.t1 | AT5G01180 | 36.170 | 282 | 172 | 5 | 29 | 309 | 16 | 290 | 2.12e-55 | 194 |
MS.gene97223.t1 | AT5G01180 | 38.333 | 180 | 71 | 2 | 311 | 450 | 381 | 560 | 2.45e-31 | 127 |
MS.gene97223.t1 | AT1G72130 | 27.017 | 533 | 267 | 13 | 26 | 450 | 12 | 530 | 8.87e-51 | 181 |
MS.gene97223.t1 | AT2G37900 | 33.916 | 286 | 179 | 5 | 30 | 314 | 30 | 306 | 7.24e-48 | 174 |
MS.gene97223.t1 | AT2G40460 | 33.108 | 296 | 187 | 5 | 18 | 308 | 1 | 290 | 1.35e-47 | 173 |
MS.gene97223.t1 | AT2G40460 | 28.729 | 181 | 88 | 2 | 311 | 450 | 372 | 552 | 1.41e-14 | 76.6 |
MS.gene97223.t1 | AT1G12110 | 34.641 | 306 | 190 | 5 | 15 | 314 | 4 | 305 | 5.07e-47 | 172 |
MS.gene97223.t1 | AT5G46040 | 31.293 | 294 | 190 | 5 | 24 | 314 | 18 | 302 | 8.26e-47 | 171 |
MS.gene97223.t1 | AT5G46040 | 29.293 | 198 | 99 | 3 | 312 | 468 | 382 | 579 | 3.66e-13 | 72.0 |
MS.gene97223.t1 | AT5G13400 | 35.395 | 291 | 177 | 6 | 28 | 310 | 53 | 340 | 1.73e-43 | 162 |
MS.gene97223.t1 | AT5G11570 | 28.875 | 471 | 268 | 9 | 39 | 450 | 14 | 476 | 3.89e-43 | 159 |
MS.gene97223.t1 | AT5G46050 | 31.633 | 294 | 189 | 5 | 24 | 314 | 18 | 302 | 5.95e-43 | 160 |
MS.gene97223.t1 | AT5G46050 | 27.363 | 201 | 105 | 3 | 311 | 470 | 381 | 581 | 3.67e-13 | 72.0 |
MS.gene97223.t1 | AT3G54450 | 32.800 | 250 | 149 | 2 | 37 | 286 | 11 | 241 | 9.85e-42 | 156 |
MS.gene97223.t1 | AT3G54450 | 28.571 | 196 | 93 | 6 | 311 | 461 | 359 | 552 | 1.97e-17 | 85.5 |
MS.gene97223.t1 | AT1G72125 | 33.948 | 271 | 165 | 3 | 12 | 278 | 3 | 263 | 3.44e-41 | 155 |
MS.gene97223.t1 | AT2G26690 | 33.125 | 320 | 203 | 6 | 30 | 344 | 16 | 329 | 1.78e-40 | 153 |
MS.gene97223.t1 | AT3G53960 | 32.082 | 293 | 175 | 8 | 30 | 314 | 29 | 305 | 7.79e-40 | 152 |
MS.gene97223.t1 | AT3G53960 | 28.090 | 178 | 90 | 3 | 311 | 450 | 393 | 570 | 2.46e-15 | 79.0 |
MS.gene97223.t1 | AT1G69870 | 31.481 | 270 | 178 | 4 | 35 | 302 | 48 | 312 | 1.45e-39 | 151 |
MS.gene97223.t1 | AT1G22570 | 36.759 | 253 | 147 | 4 | 38 | 282 | 30 | 277 | 2.21e-39 | 150 |
MS.gene97223.t1 | AT1G22570 | 28.750 | 160 | 75 | 4 | 311 | 431 | 379 | 538 | 9.78e-13 | 70.9 |
MS.gene97223.t1 | AT1G72120 | 33.333 | 270 | 166 | 3 | 12 | 277 | 3 | 262 | 4.76e-38 | 146 |
MS.gene97223.t1 | AT1G22550 | 37.091 | 275 | 161 | 5 | 38 | 306 | 30 | 298 | 5.28e-37 | 143 |
MS.gene97223.t1 | AT1G22540 | 32.331 | 266 | 167 | 4 | 30 | 289 | 22 | 280 | 5.63e-37 | 143 |
MS.gene97223.t1 | AT1G22540 | 28.415 | 183 | 89 | 2 | 310 | 450 | 367 | 549 | 6.63e-19 | 90.1 |
MS.gene97223.t1 | AT1G72140 | 30.798 | 263 | 167 | 3 | 30 | 284 | 26 | 281 | 1.42e-36 | 142 |
MS.gene97223.t1 | AT1G68570 | 30.584 | 291 | 195 | 4 | 25 | 314 | 12 | 296 | 1.90e-36 | 142 |
MS.gene97223.t1 | AT2G37900 | 34.043 | 235 | 145 | 5 | 81 | 314 | 2 | 227 | 7.67e-36 | 139 |
MS.gene97223.t1 | AT2G26690 | 32.886 | 298 | 189 | 6 | 52 | 344 | 5 | 296 | 9.22e-36 | 139 |
MS.gene97223.t1 | AT2G26690 | 33.564 | 289 | 181 | 6 | 61 | 344 | 2 | 284 | 1.56e-35 | 139 |
MS.gene97223.t1 | AT1G18880 | 31.690 | 284 | 185 | 6 | 41 | 322 | 22 | 298 | 1.92e-35 | 139 |
MS.gene97223.t1 | AT1G22570 | 36.885 | 244 | 141 | 4 | 47 | 282 | 2 | 240 | 2.46e-35 | 138 |
MS.gene97223.t1 | AT1G22570 | 28.750 | 160 | 75 | 4 | 311 | 431 | 342 | 501 | 1.03e-12 | 70.5 |
MS.gene97223.t1 | AT3G45690 | 29.730 | 259 | 173 | 2 | 39 | 296 | 19 | 269 | 4.35e-35 | 137 |
MS.gene97223.t1 | AT1G68570 | 31.203 | 266 | 178 | 3 | 50 | 314 | 5 | 266 | 3.39e-34 | 135 |
MS.gene97223.t1 | AT5G28470 | 28.839 | 267 | 187 | 1 | 24 | 290 | 3 | 266 | 7.61e-34 | 134 |
MS.gene97223.t1 | AT1G27080 | 32.308 | 260 | 171 | 3 | 30 | 288 | 6 | 261 | 7.67e-34 | 134 |
MS.gene97223.t1 | AT5G28470 | 28.839 | 267 | 187 | 1 | 24 | 290 | 3 | 266 | 8.45e-34 | 134 |
MS.gene97223.t1 | AT1G69850 | 32.549 | 255 | 155 | 4 | 30 | 278 | 17 | 260 | 7.02e-33 | 132 |
MS.gene97223.t1 | AT5G62680 | 27.839 | 273 | 190 | 3 | 18 | 289 | 26 | 292 | 1.03e-32 | 131 |
MS.gene97223.t1 | AT3G45710 | 29.457 | 258 | 174 | 1 | 37 | 294 | 20 | 269 | 1.62e-32 | 130 |
MS.gene97223.t1 | AT1G52190 | 31.373 | 306 | 198 | 5 | 14 | 315 | 3 | 300 | 3.25e-32 | 130 |
MS.gene97223.t1 | AT3G45680 | 28.839 | 267 | 182 | 1 | 36 | 302 | 18 | 276 | 3.92e-32 | 129 |
MS.gene97223.t1 | AT3G45650 | 28.517 | 263 | 180 | 1 | 29 | 291 | 13 | 267 | 9.90e-32 | 128 |
MS.gene97223.t1 | AT3G45650 | 28.517 | 263 | 180 | 1 | 29 | 291 | 13 | 267 | 1.28e-31 | 128 |
MS.gene97223.t1 | AT3G45720 | 28.417 | 278 | 190 | 2 | 21 | 297 | 2 | 271 | 1.91e-31 | 127 |
MS.gene97223.t1 | AT3G25260 | 27.273 | 264 | 177 | 3 | 17 | 280 | 2 | 250 | 4.29e-31 | 125 |
MS.gene97223.t1 | AT5G62730 | 34.000 | 250 | 139 | 6 | 30 | 275 | 48 | 275 | 7.15e-31 | 126 |
MS.gene97223.t1 | AT3G16180 | 30.909 | 275 | 181 | 4 | 15 | 287 | 5 | 272 | 8.57e-31 | 125 |
MS.gene97223.t1 | AT3G47960 | 30.081 | 246 | 168 | 2 | 41 | 286 | 64 | 305 | 1.01e-30 | 125 |
MS.gene97223.t1 | AT1G59740 | 29.603 | 277 | 190 | 3 | 14 | 289 | 18 | 290 | 2.27e-30 | 124 |
MS.gene97223.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 37 | 303 | 20 | 278 | 8.33e-30 | 122 |
MS.gene97223.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 37 | 303 | 20 | 278 | 8.33e-30 | 122 |
MS.gene97223.t1 | AT3G45660 | 27.715 | 267 | 185 | 1 | 37 | 303 | 41 | 299 | 1.06e-29 | 122 |
MS.gene97223.t1 | AT5G62730 | 34.894 | 235 | 127 | 6 | 45 | 275 | 4 | 216 | 1.11e-29 | 122 |
MS.gene97223.t1 | AT3G45700 | 28.175 | 252 | 173 | 1 | 40 | 291 | 18 | 261 | 3.00e-29 | 120 |
MS.gene97223.t1 | AT3G21670 | 34.109 | 258 | 162 | 4 | 37 | 289 | 27 | 281 | 6.49e-29 | 120 |
MS.gene97223.t1 | AT3G21670 | 29.146 | 199 | 95 | 4 | 311 | 473 | 386 | 574 | 8.56e-15 | 77.4 |
MS.gene97223.t1 | AT1G72130 | 23.472 | 409 | 202 | 10 | 149 | 450 | 8 | 412 | 6.39e-28 | 115 |
MS.gene97223.t1 | AT1G72130 | 23.472 | 409 | 202 | 10 | 149 | 450 | 8 | 412 | 6.39e-28 | 115 |
MS.gene97223.t1 | AT5G14940 | 29.555 | 247 | 150 | 4 | 37 | 271 | 6 | 240 | 2.43e-26 | 112 |
MS.gene97223.t1 | AT5G14940 | 23.037 | 191 | 107 | 3 | 311 | 461 | 359 | 549 | 5.43e-14 | 74.7 |
MS.gene97223.t1 | AT1G33440 | 29.861 | 288 | 190 | 4 | 30 | 314 | 30 | 308 | 5.57e-26 | 111 |
MS.gene97223.t1 | AT1G33440 | 34.884 | 172 | 70 | 4 | 319 | 450 | 398 | 567 | 9.98e-19 | 89.7 |
MS.gene97223.t1 | AT1G27080 | 31.839 | 223 | 147 | 3 | 67 | 288 | 1 | 219 | 1.45e-25 | 110 |
MS.gene97223.t1 | AT3G25280 | 26.894 | 264 | 180 | 3 | 30 | 293 | 13 | 263 | 2.50e-25 | 109 |
MS.gene97223.t1 | AT1G27040 | 30.645 | 248 | 168 | 2 | 30 | 276 | 19 | 263 | 3.18e-25 | 109 |
MS.gene97223.t1 | AT1G27040 | 30.645 | 248 | 168 | 2 | 30 | 276 | 15 | 259 | 3.43e-25 | 108 |
MS.gene97223.t1 | AT1G69860 | 29.388 | 245 | 158 | 4 | 41 | 278 | 21 | 257 | 2.58e-24 | 106 |
MS.gene97223.t1 | AT3G01350 | 29.130 | 230 | 142 | 3 | 37 | 257 | 6 | 223 | 1.90e-23 | 103 |
MS.gene97223.t1 | AT5G46050 | 33.333 | 192 | 121 | 4 | 126 | 314 | 3 | 190 | 1.91e-23 | 103 |
MS.gene97223.t1 | AT5G46050 | 27.363 | 201 | 105 | 3 | 311 | 470 | 269 | 469 | 2.82e-13 | 72.0 |
MS.gene97223.t1 | AT1G27040 | 30.702 | 228 | 154 | 2 | 50 | 276 | 7 | 231 | 9.94e-23 | 101 |
MS.gene97223.t1 | AT2G38100 | 25.573 | 262 | 170 | 7 | 56 | 315 | 15 | 253 | 2.38e-12 | 69.3 |
MS.gene97223.t1 | AT2G38100 | 25.397 | 252 | 164 | 6 | 66 | 315 | 2 | 231 | 2.42e-12 | 69.3 |
MS.gene97223.t1 | AT2G38100 | 25.573 | 262 | 170 | 7 | 56 | 315 | 9 | 247 | 2.50e-12 | 69.3 |
Find 133 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCTTAGTGATTCTTAT+TGG | 0.218343 | 7.3:+84290725 | MS.gene97223:CDS |
CTTTCAGCTCTTCTTTGTTC+TGG | 0.227633 | 7.3:+84290771 | MS.gene97223:CDS |
AATCTTTCTGCTTCCTTTGA+TGG | 0.235148 | 7.3:-84291552 | None:intergenic |
ATTCTATTTGTCAATATATA+TGG | 0.239456 | 7.3:+84291133 | MS.gene97223:CDS |
CATTCATTGATGCAGGGTTT+AGG | 0.255802 | 7.3:+84291011 | MS.gene97223:intron |
CTAGCAACACTGGCATTCTT+TGG | 0.268041 | 7.3:+84290586 | MS.gene97223:CDS |
ATTCCTTAGTGATTCTTATT+GGG | 0.273297 | 7.3:+84290726 | MS.gene97223:CDS |
TATATGGTTGCATTTGGATA+TGG | 0.287046 | 7.3:+84291149 | MS.gene97223:CDS |
ATTCATTGATGCAGGGTTTA+GGG | 0.288312 | 7.3:+84291012 | MS.gene97223:intron |
ATAGAAGGAAATCATGTTAA+TGG | 0.295194 | 7.3:+84290393 | MS.gene97223:CDS |
GACCAACTTTACGAGGTTAT+TGG | 0.308854 | 7.3:+84291518 | MS.gene97223:CDS |
TCAATATATATGGTTGCATT+TGG | 0.313334 | 7.3:+84291143 | MS.gene97223:CDS |
TTCCTTTGATGGCGGATTCA+TGG | 0.319338 | 7.3:-84291541 | None:intergenic |
TCCTGTCATAAGAGTAATTC+AGG | 0.322552 | 7.3:+84291448 | MS.gene97223:CDS |
TGCCCAACATTCAAGTTATT+CGG | 0.332934 | 7.3:-84292565 | None:intergenic |
TTGGTTTATTATGAAGATTC+CGG | 0.335994 | 7.3:+84291320 | MS.gene97223:CDS |
GACATATGTACCTTATATCT+TGG | 0.347941 | 7.3:-84291583 | None:intergenic |
GTTAATGGAAAAGTGGCAAT+TGG | 0.353174 | 7.3:+84290408 | MS.gene97223:CDS |
TTCTGCATTCCCAAGATATA+AGG | 0.359004 | 7.3:+84291573 | MS.gene97223:CDS |
CTGTTATTGATCAAACCATT+AGG | 0.361766 | 7.3:+84291056 | MS.gene97223:CDS |
CTTGACGAAGGACTCTTGTT+AGG | 0.368596 | 7.3:-84290633 | None:intergenic |
CTTTGGAGTTGGAGTGAACT+TGG | 0.368786 | 7.3:+84290603 | MS.gene97223:CDS |
CACTGCTAAAGGCGAAGAAC+CGG | 0.369409 | 7.3:+84292534 | MS.gene97223:CDS |
CAACCTACCTTAGCAACCTT+TGG | 0.375413 | 7.3:+84291179 | MS.gene97223:CDS |
ATCTTCATAATAAACCAAAA+TGG | 0.378774 | 7.3:-84291315 | None:intergenic |
CAATCGCTTCATCGTCCTCT+TGG | 0.393715 | 7.3:-84292708 | None:intergenic |
CAAGTTCTTGTTCCCTTGGC+CGG | 0.396582 | 7.3:+84292172 | MS.gene97223:CDS |
TGAAGTTCGCTTATCCCCTT+AGG | 0.399055 | 7.3:-84292211 | None:intergenic |
ATTCCACAGTATGTTCTTGT+TGG | 0.400555 | 7.3:+84292358 | MS.gene97223:CDS |
GTTCTGTGCTCGGTGGTACA+AGG | 0.406351 | 7.3:+84292648 | MS.gene97223:CDS |
GGTATGTGGACGTTGGGTTT+CGG | 0.415369 | 7.3:+84291341 | MS.gene97223:CDS |
ATGGGAGTTGGCCTAGTTAT+CGG | 0.422212 | 7.3:+84292238 | MS.gene97223:CDS |
TCGTCAAGTTCTTGTTCCCT+TGG | 0.427315 | 7.3:+84292168 | MS.gene97223:CDS |
TGTTCATTACCGCAACCTAA+TGG | 0.427677 | 7.3:-84291071 | None:intergenic |
TCAGCTGCTTCAATCTTGTC+AGG | 0.428990 | 7.3:-84289723 | None:intergenic |
AAATTAAAATAGGTGATAGA+AGG | 0.440132 | 7.3:+84290378 | MS.gene97223:intron |
TCGTCGCTGCCGCTAGGAAG+TGG | 0.444967 | 7.3:+84291474 | MS.gene97223:CDS |
CGAAGTTGGTTCGTTGCAAA+CGG | 0.447191 | 7.3:-84291096 | None:intergenic |
CAAAGAATGCCAGTGTTGCT+AGG | 0.448186 | 7.3:-84290585 | None:intergenic |
TAAAGTTGGTCCTCCTTGGC+AGG | 0.448949 | 7.3:-84291506 | None:intergenic |
TACCGAATAACTTGAATGTT+GGG | 0.450616 | 7.3:+84292563 | MS.gene97223:CDS |
TGCAACGAACCAACTTCGTT+GGG | 0.450911 | 7.3:+84291101 | MS.gene97223:CDS |
CTGGTGCAACGGAGTTTGTA+AGG | 0.457926 | 7.3:+84292281 | MS.gene97223:CDS |
TTGCAACGAACCAACTTCGT+TGG | 0.459621 | 7.3:+84291100 | MS.gene97223:CDS |
GAACCAACTTCGTTGGGAAC+AGG | 0.460262 | 7.3:+84291107 | MS.gene97223:CDS |
ACACTGGCATTCTTTGGAGT+TGG | 0.461540 | 7.3:+84290592 | MS.gene97223:CDS |
ACATATGTACCTTATATCTT+GGG | 0.462362 | 7.3:-84291582 | None:intergenic |
GCCTTGATTTCATTCTTAGC+AGG | 0.466900 | 7.3:+84291389 | MS.gene97223:CDS |
GATTCCGGTATGTGGACGTT+GGG | 0.474446 | 7.3:+84291335 | MS.gene97223:CDS |
AAAATTAAGTGGTAATCCTA+AGG | 0.475355 | 7.3:+84292195 | MS.gene97223:CDS |
CTCGTAAAGTTGGTCCTCCT+TGG | 0.477703 | 7.3:-84291510 | None:intergenic |
ATAATAAACCAAAATGGTGT+TGG | 0.477746 | 7.3:-84291309 | None:intergenic |
GATAAGCGAACTTCAAAGAA+TGG | 0.480783 | 7.3:+84292219 | MS.gene97223:CDS |
TCGAAGATATCGTTATGTTA+AGG | 0.483894 | 7.3:+84291415 | MS.gene97223:CDS |
TGTAGTGTCCTTGTATGTAC+TGG | 0.486453 | 7.3:+84292139 | MS.gene97223:intron |
TCCTGCTAAGAATGAAATCA+AGG | 0.489901 | 7.3:-84291390 | None:intergenic |
AACAATGTCAGCAAGTGGAC+TGG | 0.495272 | 7.3:+84290673 | MS.gene97223:CDS |
TTAATGGAAAAGTGGCAATT+GGG | 0.497820 | 7.3:+84290409 | MS.gene97223:CDS |
ACCTGAATTACTCTTATGAC+AGG | 0.498448 | 7.3:-84291449 | None:intergenic |
TCGTCTACGTGTTCTGTGCT+CGG | 0.499189 | 7.3:+84292638 | MS.gene97223:CDS |
GGCCAATAACCTCGTAAAGT+TGG | 0.501483 | 7.3:-84291520 | None:intergenic |
TATATATTGACAAATAGAAT+AGG | 0.502301 | 7.3:-84291130 | None:intergenic |
AAGTTATTCGGTATCCATCC+CGG | 0.505472 | 7.3:-84292553 | None:intergenic |
ATTATGAAGATTCCGGTATG+TGG | 0.513063 | 7.3:+84291327 | MS.gene97223:CDS |
CCCTTGGCCGGAAAATTAAG+TGG | 0.513372 | 7.3:+84292184 | MS.gene97223:CDS |
TTGATCAAACCATTAGGTTG+CGG | 0.514440 | 7.3:+84291062 | MS.gene97223:CDS |
ACATGTTATGCCGGGAGAGA+AGG | 0.515883 | 7.3:+84292309 | MS.gene97223:CDS |
ATACCGAATAACTTGAATGT+TGG | 0.527198 | 7.3:+84292562 | MS.gene97223:CDS |
TTCTGTGCTCGGTGGTACAA+GGG | 0.528036 | 7.3:+84292649 | MS.gene97223:CDS |
ATCAAATTGATCAGCTCCAA+AGG | 0.528289 | 7.3:-84291195 | None:intergenic |
GAAACCCAACGTCCACATAC+CGG | 0.528818 | 7.3:-84291339 | None:intergenic |
TGAATGTTGGGCACATGGAT+TGG | 0.529142 | 7.3:+84292575 | MS.gene97223:CDS |
TAACTTGAATGTTGGGCACA+TGG | 0.530856 | 7.3:+84292570 | MS.gene97223:CDS |
GTGGCAATTGGGAAGAGTAA+AGG | 0.531735 | 7.3:+84290420 | MS.gene97223:CDS |
TATCGTTATGTTAAGGCGTG+TGG | 0.532404 | 7.3:+84291422 | MS.gene97223:CDS |
CTTTCTGCTTCCTTTGATGG+CGG | 0.532701 | 7.3:-84291549 | None:intergenic |
TTGGGAAGAGTAAAGGAGGA+TGG | 0.532777 | 7.3:+84290427 | MS.gene97223:CDS |
AAGGGCGTCAATAACTTTGA+AGG | 0.533090 | 7.3:+84292667 | MS.gene97223:CDS |
AGGCCTGTTCCCAACGAAGT+TGG | 0.534570 | 7.3:-84291110 | None:intergenic |
AAGGCTAAAACATGTTATGC+CGG | 0.535790 | 7.3:+84292300 | MS.gene97223:CDS |
TCGCAAACATTCCGATAACT+AGG | 0.538544 | 7.3:-84292249 | None:intergenic |
AAAGAATGCCAGTGTTGCTA+GGG | 0.541114 | 7.3:-84290584 | None:intergenic |
TTCCTTAGTGATTCTTATTG+GGG | 0.541192 | 7.3:+84290727 | MS.gene97223:CDS |
AAAGAACTAGCCTTCTCTCC+CGG | 0.541210 | 7.3:-84292319 | None:intergenic |
ATGGTTGCATTTGGATATGG+AGG | 0.541387 | 7.3:+84291152 | MS.gene97223:CDS |
GGCCATGAATCCGCCATCAA+AGG | 0.542013 | 7.3:+84291539 | MS.gene97223:CDS |
AGGTCTTCGTCGCTGCCGCT+AGG | 0.543408 | 7.3:+84291468 | MS.gene97223:CDS |
AAATTAAGTGGTAATCCTAA+GGG | 0.543683 | 7.3:+84292196 | MS.gene97223:CDS |
GCAGATGTCACCAGCAGGAT+CGG | 0.544233 | 7.3:+84289680 | MS.gene97223:intron |
TTCCCCAATAAGAATCACTA+AGG | 0.545318 | 7.3:-84290729 | None:intergenic |
TAATCAAGCCCTAGCAACAC+TGG | 0.546374 | 7.3:+84290576 | MS.gene97223:CDS |
AAATCATGTTAATGGAAAAG+TGG | 0.547233 | 7.3:+84290401 | MS.gene97223:CDS |
ATCAGCTCCAAAGGTTGCTA+AGG | 0.551652 | 7.3:-84291186 | None:intergenic |
ATGTTTGCGATGGTTGCAGC+TGG | 0.554672 | 7.3:+84292262 | MS.gene97223:CDS |
AGGCTAAAACATGTTATGCC+GGG | 0.557548 | 7.3:+84292301 | MS.gene97223:CDS |
ATAAGCGAACTTCAAAGAAT+GGG | 0.559609 | 7.3:+84292220 | MS.gene97223:CDS |
GCTGACATTGTTAGCAGCCT+CGG | 0.566694 | 7.3:-84290662 | None:intergenic |
TAGGAGGCGACCGATCCTGC+TGG | 0.574752 | 7.3:-84289690 | None:intergenic |
ATCGTTATGTTAAGGCGTGT+GGG | 0.575039 | 7.3:+84291423 | MS.gene97223:CDS |
TTTGAAGGTAGTGTGAATCT+CGG | 0.576329 | 7.3:+84292682 | MS.gene97223:CDS |
GCAATTGGGAAGAGTAAAGG+AGG | 0.579422 | 7.3:+84290423 | MS.gene97223:CDS |
CACAGAACACGTAGACGACA+AGG | 0.586767 | 7.3:-84292633 | None:intergenic |
GCTCCAAAGGTTGCTAAGGT+AGG | 0.588042 | 7.3:-84291182 | None:intergenic |
GTCAGGATTGACAGTGTAGG+AGG | 0.589139 | 7.3:-84289706 | None:intergenic |
AAAACTGCATACATCTTGCT+AGG | 0.589781 | 7.3:+84290450 | MS.gene97223:CDS |
TGGTTGCATTTGGATATGGA+GGG | 0.593151 | 7.3:+84291153 | MS.gene97223:CDS |
TCAAAACACTTACTCGAGAG+AGG | 0.595006 | 7.3:+84291238 | MS.gene97223:CDS |
ACTGCTAAAGGCGAAGAACC+GGG | 0.601970 | 7.3:+84292535 | MS.gene97223:CDS |
GTGATGACAGTCACTGCTAA+AGG | 0.603223 | 7.3:+84292523 | MS.gene97223:CDS |
GAACTTCAAAGAATGGGAGT+TGG | 0.604352 | 7.3:+84292226 | MS.gene97223:CDS |
AGATTCCGGTATGTGGACGT+TGG | 0.605482 | 7.3:+84291334 | MS.gene97223:CDS |
GATAAAGTCCAGTACATACA+AGG | 0.608027 | 7.3:-84292147 | None:intergenic |
GAGCACTTAGCGCTGCGAGG+AGG | 0.608956 | 7.3:-84292606 | None:intergenic |
CTGCTAACAATGTCAGCAAG+TGG | 0.612210 | 7.3:+84290668 | MS.gene97223:CDS |
TGTATGCAGATGTCACCAGC+AGG | 0.613543 | 7.3:+84289675 | MS.gene97223:intron |
CAAGGAGGACCAACTTTACG+AGG | 0.615767 | 7.3:+84291511 | MS.gene97223:CDS |
GTGGAATGTTGAACCTGCCA+AGG | 0.619345 | 7.3:+84291493 | MS.gene97223:CDS |
TGACAAGATTGAAGCAGCTG+AGG | 0.620999 | 7.3:+84289725 | MS.gene97223:CDS |
AGTTATCGGAATGTTTGCGA+TGG | 0.624323 | 7.3:+84292252 | MS.gene97223:CDS |
CTAAAGGCGAAGAACCGGGA+TGG | 0.629833 | 7.3:+84292539 | MS.gene97223:CDS |
AAATTATGTTAGCAGCATGA+TGG | 0.629907 | 7.3:+84292492 | MS.gene97223:intron |
CTTGTCAGGATTGACAGTGT+AGG | 0.634509 | 7.3:-84289709 | None:intergenic |
GATGGTTGCAGCTGGTGCAA+CGG | 0.642766 | 7.3:+84292270 | MS.gene97223:CDS |
AATCAAGGCTATAATAGCAG+AGG | 0.651729 | 7.3:-84291375 | None:intergenic |
AATTAAGTGGTAATCCTAAG+GGG | 0.654690 | 7.3:+84292197 | MS.gene97223:CDS |
GAATGTTGAACCTGCCAAGG+AGG | 0.661909 | 7.3:+84291496 | MS.gene97223:CDS |
TAAGAGCACTTAGCGCTGCG+AGG | 0.667558 | 7.3:-84292609 | None:intergenic |
TCTACGTGTTCTGTGCTCGG+TGG | 0.678153 | 7.3:+84292641 | MS.gene97223:CDS |
TGTGAATCTCGGAAGCCAAG+AGG | 0.678778 | 7.3:+84292693 | MS.gene97223:CDS |
TTCAACATTCCACTTCCTAG+CGG | 0.680521 | 7.3:-84291483 | None:intergenic |
CCTCGGCACTGTCTTGACGA+AGG | 0.687136 | 7.3:-84290645 | None:intergenic |
GCACCAACAAGAACATACTG+TGG | 0.687478 | 7.3:-84292361 | None:intergenic |
CCTTCGTCAAGACAGTGCCG+AGG | 0.707927 | 7.3:+84290645 | MS.gene97223:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAAAAATAAATTAAAAT+AGG | + | chr7.3:84290368-84290387 | MS.gene97223:intron | 0.0% |
!! | ATTAATCATGAATTAATAAA+TGG | + | chr7.3:84290972-84290991 | MS.gene97223:intron | 10.0% |
!!! | TAATAAGATAATAATTTTTC+GGG | - | chr7.3:84290222-84290241 | None:intergenic | 10.0% |
!!! | TATTAATTTATGATTTTCTT+GGG | + | chr7.3:84290174-84290193 | MS.gene97223:intron | 10.0% |
!!! | TTATTAATTTATGATTTTCT+TGG | + | chr7.3:84290173-84290192 | MS.gene97223:intron | 10.0% |
!! | ATTCTATTTGTCAATATATA+TGG | + | chr7.3:84291133-84291152 | MS.gene97223:CDS | 15.0% |
!! | TATATATTGACAAATAGAAT+AGG | - | chr7.3:84291133-84291152 | None:intergenic | 15.0% |
!! | TCATTATCAATATATATACA+TGG | + | chr7.3:84290505-84290524 | MS.gene97223:intron | 15.0% |
!! | TCTAAATTAATAAATTTCTC+TGG | - | chr7.3:84289889-84289908 | None:intergenic | 15.0% |
!!! | AAACTCTTTAATTTAATACT+CGG | - | chr7.3:84290326-84290345 | None:intergenic | 15.0% |
!!! | AGTTTTTCAATTTTTTACAT+TGG | + | chr7.3:84290250-84290269 | MS.gene97223:intron | 15.0% |
!!! | TCTAAAATAATAAATTTGTC+CGG | - | chr7.3:84290288-84290307 | None:intergenic | 15.0% |
!! | AAATTAAAATAGGTGATAGA+AGG | + | chr7.3:84290378-84290397 | MS.gene97223:intron | 20.0% |
!! | ATCTTCATAATAAACCAAAA+TGG | - | chr7.3:84291318-84291337 | None:intergenic | 20.0% |
!! | ATGAATGCAATATTATCTTA+TGG | + | chr7.3:84289632-84289651 | MS.gene97223:intron | 20.0% |
!! | CTCTATAAATTAATAATGTC+AGG | + | chr7.3:84289862-84289881 | MS.gene97223:intron | 20.0% |
!! | TCAACTCAACATATATATAA+AGG | - | chr7.3:84291862-84291881 | None:intergenic | 20.0% |
!! | TTAATTGTTCAACAACTATA+AGG | - | chr7.3:84290945-84290964 | None:intergenic | 20.0% |
!! | TTGTAATTAAATGAACTAAG+TGG | + | chr7.3:84290531-84290550 | MS.gene97223:intron | 20.0% |
! | AAAATTAAGTGGTAATCCTA+AGG | + | chr7.3:84292195-84292214 | MS.gene97223:CDS | 25.0% |
! | AAATCATGTTAATGGAAAAG+TGG | + | chr7.3:84290401-84290420 | MS.gene97223:CDS | 25.0% |
! | AAATTAAGTGGTAATCCTAA+GGG | + | chr7.3:84292196-84292215 | MS.gene97223:CDS | 25.0% |
! | ACATATGTACCTTATATCTT+GGG | - | chr7.3:84291585-84291604 | None:intergenic | 25.0% |
! | ATAATAAACCAAAATGGTGT+TGG | - | chr7.3:84291312-84291331 | None:intergenic | 25.0% |
! | ATAGAAGGAAATCATGTTAA+TGG | + | chr7.3:84290393-84290412 | MS.gene97223:CDS | 25.0% |
! | ATGCAATATTATCTTATGGA+TGG | + | chr7.3:84289636-84289655 | MS.gene97223:intron | 25.0% |
! | ATTCCTTAGTGATTCTTATT+GGG | + | chr7.3:84290726-84290745 | MS.gene97223:CDS | 25.0% |
! | GTTAGTTAGTTAGTTATTCT+TGG | + | chr7.3:84289751-84289770 | MS.gene97223:intron | 25.0% |
! | TCAATATATATGGTTGCATT+TGG | + | chr7.3:84291143-84291162 | MS.gene97223:CDS | 25.0% |
! | TTGGTTTATTATGAAGATTC+CGG | + | chr7.3:84291320-84291339 | MS.gene97223:CDS | 25.0% |
!!! | GTTTACATTTTTTCACTCTT+GGG | + | chr7.3:84290700-84290719 | MS.gene97223:CDS | 25.0% |
!!! | TGTTTACATTTTTTCACTCT+TGG | + | chr7.3:84290699-84290718 | MS.gene97223:CDS | 25.0% |
AAATTATGTTAGCAGCATGA+TGG | + | chr7.3:84292492-84292511 | MS.gene97223:intron | 30.0% | |
AATTAAGTGGTAATCCTAAG+GGG | + | chr7.3:84292197-84292216 | MS.gene97223:CDS | 30.0% | |
ACTGTACATACCAAACAAAA+AGG | + | chr7.3:84289969-84289988 | MS.gene97223:intron | 30.0% | |
AGTTTCTACTGTATAATGTC+TGG | + | chr7.3:84290341-84290360 | MS.gene97223:intron | 30.0% | |
ATAAGCGAACTTCAAAGAAT+GGG | + | chr7.3:84292220-84292239 | MS.gene97223:CDS | 30.0% | |
ATACCGAATAACTTGAATGT+TGG | + | chr7.3:84292562-84292581 | MS.gene97223:CDS | 30.0% | |
ATATATGCATTCATTGATGC+AGG | + | chr7.3:84291004-84291023 | MS.gene97223:intron | 30.0% | |
CATTCCTTAGTGATTCTTAT+TGG | + | chr7.3:84290725-84290744 | MS.gene97223:CDS | 30.0% | |
CTGTTATTGATCAAACCATT+AGG | + | chr7.3:84291056-84291075 | MS.gene97223:CDS | 30.0% | |
GACACTACATATATCAAACA+CGG | - | chr7.3:84292128-84292147 | None:intergenic | 30.0% | |
GACATATGTACCTTATATCT+TGG | - | chr7.3:84291586-84291605 | None:intergenic | 30.0% | |
GTACAGTAAATGTAAACAAG+AGG | + | chr7.3:84290100-84290119 | MS.gene97223:intron | 30.0% | |
TACCGAATAACTTGAATGTT+GGG | + | chr7.3:84292563-84292582 | MS.gene97223:CDS | 30.0% | |
TATATGCATTCATTGATGCA+GGG | + | chr7.3:84291005-84291024 | MS.gene97223:intron | 30.0% | |
TATATGGTTGCATTTGGATA+TGG | + | chr7.3:84291149-84291168 | MS.gene97223:CDS | 30.0% | |
TATCATTCTCAACACACATT+TGG | - | chr7.3:84291981-84292000 | None:intergenic | 30.0% | |
TCGAAGATATCGTTATGTTA+AGG | + | chr7.3:84291415-84291434 | MS.gene97223:CDS | 30.0% | |
TTAATGGAAAAGTGGCAATT+GGG | + | chr7.3:84290409-84290428 | MS.gene97223:CDS | 30.0% | |
TTCCTTAGTGATTCTTATTG+GGG | + | chr7.3:84290727-84290746 | MS.gene97223:CDS | 30.0% | |
TTGGGACCGAAAATTATAAA+GGG | + | chr7.3:84290192-84290211 | MS.gene97223:intron | 30.0% | |
! | AGGATTACCACTTAATTTTC+CGG | - | chr7.3:84292194-84292213 | None:intergenic | 30.0% |
! | GGAGATCCCTTTATAATTTT+CGG | - | chr7.3:84290201-84290220 | None:intergenic | 30.0% |
! | TCAGAAGTTTTTGTGTATGT+GGG | + | chr7.3:84292385-84292404 | MS.gene97223:intron | 30.0% |
! | TTCAGAAGTTTTTGTGTATG+TGG | + | chr7.3:84292384-84292403 | MS.gene97223:intron | 30.0% |
! | TTTTACTTTGCACTCAATGT+TGG | + | chr7.3:84291275-84291294 | MS.gene97223:CDS | 30.0% |
!! | GACTAATTTGCCTTTTTGTT+TGG | - | chr7.3:84289982-84290001 | None:intergenic | 30.0% |
!!! | TTTTTTACATTGGCCCAATT+CGG | + | chr7.3:84290260-84290279 | MS.gene97223:intron | 30.0% |
AAAACTGCATACATCTTGCT+AGG | + | chr7.3:84290450-84290469 | MS.gene97223:CDS | 35.0% | |
AAGGCTAAAACATGTTATGC+CGG | + | chr7.3:84292300-84292319 | MS.gene97223:CDS | 35.0% | |
AATCAAGGCTATAATAGCAG+AGG | - | chr7.3:84291378-84291397 | None:intergenic | 35.0% | |
AATCTTTCTGCTTCCTTTGA+TGG | - | chr7.3:84291555-84291574 | None:intergenic | 35.0% | |
ACATATATCAAACACGGACA+TGG | - | chr7.3:84292122-84292141 | None:intergenic | 35.0% | |
ACCTGAATTACTCTTATGAC+AGG | - | chr7.3:84291452-84291471 | None:intergenic | 35.0% | |
ACTACTGTGTTCATATGCAT+TGG | + | chr7.3:84290056-84290075 | MS.gene97223:intron | 35.0% | |
AGGCGATGTAATGAACAATA+AGG | + | chr7.3:84292069-84292088 | MS.gene97223:intron | 35.0% | |
ATCAAATTGATCAGCTCCAA+AGG | - | chr7.3:84291198-84291217 | None:intergenic | 35.0% | |
ATGTGTGTTGAGAATGATAC+CGG | + | chr7.3:84291982-84292001 | MS.gene97223:intron | 35.0% | |
ATTATGAAGATTCCGGTATG+TGG | + | chr7.3:84291327-84291346 | MS.gene97223:CDS | 35.0% | |
ATTCATTGATGCAGGGTTTA+GGG | + | chr7.3:84291012-84291031 | MS.gene97223:intron | 35.0% | |
ATTCCACAGTATGTTCTTGT+TGG | + | chr7.3:84292358-84292377 | MS.gene97223:CDS | 35.0% | |
CTCTGTTGTATTCACACAAA+TGG | + | chr7.3:84292027-84292046 | MS.gene97223:intron | 35.0% | |
CTTGGGACCGAAAATTATAA+AGG | + | chr7.3:84290191-84290210 | MS.gene97223:intron | 35.0% | |
GATAAAGTCCAGTACATACA+AGG | - | chr7.3:84292150-84292169 | None:intergenic | 35.0% | |
GATAAGCGAACTTCAAAGAA+TGG | + | chr7.3:84292219-84292238 | MS.gene97223:CDS | 35.0% | |
GATGTAATGAACAATAAGGC+AGG | + | chr7.3:84292073-84292092 | MS.gene97223:intron | 35.0% | |
GTTAATGGAAAAGTGGCAAT+TGG | + | chr7.3:84290408-84290427 | MS.gene97223:CDS | 35.0% | |
TCCTGCTAAGAATGAAATCA+AGG | - | chr7.3:84291393-84291412 | None:intergenic | 35.0% | |
TCCTGTCATAAGAGTAATTC+AGG | + | chr7.3:84291448-84291467 | MS.gene97223:CDS | 35.0% | |
TGTATGGCTTCAATTTCTCT+TGG | + | chr7.3:84292469-84292488 | MS.gene97223:intron | 35.0% | |
TTCCCCAATAAGAATCACTA+AGG | - | chr7.3:84290732-84290751 | None:intergenic | 35.0% | |
TTCTGCATTCCCAAGATATA+AGG | + | chr7.3:84291573-84291592 | MS.gene97223:CDS | 35.0% | |
TTTGAAGGTAGTGTGAATCT+CGG | + | chr7.3:84292682-84292701 | MS.gene97223:CDS | 35.0% | |
! | ACTCTTTTCCAACACCATTT+TGG | + | chr7.3:84291301-84291320 | MS.gene97223:CDS | 35.0% |
! | CTTTGGAAGTTCACTTTGTA+TGG | + | chr7.3:84292453-84292472 | MS.gene97223:intron | 35.0% |
! | TCCTTGACTTGATTCGAAAA+TGG | - | chr7.3:84289795-84289814 | None:intergenic | 35.0% |
! | TGCCCAACATTCAAGTTATT+CGG | - | chr7.3:84292568-84292587 | None:intergenic | 35.0% |
! | TTGATCAAACCATTAGGTTG+CGG | + | chr7.3:84291062-84291081 | MS.gene97223:CDS | 35.0% |
! | TTGTACTGTAACTCAAGTTG+AGG | + | chr7.3:84291952-84291971 | MS.gene97223:intron | 35.0% |
! | TTTTTACATTGGCCCAATTC+GGG | + | chr7.3:84290261-84290280 | MS.gene97223:intron | 35.0% |
AAGTTATTCGGTATCCATCC+CGG | - | chr7.3:84292556-84292575 | None:intergenic | 40.0% | |
AATTACGTTGCAGCGAACAT+TGG | + | chr7.3:84290014-84290033 | MS.gene97223:intron | 40.0% | |
AGGCTAAAACATGTTATGCC+GGG | + | chr7.3:84292301-84292320 | MS.gene97223:CDS | 40.0% | |
AGTTATCGGAATGTTTGCGA+TGG | + | chr7.3:84292252-84292271 | MS.gene97223:CDS | 40.0% | |
ATAATAGTGCACAGCCAAAC+CGG | - | chr7.3:84292004-84292023 | None:intergenic | 40.0% | |
ATCGTTATGTTAAGGCGTGT+GGG | + | chr7.3:84291423-84291442 | MS.gene97223:CDS | 40.0% | |
ATGGTTGCATTTGGATATGG+AGG | + | chr7.3:84291152-84291171 | MS.gene97223:CDS | 40.0% | |
ATTACGTTGCAGCGAACATT+GGG | + | chr7.3:84290015-84290034 | MS.gene97223:intron | 40.0% | |
CATTCATTGATGCAGGGTTT+AGG | + | chr7.3:84291011-84291030 | MS.gene97223:intron | 40.0% | |
CCTGATGGCATAAAAAGCTT+TGG | + | chr7.3:84292436-84292455 | MS.gene97223:intron | 40.0% | |
CTTTCAGCTCTTCTTTGTTC+TGG | + | chr7.3:84290771-84290790 | MS.gene97223:CDS | 40.0% | |
GAACTTCAAAGAATGGGAGT+TGG | + | chr7.3:84292226-84292245 | MS.gene97223:CDS | 40.0% | |
GACCAACTTTACGAGGTTAT+TGG | + | chr7.3:84291518-84291537 | MS.gene97223:CDS | 40.0% | |
GCCTTGATTTCATTCTTAGC+AGG | + | chr7.3:84291389-84291408 | MS.gene97223:CDS | 40.0% | |
TAACTTGAATGTTGGGCACA+TGG | + | chr7.3:84292570-84292589 | MS.gene97223:CDS | 40.0% | |
TATCGTTATGTTAAGGCGTG+TGG | + | chr7.3:84291422-84291441 | MS.gene97223:CDS | 40.0% | |
TCAAAACACTTACTCGAGAG+AGG | + | chr7.3:84291238-84291257 | MS.gene97223:CDS | 40.0% | |
TCGCAAACATTCCGATAACT+AGG | - | chr7.3:84292252-84292271 | None:intergenic | 40.0% | |
TGGTTGCATTTGGATATGGA+GGG | + | chr7.3:84291153-84291172 | MS.gene97223:CDS | 40.0% | |
TGTAGTGTCCTTGTATGTAC+TGG | + | chr7.3:84292139-84292158 | MS.gene97223:intron | 40.0% | |
TGTTCATTACCGCAACCTAA+TGG | - | chr7.3:84291074-84291093 | None:intergenic | 40.0% | |
TTCAACATTCCACTTCCTAG+CGG | - | chr7.3:84291486-84291505 | None:intergenic | 40.0% | |
TTGAAAGACGGGAATGAATC+CGG | + | chr7.3:84291914-84291933 | MS.gene97223:intron | 40.0% | |
! | AAAGAATGCCAGTGTTGCTA+GGG | - | chr7.3:84290587-84290606 | None:intergenic | 40.0% |
! | CCAAAGCTTTTTATGCCATC+AGG | - | chr7.3:84292439-84292458 | None:intergenic | 40.0% |
! | GCTTCTCTTTTTGTCGAACA+AGG | + | chr7.3:84292049-84292068 | MS.gene97223:intron | 40.0% |
! | GGCTTTTGTCTTTGACATCA+TGG | + | chr7.3:84291033-84291052 | MS.gene97223:CDS | 40.0% |
! | TGTTGAGAATGATACCGGTT+TGG | + | chr7.3:84291987-84292006 | MS.gene97223:intron | 40.0% |
! | TTTTGTGTATGTGGGTCAGT+TGG | + | chr7.3:84292393-84292412 | MS.gene97223:intron | 40.0% |
!! | AAGGGCGTCAATAACTTTGA+AGG | + | chr7.3:84292667-84292686 | MS.gene97223:CDS | 40.0% |
!! | GCCATTTTCGAATCAAGTCA+AGG | + | chr7.3:84289791-84289810 | MS.gene97223:intron | 40.0% |
!! | TGTTGAGTTGAGCAGATTCA+TGG | + | chr7.3:84291871-84291890 | MS.gene97223:intron | 40.0% |
AAATTTGTCCGGTCCCGAAT+TGG | - | chr7.3:84290277-84290296 | None:intergenic | 45.0% | |
AACAATGTCAGCAAGTGGAC+TGG | + | chr7.3:84290673-84290692 | MS.gene97223:CDS | 45.0% | |
AATTTGTCCGGTCCCGAATT+GGG | - | chr7.3:84290276-84290295 | None:intergenic | 45.0% | |
ATCAGCTCCAAAGGTTGCTA+AGG | - | chr7.3:84291189-84291208 | None:intergenic | 45.0% | |
CAACACGGACATTGAAAGAC+GGG | + | chr7.3:84291903-84291922 | MS.gene97223:intron | 45.0% | |
CAACCTACCTTAGCAACCTT+TGG | + | chr7.3:84291179-84291198 | MS.gene97223:CDS | 45.0% | |
CTAGCAACACTGGCATTCTT+TGG | + | chr7.3:84290586-84290605 | MS.gene97223:CDS | 45.0% | |
CTGCTAACAATGTCAGCAAG+TGG | + | chr7.3:84290668-84290687 | MS.gene97223:CDS | 45.0% | |
CTTGACGAAGGACTCTTGTT+AGG | - | chr7.3:84290636-84290655 | None:intergenic | 45.0% | |
CTTGTCAGGATTGACAGTGT+AGG | - | chr7.3:84289712-84289731 | None:intergenic | 45.0% | |
CTTTCTGCTTCCTTTGATGG+CGG | - | chr7.3:84291552-84291571 | None:intergenic | 45.0% | |
GCAACACGGACATTGAAAGA+CGG | + | chr7.3:84291902-84291921 | MS.gene97223:intron | 45.0% | |
GCAATTGGGAAGAGTAAAGG+AGG | + | chr7.3:84290423-84290442 | MS.gene97223:CDS | 45.0% | |
GCACCAACAAGAACATACTG+TGG | - | chr7.3:84292364-84292383 | None:intergenic | 45.0% | |
GGCCAATAACCTCGTAAAGT+TGG | - | chr7.3:84291523-84291542 | None:intergenic | 45.0% | |
GGTCAGTTGGAGTTCTTCAA+TGG | + | chr7.3:84292406-84292425 | MS.gene97223:intron | 45.0% | |
GTGATGACAGTCACTGCTAA+AGG | + | chr7.3:84292523-84292542 | MS.gene97223:CDS | 45.0% | |
GTGGCAATTGGGAAGAGTAA+AGG | + | chr7.3:84290420-84290439 | MS.gene97223:CDS | 45.0% | |
GTTGAGCAGATTCATGGACA+AGG | + | chr7.3:84291877-84291896 | MS.gene97223:intron | 45.0% | |
TAATCAAGCCCTAGCAACAC+TGG | + | chr7.3:84290576-84290595 | MS.gene97223:CDS | 45.0% | |
TCAGCTGCTTCAATCTTGTC+AGG | - | chr7.3:84289726-84289745 | None:intergenic | 45.0% | |
TCGTCAAGTTCTTGTTCCCT+TGG | + | chr7.3:84292168-84292187 | MS.gene97223:CDS | 45.0% | |
TGAAAGACGGGAATGAATCC+GGG | + | chr7.3:84291915-84291934 | MS.gene97223:intron | 45.0% | |
TGAAGTTCGCTTATCCCCTT+AGG | - | chr7.3:84292214-84292233 | None:intergenic | 45.0% | |
TGAATGTTGGGCACATGGAT+TGG | + | chr7.3:84292575-84292594 | MS.gene97223:CDS | 45.0% | |
TGACAAGATTGAAGCAGCTG+AGG | + | chr7.3:84289725-84289744 | MS.gene97223:CDS | 45.0% | |
TGCAACGAACCAACTTCGTT+GGG | + | chr7.3:84291101-84291120 | MS.gene97223:CDS | 45.0% | |
TTACAGTACAAAGCCGCCAT+TGG | - | chr7.3:84291943-84291962 | None:intergenic | 45.0% | |
TTCAATGGTCAAGCTCCTGA+TGG | + | chr7.3:84292421-84292440 | MS.gene97223:intron | 45.0% | |
TTGCAACGAACCAACTTCGT+TGG | + | chr7.3:84291100-84291119 | MS.gene97223:CDS | 45.0% | |
TTGGGAAGAGTAAAGGAGGA+TGG | + | chr7.3:84290427-84290446 | MS.gene97223:CDS | 45.0% | |
! | ACCACTTAATTTTCCGGCCA+AGG | - | chr7.3:84292188-84292207 | None:intergenic | 45.0% |
! | ATGGGAGTTGGCCTAGTTAT+CGG | + | chr7.3:84292238-84292257 | MS.gene97223:CDS | 45.0% |
! | CAAAGAATGCCAGTGTTGCT+AGG | - | chr7.3:84290588-84290607 | None:intergenic | 45.0% |
! | CCACTTAATTTTCCGGCCAA+GGG | - | chr7.3:84292187-84292206 | None:intergenic | 45.0% |
!! | AAAGAACTAGCCTTCTCTCC+CGG | - | chr7.3:84292322-84292341 | None:intergenic | 45.0% |
!! | ACACTGGCATTCTTTGGAGT+TGG | + | chr7.3:84290592-84290611 | MS.gene97223:CDS | 45.0% |
!! | CGAAGTTGGTTCGTTGCAAA+CGG | - | chr7.3:84291099-84291118 | None:intergenic | 45.0% |
!! | CTTTGGAGTTGGAGTGAACT+TGG | + | chr7.3:84290603-84290622 | MS.gene97223:CDS | 45.0% |
!! | TTCCTTTGATGGCGGATTCA+TGG | - | chr7.3:84291544-84291563 | None:intergenic | 45.0% |
!! | ATATATTAATAATATATGTT+TGG | + | chr7.3:84289825-84289844 | MS.gene97223:intron | 5.0% |
!!! | ATAATAAGATAATAATTTTT+CGG | - | chr7.3:84290223-84290242 | None:intergenic | 5.0% |
ACATGTTATGCCGGGAGAGA+AGG | + | chr7.3:84292309-84292328 | MS.gene97223:CDS | 50.0% | |
ACTGCTAAAGGCGAAGAACC+GGG | + | chr7.3:84292535-84292554 | MS.gene97223:CDS | 50.0% | |
AGATTCCGGTATGTGGACGT+TGG | + | chr7.3:84291334-84291353 | MS.gene97223:CDS | 50.0% | |
ATGAATCCGGGAACCAATGG+CGG | + | chr7.3:84291927-84291946 | MS.gene97223:intron | 50.0% | |
ATGTTTGCGATGGTTGCAGC+TGG | + | chr7.3:84292262-84292281 | MS.gene97223:CDS | 50.0% | |
CAAGGAGGACCAACTTTACG+AGG | + | chr7.3:84291511-84291530 | MS.gene97223:CDS | 50.0% | |
CAAGTTCTTGTTCCCTTGGC+CGG | + | chr7.3:84292172-84292191 | MS.gene97223:CDS | 50.0% | |
CAATCGCTTCATCGTCCTCT+TGG | - | chr7.3:84292711-84292730 | None:intergenic | 50.0% | |
CACAGAACACGTAGACGACA+AGG | - | chr7.3:84292636-84292655 | None:intergenic | 50.0% | |
CACTGCTAAAGGCGAAGAAC+CGG | + | chr7.3:84292534-84292553 | MS.gene97223:CDS | 50.0% | |
CCCTTGGCCGGAAAATTAAG+TGG | + | chr7.3:84292184-84292203 | MS.gene97223:CDS | 50.0% | |
CGCTGCAACGTAATTCTGAG+AGG | - | chr7.3:84290009-84290028 | None:intergenic | 50.0% | |
CTGGTGCAACGGAGTTTGTA+AGG | + | chr7.3:84292281-84292300 | MS.gene97223:CDS | 50.0% | |
GAAACCCAACGTCCACATAC+CGG | - | chr7.3:84291342-84291361 | None:intergenic | 50.0% | |
GAACCAACTTCGTTGGGAAC+AGG | + | chr7.3:84291107-84291126 | MS.gene97223:CDS | 50.0% | |
GAATGTTGAACCTGCCAAGG+AGG | + | chr7.3:84291496-84291515 | MS.gene97223:CDS | 50.0% | |
GATTCCGGTATGTGGACGTT+GGG | + | chr7.3:84291335-84291354 | MS.gene97223:CDS | 50.0% | |
GCTCCAAAGGTTGCTAAGGT+AGG | - | chr7.3:84291185-84291204 | None:intergenic | 50.0% | |
GCTGACATTGTTAGCAGCCT+CGG | - | chr7.3:84290665-84290684 | None:intergenic | 50.0% | |
GGAATGAATCCGGGAACCAA+TGG | + | chr7.3:84291924-84291943 | MS.gene97223:intron | 50.0% | |
GGTATGTGGACGTTGGGTTT+CGG | + | chr7.3:84291341-84291360 | MS.gene97223:CDS | 50.0% | |
GTCAGGATTGACAGTGTAGG+AGG | - | chr7.3:84289709-84289728 | None:intergenic | 50.0% | |
GTCTCGATACAGTCGGTGTA+TGG | + | chr7.3:84291770-84291789 | MS.gene97223:intron | 50.0% | |
GTCTCGTGTCTCGATACAGT+CGG | + | chr7.3:84291763-84291782 | MS.gene97223:intron | 50.0% | |
GTGGAATGTTGAACCTGCCA+AGG | + | chr7.3:84291493-84291512 | MS.gene97223:CDS | 50.0% | |
TCATGGACAAGGCAGCAACA+CGG | + | chr7.3:84291888-84291907 | MS.gene97223:intron | 50.0% | |
TCGTCTACGTGTTCTGTGCT+CGG | + | chr7.3:84292638-84292657 | MS.gene97223:CDS | 50.0% | |
TGTATGCAGATGTCACCAGC+AGG | + | chr7.3:84289675-84289694 | MS.gene97223:intron | 50.0% | |
TGTGAATCTCGGAAGCCAAG+AGG | + | chr7.3:84292693-84292712 | MS.gene97223:CDS | 50.0% | |
! | CTCGTAAAGTTGGTCCTCCT+TGG | - | chr7.3:84291513-84291532 | None:intergenic | 50.0% |
! | TAAAGTTGGTCCTCCTTGGC+AGG | - | chr7.3:84291509-84291528 | None:intergenic | 50.0% |
! | TTCTGTGCTCGGTGGTACAA+GGG | + | chr7.3:84292649-84292668 | MS.gene97223:CDS | 50.0% |
AACACGGACATGGTTGCTGC+TGG | - | chr7.3:84292112-84292131 | None:intergenic | 55.0% | |
ACACGGACATGGTTGCTGCT+GGG | - | chr7.3:84292111-84292130 | None:intergenic | 55.0% | |
ACATTGGCCCAATTCGGGAC+CGG | + | chr7.3:84290266-84290285 | MS.gene97223:intron | 55.0% | |
AGGCCTGTTCCCAACGAAGT+TGG | - | chr7.3:84291113-84291132 | None:intergenic | 55.0% | |
CTAAAGGCGAAGAACCGGGA+TGG | + | chr7.3:84292539-84292558 | MS.gene97223:CDS | 55.0% | |
GATGGTTGCAGCTGGTGCAA+CGG | + | chr7.3:84292270-84292289 | MS.gene97223:CDS | 55.0% | |
GCAGATGTCACCAGCAGGAT+CGG | + | chr7.3:84289680-84289699 | MS.gene97223:intron | 55.0% | |
GGCCATGAATCCGCCATCAA+AGG | + | chr7.3:84291539-84291558 | MS.gene97223:CDS | 55.0% | |
TCTACGTGTTCTGTGCTCGG+TGG | + | chr7.3:84292641-84292660 | MS.gene97223:CDS | 55.0% | |
! | GTTCTGTGCTCGGTGGTACA+AGG | + | chr7.3:84292648-84292667 | MS.gene97223:CDS | 55.0% |
!! | ACAAAGCCGCCATTGGTTCC+CGG | - | chr7.3:84291936-84291955 | None:intergenic | 55.0% |
!! | TAAGAGCACTTAGCGCTGCG+AGG | - | chr7.3:84292612-84292631 | None:intergenic | 55.0% |
CCTCGGCACTGTCTTGACGA+AGG | - | chr7.3:84290648-84290667 | None:intergenic | 60.0% | |
CCTTCGTCAAGACAGTGCCG+AGG | + | chr7.3:84290645-84290664 | MS.gene97223:CDS | 60.0% | |
AGGTCTTCGTCGCTGCCGCT+AGG | + | chr7.3:84291468-84291487 | MS.gene97223:CDS | 65.0% | |
GAGCACTTAGCGCTGCGAGG+AGG | - | chr7.3:84292609-84292628 | None:intergenic | 65.0% | |
TAGGAGGCGACCGATCCTGC+TGG | - | chr7.3:84289693-84289712 | None:intergenic | 65.0% | |
TCGTCGCTGCCGCTAGGAAG+TGG | + | chr7.3:84291474-84291493 | MS.gene97223:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 84289595 | 84292741 | 84289595 | ID=MS.gene97223 |
chr7.3 | mRNA | 84289595 | 84292741 | 84289595 | ID=MS.gene97223.t1;Parent=MS.gene97223 |
chr7.3 | exon | 84289595 | 84289597 | 84289595 | ID=MS.gene97223.t1.exon1;Parent=MS.gene97223.t1 |
chr7.3 | CDS | 84289595 | 84289597 | 84289595 | ID=cds.MS.gene97223.t1;Parent=MS.gene97223.t1 |
chr7.3 | exon | 84289684 | 84289746 | 84289684 | ID=MS.gene97223.t1.exon2;Parent=MS.gene97223.t1 |
chr7.3 | CDS | 84289684 | 84289746 | 84289684 | ID=cds.MS.gene97223.t1;Parent=MS.gene97223.t1 |
chr7.3 | exon | 84290390 | 84290471 | 84290390 | ID=MS.gene97223.t1.exon3;Parent=MS.gene97223.t1 |
chr7.3 | CDS | 84290390 | 84290471 | 84290390 | ID=cds.MS.gene97223.t1;Parent=MS.gene97223.t1 |
chr7.3 | exon | 84290575 | 84290792 | 84290575 | ID=MS.gene97223.t1.exon4;Parent=MS.gene97223.t1 |
chr7.3 | CDS | 84290575 | 84290792 | 84290575 | ID=cds.MS.gene97223.t1;Parent=MS.gene97223.t1 |
chr7.3 | exon | 84291026 | 84291594 | 84291026 | ID=MS.gene97223.t1.exon5;Parent=MS.gene97223.t1 |
chr7.3 | CDS | 84291026 | 84291594 | 84291026 | ID=cds.MS.gene97223.t1;Parent=MS.gene97223.t1 |
chr7.3 | exon | 84292144 | 84292398 | 84292144 | ID=MS.gene97223.t1.exon6;Parent=MS.gene97223.t1 |
chr7.3 | CDS | 84292144 | 84292398 | 84292144 | ID=cds.MS.gene97223.t1;Parent=MS.gene97223.t1 |
chr7.3 | exon | 84292507 | 84292741 | 84292507 | ID=MS.gene97223.t1.exon7;Parent=MS.gene97223.t1 |
chr7.3 | CDS | 84292507 | 84292741 | 84292507 | ID=cds.MS.gene97223.t1;Parent=MS.gene97223.t1 |
Gene Sequence |
Protein sequence |